BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00061122
         (455 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   118   1e-28
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           118   1e-28
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   117   3e-28
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       110   2e-27
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...   113   2e-26
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   115   3e-26
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             117   4e-26
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               114   1e-25
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   114   2e-25
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                116   2e-25
emb|CAD22562.1| reverse transcriptase [Brassica rapa subsp. olei...   120   3e-25
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   106   3e-25
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   114   5e-25
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   106   6e-25
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   106   6e-25
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               114   6e-25
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00...   108   8e-25
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694...   104   1e-24
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   112   2e-24
emb|CAA73803.1| reverse transcriptase [Allium cepa]                   116   4e-24

>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score =  118 bits (296), Expect(2) = 1e-28
 Identities = 53/124 (42%), Positives = 90/124 (72%)
 Frame = +1

Query: 1   NVIYKIISKVLTNKIR*VTHKLVGLNQSAFIKSRSIADNILLTHELVRNYHRKNSSPKEA 180
           N +YK+ISK+LT++++ +   ++G +QSAF+  RS+A+N+LL  E+V  Y+R N SP+  
Sbjct: 390 NTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGM 449

Query: 181 VKVDLRKANDTVDWEAIVESLNAFKFPQRFIDWIFKYISSLNYTISLNGSFVGWFEGKRG 360
           +KVDL+KA D+V WE +  +L A   P+R+I+WI + I++ ++TIS+NG+  G+F   +G
Sbjct: 450 LKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKG 509

Query: 361 ITKG 372
           + +G
Sbjct: 510 LRQG 513



 Score = 33.5 bits (75), Expect(2) = 1e-28
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = +3

Query: 366 QGDPLSPYLFVLIMGALNPLFQEKVKEG 449
           QGDPLSPYLFVL M   + L   +   G
Sbjct: 512 QGDPLSPYLFVLAMEVFSKLLYSRYDSG 539


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  118 bits (296), Expect(2) = 1e-28
 Identities = 53/124 (42%), Positives = 90/124 (72%)
 Frame = +1

Query: 1   NVIYKIISKVLTNKIR*VTHKLVGLNQSAFIKSRSIADNILLTHELVRNYHRKNSSPKEA 180
           N +YK+ISK+LT++++ +   ++G +QSAF+  RS+A+N+LL  E+V  Y+R N SP+  
Sbjct: 390 NTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGM 449

Query: 181 VKVDLRKANDTVDWEAIVESLNAFKFPQRFIDWIFKYISSLNYTISLNGSFVGWFEGKRG 360
           +KVDL+KA D+V WE +  +L A   P+R+I+WI + I++ ++TIS+NG+  G+F   +G
Sbjct: 450 LKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKG 509

Query: 361 ITKG 372
           + +G
Sbjct: 510 LRQG 513



 Score = 33.5 bits (75), Expect(2) = 1e-28
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = +3

Query: 366 QGDPLSPYLFVLIMGALNPLFQEKVKEG 449
           QGDPLSPYLFVL M   + L   +   G
Sbjct: 512 QGDPLSPYLFVLAMEVFSKLLYSRYDSG 539


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
           subsp. vesca]
          Length = 958

 Score =  117 bits (293), Expect(2) = 3e-28
 Identities = 53/124 (42%), Positives = 79/124 (63%)
 Frame = +1

Query: 1   NVIYKIISKVLTNKIR*VTHKLVGLNQSAFIKSRSIADNILLTHELVRNYHRKNSSPKEA 180
           N  YKII+K+L N+++   H +VG +QS FI  R I DNILL  E++ +YH+ +  P+  
Sbjct: 357 NTFYKIIAKLLANRLKGTLHLIVGPSQSTFIPGRRIGDNILLAQEIICDYHKADGQPRCT 416

Query: 181 VKVDLRKANDTVDWEAIVESLNAFKFPQRFIDWIFKYISSLNYTISLNGSFVGWFEGKRG 360
             VD+ KANDTV+W+ I+ +L AF  P   I WI   ISS  +++ +NG   G+F  +RG
Sbjct: 417 FMVDMMKANDTVEWDFIIATLQAFNIPSTLIGWIKSCISSAKFSVCVNGELAGFFARRRG 476

Query: 361 ITKG 372
           + +G
Sbjct: 477 LRQG 480



 Score = 33.5 bits (75), Expect(2) = 3e-28
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +3

Query: 366 QGDPLSPYLFVLIMGALNPLFQEKV 440
           QGDPLSPYLFV+ M  L+   Q ++
Sbjct: 479 QGDPLSPYLFVIAMEVLSLCIQRRI 503


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  110 bits (276), Expect(2) = 2e-27
 Identities = 49/124 (39%), Positives = 87/124 (70%)
 Frame = +1

Query: 1   NVIYKIISKVLTNKIR*VTHKLVGLNQSAFIKSRSIADNILLTHELVRNYHRKNSSPKEA 180
           N +YK+I+++LT++++ +   ++   QSAF+  RS+A+N+LL  +LV  Y+  N SP+  
Sbjct: 530 NTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISPRGM 589

Query: 181 VKVDLRKANDTVDWEAIVESLNAFKFPQRFIDWIFKYISSLNYTISLNGSFVGWFEGKRG 360
           +KVDL+KA D+V WE ++ +L A   P++FI+WI + IS+  +T+S+NG   G+F+  +G
Sbjct: 590 LKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGFFKSTKG 649

Query: 361 ITKG 372
           + +G
Sbjct: 650 LRQG 653



 Score = 37.4 bits (85), Expect(2) = 2e-27
 Identities = 17/29 (58%), Positives = 20/29 (68%)
 Frame = +3

Query: 366 QGDPLSPYLFVLIMGALNPLFQEKVKEGL 452
           QGDPLSPYLFVL M A + L   + + GL
Sbjct: 652 QGDPLSPYLFVLAMEAFSNLLHSRYESGL 680


>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 402

 Score =  113 bits (283), Expect(2) = 2e-26
 Identities = 53/124 (42%), Positives = 86/124 (69%)
 Frame = +1

Query: 1   NVIYKIISKVLTNKIR*VTHKLVGLNQSAFIKSRSIADNILLTHELVRNYHRKNSSPKEA 180
           +VIYKIISK+LT++++ V + +V  NQSAF+K R I DNI+L+HELV++Y RK  SP+  
Sbjct: 204 SVIYKIISKILTSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSRKGISPRCM 263

Query: 181 VKVDLRKANDTVDWEAIVESLNAFKFPQRFIDWIFKYISSLNYTISLNGSFVGWFEGKRG 360
           VK+DL+KA ++V+W  I   +    F  +F++W+   +++ +YT ++NG     F  K+G
Sbjct: 264 VKIDLQKAYNSVEWPFIKHLMLELGFSYKFVNWVMGCLTTASYTFNINGDLTRPFAAKKG 323

Query: 361 ITKG 372
           + +G
Sbjct: 324 LRQG 327



 Score = 31.6 bits (70), Expect(2) = 2e-26
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +3

Query: 366 QGDPLSPYLFVLIMGALN 419
           QGDP+SPYLFV+ M  LN
Sbjct: 326 QGDPISPYLFVICMEYLN 343


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  115 bits (288), Expect(2) = 3e-26
 Identities = 56/123 (45%), Positives = 85/123 (69%)
 Frame = +1

Query: 4   VIYKIISKVLTNKIR*VTHKLVGLNQSAFIKSRSIADNILLTHELVRNYHRKNSSPKEAV 183
           VIYKIISK+LTN+++ +  ++V   QS FI  R IADNILL  EL+R Y RK+ SP+  +
Sbjct: 522 VIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIM 581

Query: 184 KVDLRKANDTVDWEAIVESLNAFKFPQRFIDWIFKYISSLNYTISLNGSFVGWFEGKRGI 363
           KVD+RKA D+V+W  +   L  F FP RF+ WI + +S+++Y++ +NG     F+ ++G+
Sbjct: 582 KVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGL 641

Query: 364 TKG 372
            +G
Sbjct: 642 RQG 644



 Score = 28.9 bits (63), Expect(2) = 3e-26
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 366 QGDPLSPYLFVLIMGALNPLFQE 434
           QGDP+SP+LF L M  L+   +E
Sbjct: 643 QGDPMSPFLFALCMEYLSRCLEE 665


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  117 bits (292), Expect(2) = 4e-26
 Identities = 52/124 (41%), Positives = 86/124 (69%)
 Frame = +1

Query: 1   NVIYKIISKVLTNKIR*VTHKLVGLNQSAFIKSRSIADNILLTHELVRNYHRKNSSPKEA 180
           NVIYKIISK++ N+++ V  K +  NQ+AF+K R + +N+LL  ELV++YH+++ S + A
Sbjct: 63  NVIYKIISKIIANRLKMVLPKFIAGNQTAFVKDRLLIENLLLATELVKDYHKESVSSRCA 122

Query: 181 VKVDLRKANDTVDWEAIVESLNAFKFPQRFIDWIFKYISSLNYTISLNGSFVGWFEGKRG 360
           +K+D+ KA ++V W  I   L +  FP  F+ WI   IS+ ++++ +NG  VG+F+ KRG
Sbjct: 123 IKIDISKAFNSVQWSFIRNILLSMDFPMEFVHWIMLCISTASFSVQVNGELVGFFQSKRG 182

Query: 361 ITKG 372
           + +G
Sbjct: 183 LRQG 186



 Score = 26.6 bits (57), Expect(2) = 4e-26
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 366 QGDPLSPYLFVLIMGALNPLFQE 434
           QG  LSPYLFV+ M  L+ L  +
Sbjct: 185 QGCSLSPYLFVMSMDVLSKLLDQ 207


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  114 bits (286), Expect(2) = 1e-25
 Identities = 47/124 (37%), Positives = 87/124 (70%)
 Frame = +1

Query: 1   NVIYKIISKVLTNKIR*VTHKLVGLNQSAFIKSRSIADNILLTHELVRNYHRKNSSPKEA 180
           NV+YK+ISK+L N+++ +  + +  NQS+F+K R + +N+LL  +LV++YH+ + S + A
Sbjct: 89  NVMYKVISKILANRLKLLLPQFIAGNQSSFVKDRLLIENVLLATDLVKDYHKDSISERCA 148

Query: 181 VKVDLRKANDTVDWEAIVESLNAFKFPQRFIDWIFKYISSLNYTISLNGSFVGWFEGKRG 360
           +K+D+ KA+D+V W  ++ +L A  FP+ FI WI   I++ ++++ +NG   G+F+  RG
Sbjct: 149 IKIDISKASDSVQWSFLINTLTAMHFPEMFIHWIRLCITTPSFSVQVNGELAGFFQSSRG 208

Query: 361 ITKG 372
           + +G
Sbjct: 209 LRQG 212



 Score = 27.7 bits (60), Expect(2) = 1e-25
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 366 QGDPLSPYLFVLIMGALNPLFQEKVKEG 449
           QG  LSPYLFV+ M  L+ L  + V  G
Sbjct: 211 QGCALSPYLFVICMDVLSKLLDKVVGIG 238


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  114 bits (285), Expect(2) = 2e-25
 Identities = 49/124 (39%), Positives = 85/124 (68%)
 Frame = +1

Query: 1    NVIYKIISKVLTNKIR*VTHKLVGLNQSAFIKSRSIADNILLTHELVRNYHRKNSSPKEA 180
            NV+YK+ISK+L N+++ +    +  NQSAF+K R + +N+LL  ELV++YH+++ +P+ A
Sbjct: 833  NVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCA 892

Query: 181  VKVDLRKANDTVDWEAIVESLNAFKFPQRFIDWIFKYISSLNYTISLNGSFVGWFEGKRG 360
            +K+D+ KA D+V W+ ++ +L A  FP+ F  WI   IS+  +++ +NG   G+F   RG
Sbjct: 893  MKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRG 952

Query: 361  ITKG 372
            + +G
Sbjct: 953  LRQG 956



 Score = 27.3 bits (59), Expect(2) = 2e-25
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 366  QGDPLSPYLFVLIMGALNPLFQE 434
            QG  LSPYLFV+ M  L+ +  E
Sbjct: 955  QGCALSPYLFVICMNVLSHMIDE 977


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  116 bits (290), Expect(2) = 2e-25
 Identities = 50/124 (40%), Positives = 85/124 (68%)
 Frame = +1

Query: 1   NVIYKIISKVLTNKIR*VTHKLVGLNQSAFIKSRSIADNILLTHELVRNYHRKNSSPKEA 180
           NVIYK+ISK++ N+++ +    +  NQSAF++ R + +N+LL  ELV++YH+ + SP+ A
Sbjct: 109 NVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCA 168

Query: 181 VKVDLRKANDTVDWEAIVESLNAFKFPQRFIDWIFKYISSLNYTISLNGSFVGWFEGKRG 360
           +K+D+ KA D+V W+ ++ +L A  FP+ F  WI   IS+  +++ +NG   G+F  KRG
Sbjct: 169 MKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRG 228

Query: 361 ITKG 372
           + +G
Sbjct: 229 LRQG 232



 Score = 25.4 bits (54), Expect(2) = 2e-25
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3

Query: 366 QGDPLSPYLFVLIMGALN 419
           QG  LSPYLFV+ M  L+
Sbjct: 231 QGCALSPYLFVICMNVLS 248


>emb|CAD22562.1| reverse transcriptase [Brassica rapa subsp. oleifera]
          Length = 137

 Score =  120 bits (300), Expect = 3e-25
 Identities = 51/124 (41%), Positives = 87/124 (70%)
 Frame = +1

Query: 1   NVIYKIISKVLTNKIR*VTHKLVGLNQSAFIKSRSIADNILLTHELVRNYHRKNSSPKEA 180
           N++YK+ISK++ N+++ +    V  NQ+AF+K RS+ +N+LL  EL+R+Y++ +      
Sbjct: 10  NIVYKVISKIIANRLKPILRDCVSPNQAAFLKGRSLGENVLLASELIRDYNKSSCLRSSM 69

Query: 181 VKVDLRKANDTVDWEAIVESLNAFKFPQRFIDWIFKYISSLNYTISLNGSFVGWFEGKRG 360
           +KVD+RKA DTV W+ +++ L A  FP  F+ WI + I+S  ++++LNG   G+FEGK+G
Sbjct: 70  LKVDIRKAFDTVCWDFVIKILRAQGFPPLFVSWIQECITSPRFSVALNGELAGFFEGKKG 129

Query: 361 ITKG 372
           + +G
Sbjct: 130 LRQG 133


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
           [Arabidopsis thaliana]
          Length = 1164

 Score =  106 bits (264), Expect(2) = 3e-25
 Identities = 49/124 (39%), Positives = 80/124 (64%)
 Frame = +1

Query: 1   NVIYKIISKVLTNKIR*VTHKLVGLNQSAFIKSRSIADNILLTHELVRNYHRKNSSPKEA 180
           N +YK+ISK+LT++++      +  +QSAF+  R   +N+LL  ELV  Y++KN +P   
Sbjct: 427 NTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENVLLATELVHGYNKKNIAPSSM 486

Query: 181 VKVDLRKANDTVDWEAIVESLNAFKFPQRFIDWIFKYISSLNYTISLNGSFVGWFEGKRG 360
           +KVDLRKA D+V W+ IV +L A   P++F  WI + +S+ ++++ LNG   G F   +G
Sbjct: 487 LKVDLRKAFDSVRWDFIVSALRALNVPEKFTCWILECLSTASFSVILNGHSAGHFWSSKG 546

Query: 361 ITKG 372
           + +G
Sbjct: 547 LRQG 550



 Score = 34.7 bits (78), Expect(2) = 3e-25
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = +3

Query: 366 QGDPLSPYLFVLIMGALNPLFQEKVKEG 449
           QGDP+SPYLFVL M   + L Q +   G
Sbjct: 549 QGDPMSPYLFVLAMEVFSGLLQSRYTSG 576


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score =  114 bits (286), Expect(2) = 5e-25
 Identities = 50/124 (40%), Positives = 86/124 (69%)
 Frame = +1

Query: 1    NVIYKIISKVLTNKIR*VTHKLVGLNQSAFIKSRSIADNILLTHELVRNYHRKNSSPKEA 180
            NVIYK+ISK++ N+++ +    +  NQSAF++ R + +N+LL  ELV++YH+ + SP+ A
Sbjct: 678  NVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLMENVLLATELVKDYHKDSISPRCA 737

Query: 181  VKVDLRKANDTVDWEAIVESLNAFKFPQRFIDWIFKYISSLNYTISLNGSFVGWFEGKRG 360
            +K+D+ KA D+V W+ ++ +L A KFP++F  WI   IS+  +++ +N    G+F  KRG
Sbjct: 738  MKIDISKAFDSVQWQFLLNTLEALKFPEKFRHWIKLCISTATFSVQVNSEQAGFFGSKRG 797

Query: 361  ITKG 372
            + +G
Sbjct: 798  LRQG 801



 Score = 25.4 bits (54), Expect(2) = 5e-25
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3

Query: 366 QGDPLSPYLFVLIMGALN 419
           QG  LSPYLFV+ M  L+
Sbjct: 800 QGCALSPYLFVICMNVLS 817


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score =  106 bits (264), Expect(2) = 6e-25
 Identities = 46/124 (37%), Positives = 87/124 (70%)
 Frame = +1

Query: 1   NVIYKIISKVLTNKIR*VTHKLVGLNQSAFIKSRSIADNILLTHELVRNYHRKNSSPKEA 180
           N +YK+I+K+LT++++ + ++++  +QSAF+  R +++N+LL  E+V  Y+ KN S +  
Sbjct: 531 NTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGM 590

Query: 181 VKVDLRKANDTVDWEAIVESLNAFKFPQRFIDWIFKYISSLNYTISLNGSFVGWFEGKRG 360
           +KVDLRKA D+V W+ I+ +  A   P++F+ WI + IS+  +++ +NGS  G+F+  +G
Sbjct: 591 LKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKG 650

Query: 361 ITKG 372
           + +G
Sbjct: 651 LRQG 654



 Score = 33.5 bits (75), Expect(2) = 6e-25
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = +3

Query: 366 QGDPLSPYLFVLIMGALNPLFQEKVKEG 449
           QGDPLSPYLFVL M   + L + +   G
Sbjct: 653 QGDPLSPYLFVLAMEVFSSLLKARFDAG 680


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score =  106 bits (264), Expect(2) = 6e-25
 Identities = 46/124 (37%), Positives = 87/124 (70%)
 Frame = +1

Query: 1   NVIYKIISKVLTNKIR*VTHKLVGLNQSAFIKSRSIADNILLTHELVRNYHRKNSSPKEA 180
           N +YK+I+K+LT++++ + ++++  +QSAF+  R +++N+LL  E+V  Y+ KN S +  
Sbjct: 531 NTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGM 590

Query: 181 VKVDLRKANDTVDWEAIVESLNAFKFPQRFIDWIFKYISSLNYTISLNGSFVGWFEGKRG 360
           +KVDLRKA D+V W+ I+ +  A   P++F+ WI + IS+  +++ +NGS  G+F+  +G
Sbjct: 591 LKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKG 650

Query: 361 ITKG 372
           + +G
Sbjct: 651 LRQG 654



 Score = 33.5 bits (75), Expect(2) = 6e-25
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = +3

Query: 366 QGDPLSPYLFVLIMGALNPLFQEKVKEG 449
           QGDPLSPYLFVL M   + L + +   G
Sbjct: 653 QGDPLSPYLFVLAMEVFSSLLKARFDAG 680


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  114 bits (284), Expect(2) = 6e-25
 Identities = 49/124 (39%), Positives = 85/124 (68%)
 Frame = +1

Query: 1   NVIYKIISKVLTNKIR*VTHKLVGLNQSAFIKSRSIADNILLTHELVRNYHRKNSSPKEA 180
           NV+YK+ISK++ N+++ +  + +  NQSAF+K R + +N+LL  ELV++YH+ + S + A
Sbjct: 183 NVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHKDSISARCA 242

Query: 181 VKVDLRKANDTVDWEAIVESLNAFKFPQRFIDWIFKYISSLNYTISLNGSFVGWFEGKRG 360
           +K+D+ KA D+V W  +  +L A  F   FI WI   I++ ++++ +NG  VG+F+ KRG
Sbjct: 243 IKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRG 302

Query: 361 ITKG 372
           + +G
Sbjct: 303 LRQG 306



 Score = 25.8 bits (55), Expect(2) = 6e-25
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 366 QGDPLSPYLFVLIMGALNPLFQE 434
           QG  LSPYLFV+ M  L+ +  +
Sbjct: 305 QGCSLSPYLFVICMDVLSKMLDK 327


>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
           thaliana]
          Length = 1253

 Score =  108 bits (270), Expect(2) = 8e-25
 Identities = 48/122 (39%), Positives = 86/122 (70%)
 Frame = +1

Query: 7   IYKIISKVLTNKIR*VTHKLVGLNQSAFIKSRSIADNILLTHELVRNYHRKNSSPKEAVK 186
           +YK+I+++LTN+++ +  +++   QSAF+  R +A+N+LL  ELV+ Y+R+N  P+  +K
Sbjct: 485 LYKVIARLLTNRLQCLLSQVISPFQSAFLPGRFLAENVLLATELVQGYNRQNIDPRGMLK 544

Query: 187 VDLRKANDTVDWEAIVESLNAFKFPQRFIDWIFKYISSLNYTISLNGSFVGWFEGKRGIT 366
           VDLRKA D++ W+ I+ +L A   P RF+ WI + IS+  +++ +NG+  G+F+  RG+ 
Sbjct: 545 VDLRKAFDSIRWDFIISALKAIGIPDRFVYWITQCISTPTFSVCVNGNTGGFFKSTRGLR 604

Query: 367 KG 372
           +G
Sbjct: 605 QG 606



 Score = 30.8 bits (68), Expect(2) = 8e-25
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 366 QGDPLSPYLFVLIMGALNPLFQEKVKEG 449
           QG+PLSP+LFVL M   + L   + + G
Sbjct: 605 QGNPLSPFLFVLAMEVFSSLLNSRFQAG 632


>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
           putative protein [Arabidopsis thaliana]
          Length = 1141

 Score =  104 bits (260), Expect(2) = 1e-24
 Identities = 49/124 (39%), Positives = 86/124 (69%)
 Frame = +1

Query: 1   NVIYKIISKVLTNKIR*VTHKLVGLNQSAFIKSRSIADNILLTHELVRNYHRKNSSPKEA 180
           N +YK+I+++LT++++ +   ++  +QSAF+  R +A+N+LL  E+V  Y+ +N S +  
Sbjct: 508 NTLYKVIARLLTDRLQKLLSCVISPSQSAFLPGRLLAENVLLATEMVHGYNWRNISLRGM 567

Query: 181 VKVDLRKANDTVDWEAIVESLNAFKFPQRFIDWIFKYISSLNYTISLNGSFVGWFEGKRG 360
           +KVDLRKA D+V WE I+ +L A   P +FI+WI + IS+  +T+S+NG   G+F+  +G
Sbjct: 568 LKVDLRKAFDSVRWEFIIAALLALGVPTKFINWIHQCISTPTFTVSVNGCCGGFFKSAKG 627

Query: 361 ITKG 372
           + +G
Sbjct: 628 LRQG 631



 Score = 33.9 bits (76), Expect(2) = 1e-24
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = +3

Query: 366 QGDPLSPYLFVLIMGALNPLFQEKVKEG 449
           QGDPLSPYLFVL M   + L   +   G
Sbjct: 630 QGDPLSPYLFVLAMEVFSKLLNSRFDSG 657


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score =  112 bits (280), Expect(2) = 2e-24
 Identities = 48/124 (38%), Positives = 82/124 (66%)
 Frame = +1

Query: 1   NVIYKIISKVLTNKIR*VTHKLVGLNQSAFIKSRSIADNILLTHELVRNYHRKNSSPKEA 180
           NV+YK+ISK++ N+++ V  K +  NQSAF+K R + +N+LL  ELV++YH+   S + A
Sbjct: 536 NVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCA 595

Query: 181 VKVDLRKANDTVDWEAIVESLNAFKFPQRFIDWIFKYISSLNYTISLNGSFVGWFEGKRG 360
           +K+D+ KA D+V W  ++       FP+ FI WI   I++ ++++ +NG   G+F+  RG
Sbjct: 596 IKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAGYFQSSRG 655

Query: 361 ITKG 372
           + +G
Sbjct: 656 LRQG 659



 Score = 25.8 bits (55), Expect(2) = 2e-24
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 366 QGDPLSPYLFVLIMGALNPLFQE 434
           QG  LSPYLFV+ M  L+ +  +
Sbjct: 658 QGCALSPYLFVICMDVLSKMLDK 680


>emb|CAA73803.1| reverse transcriptase [Allium cepa]
          Length = 137

 Score =  116 bits (290), Expect = 4e-24
 Identities = 54/124 (43%), Positives = 85/124 (68%)
 Frame = +1

Query: 1   NVIYKIISKVLTNKIR*VTHKLVGLNQSAFIKSRSIADNILLTHELVRNYHRKNSSPKEA 180
           N IYK ISKVL ++++ V   LV  NQ+A++  R+I D++LL+HEL++ Y RK+++P+  
Sbjct: 10  NTIYKCISKVLASRLKHVLPTLVSPNQAAYLSGRNILDHVLLSHELIKGYKRKSATPRAM 69

Query: 181 VKVDLRKANDTVDWEAIVESLNAFKFPQRFIDWIFKYISSLNYTISLNGSFVGWFEGKRG 360
           +K+D+ KA DT+ W +IV  L    FP   I WI++ ISS  ++I++NG   G+F  K+G
Sbjct: 70  LKLDIMKAFDTLQWNSIVRILGYMNFPPHIIAWIYECISSPTFSININGKNEGFFVSKQG 129

Query: 361 ITKG 372
           I +G
Sbjct: 130 IRQG 133