BLASTX nr result
ID: Akebia25_contig00058159
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00058159
(382 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_740598.1| ribosomal protein S11 [Platanus occidentalis] g... 48 8e-10
gb|ADD30140.1| ribosomal protein S11 [Gunnera manicata] 45 1e-09
gb|ADD30129.1| ribosomal protein S11 [Meliosma aff. cuneifolia M... 45 1e-09
gb|ADD30143.1| ribosomal protein S11 [Oxalis latifolia] 45 2e-09
ref|YP_008081490.1| ribosomal protein S11 (chloroplast) [Trochod... 45 2e-09
ref|YP_001294217.1| ribosomal protein S11 [Buxus microphylla] gi... 45 2e-09
ref|YP_004222679.1| ribosomal protein S11 [Anthriscus cerefolium... 44 4e-09
ref|YP_008963724.1| ribosomal protein S11 (chloroplast) [Liquida... 44 4e-09
ref|YP_004563900.1| ribosomal protein S11 [Nelumbo lutea] gi|334... 44 4e-09
ref|YP_567110.1| ribosomal protein S11 [Vitis vinifera] gi|22436... 44 4e-09
ref|NP_904131.1| ribosomal protein S11 [Amborella trichopoda] gi... 46 5e-09
ref|YP_002720145.1| rps11 [Jatropha curcas] gi|224979597|gb|ACN7... 44 5e-09
gb|ADD30141.1| ribosomal protein S11 [Heuchera sanguinea] 43 6e-09
ref|YP_001294131.1| ribosomal protein S11 [Chloranthus spicatus]... 46 8e-09
ref|NP_054967.1| ribosomal protein S11 [Spinacia oleracea] gi|19... 42 8e-09
ref|YP_005089366.1| rps11 gene product (chloroplast) [Silene vul... 42 8e-09
emb|CAA27213.1| unnamed protein product [Spinacia oleracea] 42 8e-09
ref|XP_004173875.1| PREDICTED: DNA-directed RNA polymerase subun... 44 1e-08
gb|AHM89651.1| ribosomal protein S11 (chloroplast) [Lagenaria si... 44 1e-08
ref|YP_002836123.1| ribosomal protein S11 [Megaleranthis sanicul... 45 1e-08
>ref|YP_740598.1| ribosomal protein S11 [Platanus occidentalis]
gi|122166005|sp|Q09G13.1|RR11_PLAOC RecName: Full=30S
ribosomal protein S11, chloroplastic
gi|114054418|gb|ABI49812.1| ribosomal protein S11
[Platanus occidentalis]
Length = 138
Score = 47.8 bits (112), Expect(3) = 8e-10
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = -1
Query: 352 MAKPI*RIDSCRNGGYCSRKNGQRIPKGVIYEQVS 248
MAKPI RI S RNG SRKNG+RIPKGVI+ Q S
Sbjct: 1 MAKPIQRIGSRRNGPIGSRKNGRRIPKGVIHVQAS 35
Score = 32.7 bits (73), Expect(3) = 8e-10
Identities = 17/26 (65%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = -3
Query: 257 ASFHNIIVMVTEVRG-LVSWISACTC 183
ASF+N IV VT+VRG +VSW SA C
Sbjct: 34 ASFNNTIVTVTDVRGRVVSWSSAGAC 59
Score = 27.7 bits (60), Expect(3) = 8e-10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2
Query: 177 RGTRFAAQTAVGSAIGT 127
RGT FAAQTA G+AI T
Sbjct: 66 RGTPFAAQTAAGNAIRT 82
>gb|ADD30140.1| ribosomal protein S11 [Gunnera manicata]
Length = 138
Score = 45.4 bits (106), Expect(3) = 1e-09
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = -1
Query: 352 MAKPI*RIDSCRNGGYCSRKNGQRIPKGVIYEQVS 248
MAKPI RI S RNG SRKN +RIPKGVI+ Q S
Sbjct: 1 MAKPIPRIGSRRNGRIGSRKNARRIPKGVIHVQAS 35
Score = 34.3 bits (77), Expect(3) = 1e-09
Identities = 17/26 (65%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = -3
Query: 257 ASFHNIIVMVTEVRG-LVSWISACTC 183
ASF+N IV VT++RG +VSW SA TC
Sbjct: 34 ASFNNTIVTVTDIRGRVVSWSSAGTC 59
Score = 27.7 bits (60), Expect(3) = 1e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2
Query: 177 RGTRFAAQTAVGSAIGT 127
RGT FAAQTA G+AI T
Sbjct: 66 RGTPFAAQTAAGNAIRT 82
>gb|ADD30129.1| ribosomal protein S11 [Meliosma aff. cuneifolia Moore 333]
Length = 138
Score = 45.4 bits (106), Expect(3) = 1e-09
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = -1
Query: 352 MAKPI*RIDSCRNGGYCSRKNGQRIPKGVIYEQVS 248
MAKPI RI S R G SRKNG+RIPKGVI+ Q S
Sbjct: 1 MAKPILRIGSRRTGRIGSRKNGRRIPKGVIHVQAS 35
Score = 34.3 bits (77), Expect(3) = 1e-09
Identities = 17/26 (65%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = -3
Query: 257 ASFHNIIVMVTEVRG-LVSWISACTC 183
ASF+N IV VT+VRG ++SW SA TC
Sbjct: 34 ASFNNTIVTVTDVRGRVISWSSAGTC 59
Score = 27.7 bits (60), Expect(3) = 1e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2
Query: 177 RGTRFAAQTAVGSAIGT 127
RGT FAAQTA G+AI T
Sbjct: 66 RGTPFAAQTAAGNAIRT 82
>gb|ADD30143.1| ribosomal protein S11 [Oxalis latifolia]
Length = 138
Score = 45.4 bits (106), Expect(3) = 2e-09
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = -1
Query: 352 MAKPI*RIDSCRNGGYCSRKNGQRIPKGVIYEQVS 248
MAKPI RI S RNG SRKN +RIPKGVI+ Q S
Sbjct: 1 MAKPIARIGSRRNGRIGSRKNARRIPKGVIHVQAS 35
Score = 33.9 bits (76), Expect(3) = 2e-09
Identities = 16/26 (61%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = -3
Query: 257 ASFHNIIVMVTEVRG-LVSWISACTC 183
ASF+N IV +T+VRG ++SW SA TC
Sbjct: 34 ASFNNTIVTITDVRGRVISWSSAGTC 59
Score = 27.7 bits (60), Expect(3) = 2e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2
Query: 177 RGTRFAAQTAVGSAIGT 127
RGT FAAQTA G+AI T
Sbjct: 66 RGTPFAAQTAAGNAIRT 82
>ref|YP_008081490.1| ribosomal protein S11 (chloroplast) [Trochodendron aralioides]
gi|290487526|gb|ADD30147.1| ribosomal protein S11
[Trochodendron aralioides] gi|479279329|gb|AGJ72182.1|
ribosomal protein S11 (chloroplast) [Trochodendron
aralioides]
Length = 138
Score = 45.1 bits (105), Expect(3) = 2e-09
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = -1
Query: 352 MAKPI*RIDSCRNGGYCSRKNGQRIPKGVIYEQVS 248
MAKPI RI S NG SRKNG+RIPKGVI+ Q S
Sbjct: 1 MAKPIPRIGSRGNGRIGSRKNGRRIPKGVIHVQAS 35
Score = 34.3 bits (77), Expect(3) = 2e-09
Identities = 17/26 (65%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = -3
Query: 257 ASFHNIIVMVTEVRG-LVSWISACTC 183
ASF+N IV VT+VRG ++SW SA TC
Sbjct: 34 ASFNNTIVTVTDVRGRVISWSSAGTC 59
Score = 27.7 bits (60), Expect(3) = 2e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2
Query: 177 RGTRFAAQTAVGSAIGT 127
RGT FAAQTA G+AI T
Sbjct: 66 RGTPFAAQTAAGNAIRT 82
>ref|YP_001294217.1| ribosomal protein S11 [Buxus microphylla]
gi|172048682|sp|A6MM69.1|RR11_BUXMI RecName: Full=30S
ribosomal protein S11, chloroplastic
gi|146762317|gb|ABQ45281.1| ribosomal protein S11 [Buxus
microphylla]
Length = 138
Score = 44.7 bits (104), Expect(3) = 2e-09
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -1
Query: 352 MAKPI*RIDSCRNGGYCSRKNGQRIPKGVIYEQVS 248
MAKPI RI S +NG SRK+G+RIPKGVI+ Q S
Sbjct: 1 MAKPIPRIGSRKNGRIGSRKSGRRIPKGVIHVQAS 35
Score = 34.7 bits (78), Expect(3) = 2e-09
Identities = 18/26 (69%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = -3
Query: 257 ASFHNIIVMVTEVRG-LVSWISACTC 183
ASF+N IV VT+VRG +VSW SA TC
Sbjct: 34 ASFNNTIVTVTDVRGRVVSWSSAGTC 59
Score = 27.7 bits (60), Expect(3) = 2e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2
Query: 177 RGTRFAAQTAVGSAIGT 127
RGT FAAQTA G+AI T
Sbjct: 66 RGTPFAAQTAAGNAIRT 82
>ref|YP_004222679.1| ribosomal protein S11 [Anthriscus cerefolium]
gi|289645608|gb|ADD13671.1| ribosomal protein S11
[Anthriscus cerefolium]
Length = 138
Score = 43.5 bits (101), Expect(3) = 4e-09
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = -1
Query: 352 MAKPI*RIDSCRNGGYCSRKNGQRIPKGVIYEQVS 248
MAKPI RI S +NG SRKN +RIPKGVI+ Q S
Sbjct: 1 MAKPIPRIGSRKNGRIGSRKNTRRIPKGVIHVQAS 35
Score = 34.7 bits (78), Expect(3) = 4e-09
Identities = 18/26 (69%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = -3
Query: 257 ASFHNIIVMVTEVRG-LVSWISACTC 183
ASF+N IV VT+VRG +VSW SA TC
Sbjct: 34 ASFNNTIVTVTDVRGRVVSWSSAGTC 59
Score = 27.7 bits (60), Expect(3) = 4e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2
Query: 177 RGTRFAAQTAVGSAIGT 127
RGT FAAQTA G+AI T
Sbjct: 66 RGTPFAAQTAAGNAIRT 82
>ref|YP_008963724.1| ribosomal protein S11 (chloroplast) [Liquidambar formosana]
gi|290487516|gb|ADD30142.1| ribosomal protein S11
[Liquidambar styraciflua] gi|491650403|gb|AGL13463.1|
ribosomal protein S11 (chloroplast) [Liquidambar
formosana]
Length = 138
Score = 43.5 bits (101), Expect(3) = 4e-09
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = -1
Query: 352 MAKPI*RIDSCRNGGYCSRKNGQRIPKGVIYEQVS 248
MAKPI RI S RNG SRK+ +RIPKGVI+ Q S
Sbjct: 1 MAKPIPRIGSRRNGRIGSRKSARRIPKGVIHVQAS 35
Score = 34.7 bits (78), Expect(3) = 4e-09
Identities = 18/26 (69%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = -3
Query: 257 ASFHNIIVMVTEVRG-LVSWISACTC 183
ASF+N IV VT+VRG +VSW SA TC
Sbjct: 34 ASFNNTIVTVTDVRGRVVSWSSAGTC 59
Score = 27.7 bits (60), Expect(3) = 4e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2
Query: 177 RGTRFAAQTAVGSAIGT 127
RGT FAAQTA G+AI T
Sbjct: 66 RGTPFAAQTAAGNAIRT 82
>ref|YP_004563900.1| ribosomal protein S11 [Nelumbo lutea]
gi|334362083|ref|YP_004564136.1| ribosomal protein S11
[Nelumbo nucifera] gi|224474168|gb|ACN49357.1| ribosomal
protein S11 [Nelumbo lutea] gi|224474256|gb|ACN49442.1|
ribosomal protein S11 [Nelumbo nucifera]
gi|290487492|gb|ADD30130.1| ribosomal protein S11
[Nelumbo nucifera] gi|383286830|gb|AFH01480.1| ribosomal
protein S11 (chloroplast) [Nelumbo nucifera]
gi|383286922|gb|AFH01571.1| ribosomal protein S11
(chloroplast) [Nelumbo lutea]
gi|519666944|gb|AGO98556.1| ribosomal protein S11
(chloroplast) [Nelumbo nucifera]
Length = 138
Score = 43.5 bits (101), Expect(3) = 4e-09
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = -1
Query: 352 MAKPI*RIDSCRNGGYCSRKNGQRIPKGVIYEQVS 248
MAKPI RI S RNG RK+G+RIPKGVI+ Q S
Sbjct: 1 MAKPIPRIGSRRNGRIGLRKSGRRIPKGVIHVQAS 35
Score = 34.7 bits (78), Expect(3) = 4e-09
Identities = 18/26 (69%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = -3
Query: 257 ASFHNIIVMVTEVRG-LVSWISACTC 183
ASF+N IV VT+VRG +VSW SA TC
Sbjct: 34 ASFNNTIVTVTDVRGRVVSWSSAGTC 59
Score = 27.7 bits (60), Expect(3) = 4e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2
Query: 177 RGTRFAAQTAVGSAIGT 127
RGT FAAQTA G+AI T
Sbjct: 66 RGTPFAAQTAAGNAIRT 82
>ref|YP_567110.1| ribosomal protein S11 [Vitis vinifera]
gi|224365678|ref|YP_002608405.1| ribosomal protein S11
[Vitis vinifera] gi|595789629|ref|YP_009019824.1|
ribosomal protein S11 (chloroplast) [Vitis rotundifolia]
gi|122224045|sp|Q0ZIY6.1|RR11_VITVI RecName: Full=30S
ribosomal protein S11, chloroplastic
gi|91701682|gb|ABE47566.1| ribosomal protein S11 [Vitis
vinifera] gi|147801377|emb|CAN61510.1| hypothetical
protein VITISV_000629 [Vitis vinifera]
gi|209954202|emb|CAQ77672.1| ribosomal protein S11
[Vitis vinifera] gi|239764722|gb|ACS15193.1| ribosomal
protein S11 [Vitis vinifera] gi|290487502|gb|ADD30135.1|
ribosomal protein S11 [Berberidopsis corallina]
gi|550533682|dbj|BAO01526.1| ribosomal protein S11
(chloroplast) [Vitis vinifera subsp. caucasica]
gi|550533768|dbj|BAO01610.1| ribosomal protein S11
(chloroplast) [Vitis vinifera subsp. caucasica]
gi|550533853|dbj|BAO01694.1| ribosomal protein S11
(chloroplast) [Vitis vinifera subsp. caucasica]
gi|586947446|gb|AHJ91243.1| ribosomal protein S11
(chloroplast) [Vitis rotundifolia]
Length = 138
Score = 43.5 bits (101), Expect(3) = 4e-09
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = -1
Query: 352 MAKPI*RIDSCRNGGYCSRKNGQRIPKGVIYEQVS 248
MAKPI RI S RNG SRK+ +RIPKGVI+ Q S
Sbjct: 1 MAKPIPRIGSRRNGRIGSRKSARRIPKGVIHVQAS 35
Score = 34.7 bits (78), Expect(3) = 4e-09
Identities = 18/26 (69%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = -3
Query: 257 ASFHNIIVMVTEVRG-LVSWISACTC 183
ASF+N IV VT+VRG +VSW SA TC
Sbjct: 34 ASFNNTIVTVTDVRGRVVSWSSAGTC 59
Score = 27.7 bits (60), Expect(3) = 4e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2
Query: 177 RGTRFAAQTAVGSAIGT 127
RGT FAAQTA G+AI T
Sbjct: 66 RGTPFAAQTAAGNAIRT 82
>ref|NP_904131.1| ribosomal protein S11 [Amborella trichopoda]
gi|62287446|sp|Q70XX6.1|RR11_AMBTC RecName: Full=30S
ribosomal protein S11, chloroplastic
gi|34481661|emb|CAD45139.1| ribosomal protein S11
[Amborella trichopoda]
Length = 138
Score = 45.8 bits (107), Expect(3) = 5e-09
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = -1
Query: 352 MAKPI*RIDSCRNGGYCSRKNGQRIPKGVIYEQVS 248
M KPI RI S RNG SRKNG+RIPKGVI+ Q S
Sbjct: 1 MKKPIPRIGSRRNGRIGSRKNGRRIPKGVIHVQAS 35
Score = 35.0 bits (79), Expect(3) = 5e-09
Identities = 18/26 (69%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = -3
Query: 257 ASFHNIIVMVTEVRG-LVSWISACTC 183
ASF+N IV VT+VRG +VSW SA TC
Sbjct: 34 ASFNNTIVTVTDVRGRVVSWCSAGTC 59
Score = 24.6 bits (52), Expect(3) = 5e-09
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2
Query: 177 RGTRFAAQTAVGSAIGT 127
RGT FAAQTA +AI T
Sbjct: 66 RGTPFAAQTAATNAIRT 82
>ref|YP_002720145.1| rps11 [Jatropha curcas] gi|224979597|gb|ACN72724.1| rps11 [Jatropha
curcas]
Length = 138
Score = 43.5 bits (101), Expect(3) = 5e-09
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -1
Query: 352 MAKPI*RIDSCRNGGYCSRKNGQRIPKGVIYEQVS 248
MAKP+ RI S RNG SRKN ++IPKGVI+ Q S
Sbjct: 1 MAKPLPRIGSRRNGRVGSRKNARKIPKGVIHVQAS 35
Score = 34.3 bits (77), Expect(3) = 5e-09
Identities = 17/26 (65%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = -3
Query: 257 ASFHNIIVMVTEVRG-LVSWISACTC 183
ASF+N IV VT+VRG ++SW SA TC
Sbjct: 34 ASFNNTIVTVTDVRGRVISWSSAGTC 59
Score = 27.7 bits (60), Expect(3) = 5e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2
Query: 177 RGTRFAAQTAVGSAIGT 127
RGT FAAQTA G+AI T
Sbjct: 66 RGTPFAAQTAAGNAIRT 82
>gb|ADD30141.1| ribosomal protein S11 [Heuchera sanguinea]
Length = 138
Score = 42.7 bits (99), Expect(3) = 6e-09
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -1
Query: 352 MAKPI*RIDSCRNGGYCSRKNGQRIPKGVIYEQVS 248
MAKPI RI S RNG SRK+ +R+PKGVI+ Q S
Sbjct: 1 MAKPIPRIGSRRNGRIGSRKSARRLPKGVIHVQAS 35
Score = 34.7 bits (78), Expect(3) = 6e-09
Identities = 18/26 (69%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = -3
Query: 257 ASFHNIIVMVTEVRG-LVSWISACTC 183
ASF+N IV VT+VRG +VSW SA TC
Sbjct: 34 ASFNNTIVTVTDVRGRVVSWSSAGTC 59
Score = 27.7 bits (60), Expect(3) = 6e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2
Query: 177 RGTRFAAQTAVGSAIGT 127
RGT FAAQTA G+AI T
Sbjct: 66 RGTPFAAQTAAGNAIRT 82
>ref|YP_001294131.1| ribosomal protein S11 [Chloranthus spicatus]
gi|172048691|sp|A6MMF5.1|RR11_CHLSC RecName: Full=30S
ribosomal protein S11, chloroplastic
gi|146744220|gb|ABQ43292.1| ribosomal protein S11
[Chloranthus spicatus]
Length = 138
Score = 45.8 bits (107), Expect(3) = 8e-09
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = -1
Query: 352 MAKPI*RIDSCRNGGYCSRKNGQRIPKGVIYEQVS 248
M KPI RI S +NG SRKNG+RIPKGVI+ Q S
Sbjct: 1 MTKPIPRIGSRKNGRISSRKNGRRIPKGVIHVQAS 35
Score = 31.2 bits (69), Expect(3) = 8e-09
Identities = 17/25 (68%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = -3
Query: 257 ASFHNIIVMVTEVRG-LVSWISACT 186
ASF+N IV VT+VRG +VSW SA T
Sbjct: 34 ASFNNTIVTVTDVRGRVVSWSSAGT 58
Score = 27.7 bits (60), Expect(3) = 8e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2
Query: 177 RGTRFAAQTAVGSAIGT 127
RGT FAAQTA G+AI T
Sbjct: 66 RGTPFAAQTAAGNAIRT 82
>ref|NP_054967.1| ribosomal protein S11 [Spinacia oleracea]
gi|19855077|sp|P06506.4|RR11_SPIOL RecName: Full=30S
ribosomal protein S11, chloroplastic
gi|7636140|emb|CAB88760.1| ribosomal protein S11
[Spinacia oleracea] gi|372000807|gb|AEX65480.1| 30S
ribosomal protein S11 [Anredera baselloides]
gi|372000811|gb|AEX65482.1| 30S ribosomal protein S11
[Didierea madagascariensis] gi|372000815|gb|AEX65484.1|
30S ribosomal protein S11 [Mollugo verticillata]
Length = 138
Score = 42.0 bits (97), Expect(3) = 8e-09
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = -1
Query: 352 MAKPI*RIDSCRNGGYCSRKNGQRIPKGVIYEQVS 248
MAKPI +I S RNG SRK+ ++IPKGVI+ Q S
Sbjct: 1 MAKPIPKIGSRRNGRISSRKSARKIPKGVIHVQAS 35
Score = 35.0 bits (79), Expect(3) = 8e-09
Identities = 18/26 (69%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = -3
Query: 257 ASFHNIIVMVTEVRG-LVSWISACTC 183
ASF+N IV VT+VRG +VSW SA TC
Sbjct: 34 ASFNNTIVTVTDVRGRVVSWASAGTC 59
Score = 27.7 bits (60), Expect(3) = 8e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2
Query: 177 RGTRFAAQTAVGSAIGT 127
RGT FAAQTA G+AI T
Sbjct: 66 RGTPFAAQTAAGNAIRT 82
>ref|YP_005089366.1| rps11 gene product (chloroplast) [Silene vulgaris]
gi|374249983|ref|YP_005089609.1| rps11 gene product
(chloroplast) [Silene latifolia]
gi|329755554|gb|AEC04117.1| ribosomal protein S11
(chloroplast) [Silene latifolia]
gi|329755719|gb|AEC04280.1| ribosomal protein S11
(chloroplast) [Silene vulgaris]
Length = 138
Score = 42.0 bits (97), Expect(3) = 8e-09
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = -1
Query: 352 MAKPI*RIDSCRNGGYCSRKNGQRIPKGVIYEQVS 248
MAKPI +I S RNG SRK+ ++IPKG+I+ Q S
Sbjct: 1 MAKPIPKISSRRNGRISSRKSARKIPKGIIHVQAS 35
Score = 35.0 bits (79), Expect(3) = 8e-09
Identities = 18/26 (69%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = -3
Query: 257 ASFHNIIVMVTEVRG-LVSWISACTC 183
ASF+N IV VT+VRG +VSW SA TC
Sbjct: 34 ASFNNTIVTVTDVRGRVVSWASAGTC 59
Score = 27.7 bits (60), Expect(3) = 8e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2
Query: 177 RGTRFAAQTAVGSAIGT 127
RGT FAAQTA G+AI T
Sbjct: 66 RGTPFAAQTAAGNAIRT 82
>emb|CAA27213.1| unnamed protein product [Spinacia oleracea]
Length = 138
Score = 42.0 bits (97), Expect(3) = 8e-09
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = -1
Query: 352 MAKPI*RIDSCRNGGYCSRKNGQRIPKGVIYEQVS 248
MAKPI +I S RNG SRK+ ++IPKGVI+ Q S
Sbjct: 1 MAKPIPKIGSRRNGRISSRKSARKIPKGVIHVQAS 35
Score = 35.0 bits (79), Expect(3) = 8e-09
Identities = 18/26 (69%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = -3
Query: 257 ASFHNIIVMVTEVRG-LVSWISACTC 183
ASF+N IV VT+VRG +VSW SA TC
Sbjct: 34 ASFNNTIVTVTDVRGRVVSWASAGTC 59
Score = 27.7 bits (60), Expect(3) = 8e-09
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2
Query: 177 RGTRFAAQTAVGSAIGT 127
RGT FAAQTA G+AI T
Sbjct: 66 RGTPFAAQTAAGNAIRT 82
>ref|XP_004173875.1| PREDICTED: DNA-directed RNA polymerase subunit alpha-like [Cucumis
sativus]
Length = 466
Score = 43.5 bits (101), Expect(3) = 1e-08
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = -1
Query: 352 MAKPI*RIDSCRNGGYCSRKNGQRIPKGVIYEQVS 248
MAKPI RI S RNG SRK+ +RIPKGVI+ Q S
Sbjct: 1 MAKPIPRIGSRRNGRISSRKSTRRIPKGVIHVQAS 35
Score = 34.3 bits (77), Expect(3) = 1e-08
Identities = 17/26 (65%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = -3
Query: 257 ASFHNIIVMVTEVRG-LVSWISACTC 183
ASF+N IV VT+VRG ++SW SA TC
Sbjct: 34 ASFNNTIVTVTDVRGRVISWSSAGTC 59
Score = 26.6 bits (57), Expect(3) = 1e-08
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -2
Query: 177 RGTRFAAQTAVGSAI 133
RGT FAAQTA G+AI
Sbjct: 66 RGTPFAAQTAAGNAI 80
>gb|AHM89651.1| ribosomal protein S11 (chloroplast) [Lagenaria siceraria]
gi|595646384|gb|AHM89828.1| ribosomal protein S11
(chloroplast) [Lagenaria siceraria]
gi|595646684|gb|AHM90123.1| ribosomal protein S11
(chloroplast) [Lagenaria siceraria]
gi|595647044|gb|AHM90477.1| ribosomal protein S11
(chloroplast) [Lagenaria siceraria]
gi|595647284|gb|AHM90713.1| ribosomal protein S11
(chloroplast) [Lagenaria siceraria]
gi|595647344|gb|AHM90772.1| ribosomal protein S11
(chloroplast) [Lagenaria siceraria]
gi|595647404|gb|AHM90831.1| ribosomal protein S11
(chloroplast) [Lagenaria siceraria]
gi|595647464|gb|AHM90890.1| ribosomal protein S11
(chloroplast) [Lagenaria siceraria]
gi|595647644|gb|AHM91067.1| ribosomal protein S11
(chloroplast) [Lagenaria siceraria]
Length = 140
Score = 43.5 bits (101), Expect(3) = 1e-08
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = -1
Query: 352 MAKPI*RIDSCRNGGYCSRKNGQRIPKGVIYEQVS 248
MAKPI RI S RNG SRK+ +RIPKGVI+ Q S
Sbjct: 1 MAKPIPRIGSRRNGRISSRKSTRRIPKGVIHVQAS 35
Score = 34.3 bits (77), Expect(3) = 1e-08
Identities = 17/26 (65%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = -3
Query: 257 ASFHNIIVMVTEVRG-LVSWISACTC 183
ASF+N IV VT+VRG ++SW SA TC
Sbjct: 34 ASFNNTIVTVTDVRGRVISWSSAGTC 59
Score = 26.6 bits (57), Expect(3) = 1e-08
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -2
Query: 177 RGTRFAAQTAVGSAI 133
RGT FAAQTA G+AI
Sbjct: 66 RGTPFAAQTAAGNAI 80
>ref|YP_002836123.1| ribosomal protein S11 [Megaleranthis saniculifolia]
gi|226933915|gb|ACO92048.1| ribosomal protein S11
[Megaleranthis saniculifolia]
Length = 138
Score = 44.7 bits (104), Expect(3) = 1e-08
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = -1
Query: 352 MAKPI*RIDSCRNGGYCSRKNGQRIPKGVIYEQVS 248
MAK I RI S RNG SRKNG+RIPKGVI+ Q S
Sbjct: 1 MAKTIPRIGSRRNGRIGSRKNGRRIPKGVIHVQAS 35
Score = 34.3 bits (77), Expect(3) = 1e-08
Identities = 17/26 (65%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = -3
Query: 257 ASFHNIIVMVTEVRG-LVSWISACTC 183
ASF+N IV VT++RG +VSW SA TC
Sbjct: 34 ASFNNTIVTVTDIRGRVVSWSSAGTC 59
Score = 25.4 bits (54), Expect(3) = 1e-08
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2
Query: 177 RGTRFAAQTAVGSAIGT 127
RGT FAAQTA +AI T
Sbjct: 66 RGTPFAAQTAAANAIRT 82