BLASTX nr result
ID: Akebia25_contig00061337
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia25_contig00061337 (334 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulga... 57 2e-06 ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597... 57 3e-06 ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A... 48 8e-06 ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A... 48 8e-06 >emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1381 Score = 57.4 bits (137), Expect = 2e-06 Identities = 24/62 (38%), Positives = 40/62 (64%), Gaps = 2/62 (3%) Frame = +3 Query: 30 VLLHCPFASRVWSHFLGLFGVEGCLPWSVKEVFEAWALFRSST--RLLWSVIPFAICWGL 203 +LLHCP AS++WS ++GL+ ++ P S++E F W ++S + +WS + F I W L Sbjct: 1103 LLLHCPVASQIWSWWIGLWRIKWAFPLSLREAFTQWFWPKNSPFFKKVWSAVFFIIVWTL 1162 Query: 204 WR 209 W+ Sbjct: 1163 WK 1164 >ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597191 [Solanum tuberosum] Length = 305 Score = 56.6 bits (135), Expect = 3e-06 Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 2/61 (3%) Frame = +3 Query: 30 VLLHCPFASRVWSHFLGLFGVEGCLPWSVKEVFEAWALFR--SSTRLLWSVIPFAICWGL 203 +LLHC AS +WS F L G+ P +VK+ +E+W+L++ + + +W +IP I W + Sbjct: 194 LLLHCEVASELWSMFFCLSGINWTTPLTVKDAYESWSLWKVDKAIKKIWIMIPACIFWSI 253 Query: 204 W 206 W Sbjct: 254 W 254 >ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum tuberosum] Length = 556 Score = 47.8 bits (112), Expect(2) = 8e-06 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Frame = +3 Query: 30 VLLHCPFASRVWSHFLGLFGVEGCLPWSVKEVFEAW----ALFRSSTRLLWSVIPFAICW 197 + LHC + ++W FL L G+ +P V E +W AL + TR W +IP +I W Sbjct: 448 LFLHCKYTRQLWRIFLSLKGISWTMPRRVTEALYSWEEAGALAKDRTR--WRIIPASIWW 505 Query: 198 GLWR 209 +W+ Sbjct: 506 AIWK 509 Score = 27.3 bits (59), Expect(2) = 8e-06 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +2 Query: 206 EERNSRVFGGTSETGDNNILTISGLLSFWCKVL 304 +ERNSR F G + + L LL FWC L Sbjct: 509 KERNSRCFEGIENSVQDVKLNCILLLCFWCNQL 541 >ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum tuberosum] Length = 450 Score = 47.8 bits (112), Expect(2) = 8e-06 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Frame = +3 Query: 30 VLLHCPFASRVWSHFLGLFGVEGCLPWSVKEVFEAW----ALFRSSTRLLWSVIPFAICW 197 + LHC + ++W FL L G+ +P V E +W AL + TR W +IP +I W Sbjct: 342 LFLHCKYTRQLWRIFLSLKGISWTMPRRVTEALYSWEEAGALAKDRTR--WRIIPASIWW 399 Query: 198 GLWR 209 +W+ Sbjct: 400 AIWK 403 Score = 27.3 bits (59), Expect(2) = 8e-06 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +2 Query: 206 EERNSRVFGGTSETGDNNILTISGLLSFWCKVL 304 +ERNSR F G + + L LL FWC L Sbjct: 403 KERNSRCFEGIENSVQDVKLNCILLLCFWCNQL 435