BLASTX nr result

ID: Akebia25_contig00059572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00059572
         (409 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006453487.1| hypothetical protein CICLE_v10008104mg [Citr...    61   2e-07
ref|XP_007013984.1| RING-H2 finger protein ATL13 [Theobroma caca...    59   9e-07
ref|XP_002533989.1| ring finger protein, putative [Ricinus commu...    57   3e-06

>ref|XP_006453487.1| hypothetical protein CICLE_v10008104mg [Citrus clementina]
           gi|568840287|ref|XP_006474101.1| PREDICTED: RING-H2
           finger protein ATL13-like [Citrus sinensis]
           gi|557556713|gb|ESR66727.1| hypothetical protein
           CICLE_v10008104mg [Citrus clementina]
          Length = 494

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 30/58 (51%), Positives = 35/58 (60%)
 Frame = +3

Query: 234 FYMDNRXXXXXXXXXXXXXXXXXXXGLLHLLIRFLFRPTNTNPEDVDNVTAFQGQLQQ 407
           F +DN+                   GLLHLL+RFL RPTN +PED+DNVTA QGQLQQ
Sbjct: 37  FNLDNKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRPTNRDPEDLDNVTALQGQLQQ 94


>ref|XP_007013984.1| RING-H2 finger protein ATL13 [Theobroma cacao]
           gi|508784347|gb|EOY31603.1| RING-H2 finger protein ATL13
           [Theobroma cacao]
          Length = 497

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = +3

Query: 309 GLLHLLIRFLFRPTNTNPEDVDNVTAFQGQLQQ 407
           GLLHLL+RFL RP N  PED+DNVTA QGQLQQ
Sbjct: 66  GLLHLLVRFLLRPPNREPEDIDNVTALQGQLQQ 98


>ref|XP_002533989.1| ring finger protein, putative [Ricinus communis]
           gi|223526024|gb|EEF28396.1| ring finger protein,
           putative [Ricinus communis]
          Length = 495

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = +3

Query: 309 GLLHLLIRFLFRPTNTNPEDVDNVTAFQGQLQQ 407
           GLLHLL+RFL RP N +P+D+DNVTA QGQLQQ
Sbjct: 68  GLLHLLVRFLLRPPNRDPDDLDNVTALQGQLQQ 100


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