BLASTX nr result

ID: Akebia25_contig00061434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00061434
         (553 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB94971.1| ATP-dependent DNA helicase Q-like 5 [Morus notabi...    72   7e-11
ref|XP_004135514.1| PREDICTED: ATP-dependent DNA helicase Q-like...    62   7e-08
ref|XP_002266225.1| PREDICTED: ATP-dependent DNA helicase Q-like...    58   1e-06

>gb|EXB94971.1| ATP-dependent DNA helicase Q-like 5 [Morus notabilis]
          Length = 990

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 59/153 (38%), Positives = 82/153 (53%), Gaps = 9/153 (5%)
 Frame = -1

Query: 433 ADPSEDNPIR-NTFPSTE--FSNLSG-LSVQIR-HGSDRNREVS-VSNSIENLPANFCSK 272
           + PS+ N  R +  P++E  F   S  L  QIR   SD+NR+VS V  S+E LPA F SK
Sbjct: 94  SSPSDANRTRIDPVPASEDAFPTFSANLPFQIRSRPSDQNRDVSAVDRSLETLPAGFFSK 153

Query: 271 STFFSKIQRPYSIPESVEKDPLPPSVSIPQPKIGSHEDVEIVRNSSISITPKTIREDVRS 92
           S  FSKI+R     + VE DP P S  IP PK    +++ +   S+    P+ + ++   
Sbjct: 154 SASFSKIRRSTLNFDCVEDDPSPSSAPIPPPKA---DEITVPECSAAGWLPEELDDEAAV 210

Query: 91  G---DSVKSGRKHPNSIGSSVDPLPSKRSKPIS 2
           G    S K  +KH N IGS+V PLP  + +  S
Sbjct: 211 GYGISSAKVAKKHSNLIGSNV-PLPPVKFRKCS 242


>ref|XP_004135514.1| PREDICTED: ATP-dependent DNA helicase Q-like 5-like [Cucumis
           sativus] gi|449495007|ref|XP_004159708.1| PREDICTED:
           ATP-dependent DNA helicase Q-like 5-like [Cucumis
           sativus]
          Length = 952

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
 Frame = -1

Query: 427 PSEDNPIRNTFPSTEFSNLSGLSVQIRHGSDRNREVSVSNSIENLPANFCSKSTFFSKIQ 248
           PS D       PS +++ L  L  QIR  SD++R +S S S+E LPA F SKS  F K +
Sbjct: 69  PSSDVKHSEKEPSPDWTPLPTLPYQIRRASDQSRAISSSESMEMLPAGFFSKSPSFMKFR 128

Query: 247 RPYSIPESVEKDPLPPSVSIPQPKIGSHEDVEIVRNSSISITPKTIREDVRS-GDSVKSG 71
           R      S+  +    + ++ +P   ++ + EI   +  S     +++DV S G+ VKS 
Sbjct: 129 R-----SSLNFETSEDNRTLLEPIQLNNAETEI---AGCSTADWGMKDDVCSLGNRVKSV 180

Query: 70  RKHPNSIGSSVDPLPSKRSK 11
           R HPN IG+ V   P K  K
Sbjct: 181 RTHPNLIGTHVSVPPIKVRK 200


>ref|XP_002266225.1| PREDICTED: ATP-dependent DNA helicase Q-like 5-like [Vitis
           vinifera]
          Length = 941

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
 Frame = -1

Query: 340 SDRNREVSVSNSIENLPANFCSKSTFFSKIQRPYSIPESVEKDPLPPSVSIPQPKIGSHE 161
           S +N  +   NS E LPA + SK   FSK+Q+P   P+ VE +P                
Sbjct: 108 SGQNHPIYAVNSFETLPAGYFSKVASFSKLQKPCPKPDPVENEP---------------- 151

Query: 160 DVEIVRNSSISITPKTIR--EDVRSGDSVKSGRKHPNSIGSSVDPLPSKRSK 11
                 + +  +TPK     E V +G +VK  +KH N IGS V+P P KR K
Sbjct: 152 ------SLASGLTPKQPHACEAVSTGSAVKFVKKHCNLIGSDVNPKPVKRPK 197


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