BLASTX nr result

ID: Akebia25_contig00061337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00061337
         (334 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulga...    57   2e-06
ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597...    57   3e-06
ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A...    48   8e-06
ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A...    48   8e-06

>emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 24/62 (38%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
 Frame = +3

Query: 30   VLLHCPFASRVWSHFLGLFGVEGCLPWSVKEVFEAWALFRSST--RLLWSVIPFAICWGL 203
            +LLHCP AS++WS ++GL+ ++   P S++E F  W   ++S   + +WS + F I W L
Sbjct: 1103 LLLHCPVASQIWSWWIGLWRIKWAFPLSLREAFTQWFWPKNSPFFKKVWSAVFFIIVWTL 1162

Query: 204  WR 209
            W+
Sbjct: 1163 WK 1164


>ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597191 [Solanum tuberosum]
          Length = 305

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
 Frame = +3

Query: 30  VLLHCPFASRVWSHFLGLFGVEGCLPWSVKEVFEAWALFR--SSTRLLWSVIPFAICWGL 203
           +LLHC  AS +WS F  L G+    P +VK+ +E+W+L++   + + +W +IP  I W +
Sbjct: 194 LLLHCEVASELWSMFFCLSGINWTTPLTVKDAYESWSLWKVDKAIKKIWIMIPACIFWSI 253

Query: 204 W 206
           W
Sbjct: 254 W 254


>ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 556

 Score = 47.8 bits (112), Expect(2) = 8e-06
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
 Frame = +3

Query: 30  VLLHCPFASRVWSHFLGLFGVEGCLPWSVKEVFEAW----ALFRSSTRLLWSVIPFAICW 197
           + LHC +  ++W  FL L G+   +P  V E   +W    AL +  TR  W +IP +I W
Sbjct: 448 LFLHCKYTRQLWRIFLSLKGISWTMPRRVTEALYSWEEAGALAKDRTR--WRIIPASIWW 505

Query: 198 GLWR 209
            +W+
Sbjct: 506 AIWK 509



 Score = 27.3 bits (59), Expect(2) = 8e-06
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +2

Query: 206 EERNSRVFGGTSETGDNNILTISGLLSFWCKVL 304
           +ERNSR F G   +  +  L    LL FWC  L
Sbjct: 509 KERNSRCFEGIENSVQDVKLNCILLLCFWCNQL 541


>ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 450

 Score = 47.8 bits (112), Expect(2) = 8e-06
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
 Frame = +3

Query: 30  VLLHCPFASRVWSHFLGLFGVEGCLPWSVKEVFEAW----ALFRSSTRLLWSVIPFAICW 197
           + LHC +  ++W  FL L G+   +P  V E   +W    AL +  TR  W +IP +I W
Sbjct: 342 LFLHCKYTRQLWRIFLSLKGISWTMPRRVTEALYSWEEAGALAKDRTR--WRIIPASIWW 399

Query: 198 GLWR 209
            +W+
Sbjct: 400 AIWK 403



 Score = 27.3 bits (59), Expect(2) = 8e-06
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +2

Query: 206 EERNSRVFGGTSETGDNNILTISGLLSFWCKVL 304
           +ERNSR F G   +  +  L    LL FWC  L
Sbjct: 403 KERNSRCFEGIENSVQDVKLNCILLLCFWCNQL 435


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