BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00058762
         (482 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...    58   2e-06
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    58   2e-06

>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 40/140 (28%), Positives = 59/140 (42%)
 Frame = -2

Query: 472 YWSSAFYFPRKTTENIEAIL*DFFF*KGPSLAHSMHAVNWNRVCRPKEEGRVNLHRITDR 293
           +W SAF  P    + I+ +   F +  GP L      V+WN VC PKEEG + L  +T+ 
Sbjct: 44  FWMSAFRLPNACIKEIDGLCSAFLW-SGPELNRKKAKVSWNDVCMPKEEGGLGLRSLTEA 102

Query: 292 NNAQLMKMFWYWL*TSTPCGEVV*GTATYLMNALGFGGHPQG*RVCEESFEDY*GDGSTT 113
           N    +K+ W  L +S+     V     Y++    F                   D ST 
Sbjct: 103 NKVCCLKLIWRLLSSSSLW---VQWLRQYVIRKGSFWSL---------------RDTSTL 144

Query: 112 LSWVWRGILRVREYVKNHTR 53
            SW+WR +L+ R      T+
Sbjct: 145 GSWMWRKLLKYRHLASGFTQ 164


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 42/141 (29%), Positives = 64/141 (45%)
 Frame = -2

Query: 472 YWSSAFYFPRKTTENIEAIL*DFFF*KGPSLAHSMHAVNWNRVCRPKEEGRVNLHRITDR 293
           +W +AF  PR+    I  I     +  GP L      V+W+ +C+PK+EG + L  + + 
Sbjct: 545 FWMNAFRLPRECINEINRISSALLW-SGPELNPKKAKVSWDEICKPKKEGGLGLQSLREA 603

Query: 292 NNAQLMKMFWYWL*TSTPCGEVV*GTATYLMNALGFGGHPQG*RVCEESFEDY*GDGSTT 113
           N    +K+ W  L     C + +    T  MN L            +ESF    G  ST 
Sbjct: 604 NKVSSLKLIWRLL----SCQDSLWVKWT-RMNLLK-----------KESFWSI-GTHSTL 646

Query: 112 LSWVWRGILRVREYVKNHTRI 50
            SW+WR +L+ RE  K+  +I
Sbjct: 647 GSWIWRRLLKHREVAKSFCKI 667