BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00062227
         (415 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_734078.1| methyltransferase/protease/helicase [oat blue d...   113   2e-23
ref|NP_044447.1| replicase-associated polyprotein [Oat blue dwar...   113   2e-23
ref|YP_224292.1| methyltransferase/protease/helicase [Citrus sud...   113   3e-23
ref|YP_224218.1| replicase-associated polyprotein [Citrus sudden...   113   3e-23
gb|ADD13602.1| replicase-associated polyprotein [Oat blue dwarf ...   110   3e-22
gb|AAW33732.1| polyprotein [Grapevine rupestris vein feathering ...   109   3e-22
ref|YP_003475889.1| replicase-associated polyprotein [Olive late...   108   1e-21
gb|AEE61366.1| polyprotein, partial [Switchgrass mosaic virus]        105   5e-21
gb|ABA54133.1| polyprotein [Citrus sudden death-associated virus]     105   9e-21
ref|YP_004464924.1| replicase [Asclepias asymptomatic virus] gi|...   104   1e-20
gb|ACV53023.1| polyprotein [Blackberry virus S]                       104   1e-20
ref|YP_004464920.1| polyprotein [Switchgrass mosaic virus] gi|33...   104   1e-20
emb|CBH31042.1| RNA-dependent RNA polymerase [Chiltepin yellow m...   104   1e-20
ref|YP_003620401.1| RNA-dependent RNA polymerase [Chiltepin yell...   104   1e-20
ref|YP_008318042.1| putative polyprotein [Tomato blistering mosa...   103   2e-20
ref|YP_007517183.1| viral replication protein [Andean potato mil...   103   2e-20
ref|NP_734075.1| NTPase/helicase [maize rayado fino virus]            100   2e-19
ref|NP_115454.1| polyprotein [Maize rayado fino virus] gi|819647...   100   2e-19
ref|YP_007517180.1| viral replication protein [Andean potato lat...   100   3e-19
ref|NP_542612.1| replicase [Grapevine fleck virus] gi|81956065|s...   100   3e-19

>ref|NP_734078.1| methyltransferase/protease/helicase [oat blue dwarf virus]
          Length = 1212

 Score =  113 bits (283), Expect = 2e-23
 Identities = 60/136 (44%), Positives = 78/136 (57%)
 Frame = +2

Query: 2   TSLSQNTRDRLVPLAAYHSLRAYVMAVRTLRTTDPAGFVRTQSTKPEFAWVTAEAWDSLQ 181
           +SL Q+ R RLVP   Y++L  YV AVRTLR TDPAGFVRTQ +KPE+AWVT+ AWD+L 
Sbjct: 296 SSLHQDLRHRLVPEDVYNALFLYVRAVRTLRVTDPAGFVRTQCSKPEYAWVTSSAWDNLA 355

Query: 182 NFALLTCNQRPAVSYLTFASSFARVKHWXXXXXXXXXXXXXXXXXXVSFTSVKVAHYCST 361
           +FALLT   RP  S+  F+S+F R++HW                   S     +    S 
Sbjct: 356 HFALLTAPHRPRTSFYLFSSTFQRLEHWVRHHTFLLAGLTTAFALPPSAWLANLVARASA 415

Query: 362 RQIESLILFGRQIVRP 409
             I+ L L  R ++ P
Sbjct: 416 SHIQGLALARRWLITP 431


>ref|NP_044447.1| replicase-associated polyprotein [Oat blue dwarf virus]
           gi|1843580|gb|AAC57874.1| replicase-associated
           polyprotein [oat blue dwarf virus]
          Length = 2066

 Score =  113 bits (283), Expect = 2e-23
 Identities = 60/136 (44%), Positives = 78/136 (57%)
 Frame = +2

Query: 2   TSLSQNTRDRLVPLAAYHSLRAYVMAVRTLRTTDPAGFVRTQSTKPEFAWVTAEAWDSLQ 181
           +SL Q+ R RLVP   Y++L  YV AVRTLR TDPAGFVRTQ +KPE+AWVT+ AWD+L 
Sbjct: 296 SSLHQDLRHRLVPEDVYNALFLYVRAVRTLRVTDPAGFVRTQCSKPEYAWVTSSAWDNLA 355

Query: 182 NFALLTCNQRPAVSYLTFASSFARVKHWXXXXXXXXXXXXXXXXXXVSFTSVKVAHYCST 361
           +FALLT   RP  S+  F+S+F R++HW                   S     +    S 
Sbjct: 356 HFALLTAPHRPRTSFYLFSSTFQRLEHWVRHHTFLLAGLTTAFALPPSAWLANLVARASA 415

Query: 362 RQIESLILFGRQIVRP 409
             I+ L L  R ++ P
Sbjct: 416 SHIQGLALARRWLITP 431


>ref|YP_224292.1| methyltransferase/protease/helicase [Citrus sudden death-associated
           virus]
          Length = 1371

 Score =  113 bits (282), Expect = 3e-23
 Identities = 54/87 (62%), Positives = 64/87 (73%)
 Frame = +2

Query: 5   SLSQNTRDRLVPLAAYHSLRAYVMAVRTLRTTDPAGFVRTQSTKPEFAWVTAEAWDSLQN 184
           SLSQ+ RDRLVP   Y +L  YV AVRTLR TDPAGFVRTQ +KPE++WVT+ AWD+L +
Sbjct: 364 SLSQSVRDRLVPADVYQALFIYVRAVRTLRVTDPAGFVRTQISKPEYSWVTSSAWDNLAH 423

Query: 185 FALLTCNQRPAVSYLTFASSFARVKHW 265
           FAL T   RP  +Y  F S+ ARV HW
Sbjct: 424 FALATAPHRPHTTYFLFNSTAARVAHW 450


>ref|YP_224218.1| replicase-associated polyprotein [Citrus sudden death-associated
           virus] gi|59609791|gb|AAW88343.1| replicase-associated
           polyprotein [Citrus sudden death-associated virus]
          Length = 2188

 Score =  113 bits (282), Expect = 3e-23
 Identities = 54/87 (62%), Positives = 64/87 (73%)
 Frame = +2

Query: 5   SLSQNTRDRLVPLAAYHSLRAYVMAVRTLRTTDPAGFVRTQSTKPEFAWVTAEAWDSLQN 184
           SLSQ+ RDRLVP   Y +L  YV AVRTLR TDPAGFVRTQ +KPE++WVT+ AWD+L +
Sbjct: 364 SLSQSVRDRLVPADVYQALFIYVRAVRTLRVTDPAGFVRTQISKPEYSWVTSSAWDNLAH 423

Query: 185 FALLTCNQRPAVSYLTFASSFARVKHW 265
           FAL T   RP  +Y  F S+ ARV HW
Sbjct: 424 FALATAPHRPHTTYFLFNSTAARVAHW 450


>gb|ADD13602.1| replicase-associated polyprotein [Oat blue dwarf virus]
          Length = 2067

 Score =  110 bits (274), Expect = 3e-22
 Identities = 52/88 (59%), Positives = 66/88 (75%)
 Frame = +2

Query: 2   TSLSQNTRDRLVPLAAYHSLRAYVMAVRTLRTTDPAGFVRTQSTKPEFAWVTAEAWDSLQ 181
           +SL Q+ R RLVP   Y++L  YV AVRTLR TDPAGFVRTQ +K E+AWVT+ AWD+L 
Sbjct: 296 SSLHQDLRHRLVPEDVYNALFLYVRAVRTLRVTDPAGFVRTQCSKSEYAWVTSSAWDNLA 355

Query: 182 NFALLTCNQRPAVSYLTFASSFARVKHW 265
           +FALLT   RP  S+  F+S+F R++HW
Sbjct: 356 HFALLTAPHRPRTSFYLFSSTFQRLEHW 383


>gb|AAW33732.1| polyprotein [Grapevine rupestris vein feathering virus]
          Length = 2068

 Score =  109 bits (273), Expect = 3e-22
 Identities = 51/88 (57%), Positives = 63/88 (71%)
 Frame = +2

Query: 2   TSLSQNTRDRLVPLAAYHSLRAYVMAVRTLRTTDPAGFVRTQSTKPEFAWVTAEAWDSLQ 181
           +S+ Q+ R RLVP A YHSL  YV AVRTLR TDP G+VRTQS KPE+AWVT+ AWD+LQ
Sbjct: 405 SSIQQSLRHRLVPSAVYHSLFIYVRAVRTLRQTDPQGYVRTQSNKPEYAWVTSAAWDNLQ 464

Query: 182 NFALLTCNQRPAVSYLTFASSFARVKHW 265
           +F   T + R   +Y  F S+ AR+ HW
Sbjct: 465 HFVTETAHHRQRTTYYLFNSTLARLSHW 492


>ref|YP_003475889.1| replicase-associated polyprotein [Olive latent virus 3]
           gi|289467899|gb|ACN94861.2| replicase-associated
           polyprotein [Olive latent virus 3]
          Length = 2000

 Score =  108 bits (269), Expect = 1e-21
 Identities = 57/135 (42%), Positives = 76/135 (56%)
 Frame = +2

Query: 8   LSQNTRDRLVPLAAYHSLRAYVMAVRTLRTTDPAGFVRTQSTKPEFAWVTAEAWDSLQNF 187
           L Q+ R RLVP   Y S+  YV AVRTLR TDP+G+VRTQS+KPE++WVT  AWD+L NF
Sbjct: 403 LQQDLRHRLVPTRVYESIFVYVRAVRTLRVTDPSGYVRTQSSKPEYSWVTTAAWDNLANF 462

Query: 188 ALLTCNQRPAVSYLTFASSFARVKHWXXXXXXXXXXXXXXXXXXVSFTSVKVAHYCSTRQ 367
           ALLTC  RP   Y  + S+  R+  W                     +S  +A      +
Sbjct: 463 ALLTCAHRPRARYYLYWSTLDRLMGWIRAHKLALLTASTPLASLGLASSALLACRPFWMR 522

Query: 368 IESLILFGRQIVRPS 412
           ++SL L  R +++PS
Sbjct: 523 LDSLQLLNRWVIKPS 537


>gb|AEE61366.1| polyprotein, partial [Switchgrass mosaic virus]
          Length = 684

 Score =  105 bits (263), Expect = 5e-21
 Identities = 53/87 (60%), Positives = 61/87 (70%)
 Frame = +2

Query: 5   SLSQNTRDRLVPLAAYHSLRAYVMAVRTLRTTDPAGFVRTQSTKPEFAWVTAEAWDSLQN 184
           SL Q+ R RLVP   Y +L  YV AVRTLR TDPAGFVRTQ  KPE++WVT+ AWD+LQ+
Sbjct: 124 SLHQDLRHRLVPRRVYDALFNYVRAVRTLRVTDPAGFVRTQVGKPEYSWVTSSAWDNLQH 183

Query: 185 FALLTCNQRPAVSYLTFASSFARVKHW 265
           FAL T   RP  S+  F S  ARV HW
Sbjct: 184 FALQTAAVRPNTSHPLFQSPLARVAHW 210


>gb|ABA54133.1| polyprotein [Citrus sudden death-associated virus]
          Length = 2189

 Score =  105 bits (261), Expect = 9e-21
 Identities = 51/87 (58%), Positives = 59/87 (67%)
 Frame = +2

Query: 5   SLSQNTRDRLVPLAAYHSLRAYVMAVRTLRTTDPAGFVRTQSTKPEFAWVTAEAWDSLQN 184
           SLSQ  RDRLVP   Y +L  YV AVRTLR TDPAGFVRTQ +KPE++WVT+  WD+   
Sbjct: 364 SLSQGVRDRLVPADVYQALFIYVRAVRTLRVTDPAGFVRTQISKPEYSWVTSFRWDNFPP 423

Query: 185 FALLTCNQRPAVSYLTFASSFARVKHW 265
            AL T   RP  +Y  F S+ ARV HW
Sbjct: 424 LALATAPHRPHTTYFLFNSTAARVSHW 450


>ref|YP_004464924.1| replicase [Asclepias asymptomatic virus]
           gi|332112781|gb|AEE02009.1| replicase [Asclepias
           asymptomatic virus]
          Length = 1808

 Score =  104 bits (260), Expect = 1e-20
 Identities = 53/93 (56%), Positives = 63/93 (67%), Gaps = 5/93 (5%)
 Frame = +2

Query: 2   TSLSQNTRDRLVPLAAYHSLRAYVMAVRTLRTTDPAGFVRTQSTKPEFAWVTAEAWDSLQ 181
           T LSQ  R RL+P  AY +L  Y  AVRTLRT+DPAGFVRTQS KPE++WVT+ AWD+LQ
Sbjct: 291 TFLSQPLRHRLIPKKAYDALFTYTRAVRTLRTSDPAGFVRTQSNKPEYSWVTSNAWDNLQ 350

Query: 182 NFALLTCNQRPAVSYLTFASSFARVK-----HW 265
            FALL C  RP V Y    + F ++K     HW
Sbjct: 351 TFALLNCAIRPNVVYNFLRNPFQKLKIYLSQHW 383


>gb|ACV53023.1| polyprotein [Blackberry virus S]
          Length = 2035

 Score =  104 bits (260), Expect = 1e-20
 Identities = 48/88 (54%), Positives = 64/88 (72%)
 Frame = +2

Query: 2   TSLSQNTRDRLVPLAAYHSLRAYVMAVRTLRTTDPAGFVRTQSTKPEFAWVTAEAWDSLQ 181
           +SL+Q+ R RLVP   Y ++  YV  VRTLR TDPAGF+RTQS+K E +WVT+ AWD+L 
Sbjct: 316 SSLNQDVRHRLVPKKVYDAVFLYVRTVRTLRVTDPAGFIRTQSSKAEHSWVTSFAWDNLA 375

Query: 182 NFALLTCNQRPAVSYLTFASSFARVKHW 265
           +FAL T + RP  +Y  F+S+ AR+ HW
Sbjct: 376 HFALQTASHRPRTTYYLFSSALARLSHW 403


>ref|YP_004464920.1| polyprotein [Switchgrass mosaic virus] gi|332672309|gb|AEE25899.3|
           polyprotein [Switchgrass mosaic virus]
          Length = 2061

 Score =  104 bits (259), Expect = 1e-20
 Identities = 52/87 (59%), Positives = 61/87 (70%)
 Frame = +2

Query: 5   SLSQNTRDRLVPLAAYHSLRAYVMAVRTLRTTDPAGFVRTQSTKPEFAWVTAEAWDSLQN 184
           SL Q+ R RLVP   Y +L  YV AVRTLR TDPA FVRTQ +KPE++WVT+ AWD+LQ+
Sbjct: 283 SLHQDLRHRLVPRRVYDALFNYVRAVRTLRVTDPADFVRTQVSKPEYSWVTSSAWDNLQH 342

Query: 185 FALLTCNQRPAVSYLTFASSFARVKHW 265
           FAL T   RP  S+  F S  ARV HW
Sbjct: 343 FALQTAAVRPNTSHPLFQSPLARVAHW 369


>emb|CBH31042.1| RNA-dependent RNA polymerase [Chiltepin yellow mosaic virus]
          Length = 1881

 Score =  104 bits (259), Expect = 1e-20
 Identities = 54/93 (58%), Positives = 62/93 (66%), Gaps = 5/93 (5%)
 Frame = +2

Query: 2   TSLSQNTRDRLVPLAAYHSLRAYVMAVRTLRTTDPAGFVRTQSTKPEFAWVTAEAWDSLQ 181
           T L Q  R RLVP A Y++L  Y  AVRTLRT+DPAGFVRTQS KPE++WVT  AWD+LQ
Sbjct: 308 TFLRQPLRHRLVPSAVYNALFTYTRAVRTLRTSDPAGFVRTQSNKPEYSWVTPSAWDNLQ 367

Query: 182 NFALLTCNQRPAVSYLTFASSFARVK-----HW 265
            FALL    RP V Y  F+S   R+K     HW
Sbjct: 368 TFALLNSPHRPQVCYHFFSSPIDRLKLYFGQHW 400


>ref|YP_003620401.1| RNA-dependent RNA polymerase [Chiltepin yellow mosaic virus]
           gi|295808365|emb|CBH31039.1| RNA-dependent RNA
           polymerase [Chiltepin yellow mosaic virus]
          Length = 1881

 Score =  104 bits (259), Expect = 1e-20
 Identities = 54/93 (58%), Positives = 62/93 (66%), Gaps = 5/93 (5%)
 Frame = +2

Query: 2   TSLSQNTRDRLVPLAAYHSLRAYVMAVRTLRTTDPAGFVRTQSTKPEFAWVTAEAWDSLQ 181
           T L Q  R RLVP A Y++L  Y  AVRTLRT+DPAGFVRTQS KPE++WVT  AWD+LQ
Sbjct: 308 TFLRQPLRHRLVPSAVYNALFTYTRAVRTLRTSDPAGFVRTQSNKPEYSWVTPSAWDNLQ 367

Query: 182 NFALLTCNQRPAVSYLTFASSFARVK-----HW 265
            FALL    RP V Y  F+S   R+K     HW
Sbjct: 368 TFALLNSPHRPQVCYHFFSSPIDRLKLHFGQHW 400


>ref|YP_008318042.1| putative polyprotein [Tomato blistering mosaic virus]
           gi|523788730|gb|AGQ80925.1| putative polyprotein [Tomato
           blistering mosaic virus]
          Length = 1808

 Score =  103 bits (258), Expect = 2e-20
 Identities = 53/93 (56%), Positives = 62/93 (66%), Gaps = 5/93 (5%)
 Frame = +2

Query: 2   TSLSQNTRDRLVPLAAYHSLRAYVMAVRTLRTTDPAGFVRTQSTKPEFAWVTAEAWDSLQ 181
           T L Q  R RLVPL  Y++L  Y  AVRTLRT+DPAGFVRTQS KPE++WVT  AWD+LQ
Sbjct: 322 TFLQQPLRHRLVPLQVYNALFTYTRAVRTLRTSDPAGFVRTQSNKPEYSWVTPNAWDNLQ 381

Query: 182 NFALLTCNQRPAVSYLTFASSFARVK-----HW 265
            FAL+    RP V Y  F + F R+K     HW
Sbjct: 382 TFALMNAPIRPRVFYEFFLNPFQRLKLHFRQHW 414


>ref|YP_007517183.1| viral replication protein [Andean potato mild mosaic virus]
           gi|452883297|gb|AGG15961.1| viral replication protein
           [Andean potato mild mosaic virus]
          Length = 1810

 Score =  103 bits (258), Expect = 2e-20
 Identities = 52/93 (55%), Positives = 64/93 (68%), Gaps = 5/93 (5%)
 Frame = +2

Query: 2   TSLSQNTRDRLVPLAAYHSLRAYVMAVRTLRTTDPAGFVRTQSTKPEFAWVTAEAWDSLQ 181
           T L+Q  R RL+P A Y++L  Y  AVRTLRT+DPAGFVRTQS K E++WVT  AWD+LQ
Sbjct: 308 TFLNQPLRHRLIPTAVYNALFTYTRAVRTLRTSDPAGFVRTQSNKAEYSWVTPNAWDNLQ 367

Query: 182 NFALLTCNQRPAVSYLTFASSFARV-----KHW 265
            FALL    RP+VSY  F S F ++     +HW
Sbjct: 368 TFALLNSPHRPSVSYQFFLSPFKQLQLHFSQHW 400


>ref|NP_734075.1| NTPase/helicase [maize rayado fino virus]
          Length = 1194

 Score =  100 bits (250), Expect = 2e-19
 Identities = 52/87 (59%), Positives = 61/87 (70%)
 Frame = +2

Query: 5   SLSQNTRDRLVPLAAYHSLRAYVMAVRTLRTTDPAGFVRTQSTKPEFAWVTAEAWDSLQN 184
           SL Q+ R RLVP   Y +L  YV AVR LR TDPAGFVRTQ  KPE++WVT+ AWD+LQ+
Sbjct: 283 SLHQDLRHRLVPRKVYDALFNYVRAVR-LRVTDPAGFVRTQVGKPEYSWVTSSAWDNLQH 341

Query: 185 FALLTCNQRPAVSYLTFASSFARVKHW 265
           FAL T   RP  S+  F S FAR+ HW
Sbjct: 342 FALQTAAVRPNTSHPLFQSPFARLSHW 368


>ref|NP_115454.1| polyprotein [Maize rayado fino virus]
           gi|81964785|sp|Q91TW9.1|POLG_MRFVC RecName: Full=Genome
           polyprotein; Includes: RecName: Full=RNA-directed RNA
           polymerase; Includes: RecName: Full=Helicase; Includes:
           RecName: Full=Methyltransferase; Contains: RecName:
           Full=RNA replication protein; Contains: RecName:
           Full=Capsid protein CP1; Short=CP1; AltName: Full=Coat
           protein gi|14030260|gb|AAK52838.1|AF265566_1 polyprotein
           [maize rayado fino virus]
          Length = 2027

 Score =  100 bits (250), Expect = 2e-19
 Identities = 52/87 (59%), Positives = 61/87 (70%)
 Frame = +2

Query: 5   SLSQNTRDRLVPLAAYHSLRAYVMAVRTLRTTDPAGFVRTQSTKPEFAWVTAEAWDSLQN 184
           SL Q+ R RLVP   Y +L  YV AVR LR TDPAGFVRTQ  KPE++WVT+ AWD+LQ+
Sbjct: 283 SLHQDLRHRLVPRKVYDALFNYVRAVR-LRVTDPAGFVRTQVGKPEYSWVTSSAWDNLQH 341

Query: 185 FALLTCNQRPAVSYLTFASSFARVKHW 265
           FAL T   RP  S+  F S FAR+ HW
Sbjct: 342 FALQTAAVRPNTSHPLFQSPFARLSHW 368


>ref|YP_007517180.1| viral replication protein [Andean potato latent virus]
           gi|452883301|gb|AGG15964.1| viral replication protein
           [Andean potato latent virus]
          Length = 1831

 Score =  100 bits (248), Expect = 3e-19
 Identities = 51/93 (54%), Positives = 62/93 (66%), Gaps = 5/93 (5%)
 Frame = +2

Query: 2   TSLSQNTRDRLVPLAAYHSLRAYVMAVRTLRTTDPAGFVRTQSTKPEFAWVTAEAWDSLQ 181
           T L+Q  R RLVPL  Y++L  Y  AVRTLRT+DPAGFVRTQS K E++WVT  AWD+LQ
Sbjct: 322 TFLNQPLRHRLVPLQVYNALFTYTRAVRTLRTSDPAGFVRTQSNKAEYSWVTPNAWDNLQ 381

Query: 182 NFALLTCNQRPAVSYLTFASSFARVK-----HW 265
            FAL+    RP V Y  F + F ++K     HW
Sbjct: 382 TFALMNAPIRPRVFYEFFLNPFQKLKLHFRQHW 414


>ref|NP_542612.1| replicase [Grapevine fleck virus]
           gi|81956065|sp|Q8UZB6.1|RDRP_GFKVM RecName: Full=RNA
           replication protein; Includes: RecName:
           Full=RNA-directed RNA polymerase; Includes: RecName:
           Full=Helicase; Includes: RecName: Full=Methyltransferase
           gi|18073602|emb|CAC84400.1| replicase [Grapevine fleck
           virus]
          Length = 1949

 Score =  100 bits (248), Expect = 3e-19
 Identities = 51/81 (62%), Positives = 54/81 (66%)
 Frame = +2

Query: 23  RDRLVPLAAYHSLRAYVMAVRTLRTTDPAGFVRTQSTKPEFAWVTAEAWDSLQNFALLTC 202
           R RLVP     SL  YV AVRTLRTTDPAGF+RTQS K EF WVTAEAWD L  FALLT 
Sbjct: 404 RSRLVPRDVCESLFVYVRAVRTLRTTDPAGFIRTQSNKAEFDWVTAEAWDHLAQFALLTA 463

Query: 203 NQRPAVSYLTFASSFARVKHW 265
             RP   +L   S  A V+HW
Sbjct: 464 PVRPNTYFLPLLSPLAVVRHW 484