BLASTX nr result
ID: Akebia25_contig00062601
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00062601
(335 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein A... 59 1e-09
ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein A... 47 2e-07
ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein A... 47 2e-07
ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A... 49 4e-07
ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A... 49 4e-07
emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulga... 40 2e-06
emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulga... 44 2e-06
>ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 217
Score = 58.9 bits (141), Expect(2) = 1e-09
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +2
Query: 149 LFQEWNQNVFSGRKRYFWSITPFVVCWVTWRERNRRVFNGLSSNLQDIILEVLGLLFFWS 328
+ Q WN++ +G+ W I P + W W+ERN+R F G +N+Q I LGL +FW
Sbjct: 140 VLQCWNRDGNAGKNEKRWRIVPACIWWTIWKERNQRCFEGKQNNIQKIKTNCLGLYYFWC 199
Query: 329 K 331
K
Sbjct: 200 K 200
Score = 29.3 bits (64), Expect(2) = 1e-09
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = +3
Query: 21 CFMCKGCGESVSHILIHCPFVCKTW 95
C++C+ E+V+H+ +HC + + W
Sbjct: 96 CYLCEEQVETVNHLFLHCKWTDQLW 120
>ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 399
Score = 47.4 bits (111), Expect(2) = 2e-07
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 155 QEWNQNVFSGRKRYFWSITPFVVCWVTWRERNRRVFNGLSSNLQDIILEVLGLLFFW 325
+ W + + R W I P + W TW+ERN R F + +++Q + L + LL FW
Sbjct: 324 KSWEEAGVLAKDRTRWRIIPASIWWATWKERNSRCFESVENSMQKVKLNCILLLCFW 380
Score = 33.1 bits (74), Expect(2) = 2e-07
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 21 CFMCKGCGESVSHILIHCPFVCKTW 95
CF+C E+V+H+ +HC F + W
Sbjct: 278 CFLCGETSETVNHLFLHCKFTQQLW 302
>ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 323
Score = 47.4 bits (111), Expect(2) = 2e-07
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 155 QEWNQNVFSGRKRYFWSITPFVVCWVTWRERNRRVFNGLSSNLQDIILEVLGLLFFW 325
+ W + + R W I P + W TW+ERN R F + +++Q + L + LL FW
Sbjct: 248 KSWEEAGVLAKDRTRWRIIPASIWWATWKERNSRCFESVENSMQKVKLNCILLLCFW 304
Score = 33.1 bits (74), Expect(2) = 2e-07
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 21 CFMCKGCGESVSHILIHCPFVCKTW 95
CF+C E+V+H+ +HC F + W
Sbjct: 202 CFLCGETSETVNHLFLHCKFTQQLW 226
>ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 556
Score = 49.3 bits (116), Expect(2) = 4e-07
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +2
Query: 161 WNQNVFSGRKRYFWSITPFVVCWVTWRERNRRVFNGLSSNLQDIILEVLGLLFFW 325
W + + R W I P + W W+ERN R F G+ +++QD+ L + LL FW
Sbjct: 483 WEEAGALAKDRTRWRIIPASIWWAIWKERNSRCFEGIENSVQDVKLNCILLLCFW 537
Score = 30.4 bits (67), Expect(2) = 4e-07
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 21 CFMCKGCGESVSHILIHCPFVCKTW 95
CF+C E+V+H+ +HC + + W
Sbjct: 435 CFLCGETLETVNHLFLHCKYTRQLW 459
>ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 450
Score = 49.3 bits (116), Expect(2) = 4e-07
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +2
Query: 161 WNQNVFSGRKRYFWSITPFVVCWVTWRERNRRVFNGLSSNLQDIILEVLGLLFFW 325
W + + R W I P + W W+ERN R F G+ +++QD+ L + LL FW
Sbjct: 377 WEEAGALAKDRTRWRIIPASIWWAIWKERNSRCFEGIENSVQDVKLNCILLLCFW 431
Score = 30.4 bits (67), Expect(2) = 4e-07
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 21 CFMCKGCGESVSHILIHCPFVCKTW 95
CF+C E+V+H+ +HC + + W
Sbjct: 329 CFLCGETLETVNHLFLHCKYTRQLW 353
>emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1381
Score = 39.7 bits (91), Expect(2) = 2e-06
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 21 CFMCKGCGESVSHILIHCPFVCKTWVH*LG 110
C MC G E+ H+L+HCPF W+ LG
Sbjct: 1092 CIMCNGAPETSDHLLLHCPFASSIWLWWLG 1121
Score = 37.7 bits (86), Expect(2) = 2e-06
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 152 FQEWNQNVFSGRKRYFWSITPFVVCWVTWRERNRRVFNGL---SSNLQDIIL 298
F++W + + R W ++ W W+ERN R+F G+ S+ LQD+++
Sbjct: 1137 FEQWYCHKKNPFFRKVWCSIFSIIIWTIWKERNARIFRGISCSSNKLQDLVI 1188
>emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1380
Score = 43.5 bits (101), Expect(2) = 2e-06
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +2
Query: 149 LFQEWNQNVFSGRKRYFWSITPFVVCWVTWRERNRRVFNGLS---SNLQDIILEVLG 310
LF +W + + + W+ T F++ W W+ERN R+F S S+L D+IL LG
Sbjct: 1134 LFDQWLSPIKTPFFKKVWAATFFIISWSIWKERNSRIFENTSSPPSSLHDLILLRLG 1190
Score = 33.9 bits (76), Expect(2) = 2e-06
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 15 NFCFMCKGCGESVSHILIHCPFVCKTW 95
N C +C E +H+L+HCPF W
Sbjct: 1088 NICVLCNTSPEQHNHLLLHCPFSLSLW 1114