BLASTX nr result
ID: Akebia25_contig00060749
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00060749
(366 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007038597.1| Retrotransposon, unclassified-like protein [... 68 2e-09
ref|XP_007032383.1| H0502G05.11 protein [Theobroma cacao] gi|508... 67 2e-09
dbj|BAB08213.2| unnamed protein product [Oryza sativa Japonica G... 62 6e-08
emb|CAH67120.1| H0502G05.11 [Oryza sativa Indica Group] 60 3e-07
emb|CAD41628.3| OSJNBa0091D06.8 [Oryza sativa Japonica Group] 60 3e-07
gb|ABF97101.1| retrotransposon protein, putative, unclassified [... 59 5e-07
ref|XP_004301673.1| PREDICTED: uncharacterized protein LOC101299... 59 9e-07
gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o... 57 2e-06
gb|ABD63192.1| Reverse transcriptase family protein [Asparagus o... 55 8e-06
gb|AAK92670.1|AC090714_3 putative gag-pol precursor [Oryza sativ... 55 8e-06
>ref|XP_007038597.1| Retrotransposon, unclassified-like protein [Theobroma cacao]
gi|508775842|gb|EOY23098.1| Retrotransposon,
unclassified-like protein [Theobroma cacao]
Length = 1609
Score = 67.8 bits (164), Expect = 2e-09
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 16/116 (13%)
Frame = -3
Query: 340 DNLKDVNLWTKANPWL-MSIT*DLSVEERVGMLALLTEFSYIFAWTYEEISGLCH----- 179
D L+++N+ + + I+ LS E++V ++ LL +F +FAWTYE++ GL
Sbjct: 814 DELEEINMAEEGETSKPLFISKSLSGEQKVVLIELLRKFQDVFAWTYEQMPGLDENLIIH 873
Query: 178 ----------VKQPMRHF*HEVEQQIKGDTLKLLNARFLKPIQQLT*LAKVIPIQK 41
VKQ R F HE+E QIK + KLL F+KPI T LA V+P++K
Sbjct: 874 ELHISPQSKPVKQHARVFHHEIEGQIKEEINKLLKVGFIKPIHYPTWLANVVPVKK 929
>ref|XP_007032383.1| H0502G05.11 protein [Theobroma cacao] gi|508711412|gb|EOY03309.1|
H0502G05.11 protein [Theobroma cacao]
Length = 1352
Score = 67.4 bits (163), Expect = 2e-09
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 16/116 (13%)
Frame = -3
Query: 340 DNLKDVNLWTKANPWL-MSIT*DLSVEERVGMLALLTEFSYIFAWTYEEISGLCH----- 179
D L+++N+ + + I+ LS E++V ++ LL +F +FAWTYE++ GL
Sbjct: 709 DELEEINMAEEGETSKPLFISKSLSGEQKVVLIELLRKFQDVFAWTYEQMLGLDENLITH 768
Query: 178 ----------VKQPMRHF*HEVEQQIKGDTLKLLNARFLKPIQQLT*LAKVIPIQK 41
VKQ R F HE+E QIK + KLL F+KPI T LA V+P++K
Sbjct: 769 ELHISPQSKPVKQHARVFHHEIEGQIKEEINKLLKVGFIKPIHYPTWLANVVPVKK 824
>dbj|BAB08213.2| unnamed protein product [Oryza sativa Japonica Group]
Length = 2876
Score = 62.4 bits (150), Expect = 6e-08
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 15/124 (12%)
Frame = -3
Query: 343 LDNLKDVNLWTKANPWLMSIT*DLSVEERVGMLALLTEFSYIFAWTYEEISGLCH----- 179
+D L ++NL T+ +P + ++ L+ EER + L EF FAWTY+E+ GL
Sbjct: 1775 IDELVEMNLGTEDDPRPIFVSGMLTEEEREDYRSFLMEFRDCFAWTYKEMPGLDSRVATH 1834
Query: 178 ----------VKQPMRHF*HEVEQQIKGDTLKLLNARFLKPIQQLT*LAKVIPIQKYIYQ 29
VKQP R E + Q+ + +L+N F+K IQ LA ++P++K Q
Sbjct: 1835 KLAIDPQFRPVKQPPRRLRPEFQDQVIAEVDRLINVGFIKEIQYPRWLANIVPVEKKNGQ 1894
Query: 28 IWPC 17
+ C
Sbjct: 1895 VRVC 1898
>emb|CAH67120.1| H0502G05.11 [Oryza sativa Indica Group]
Length = 2933
Score = 60.1 bits (144), Expect = 3e-07
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 15/124 (12%)
Frame = -3
Query: 343 LDNLKDVNLWTKANPWLMSIT*DLSVEERVGMLALLTEFSYIFAWTYEEISGL-----CH 179
+D L ++NL T+ +P + ++ L+ EER + L E+ F WTY+E+ GL H
Sbjct: 1840 IDELVEMNLGTEDDPRPIFVSAMLTEEEREDYRSFLMEYRDCFTWTYKEMPGLDPRVATH 1899
Query: 178 ----------VKQPMRHF*HEVEQQIKGDTLKLLNARFLKPIQQLT*LAKVIPIQKYIYQ 29
VKQP R E + Q+ + +L+N F+K IQ LA +IP++K Q
Sbjct: 1900 KLAIDPQFRPVKQPPRRLRPEFQDQVIAEVDRLINVGFIKEIQYPRWLANIIPVEKKNGQ 1959
Query: 28 IWPC 17
+ C
Sbjct: 1960 VRVC 1963
>emb|CAD41628.3| OSJNBa0091D06.8 [Oryza sativa Japonica Group]
Length = 2657
Score = 60.1 bits (144), Expect = 3e-07
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 15/124 (12%)
Frame = -3
Query: 343 LDNLKDVNLWTKANPWLMSIT*DLSVEERVGMLALLTEFSYIFAWTYEEISGL-----CH 179
+D L ++NL T+ +P + ++ L+ EER + L E+ F WTY+E+ GL H
Sbjct: 1760 IDELVEMNLGTEDDPRPIFVSAMLTEEEREDYRSFLMEYRDCFTWTYKEMPGLDPRVATH 1819
Query: 178 ----------VKQPMRHF*HEVEQQIKGDTLKLLNARFLKPIQQLT*LAKVIPIQKYIYQ 29
VKQP R E + Q+ + +L+N F+K IQ LA +IP++K Q
Sbjct: 1820 KLAIDPQFRPVKQPPRRLRPEFQDQVIAEVDRLINVGFIKEIQYPRWLANIIPVEKKNGQ 1879
Query: 28 IWPC 17
+ C
Sbjct: 1880 VRVC 1883
>gb|ABF97101.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1269
Score = 59.3 bits (142), Expect = 5e-07
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 15/116 (12%)
Frame = -3
Query: 343 LDNLKDVNLWTKANPWLMSIT*DLSVEERVGMLALLTEFSYIFAWTYEEISGL-----CH 179
+D+L ++NL T +P ++ LS EE+ + L E+ FAWTY+E+ GL H
Sbjct: 285 IDDLVEINLGTMDDPRPTFVSAALSAEEQESYRSFLMEYRDCFAWTYKEMPGLDPRVATH 344
Query: 178 ----------VKQPMRHF*HEVEQQIKGDTLKLLNARFLKPIQQLT*LAKVIPIQK 41
VKQP R E + Q+ + +L+ A F+K +Q LA ++P++K
Sbjct: 345 KLAIDPQFRPVKQPPRRLRPEFQDQVIAEVDRLITAGFIKEVQYPRWLANIVPVEK 400
>ref|XP_004301673.1| PREDICTED: uncharacterized protein LOC101299390 [Fragaria vesca
subsp. vesca]
Length = 2533
Score = 58.5 bits (140), Expect = 9e-07
Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 15/127 (11%)
Frame = -3
Query: 352 EVALDNLKDVNLWTKANPWLMSIT*DLSVEERVGMLALLTEFSYIFAWTYEEISGL---- 185
+ +D L+++NL T P + ++ L+ +E +LL E+ +FAW Y+++ GL
Sbjct: 1432 QATIDGLQEINLGTVEEPKPIFVSALLTPDELGDYKSLLQEYIDVFAWGYQDMPGLDPNV 1491
Query: 184 -CH----------VKQPMRHF*HEVEQQIKGDTLKLLNARFLKPIQQLT*LAKVIPIQKY 38
H VKQ R F E+ QI+ + KL++ F++ ++ LT LA ++P++K
Sbjct: 1492 AVHKLAVSEEKRWVKQAPRRFRSELAVQIESEVDKLIDVGFIREVKYLTWLASIVPVKKK 1551
Query: 37 IYQIWPC 17
QI C
Sbjct: 1552 NGQIRIC 1558
>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
Length = 1181
Score = 57.4 bits (137), Expect = 2e-06
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 15/115 (13%)
Frame = -3
Query: 340 DNLKDVNLWTKANPWLMSIT*DLSVEERVGMLALLTEFSYIFAWTYEEISGL-----CH- 179
D + +N+ ++NP + I DLS E+ +++L+ E+ +FAW YE++ GL H
Sbjct: 614 DKVIQINMGDESNPKPIFIAEDLSSSEKENLISLIREYIDVFAWNYEDMPGLDPKVAMHR 673
Query: 178 ---------VKQPMRHF*HEVEQQIKGDTLKLLNARFLKPIQQLT*LAKVIPIQK 41
VKQ R F E+ + I+ + KL+++ F++ Q +A ++P+ K
Sbjct: 674 LNIDPDVKPVKQQQRRFRPEIMESIESEVKKLIDSGFVREEQHPDWVANIVPVPK 728
>gb|ABD63192.1| Reverse transcriptase family protein [Asparagus officinalis]
Length = 1146
Score = 55.5 bits (132), Expect = 8e-06
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 15/115 (13%)
Frame = -3
Query: 340 DNLKDVNLWTKANPWLMSIT*DLSVEERVGMLALLTEFSYIFAWTYEEISGL-----CH- 179
D + +N+ +ANP + I+ L E+ ++AL+ E+ +FAW YE++ GL H
Sbjct: 445 DKIVQINMGDEANPKPIFISDSLLSNEKEELIALVKEYIDVFAWNYEDMPGLDPNVAMHR 504
Query: 178 ---------VKQPMRHF*HEVEQQIKGDTLKLLNARFLKPIQQLT*LAKVIPIQK 41
VKQ R F ++ + I+ + KL+ + F++ Q LA +IP+ K
Sbjct: 505 LDIKSDAKPVKQQQRRFRPQIMEAIEAEVKKLIESGFIREEQHPDWLANIIPVMK 559
>gb|AAK92670.1|AC090714_3 putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 1262
Score = 55.5 bits (132), Expect = 8e-06
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Frame = -3
Query: 343 LDNLKDVNLWTKANPWLMSIT*DLSVEERVGMLALLTEFSYIFAWTYEEISGL-----CH 179
+D+L ++NL T +P ++ LS EE+ + L E+ FAWTY+E+ GL H
Sbjct: 285 IDDLVEINLGTMDDPRPTFVSAALSAEEQESYRSFLMEYRDCFAWTYKEMPGLDPRVATH 344
Query: 178 ----------VKQPMRHF*HEVEQQIKGDTLKLLNARFLKPIQQLT*LAKVIP 50
VKQP R E + Q+ + +L+ A F+K +Q LA ++P
Sbjct: 345 KLAIDPQFRPVKQPPRRLRPEFQDQVIAEVDRLITAGFIKEVQYPRWLANIVP 397