BLASTX nr result
ID: Akebia25_contig00059767
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00059767
(214 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007027347.1| RNA-binding family protein isoform 2 [Theobr... 112 5e-23
ref|XP_007027346.1| RNA-binding family protein isoform 1 [Theobr... 112 5e-23
ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [A... 110 3e-22
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,... 109 4e-22
ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr... 109 4e-22
ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citr... 109 4e-22
ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citr... 109 4e-22
ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citr... 109 4e-22
ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citr... 109 4e-22
ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarp... 109 4e-22
ref|XP_006381446.1| 29 kDa ribonucleoprotein [Populus trichocarp... 108 1e-21
ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 107 2e-21
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c... 107 2e-21
ref|NP_001060364.1| Os07g0631900 [Oryza sativa Japonica Group] g... 106 4e-21
gb|EAZ04802.1| hypothetical protein OsI_26976 [Oryza sativa Indi... 106 4e-21
dbj|BAJ87427.1| predicted protein [Hordeum vulgare subsp. vulgar... 105 5e-21
gb|ABR26075.1| chloroplast 29 kDa ribonucleoprotein [Oryza sativ... 105 5e-21
ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 105 8e-21
gb|EMT07115.1| 29 kDa ribonucleoprotein B, chloroplastic [Aegilo... 103 2e-20
ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis th... 103 2e-20
>ref|XP_007027347.1| RNA-binding family protein isoform 2 [Theobroma cacao]
gi|508715952|gb|EOY07849.1| RNA-binding family protein
isoform 2 [Theobroma cacao]
Length = 157
Score = 112 bits (280), Expect = 5e-23
Identities = 54/71 (76%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
Frame = -3
Query: 212 RGFGFVTMSTVKEVEAAVQQFNGYELDGRPLRVSSGPPPP-KEDFSSRGSQGGASFDAPN 36
RGFGFVTMST +EVEAA QQFNGYEL+GR LRV+SGPPPP +E+FS RGS+G + A N
Sbjct: 14 RGFGFVTMSTAEEVEAAAQQFNGYELEGRALRVNSGPPPPRREEFSPRGSRGAPALGASN 73
Query: 35 RVYVGNLSWGV 3
RVYVGNLSWGV
Sbjct: 74 RVYVGNLSWGV 84
>ref|XP_007027346.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508715951|gb|EOY07848.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 254
Score = 112 bits (280), Expect = 5e-23
Identities = 54/71 (76%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
Frame = -3
Query: 212 RGFGFVTMSTVKEVEAAVQQFNGYELDGRPLRVSSGPPPP-KEDFSSRGSQGGASFDAPN 36
RGFGFVTMST +EVEAA QQFNGYEL+GR LRV+SGPPPP +E+FS RGS+G + A N
Sbjct: 111 RGFGFVTMSTAEEVEAAAQQFNGYELEGRALRVNSGPPPPRREEFSPRGSRGAPALGASN 170
Query: 35 RVYVGNLSWGV 3
RVYVGNLSWGV
Sbjct: 171 RVYVGNLSWGV 181
>ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [Amborella trichopoda]
gi|548849631|gb|ERN08390.1| hypothetical protein
AMTR_s00148p00072380 [Amborella trichopoda]
Length = 272
Score = 110 bits (274), Expect = 3e-22
Identities = 53/75 (70%), Positives = 63/75 (84%), Gaps = 5/75 (6%)
Frame = -3
Query: 212 RGFGFVTMSTVKEVEAAVQQFNGYELDGRPLRVSSGPPPPKEDFSSRGSQG-----GASF 48
RGFGFVTMSTV+EVEAAVQQFNG++ +GR LRV+SGPPP +++ S RGS+G SF
Sbjct: 125 RGFGFVTMSTVEEVEAAVQQFNGHDFEGRQLRVNSGPPPARDEMSPRGSRGFDSPRPRSF 184
Query: 47 DAPNRVYVGNLSWGV 3
D+PNRVYVGNLSWGV
Sbjct: 185 DSPNRVYVGNLSWGV 199
>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
29kD A ribonucleoprotein [Nicotiana sylvestris]
Length = 273
Score = 109 bits (272), Expect = 4e-22
Identities = 54/72 (75%), Positives = 61/72 (84%), Gaps = 2/72 (2%)
Frame = -3
Query: 212 RGFGFVTMSTVKEVEAAVQQFNGYELDGRPLRVSSGPPPPKEDFSS--RGSQGGASFDAP 39
RGFGFVTMS+ +EVEAA QQFNGYELDGR LRV+SGPPP K + SS GS+GG SFD+
Sbjct: 128 RGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSS 187
Query: 38 NRVYVGNLSWGV 3
NRVYVGNL+WGV
Sbjct: 188 NRVYVGNLAWGV 199
>ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|568855826|ref|XP_006481497.1| PREDICTED:
ribonucleoprotein At2g37220, chloroplastic-like [Citrus
sinensis] gi|557530828|gb|ESR42011.1| hypothetical
protein CICLE_v10012331mg [Citrus clementina]
Length = 282
Score = 109 bits (272), Expect = 4e-22
Identities = 55/74 (74%), Positives = 62/74 (83%), Gaps = 4/74 (5%)
Frame = -3
Query: 212 RGFGFVTMSTVKEVEAAVQQFNGYELDGRPLRVSSGPPPP-KEDFSSRGSQG---GASFD 45
RGFGFVTMS+V+EVEAA QQFNGYEL+GRPLRV+SGPPPP +E+FS RG +G GA
Sbjct: 135 RGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSS 194
Query: 44 APNRVYVGNLSWGV 3
NRVYVGNLSWGV
Sbjct: 195 GGNRVYVGNLSWGV 208
>ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530827|gb|ESR42010.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 266
Score = 109 bits (272), Expect = 4e-22
Identities = 55/74 (74%), Positives = 62/74 (83%), Gaps = 4/74 (5%)
Frame = -3
Query: 212 RGFGFVTMSTVKEVEAAVQQFNGYELDGRPLRVSSGPPPP-KEDFSSRGSQG---GASFD 45
RGFGFVTMS+V+EVEAA QQFNGYEL+GRPLRV+SGPPPP +E+FS RG +G GA
Sbjct: 135 RGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSS 194
Query: 44 APNRVYVGNLSWGV 3
NRVYVGNLSWGV
Sbjct: 195 GGNRVYVGNLSWGV 208
>ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530826|gb|ESR42009.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 263
Score = 109 bits (272), Expect = 4e-22
Identities = 55/74 (74%), Positives = 62/74 (83%), Gaps = 4/74 (5%)
Frame = -3
Query: 212 RGFGFVTMSTVKEVEAAVQQFNGYELDGRPLRVSSGPPPP-KEDFSSRGSQG---GASFD 45
RGFGFVTMS+V+EVEAA QQFNGYEL+GRPLRV+SGPPPP +E+FS RG +G GA
Sbjct: 135 RGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSS 194
Query: 44 APNRVYVGNLSWGV 3
NRVYVGNLSWGV
Sbjct: 195 GGNRVYVGNLSWGV 208
>ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530825|gb|ESR42008.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 271
Score = 109 bits (272), Expect = 4e-22
Identities = 55/74 (74%), Positives = 62/74 (83%), Gaps = 4/74 (5%)
Frame = -3
Query: 212 RGFGFVTMSTVKEVEAAVQQFNGYELDGRPLRVSSGPPPP-KEDFSSRGSQG---GASFD 45
RGFGFVTMS+V+EVEAA QQFNGYEL+GRPLRV+SGPPPP +E+FS RG +G GA
Sbjct: 135 RGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSS 194
Query: 44 APNRVYVGNLSWGV 3
NRVYVGNLSWGV
Sbjct: 195 GGNRVYVGNLSWGV 208
>ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530824|gb|ESR42007.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 297
Score = 109 bits (272), Expect = 4e-22
Identities = 55/74 (74%), Positives = 62/74 (83%), Gaps = 4/74 (5%)
Frame = -3
Query: 212 RGFGFVTMSTVKEVEAAVQQFNGYELDGRPLRVSSGPPPP-KEDFSSRGSQG---GASFD 45
RGFGFVTMS+V+EVEAA QQFNGYEL+GRPLRV+SGPPPP +E+FS RG +G GA
Sbjct: 135 RGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFSPRGPRGGGAGAPSS 194
Query: 44 APNRVYVGNLSWGV 3
NRVYVGNLSWGV
Sbjct: 195 GGNRVYVGNLSWGV 208
>ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarpa]
gi|222868100|gb|EEF05231.1| 29 kDa ribonucleoprotein
[Populus trichocarpa]
Length = 273
Score = 109 bits (272), Expect = 4e-22
Identities = 51/70 (72%), Positives = 59/70 (84%)
Frame = -3
Query: 212 RGFGFVTMSTVKEVEAAVQQFNGYELDGRPLRVSSGPPPPKEDFSSRGSQGGASFDAPNR 33
RGFGFVTM+T++EVEAA +QFNGYELDGR LRV+ GPPP KE SRG +GG +FD+ NR
Sbjct: 131 RGFGFVTMTTIEEVEAASKQFNGYELDGRTLRVNFGPPPQKESSFSRGPRGGETFDSGNR 190
Query: 32 VYVGNLSWGV 3
VYVGNLSW V
Sbjct: 191 VYVGNLSWNV 200
>ref|XP_006381446.1| 29 kDa ribonucleoprotein [Populus trichocarpa]
gi|550336149|gb|ERP59243.1| 29 kDa ribonucleoprotein
[Populus trichocarpa]
Length = 286
Score = 108 bits (269), Expect = 1e-21
Identities = 54/82 (65%), Positives = 62/82 (75%), Gaps = 12/82 (14%)
Frame = -3
Query: 212 RGFGFVTMSTVKEVEAAVQQFNGYELDGRPLRVSSGPPPPKEDFSSR------------G 69
RGFGFVTMST++EVEAA QQFNGYELDGRPLRV+SGPPP +E SR G
Sbjct: 132 RGFGFVTMSTIEEVEAASQQFNGYELDGRPLRVNSGPPPQRETSFSRLPQRENSFSRGPG 191
Query: 68 SQGGASFDAPNRVYVGNLSWGV 3
++GG +FD+ NRVYVGNLSW V
Sbjct: 192 ARGGETFDSSNRVYVGNLSWNV 213
>ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 275
Score = 107 bits (267), Expect = 2e-21
Identities = 50/76 (65%), Positives = 60/76 (78%), Gaps = 6/76 (7%)
Frame = -3
Query: 212 RGFGFVTMSTVKEVEAAVQQFNGYELDGRPLRVSSGPPPPKEDFSSR------GSQGGAS 51
RGFGFVTMST +EV AAV+QFNGY GRPLRV+SGPPPP+++F+ R G GG S
Sbjct: 125 RGFGFVTMSTAEEVSAAVEQFNGYTFQGRPLRVNSGPPPPRDEFAPRTPRGMGGGGGGGS 184
Query: 50 FDAPNRVYVGNLSWGV 3
FD+ N++YVGNLSWGV
Sbjct: 185 FDSGNKLYVGNLSWGV 200
>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1|
RNA binding protein 30 [Nicotiana plumbaginifolia]
Length = 279
Score = 107 bits (266), Expect = 2e-21
Identities = 54/78 (69%), Positives = 61/78 (78%), Gaps = 8/78 (10%)
Frame = -3
Query: 212 RGFGFVTMSTVKEVEAAVQQFNGYELDGRPLRVSSGPPPPKEDFSS--------RGSQGG 57
RGFGFVTMS+ +EVEAA QQFNGYELDGR LRV+SGPPP K + SS GS+GG
Sbjct: 128 RGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGG 187
Query: 56 ASFDAPNRVYVGNLSWGV 3
SFD+ NRVYVGNL+WGV
Sbjct: 188 GSFDSSNRVYVGNLAWGV 205
>ref|NP_001060364.1| Os07g0631900 [Oryza sativa Japonica Group]
gi|22296371|dbj|BAC10140.1| putative 29 kDa
ribonucleoprotein A, chloroplast precursor [Oryza sativa
Japonica Group] gi|113611900|dbj|BAF22278.1|
Os07g0631900 [Oryza sativa Japonica Group]
gi|125601192|gb|EAZ40768.1| hypothetical protein
OsJ_25244 [Oryza sativa Japonica Group]
Length = 264
Score = 106 bits (264), Expect = 4e-21
Identities = 48/71 (67%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
Frame = -3
Query: 212 RGFGFVTMSTVKEVEAAVQQFNGYELDGRPLRVSSGPPPPKEDFSSRGSQGGAS-FDAPN 36
RGFGFVTMST +E AAV+QFNGY GRPLRV+SGPPPP++DF+ R +GG S FD+ N
Sbjct: 121 RGFGFVTMSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSN 180
Query: 35 RVYVGNLSWGV 3
++YVGNL+WGV
Sbjct: 181 KLYVGNLAWGV 191
>gb|EAZ04802.1| hypothetical protein OsI_26976 [Oryza sativa Indica Group]
Length = 259
Score = 106 bits (264), Expect = 4e-21
Identities = 48/71 (67%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
Frame = -3
Query: 212 RGFGFVTMSTVKEVEAAVQQFNGYELDGRPLRVSSGPPPPKEDFSSRGSQGGAS-FDAPN 36
RGFGFVTMST +E AAV+QFNGY GRPLRV+SGPPPP++DF+ R +GG S FD+ N
Sbjct: 116 RGFGFVTMSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSN 175
Query: 35 RVYVGNLSWGV 3
++YVGNL+WGV
Sbjct: 176 KLYVGNLAWGV 186
>dbj|BAJ87427.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510771|dbj|BAJ91733.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 278
Score = 105 bits (263), Expect = 5e-21
Identities = 49/76 (64%), Positives = 60/76 (78%), Gaps = 6/76 (7%)
Frame = -3
Query: 212 RGFGFVTMSTVKEVEAAVQQFNGYELDGRPLRVSSGPPPPKEDFSSR------GSQGGAS 51
RGFGFVTM +V+EV AAV+QFNGY GRPLRV+SGPPPP+++F+ R G GG S
Sbjct: 128 RGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRVNSGPPPPRDEFAPRTPRAMGGGGGGGS 187
Query: 50 FDAPNRVYVGNLSWGV 3
FD+ N++YVGNLSWGV
Sbjct: 188 FDSANKLYVGNLSWGV 203
>gb|ABR26075.1| chloroplast 29 kDa ribonucleoprotein [Oryza sativa Indica Group]
Length = 205
Score = 105 bits (263), Expect = 5e-21
Identities = 47/71 (66%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
Frame = -3
Query: 212 RGFGFVTMSTVKEVEAAVQQFNGYELDGRPLRVSSGPPPPKEDFSSRGSQGGAS-FDAPN 36
RGFGFVTMST +E AA++QFNGY GRPLRV+SGPPPP++DF+ R +GG S FD+ N
Sbjct: 62 RGFGFVTMSTAEEAGAAIEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSN 121
Query: 35 RVYVGNLSWGV 3
++YVGNL+WGV
Sbjct: 122 KLYVGNLAWGV 132
>ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus] gi|449483348|ref|XP_004156563.1| PREDICTED: 29
kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 278
Score = 105 bits (261), Expect = 8e-21
Identities = 53/71 (74%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
Frame = -3
Query: 212 RGFGFVTMSTVKEVEAAVQQFNGYELDGRPLRVSSGPPPPKEDFSS-RGSQGGASFDAPN 36
RGFGFVTMSTV EVEAA QQFNGYELDGR LRV+ GPPPPK D SS RGS+ + FD N
Sbjct: 134 RGFGFVTMSTVGEVEAAAQQFNGYELDGRLLRVNYGPPPPKRDDSSFRGSRNASRFDNRN 193
Query: 35 RVYVGNLSWGV 3
RV+V NL+WGV
Sbjct: 194 RVHVSNLAWGV 204
>gb|EMT07115.1| 29 kDa ribonucleoprotein B, chloroplastic [Aegilops tauschii]
Length = 551
Score = 103 bits (258), Expect = 2e-20
Identities = 48/77 (62%), Positives = 59/77 (76%), Gaps = 7/77 (9%)
Frame = -3
Query: 212 RGFGFVTMSTVKEVEAAVQQFNGYELDGRPLRVSSGPPPPKEDFSSR-------GSQGGA 54
RGFGFVTM + +EV AAV+QFNGY GRPLRV+SGPPPP+++F+ R G GG
Sbjct: 400 RGFGFVTMGSAEEVAAAVEQFNGYTFQGRPLRVNSGPPPPRDEFAPRTPRTMGGGGGGGG 459
Query: 53 SFDAPNRVYVGNLSWGV 3
SFD+ N++YVGNLSWGV
Sbjct: 460 SFDSANKLYVGNLSWGV 476
>ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis thaliana]
gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName:
Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative
RNA-binding protein [Arabidopsis thaliana]
gi|4056477|gb|AAC98043.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|15081717|gb|AAK82513.1|
At2g37220/F3G5.1 [Arabidopsis thaliana]
gi|16323482|gb|AAL15235.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|20197716|gb|AAM15222.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|330254275|gb|AEC09369.1| chloroplast RNA binding
protein [Arabidopsis thaliana]
Length = 289
Score = 103 bits (257), Expect = 2e-20
Identities = 55/84 (65%), Positives = 61/84 (72%), Gaps = 14/84 (16%)
Frame = -3
Query: 212 RGFGFVTMSTVKEVEAAVQQFNGYELDGRPLRVSSGPPPPK-EDFSSRGSQ--------- 63
RGFGFVTMS+V EVEAA QQFNGYELDGRPLRV++GPPPPK ED SRG +
Sbjct: 132 RGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSG 191
Query: 62 ----GGASFDAPNRVYVGNLSWGV 3
GG+ + NRVYVGNLSWGV
Sbjct: 192 YGGGGGSGAGSGNRVYVGNLSWGV 215