BLASTX nr result

ID: Akebia25_contig00062827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00062827
         (330 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    50   1e-06
ref|XP_004252466.1| PREDICTED: uncharacterized protein LOC101263...    54   4e-06
ref|XP_004240675.1| PREDICTED: uncharacterized protein LOC101260...    53   4e-06
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268...    55   5e-06
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258...    55   8e-06

>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 50.4 bits (119), Expect(2) = 1e-06
 Identities = 27/57 (47%), Positives = 34/57 (59%)
 Frame = -3

Query: 181 GGLIGALNLVDTGFFGNKFTWCNN*KESYRI*GRLDRAFVSSSWVLELGSPIVSHLP 11
           G  I  L+L+D GF GNKFTW    +ES  +  RLDR FV +   L+    +VSHLP
Sbjct: 63  GDWINELSLIDLGFKGNKFTWRRGRQESTVVAKRLDRVFVCAHARLKWQEAVVSHLP 119



 Score = 27.7 bits (60), Expect(2) = 1e-06
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -1

Query: 279 KGNLIIVGDFNIVLYPDERRVG 214
           +G L+I GDFN +L+ DER  G
Sbjct: 30  EGPLLIGGDFNTILWVDERMGG 51


>ref|XP_004252466.1| PREDICTED: uncharacterized protein LOC101263798 [Solanum
           lycopersicum]
          Length = 358

 Score = 53.5 bits (127), Expect(2) = 4e-06
 Identities = 27/72 (37%), Positives = 39/72 (54%)
 Frame = -3

Query: 226 KKGGRYPNCAPMEDLGGLIGALNLVDTGFFGNKFTWCNN*KESYRI*GRLDRAFVSSSWV 47
           K GGR  N +   D   +I    LVD G+ G  FTWCN+ K++ RI  RLDR   +  W+
Sbjct: 72  KLGGREYNISKSLDFISIIEYCGLVDMGYNGQPFTWCNHRKDAARIWKRLDRGLANDKWL 131

Query: 46  LELGSPIVSHLP 11
            ++    ++ LP
Sbjct: 132 EKMPHTNITRLP 143



 Score = 22.7 bits (47), Expect(2) = 4e-06
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -1

Query: 264 IVGDFNIVLYPDERRVGG 211
           I+GDFN V+Y  + ++GG
Sbjct: 59  IIGDFN-VIYSTQEKLGG 75


>ref|XP_004240675.1| PREDICTED: uncharacterized protein LOC101260732 [Solanum
           lycopersicum]
          Length = 333

 Score = 53.1 bits (126), Expect(2) = 4e-06
 Identities = 27/71 (38%), Positives = 37/71 (52%)
 Frame = -3

Query: 226 KKGGRYPNCAPMEDLGGLIGALNLVDTGFFGNKFTWCNN*KESYRI*GRLDRAFVSSSWV 47
           K GGR  N +   D    +    LVD G+ G  FTWCN+ K   RI  RLDR   +  W+
Sbjct: 72  KLGGREYNISKSVDFISTMEHCGLVDLGYNGQPFTWCNHRKNDARIWKRLDRGLANDKWL 131

Query: 46  LELGSPIVSHL 14
            ++   I++HL
Sbjct: 132 DKMPHTIITHL 142



 Score = 23.1 bits (48), Expect(2) = 4e-06
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -1

Query: 264 IVGDFNIVLYPDERRVGG 211
           I+GDFN V+Y  + ++GG
Sbjct: 59  IIGDFN-VIYSSQEKLGG 75


>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
           lycopersicum]
          Length = 1333

 Score = 55.5 bits (132), Expect(2) = 5e-06
 Identities = 27/72 (37%), Positives = 38/72 (52%)
 Frame = -3

Query: 226 KKGGRYPNCAPMEDLGGLIGALNLVDTGFFGNKFTWCNN*KESYRI*GRLDRAFVSSSWV 47
           K GGR  N     +   +I A  LVD G+ G  +TWCN+ K+  RI  RLDR   +  W+
Sbjct: 91  KLGGRDYNINKSLEFINIIEACGLVDMGYHGQDYTWCNHRKDGARIWKRLDRGMTNDKWI 150

Query: 46  LELGSPIVSHLP 11
             +    ++HLP
Sbjct: 151 ETIPHSSITHLP 162



 Score = 20.4 bits (41), Expect(2) = 5e-06
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 264 IVGDFNIVLYPDERRVG 214
           I+GDFN++    E+  G
Sbjct: 78  IIGDFNVITSTSEKLGG 94


>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
           lycopersicum]
          Length = 1454

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/72 (38%), Positives = 38/72 (52%)
 Frame = -3

Query: 226 KKGGRYPNCAPMEDLGGLIGALNLVDTGFFGNKFTWCNN*KESYRI*GRLDRAFVSSSWV 47
           K GGR  N     +   +I A  LVD G+ G  FTWCN+ ++  RI  RLDR   +  WV
Sbjct: 213 KLGGRDYNINKSLEFITIIEACGLVDMGYHGQNFTWCNHRRDGARIWKRLDRGMTNDKWV 272

Query: 46  LELGSPIVSHLP 11
             +    ++HLP
Sbjct: 273 ETMPHSSITHLP 284


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