BLASTX nr result

ID: Akebia25_contig00060113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00060113
         (203 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348495.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
ref|XP_004228900.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
ref|XP_004288922.1| PREDICTED: putative pentatricopeptide repeat...    59   5e-07
ref|XP_007203355.1| hypothetical protein PRUPE_ppa020478mg [Prun...    59   9e-07
ref|XP_006843375.1| hypothetical protein AMTR_s00053p00090700 [A...    56   6e-06

>ref|XP_006348495.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like isoform X1 [Solanum tuberosum]
           gi|565363546|ref|XP_006348496.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g13650-like isoform X2 [Solanum tuberosum]
           gi|565363548|ref|XP_006348497.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g13650-like isoform X3 [Solanum tuberosum]
           gi|565363550|ref|XP_006348498.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g13650-like isoform X4 [Solanum tuberosum]
           gi|565363552|ref|XP_006348499.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g13650-like isoform X5 [Solanum tuberosum]
          Length = 990

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 36/64 (56%), Positives = 47/64 (73%)
 Frame = -1

Query: 203 GEEVLKLFNKMTESEMRLSNSTLLSVLNGCSSCSRSMKRESQAIHSLVVKIGSELDGFLI 24
           GEE LKLF KM++SEMR SN TL ++L GC++ S ++K   Q IHS++VKIGSE+D F  
Sbjct: 296 GEEALKLFMKMSDSEMRFSNYTLSTILKGCAN-SVNLK-AGQVIHSMLVKIGSEIDDFTS 353

Query: 23  VVLL 12
             LL
Sbjct: 354 CSLL 357


>ref|XP_004228900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Solanum lycopersicum]
          Length = 828

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 36/64 (56%), Positives = 47/64 (73%)
 Frame = -1

Query: 203 GEEVLKLFNKMTESEMRLSNSTLLSVLNGCSSCSRSMKRESQAIHSLVVKIGSELDGFLI 24
           GEE LKLF KM++SEMR SN TL ++L GC++ S ++K   Q IHS++VKIGSE+D F  
Sbjct: 371 GEEALKLFLKMSDSEMRFSNYTLSTILKGCAN-SVNLK-AGQVIHSMLVKIGSEIDDFTS 428

Query: 23  VVLL 12
             LL
Sbjct: 429 CSLL 432


>ref|XP_004288922.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Fragaria vesca subsp. vesca]
          Length = 984

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/59 (52%), Positives = 41/59 (69%)
 Frame = -1

Query: 203 GEEVLKLFNKMTESEMRLSNSTLLSVLNGCSSCSRSMKRESQAIHSLVVKIGSELDGFL 27
           G +VLKLF KMTE +MRL+  TL +VL GC++      R  + +HSLVVK+G E+D FL
Sbjct: 295 GNQVLKLFCKMTELDMRLNKFTLSTVLKGCANVEN--LRAGRVVHSLVVKVGFEVDEFL 351


>ref|XP_007203355.1| hypothetical protein PRUPE_ppa020478mg [Prunus persica]
           gi|462398886|gb|EMJ04554.1| hypothetical protein
           PRUPE_ppa020478mg [Prunus persica]
          Length = 872

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/59 (52%), Positives = 41/59 (69%)
 Frame = -1

Query: 203 GEEVLKLFNKMTESEMRLSNSTLLSVLNGCSSCSRSMKRESQAIHSLVVKIGSELDGFL 27
           G++VLKLF +MTESEMRLS  TL +VL GC++      R  Q +HSL +K G ++D FL
Sbjct: 178 GKQVLKLFCRMTESEMRLSKFTLSTVLKGCANSEN--LRGGQFLHSLAIKSGCKIDEFL 234


>ref|XP_006843375.1| hypothetical protein AMTR_s00053p00090700 [Amborella trichopoda]
           gi|548845742|gb|ERN05050.1| hypothetical protein
           AMTR_s00053p00090700 [Amborella trichopoda]
          Length = 522

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/57 (50%), Positives = 38/57 (66%)
 Frame = -1

Query: 200 EEVLKLFNKMTESEMRLSNSTLLSVLNGCSSCSRSMKRESQAIHSLVVKIGSELDGF 30
           EE L LFN+M E  MR SN TL ++L GCS       R+ +AIH++++KIG ELD F
Sbjct: 229 EEALSLFNQMIEKGMRFSNFTLANMLKGCSIL--GSLRDGRAIHAVMIKIGCELDRF 283


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