BLASTX nr result
ID: Akebia25_contig00062827
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia25_contig00062827 (330 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 50 1e-06 ref|XP_004252466.1| PREDICTED: uncharacterized protein LOC101263... 54 4e-06 ref|XP_004240675.1| PREDICTED: uncharacterized protein LOC101260... 53 4e-06 ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268... 55 5e-06 ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258... 55 8e-06 >gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1231 Score = 50.4 bits (119), Expect(2) = 1e-06 Identities = 27/57 (47%), Positives = 34/57 (59%) Frame = -3 Query: 181 GGLIGALNLVDTGFFGNKFTWCNN*KESYRI*GRLDRAFVSSSWVLELGSPIVSHLP 11 G I L+L+D GF GNKFTW +ES + RLDR FV + L+ +VSHLP Sbjct: 63 GDWINELSLIDLGFKGNKFTWRRGRQESTVVAKRLDRVFVCAHARLKWQEAVVSHLP 119 Score = 27.7 bits (60), Expect(2) = 1e-06 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = -1 Query: 279 KGNLIIVGDFNIVLYPDERRVG 214 +G L+I GDFN +L+ DER G Sbjct: 30 EGPLLIGGDFNTILWVDERMGG 51 >ref|XP_004252466.1| PREDICTED: uncharacterized protein LOC101263798 [Solanum lycopersicum] Length = 358 Score = 53.5 bits (127), Expect(2) = 4e-06 Identities = 27/72 (37%), Positives = 39/72 (54%) Frame = -3 Query: 226 KKGGRYPNCAPMEDLGGLIGALNLVDTGFFGNKFTWCNN*KESYRI*GRLDRAFVSSSWV 47 K GGR N + D +I LVD G+ G FTWCN+ K++ RI RLDR + W+ Sbjct: 72 KLGGREYNISKSLDFISIIEYCGLVDMGYNGQPFTWCNHRKDAARIWKRLDRGLANDKWL 131 Query: 46 LELGSPIVSHLP 11 ++ ++ LP Sbjct: 132 EKMPHTNITRLP 143 Score = 22.7 bits (47), Expect(2) = 4e-06 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = -1 Query: 264 IVGDFNIVLYPDERRVGG 211 I+GDFN V+Y + ++GG Sbjct: 59 IIGDFN-VIYSTQEKLGG 75 >ref|XP_004240675.1| PREDICTED: uncharacterized protein LOC101260732 [Solanum lycopersicum] Length = 333 Score = 53.1 bits (126), Expect(2) = 4e-06 Identities = 27/71 (38%), Positives = 37/71 (52%) Frame = -3 Query: 226 KKGGRYPNCAPMEDLGGLIGALNLVDTGFFGNKFTWCNN*KESYRI*GRLDRAFVSSSWV 47 K GGR N + D + LVD G+ G FTWCN+ K RI RLDR + W+ Sbjct: 72 KLGGREYNISKSVDFISTMEHCGLVDLGYNGQPFTWCNHRKNDARIWKRLDRGLANDKWL 131 Query: 46 LELGSPIVSHL 14 ++ I++HL Sbjct: 132 DKMPHTIITHL 142 Score = 23.1 bits (48), Expect(2) = 4e-06 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = -1 Query: 264 IVGDFNIVLYPDERRVGG 211 I+GDFN V+Y + ++GG Sbjct: 59 IIGDFN-VIYSSQEKLGG 75 >ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum lycopersicum] Length = 1333 Score = 55.5 bits (132), Expect(2) = 5e-06 Identities = 27/72 (37%), Positives = 38/72 (52%) Frame = -3 Query: 226 KKGGRYPNCAPMEDLGGLIGALNLVDTGFFGNKFTWCNN*KESYRI*GRLDRAFVSSSWV 47 K GGR N + +I A LVD G+ G +TWCN+ K+ RI RLDR + W+ Sbjct: 91 KLGGRDYNINKSLEFINIIEACGLVDMGYHGQDYTWCNHRKDGARIWKRLDRGMTNDKWI 150 Query: 46 LELGSPIVSHLP 11 + ++HLP Sbjct: 151 ETIPHSSITHLP 162 Score = 20.4 bits (41), Expect(2) = 5e-06 Identities = 7/17 (41%), Positives = 11/17 (64%) Frame = -1 Query: 264 IVGDFNIVLYPDERRVG 214 I+GDFN++ E+ G Sbjct: 78 IIGDFNVITSTSEKLGG 94 >ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum lycopersicum] Length = 1454 Score = 55.5 bits (132), Expect = 8e-06 Identities = 28/72 (38%), Positives = 38/72 (52%) Frame = -3 Query: 226 KKGGRYPNCAPMEDLGGLIGALNLVDTGFFGNKFTWCNN*KESYRI*GRLDRAFVSSSWV 47 K GGR N + +I A LVD G+ G FTWCN+ ++ RI RLDR + WV Sbjct: 213 KLGGRDYNINKSLEFITIIEACGLVDMGYHGQNFTWCNHRRDGARIWKRLDRGMTNDKWV 272 Query: 46 LELGSPIVSHLP 11 + ++HLP Sbjct: 273 ETMPHSSITHLP 284