BLASTX nr result
ID: Akebia25_contig00058361
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00058361
(632 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE02229.2| OSJNBb0015C06.7 [Oryza sativa Japonica Group] 70 7e-16
gb|ABR16307.1| unknown [Picea sitchensis] 58 1e-15
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 70 2e-15
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 70 4e-15
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 74 5e-15
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 65 7e-15
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 68 9e-15
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 67 1e-14
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 72 2e-14
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 69 3e-14
emb|CAN66588.1| hypothetical protein VITISV_017097 [Vitis vinifera] 79 4e-14
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 70 6e-14
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 67 6e-14
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 65 9e-14
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 69 1e-13
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 64 2e-13
gb|AFB73912.1| polyprotein [Citrus sinensis] 64 6e-13
gb|AFB73911.1| polyprotein [Citrus sinensis] 64 8e-13
gb|ABA93686.1| retrotransposon protein, putative, Ty1-copia subc... 65 8e-13
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 62 1e-12
>emb|CAE02229.2| OSJNBb0015C06.7 [Oryza sativa Japonica Group]
Length = 977
Score = 70.1 bits (170), Expect(2) = 7e-16
Identities = 31/64 (48%), Positives = 43/64 (67%)
Frame = -2
Query: 511 VQHYKNVDTPQQNGIVKSMNSTLMECSRCVLSNAGLEKELWAKAVKMICYLIN*SPLVAL 332
V+H+ TPQQNG+ + MN T++ +RC+LSNA + K WA+A ICYLIN SP + +
Sbjct: 395 VRHHTISCTPQQNGVAERMNRTIISKARCMLSNAHMNKRFWAEAANTICYLINRSPTIPI 454
Query: 331 GNKT 320
KT
Sbjct: 455 SKKT 458
Score = 40.0 bits (92), Expect(2) = 7e-16
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -3
Query: 630 KSKSDVYSAHKHFKVELEKSMRHCIKVFRTNNGREFTLNEFN 505
K K D + A K +KV +E+ + +KV RT+NG EF L+ F+
Sbjct: 345 KHKDDTFVAFKEWKVTIERQTKKEVKVLRTDNGGEFCLDAFH 386
>gb|ABR16307.1| unknown [Picea sitchensis]
Length = 407
Score = 58.2 bits (139), Expect(3) = 1e-15
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = -2
Query: 487 TPQQNGIVKSMNSTLMECSRCVLSNAGLEKELWAKAVKMICYLIN*SPLVALGNKTLNE 311
TPQQNG+ + N TLME +RC+L ++ + WA+A+ Y++N +P +A+ +KT E
Sbjct: 231 TPQQNGVAERKNRTLMEMARCMLHARNMDPKFWAEAINTATYIVNRTPTIAVKHKTPEE 289
Score = 39.7 bits (91), Expect(3) = 1e-15
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = -3
Query: 630 KSKSDVYSAHKHFKVELEKSMRHCIKVFRTNNGREFTLNEFN 505
K+K +V+ K FK +EK IK+ RT+NG+E+ EF+
Sbjct: 173 KNKDEVFEKFKEFKAFVEKQSGKSIKILRTDNGKEYVNKEFD 214
Score = 31.2 bits (69), Expect(3) = 1e-15
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 297 PMIISFEFFGCDVYALIPSCQRNKL 223
P + F+ FGCDVY IP +R KL
Sbjct: 296 PTVSHFKVFGCDVYVHIPDEKRKKL 320
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 69.7 bits (169), Expect(2) = 2e-15
Identities = 33/68 (48%), Positives = 44/68 (64%)
Frame = -2
Query: 511 VQHYKNVDTPQQNGIVKSMNSTLMECSRCVLSNAGLEKELWAKAVKMICYLIN*SPLVAL 332
V+H+ TPQQNG+ + MN T++ +RC+LSNA + K WA+A CYLIN SP + L
Sbjct: 574 VRHHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPSIPL 633
Query: 331 GNKTLNEV 308
KT EV
Sbjct: 634 NKKTPIEV 641
Score = 38.5 bits (88), Expect(2) = 2e-15
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = -3
Query: 630 KSKSDVYSAHKHFKVELEKSMRHCIKVFRTNNGREFTLNEFN 505
K K D ++A K +KV +E+ +KV RT+NG EF + F+
Sbjct: 524 KHKDDTFAAFKEWKVRIERQTEKEVKVLRTDNGGEFCSDAFD 565
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 69.7 bits (169), Expect(2) = 4e-15
Identities = 33/68 (48%), Positives = 43/68 (63%)
Frame = -2
Query: 511 VQHYKNVDTPQQNGIVKSMNSTLMECSRCVLSNAGLEKELWAKAVKMICYLIN*SPLVAL 332
V+HY TPQQNG+ + MN T++ + C+LSNA + K WA+A CYLIN SP + L
Sbjct: 311 VRHYTIPYTPQQNGVAERMNRTIISKAHCMLSNARMNKRFWAEAANTACYLINRSPSIPL 370
Query: 331 GNKTLNEV 308
KT EV
Sbjct: 371 NKKTPIEV 378
Score = 37.7 bits (86), Expect(2) = 4e-15
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = -3
Query: 630 KSKSDVYSAHKHFKVELEKSMRHCIKVFRTNNGREFTLNEFN 505
K K D ++A K +KV +E+ +KV RT+NG EF + F+
Sbjct: 261 KHKDDTFAAFKEWKVMIERQTEKEVKVLRTDNGGEFCSDAFD 302
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 74.3 bits (181), Expect(2) = 5e-15
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = -2
Query: 511 VQHYKNVDTPQQNGIVKSMNSTLMECSRCVLSNAGLEKELWAKAVKMICYLIN*SPLVAL 332
V+HY TPQQNG+V+ MN T++ +RC+LSNAGL + WA+A CYLIN SP A+
Sbjct: 520 VRHYTVSHTPQQNGVVERMNRTIISKARCMLSNAGLPRRFWAEAASTACYLINRSPSYAI 579
Query: 331 GNKT 320
KT
Sbjct: 580 DKKT 583
Score = 32.7 bits (73), Expect(2) = 5e-15
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 630 KSKSDVYSAHKHFKVELEKSMRHCIKVFRTNNGREFTLNEFNT 502
K K + + K +K +E+ +KV RT+NG EF +F +
Sbjct: 470 KHKFEAFLVFKEWKTMVERQTERKVKVLRTDNGMEFCSRQFKS 512
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 65.1 bits (157), Expect(2) = 7e-15
Identities = 31/60 (51%), Positives = 41/60 (68%)
Frame = -2
Query: 487 TPQQNGIVKSMNSTLMECSRCVLSNAGLEKELWAKAVKMICYLIN*SPLVALGNKTLNEV 308
TPQQNG+ + MN TL+E +R +L AGLEK WA+AV CYL+N +P A+ KT E+
Sbjct: 568 TPQQNGVAERMNRTLLERTRAMLRAAGLEKSFWAEAVNTACYLVNRAPSTAIELKTPMEM 627
Score = 41.6 bits (96), Expect(2) = 7e-15
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = -3
Query: 630 KSKSDVYSAHKHFKVELEKSMRHCIKVFRTNNGREFTLNEFN 505
K KSDV++ K FK +E IK FRT+NG E+T EF+
Sbjct: 510 KKKSDVFATFKAFKARVELDSGKKIKCFRTDNGGEYTSEEFD 551
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 67.8 bits (164), Expect(2) = 9e-15
Identities = 32/60 (53%), Positives = 41/60 (68%)
Frame = -2
Query: 487 TPQQNGIVKSMNSTLMECSRCVLSNAGLEKELWAKAVKMICYLIN*SPLVALGNKTLNEV 308
TPQQNG+ + MN TL+E +R +L AGL K WA+A K CY+IN SP A+G KT E+
Sbjct: 578 TPQQNGVAERMNRTLLERTRAMLKTAGLAKSFWAEAAKTACYVINRSPSTAIGLKTPMEM 637
Score = 38.5 bits (88), Expect(2) = 9e-15
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -3
Query: 630 KSKSDVYSAHKHFKVELEKSMRHCIKVFRTNNGREFTLNEF 508
K KS VYS K FK ++E IK RT+NG E+T +F
Sbjct: 520 KKKSGVYSVFKEFKAQVELETGKRIKCLRTDNGGEYTDGDF 560
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 67.0 bits (162), Expect(2) = 1e-14
Identities = 32/68 (47%), Positives = 44/68 (64%)
Frame = -2
Query: 511 VQHYKNVDTPQQNGIVKSMNSTLMECSRCVLSNAGLEKELWAKAVKMICYLIN*SPLVAL 332
V+ + TPQQNG+ + MN TL+E +R +L AG+ K WA+AVK CY+IN SP A+
Sbjct: 570 VRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEAVKTACYVINRSPSTAI 629
Query: 331 GNKTLNEV 308
KT E+
Sbjct: 630 DLKTPMEM 637
Score = 38.9 bits (89), Expect(2) = 1e-14
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -3
Query: 630 KSKSDVYSAHKHFKVELEKSMRHCIKVFRTNNGREFTLNEF 508
K KSDV+ K FK ++E R IK RT+NG E+ EF
Sbjct: 520 KKKSDVFPVFKAFKAQIELETRKKIKCLRTDNGGEYIDGEF 560
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 72.0 bits (175), Expect(2) = 2e-14
Identities = 34/68 (50%), Positives = 45/68 (66%)
Frame = -2
Query: 511 VQHYKNVDTPQQNGIVKSMNSTLMECSRCVLSNAGLEKELWAKAVKMICYLIN*SPLVAL 332
V H+ TPQQNG+ + MN T++ +RC+LSNA + K WA+A K CYLIN SP ++L
Sbjct: 469 VMHHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAAKTACYLINRSPSISL 528
Query: 331 GNKTLNEV 308
KT EV
Sbjct: 529 NKKTPIEV 536
Score = 33.5 bits (75), Expect(2) = 2e-14
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -3
Query: 630 KSKSDVYSAHKHFKVELEKSMRHCIKVFRTNNGREFTLNEFN 505
K K D ++A K +KV +++ +KV RT+NG F + F+
Sbjct: 419 KHKDDTFAAFKEWKVMIKRQTEKEVKVLRTDNGGGFCSDAFD 460
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 69.3 bits (168), Expect(2) = 3e-14
Identities = 32/68 (47%), Positives = 44/68 (64%)
Frame = -2
Query: 511 VQHYKNVDTPQQNGIVKSMNSTLMECSRCVLSNAGLEKELWAKAVKMICYLIN*SPLVAL 332
V+H+ TPQQNG+ + MN T++ +RC+LSNA + K WA+A CYLIN SP + L
Sbjct: 574 VRHHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPSIPL 633
Query: 331 GNKTLNEV 308
KT E+
Sbjct: 634 NKKTPIEI 641
Score = 35.4 bits (80), Expect(2) = 3e-14
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -3
Query: 630 KSKSDVYSAHKHFKVELEKSMRHCIKVFRTNNGREFTLNEFN 505
K K D ++A K +KV +E+ +KV RT+N EF + F+
Sbjct: 524 KHKDDTFAAFKEWKVMIERQTEKEVKVLRTDNAGEFCSDAFD 565
>emb|CAN66588.1| hypothetical protein VITISV_017097 [Vitis vinifera]
Length = 815
Score = 79.3 bits (194), Expect(2) = 4e-14
Identities = 35/67 (52%), Positives = 48/67 (71%)
Frame = -2
Query: 508 QHYKNVDTPQQNGIVKSMNSTLMECSRCVLSNAGLEKELWAKAVKMICYLIN*SPLVALG 329
+H+ TPQQNG+ + MN T++E +RC+ NAGLEK+ WA+ V M+CYLIN SP+ AL
Sbjct: 226 RHFTIRKTPQQNGVAEKMNRTIIERARCLRLNAGLEKKFWAEVVNMVCYLINRSPIAALD 285
Query: 328 NKTLNEV 308
K + EV
Sbjct: 286 GKVVKEV 292
Score = 24.6 bits (52), Expect(2) = 4e-14
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 273 FGCDVYALIPSCQRNKL 223
FGC VY IP+ +R+KL
Sbjct: 306 FGCPVYVHIPNEKRSKL 322
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 70.1 bits (170), Expect(2) = 6e-14
Identities = 32/61 (52%), Positives = 43/61 (70%)
Frame = -2
Query: 490 DTPQQNGIVKSMNSTLMECSRCVLSNAGLEKELWAKAVKMICYLIN*SPLVALGNKTLNE 311
+TPQQNG+ + MN TL+E +RC+LSNAGL++ WA+AV CYLIN P + KT E
Sbjct: 566 NTPQQNGVAERMNQTLLERARCMLSNAGLDRRFWAEAVSTACYLINRGPHTGIQCKTPME 625
Query: 310 V 308
+
Sbjct: 626 M 626
Score = 33.5 bits (75), Expect(2) = 6e-14
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -3
Query: 630 KSKSDVYSAHKHFKVELEKSMRHCIKVFRTNNGREFTLNEFN 505
K KS+ + K +K+ +E IK RT+NG EF +EF+
Sbjct: 509 KHKSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEFCWSEFD 550
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 67.0 bits (162), Expect(2) = 6e-14
Identities = 32/68 (47%), Positives = 44/68 (64%)
Frame = -2
Query: 511 VQHYKNVDTPQQNGIVKSMNSTLMECSRCVLSNAGLEKELWAKAVKMICYLIN*SPLVAL 332
V+ + TPQQNG+ + MN TL+E +R +L AG+ K WA+AVK CY+IN SP A+
Sbjct: 570 VRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEAVKTACYVINRSPSTAI 629
Query: 331 GNKTLNEV 308
KT E+
Sbjct: 630 DLKTPMEM 637
Score = 36.6 bits (83), Expect(2) = 6e-14
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -3
Query: 630 KSKSDVYSAHKHFKVELEKSMRHCIKVFRTNNGREFTLNEF 508
K KSDV+ K FK ++E IK RT+NG E+ EF
Sbjct: 520 KKKSDVFPVFKAFKAQIELETGKKIKCLRTDNGGEYVDGEF 560
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 65.5 bits (158), Expect(2) = 9e-14
Identities = 31/68 (45%), Positives = 43/68 (63%)
Frame = -2
Query: 511 VQHYKNVDTPQQNGIVKSMNSTLMECSRCVLSNAGLEKELWAKAVKMICYLIN*SPLVAL 332
V+ + TPQQNG+ + MN TL+E +R +L AG+ K WA+A K CY+IN SP A+
Sbjct: 570 VRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEAAKTACYVINRSPSTAI 629
Query: 331 GNKTLNEV 308
KT E+
Sbjct: 630 DLKTPMEM 637
Score = 37.4 bits (85), Expect(2) = 9e-14
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -3
Query: 630 KSKSDVYSAHKHFKVELEKSMRHCIKVFRTNNGREFTLNEF 508
K KSDV+ K FK ++E IK RT+NG E+ EF
Sbjct: 520 KKKSDVFPVFKAFKAQIELETEKKIKCLRTDNGGEYVDGEF 560
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 69.3 bits (168), Expect(2) = 1e-13
Identities = 32/68 (47%), Positives = 44/68 (64%)
Frame = -2
Query: 511 VQHYKNVDTPQQNGIVKSMNSTLMECSRCVLSNAGLEKELWAKAVKMICYLIN*SPLVAL 332
V+H+ TPQQNG+ + MN T++ +RC+LSNA + K WA+A CYLIN SP + L
Sbjct: 574 VRHHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPSIPL 633
Query: 331 GNKTLNEV 308
KT E+
Sbjct: 634 NKKTPIEI 641
Score = 33.1 bits (74), Expect(2) = 1e-13
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -3
Query: 630 KSKSDVYSAHKHFKVELEKSMRHCIKVFRTNNGREFTLNEFN 505
K K D ++A K KV +E+ +KV T+NG EF + F+
Sbjct: 524 KHKDDTFAAFKERKVMIERQTEKEVKVLCTDNGGEFCSDAFD 565
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group] gi|22655747|gb|AAN04164.1| Putative
retrotransposon protein [Oryza sativa Japonica Group]
gi|31431214|gb|AAP53029.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1229
Score = 63.9 bits (154), Expect(2) = 2e-13
Identities = 30/67 (44%), Positives = 42/67 (62%)
Frame = -2
Query: 508 QHYKNVDTPQQNGIVKSMNSTLMECSRCVLSNAGLEKELWAKAVKMICYLIN*SPLVALG 329
+H+ TPQQN + + MN T++ +RC+LSNA + K WA+A CYLIN SP + L
Sbjct: 572 RHHTIPYTPQQNSVAERMNRTIISKARCMLSNARMNKHYWAEAANTTCYLINRSPSILLN 631
Query: 328 NKTLNEV 308
+T EV
Sbjct: 632 KETPIEV 638
Score = 37.7 bits (86), Expect(2) = 2e-13
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = -3
Query: 630 KSKSDVYSAHKHFKVELEKSMRHCIKVFRTNNGREFTLNEFN 505
K K D ++A K +KV +E+ +KV RT+NG EF + F+
Sbjct: 521 KHKDDTFAAFKEWKVMIERQAEKEVKVLRTDNGGEFCSDAFD 562
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 63.9 bits (154), Expect(2) = 6e-13
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = -2
Query: 487 TPQQNGIVKSMNSTLMECSRCVLSNAGLEKELWAKAVKMICYLIN*SPLVALGNKTLNEV 308
TPQQNG+ + MN TL E R +L AGL WA+A K CY++N SP A+G KT E+
Sbjct: 578 TPQQNGVAERMNRTLTERIRAMLRTAGLPNSFWAEAAKTACYIVNRSPSTAIGLKTAMEM 637
Score = 36.2 bits (82), Expect(2) = 6e-13
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = -3
Query: 630 KSKSDVYSAHKHFKVELEKSMRHCIKVFRTNNGREFTLNEF 508
K KSDV+ K +K +E IK RT+NG E+T +EF
Sbjct: 520 KKKSDVFPVFKEYKAWVELESGKKIKCLRTDNGGEYTDSEF 560
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 63.9 bits (154), Expect(2) = 8e-13
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = -2
Query: 487 TPQQNGIVKSMNSTLMECSRCVLSNAGLEKELWAKAVKMICYLIN*SPLVALGNKTLNEV 308
TPQQNG+ + MN TL E R +L AGL WA+A K CY++N SP A+G KT E+
Sbjct: 578 TPQQNGVAERMNRTLTERIRAMLRTAGLPNSFWAEAAKTACYIVNRSPSTAIGLKTAMEM 637
Score = 35.8 bits (81), Expect(2) = 8e-13
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -3
Query: 630 KSKSDVYSAHKHFKVELEKSMRHCIKVFRTNNGREFTLNEF 508
K KSDV+ K +K +E IK RT+NG E+T EF
Sbjct: 520 KKKSDVFPVFKEYKAWVELESGKKIKCLRTDNGGEYTDGEF 560
>gb|ABA93686.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 680
Score = 65.5 bits (158), Expect(2) = 8e-13
Identities = 30/64 (46%), Positives = 41/64 (64%)
Frame = -2
Query: 511 VQHYKNVDTPQQNGIVKSMNSTLMECSRCVLSNAGLEKELWAKAVKMICYLIN*SPLVAL 332
V+H+ TPQQNG+ + MN T++ +RC+LSNA + K WA+A CYLIN P + L
Sbjct: 250 VRHHTIPYTPQQNGVAECMNRTIISMARCMLSNAHMNKCFWAEAANTACYLINRLPSIPL 309
Query: 331 GNKT 320
KT
Sbjct: 310 NKKT 313
Score = 34.3 bits (77), Expect(2) = 8e-13
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = -3
Query: 630 KSKSDVYSAHKHFKVELEKSMRHCIKVFRTNNGREFTLNEFN 505
K+K D + A K +KV +++ + +KV R +NG EF + F+
Sbjct: 200 KNKDDTFVAFKEWKVMIKRQIEKEVKVLRIDNGGEFCSDAFD 241
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 62.4 bits (150), Expect(2) = 1e-12
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = -2
Query: 511 VQHYKNVDTPQQNGIVKSMNSTLMECSRCVLSNAGLEKELWAKAVKMICYLIN*SPLVAL 332
V+ + TPQQNG+ + MN TL+E +R +L A + K WA+AVK CY+IN SP +
Sbjct: 570 VRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAEMAKSFWAEAVKTACYVINRSPSTTI 629
Query: 331 GNKTLNEV 308
KT E+
Sbjct: 630 DLKTPMEM 637
Score = 36.6 bits (83), Expect(2) = 1e-12
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -3
Query: 630 KSKSDVYSAHKHFKVELEKSMRHCIKVFRTNNGREFTLNEF 508
K KSDV+ K FK ++E IK RT+NG E+ EF
Sbjct: 520 KKKSDVFPVFKAFKAQIELETGKKIKCLRTDNGGEYVDGEF 560