BLASTX nr result

ID: Akebia25_contig00062777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00062777
         (433 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, part...    58   2e-06
ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcr...    57   3e-06

>ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, partial [Capsella rubella]
           gi|482569649|gb|EOA33837.1| hypothetical protein
           CARUB_v10021318mg, partial [Capsella rubella]
          Length = 290

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/56 (44%), Positives = 33/56 (58%)
 Frame = +2

Query: 11  GEHVEWYKIIWNKFRIPWHTFITWVVLRRSLQANENRCRRGLTLPSRCVLCCKSGE 178
           G  V W+K +W K RIP H FI+WVV+R  L   +     G+ +PS C+LC  S E
Sbjct: 108 GPLVPWFKSVWFKERIPKHAFISWVVIRNRLTTRDRLRGWGMNVPSECLLCTSSAE 163


>ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|98962153|gb|ABF59406.1| unknown protein [Arabidopsis
           thaliana] gi|332004916|gb|AED92299.1| RNA-directed DNA
           polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
          Length = 209

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/51 (49%), Positives = 32/51 (62%)
 Frame = +2

Query: 11  GEHVEWYKIIWNKFRIPWHTFITWVVLRRSLQANENRCRRGLTLPSRCVLC 163
           GE V+W+K IW K RIP H FI+WV +R  L   +     GL +PS C+LC
Sbjct: 139 GEKVDWHKAIWFKGRIPKHAFISWVNIRHRLPTRDKLLSWGLHVPSLCLLC 189


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