BLASTX nr result
ID: Akebia25_contig00057091
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00057091
(599 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006854251.1| hypothetical protein AMTR_s00039p00023570 [A... 169 4e-40
ref|XP_007039119.1| Tetratricopeptide repeat-like superfamily pr... 157 2e-36
ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containi... 154 2e-35
ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containi... 152 7e-35
gb|AEP33771.1| organelle transcript processing 82, partial [Thla... 152 7e-35
ref|XP_006836656.1| hypothetical protein AMTR_s00088p00046280 [A... 150 3e-34
ref|XP_002892433.1| pentatricopeptide repeat-containing protein ... 150 3e-34
ref|XP_006441165.1| hypothetical protein CICLE_v10019244mg [Citr... 149 4e-34
gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygr... 149 6e-34
gb|AEP33760.1| organelle transcript processing 82, partial [Caps... 148 1e-33
ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Caps... 148 1e-33
ref|XP_007036762.1| Tetratricopeptide repeat (TPR)-like superfam... 147 2e-33
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi... 147 2e-33
ref|XP_001764438.1| predicted protein [Physcomitrella patens] gi... 147 2e-33
gb|AEP33772.1| organelle transcript processing 82, partial [Drab... 147 2e-33
ref|XP_006364895.1| PREDICTED: pentatricopeptide repeat-containi... 147 3e-33
ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containi... 147 3e-33
ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containi... 147 3e-33
emb|CBI15551.3| unnamed protein product [Vitis vinifera] 147 3e-33
ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containi... 147 3e-33
>ref|XP_006854251.1| hypothetical protein AMTR_s00039p00023570 [Amborella trichopoda]
gi|548857927|gb|ERN15718.1| hypothetical protein
AMTR_s00039p00023570 [Amborella trichopoda]
Length = 698
Score = 169 bits (429), Expect = 4e-40
Identities = 87/180 (48%), Positives = 126/180 (70%)
Frame = +1
Query: 52 NTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLYLSMNK 231
N++I Y + G + A+++FD M ++D +SWN+MISG+ QNG +EA +++SM +
Sbjct: 80 NSLISMYAKWGRIDIAEKVFDNMG----ERDLVSWNAMISGFCQNGFGTEALGVFVSMKR 135
Query: 232 VGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFRLGTSIVDMYSKCGKVE 411
V + VT LGL+ ACG +RNLD G S+H L G LS+ + TSI+DMY+KC +V+
Sbjct: 136 EKTWVFNEVTLLGLVQACGLSRNLDSGASLHAHLTGLGFLSNVWIKTSIMDMYAKCSRVD 195
Query: 412 CSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAITIANVVPA 591
+ +F EEL ++SLVSWNSLI GY QNGY+ EA+ LF ML+D+ ++PD IT+ANV+PA
Sbjct: 196 YATKVF-EELHDKSLVSWNSLIAGYCQNGYEIEALELFHLMLQDTYLRPDCITMANVLPA 254
Score = 98.6 bits (244), Expect = 1e-18
Identities = 61/178 (34%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
Frame = +1
Query: 70 YCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLYLSMNKVGNLVP 249
Y + V A ++F+E+ K +SWNS+I+GY QNG EA +L+ M + L P
Sbjct: 188 YAKCSRVDYATKVFEELH----DKSLVSWNSLIAGYCQNGYEIEALELFHLMLQDTYLRP 243
Query: 250 SRVTFLGLILACGQARNLDMGMSIHGRLVHSG--LLSDFRLGTSIVDMYSKCGKVECSRV 423
+T ++ A +L +G IHG ++ G L SDF L T I+DMY+KC +E
Sbjct: 244 DCITMANVLPAYIGLGDLQLGQCIHGFIIKQGFDLNSDFVLATVIIDMYAKCLDIESGFE 303
Query: 424 IFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAITIANVVPACA 597
+F L +L SWN++I G+ N + + LF +ML+ ++ PD++T+ ++ AC+
Sbjct: 304 LF-MILDNPTLASWNAMIFGFVLNCQASDGLRLFNQMLQSGHM-PDSVTVTAILQACS 359
Score = 93.2 bits (230), Expect = 5e-17
Identities = 57/187 (30%), Positives = 97/187 (51%)
Frame = +1
Query: 37 NLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLY 216
+L N ++ Y + G + AK LF+ M +K+ +S+N++I G A+ G E F+L+
Sbjct: 383 SLCVSNALLDMYVKWGRLEIAKVLFNNMH----EKNCVSYNTIIFGNAKVGLPIETFELF 438
Query: 217 LSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFRLGTSIVDMYSK 396
M + + +G++ AC ++ +L +G SIH +++ G D + S++DMY+K
Sbjct: 439 NEMRYENQHEQASIAIIGVLQACARSGDLRLGESIHTQVLKCGFQCDNFVTNSLMDMYAK 498
Query: 397 CGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAITIA 576
CG + +F + R SWN +I +GY EA L D V PD+IT
Sbjct: 499 CGSFNSAHHLFNQFGPVRETSSWNVMIAACGIHGYGKEACHLMENAENDGYV-PDSITFV 557
Query: 577 NVVPACA 597
N++ AC+
Sbjct: 558 NLLSACS 564
Score = 88.6 bits (218), Expect = 1e-15
Identities = 48/152 (31%), Positives = 87/152 (57%)
Frame = +1
Query: 139 KDTISWNSMISGYAQNGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMS 318
+D++S+N +I G+ NG EA ++ M +G P + + + R GMS
Sbjct: 4 EDSVSYNVIIRGFGLNGFEEEALMVFNRMVGLG-FSPCSFAVKSALQSSAELRYFREGMS 62
Query: 319 IHGRLVHSGLLSDFRLGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNG 498
IHG ++ +GL+ + + S++ MY+K G+++ + +F+ + ER LVSWN++I G+ QNG
Sbjct: 63 IHGYVLRNGLVPETSVCNSLISMYAKWGRIDIAEKVFDN-MGERDLVSWNAMISGFCQNG 121
Query: 499 YDYEAVFLFRRMLRDSNVKPDAITIANVVPAC 594
+ EA+ +F M R+ + +T+ +V AC
Sbjct: 122 FGTEALGVFVSMKREKTWVFNEVTLLGLVQAC 153
Score = 76.6 bits (187), Expect = 5e-12
Identities = 45/150 (30%), Positives = 83/150 (55%), Gaps = 1/150 (0%)
Frame = +1
Query: 151 SWNSMISGYAQNGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGR 330
SWN+MI G+ N S+ L+ M + G++ P VT ++ AC + +G+SIH
Sbjct: 315 SWNAMIFGFVLNCQASDGLRLFNQMLQSGHM-PDSVTVTAILQACSVLGSSRLGLSIHSF 373
Query: 331 LV-HSGLLSDFRLGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDY 507
++ + + + +++DMY K G++E ++V+F + E++ VS+N++I G ++ G
Sbjct: 374 ILRRNSMALSLCVSNALLDMYVKWGRLEIAKVLF-NNMHEKNCVSYNTIIFGNAKVGLPI 432
Query: 508 EAVFLFRRMLRDSNVKPDAITIANVVPACA 597
E LF M ++ + +I I V+ ACA
Sbjct: 433 ETFELFNEMRYENQHEQASIAIIGVLQACA 462
>ref|XP_007039119.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao] gi|508776364|gb|EOY23620.1|
Tetratricopeptide repeat-like superfamily protein,
putative [Theobroma cacao]
Length = 831
Score = 157 bits (398), Expect = 2e-36
Identities = 88/233 (37%), Positives = 126/233 (54%), Gaps = 34/233 (14%)
Frame = +1
Query: 1 SAMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYA 180
SA +FSKFSV+N+V+ NT+IVG CENG V KAKELFD ME++ +KKD ISWNSMISGY
Sbjct: 331 SAFHLFSKFSVKNVVSCNTVIVGSCENGNVCKAKELFDRMEIMAIKKDIISWNSMISGYV 390
Query: 181 QNGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDF 360
N + EA DL+ + + P T ++ AC +L +G IH + + GL S+
Sbjct: 391 NNSLFDEALDLFKHVLMEDGIEPDSFTLGSVLTACADTGSLRLGKGIHSQAIVRGLQSNT 450
Query: 361 RLGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLR 540
+G ++V+MY KC + +++ F E+ ER +WN+LI GY++ + L R+M
Sbjct: 451 FVGGALVEMYCKCQDLRAAQIAF-NEVTERDTATWNALISGYARCNQIEDIQHLLRKMNE 509
Query: 541 D----------------------------------SNVKPDAITIANVVPACA 597
D SNV+PD TI ++PAC+
Sbjct: 510 DGFKPNVYTWNGIIAGHVENDLHDKAMQLIFEMQTSNVRPDIYTIGIILPACS 562
Score = 102 bits (254), Expect = 8e-20
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 35/233 (15%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEME-LVGLKKDTISWNSMISGYA 180
A KV ++ V++N ++ NG+V +A F+ M L+ + +SW+++I G++
Sbjct: 195 AKKVLETIPEKDRVSWNAVVTACATNGKVYEALGFFERMSSFENLRPNLVSWSAVIGGFS 254
Query: 181 QNGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDF 360
QN EA ++ M G + P+ T ++ AC + +NL +G HG + +S+
Sbjct: 255 QNCYDEEAIEMLFRMVGEG-IEPNAQTLASVLPACARLQNLSLGKEFHGYITRHRFMSNA 313
Query: 361 RLGTSIVDMYSKCGK----------------VECSRVIF----------EEELLER---- 450
+ ++D+Y +CG V C+ VI +EL +R
Sbjct: 314 IVVNGLIDLYRRCGDMKSAFHLFSKFSVKNVVSCNTVIVGSCENGNVCKAKELFDRMEIM 373
Query: 451 ----SLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAITIANVVPACA 597
++SWNS+I GY N EA+ LF+ +L + ++PD+ T+ +V+ ACA
Sbjct: 374 AIKKDIISWNSMISGYVNNSLFDEALDLFKHVLMEDGIEPDSFTLGSVLTACA 426
Score = 97.1 bits (240), Expect = 3e-18
Identities = 53/199 (26%), Positives = 106/199 (53%), Gaps = 1/199 (0%)
Frame = +1
Query: 1 SAMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYA 180
+A F++ + R+ +N +I GY ++ + L +M G K + +WN +I+G+
Sbjct: 468 AAQIAFNEVTERDTATWNALISGYARCNQIEDIQHLLRKMNEDGFKPNVYTWNGIIAGHV 527
Query: 181 QNGNWSEAFDLYLSMNKVGNLVPSRVTFLGLIL-ACGQARNLDMGMSIHGRLVHSGLLSD 357
+N +A L M + N+ P T +G+IL AC ++ + G +H + G +D
Sbjct: 528 ENDLHDKAMQLIFEM-QTSNVRPDIYT-IGIILPACSRSATIARGKQVHAYSIRCGYDAD 585
Query: 358 FRLGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRML 537
+G ++VDMY+KCG + + + + + + +LVS N+++ Y+ +G+ + + L R ML
Sbjct: 586 VYIGAALVDMYAKCGSIHHAPLAY-NRISDPNLVSHNAMLTAYAMHGHGEDGIALIRGML 644
Query: 538 RDSNVKPDAITIANVVPAC 594
+ +PD +T + + +C
Sbjct: 645 A-NGFRPDQVTFLSALSSC 662
Score = 90.1 bits (222), Expect = 4e-16
Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 35/211 (16%)
Frame = +1
Query: 70 YCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLYLSMNKVGNLVP 249
Y + G + A LFD+M L ++ SW +M+ Y G + EAF L+ + ++ L+
Sbjct: 85 YAKFGSLEDADLLFDKMAL----RNLYSWTAMLRLYVDYGLFEEAFRLFEKL-QLEELLL 139
Query: 250 SRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFRLGTSIVDMYSKCGKVECSRVIF 429
F ++ C N+++G +HG L+ + + +G +++DMY KCG ++ ++ +
Sbjct: 140 DFFVFPVVLKICSGLGNVEVGRQLHGILIKYQFVLNVYVGNALIDMYGKCGSLDDAKKVL 199
Query: 430 EE-----------------------------------ELLERSLVSWNSLIMGYSQNGYD 504
E E L +LVSW+++I G+SQN YD
Sbjct: 200 ETIPEKDRVSWNAVVTACATNGKVYEALGFFERMSSFENLRPNLVSWSAVIGGFSQNCYD 259
Query: 505 YEAVFLFRRMLRDSNVKPDAITIANVVPACA 597
EA+ + RM+ + ++P+A T+A+V+PACA
Sbjct: 260 EEAIEMLFRMVGE-GIEPNAQTLASVLPACA 289
>ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 154 bits (388), Expect = 2e-35
Identities = 87/233 (37%), Positives = 135/233 (57%), Gaps = 34/233 (14%)
Frame = +1
Query: 1 SAMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYA 180
SA+K+FS FSV+N+V++NTMIVGYCENG V KAKELFD+MELVG KDTISWNSMISGYA
Sbjct: 195 SALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVG--KDTISWNSMISGYA 252
Query: 181 QNGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDF 360
N + EA ++ + + T ++ AC +L G +H + V GL +
Sbjct: 253 DNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNT 312
Query: 361 RLGTSIVDMYSKCGKVECSRVIFE--------------------------EELLER---- 450
+G ++V+MYSKC ++ +++ F+ + L+++
Sbjct: 313 FVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGD 372
Query: 451 ----SLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAITIANVVPACA 597
++ +WN +I G+ +NG++ A+ LF M + S+++PD T+ ++PACA
Sbjct: 373 GFEPNVYTWNGIISGHVENGHNELALRLFTEM-QTSSLRPDIYTVGIILPACA 424
Score = 101 bits (251), Expect = 2e-19
Identities = 57/199 (28%), Positives = 107/199 (53%), Gaps = 1/199 (0%)
Frame = +1
Query: 1 SAMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYA 180
+A F + R+ +N +I GY ++ + L +M+ G + + +WN +ISG+
Sbjct: 330 AAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHV 389
Query: 181 QNGNWSEAFDLYLSMNKVGNLVPSRVTFLGLIL-ACGQARNLDMGMSIHGRLVHSGLLSD 357
+NG+ A L+ M + +L P T +G+IL AC + + G +H + G D
Sbjct: 390 ENGHNELALRLFTEM-QTSSLRPDIYT-VGIILPACARLATIARGKQVHAHSIRQGYELD 447
Query: 358 FRLGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRML 537
+G ++VDMY+KCG ++ + ++ + +LVS N+++ Y+ +G+ E + LFR ML
Sbjct: 448 VHIGAALVDMYAKCGSIKHAMQVY-NRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNML 506
Query: 538 RDSNVKPDAITIANVVPAC 594
+ +PD +T +V+ +C
Sbjct: 507 -GNGFRPDHVTFLSVLSSC 524
Score = 73.6 bits (179), Expect = 4e-11
Identities = 49/179 (27%), Positives = 94/179 (52%), Gaps = 17/179 (9%)
Frame = +1
Query: 112 DEMELVGLK---KDTISWNSMISGYAQNGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILA 282
D+ LV +K ++ SW +++S + +G + EA L+ + ++ ++ F ++
Sbjct: 111 DDANLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKL-QLDDIGLEFFVFPVVLKL 169
Query: 283 CGQARNLDMGMSIHG----RLVHSGLLSDFRLGTSIVDM---------YSKCGKVECSRV 423
CG R L++G +HG R G G S+ ++ Y + G VE ++
Sbjct: 170 CGGLRVLELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKE 229
Query: 424 IFEE-ELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAITIANVVPACA 597
+F++ EL+ + +SWNS+I GY+ N EA+ +FR +L + ++ D+ T+ +V+ ACA
Sbjct: 230 LFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACA 288
>ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 152 bits (384), Expect = 7e-35
Identities = 76/198 (38%), Positives = 127/198 (64%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A +VF +RNL ++N M+ GY + GE+ A+E+F +M L KD +SW++MI G+A
Sbjct: 191 AEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPL----KDDVSWSTMIVGFAH 246
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
NGN+++AF + + + G + P+ V+ G++ AC QA + G +HG + SG L
Sbjct: 247 NGNFNDAFAFFREVRREG-MRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIIS 305
Query: 364 LGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRD 543
+ +++D YSKCG ++ +R++F + +L RS VSW ++I G + +GY EA+ LF M +
Sbjct: 306 VNNALIDTYSKCGNLDMARLVF-DNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEM-EE 363
Query: 544 SNVKPDAITIANVVPACA 597
SN+KPD+IT +++ AC+
Sbjct: 364 SNIKPDSITFISILYACS 381
Score = 71.6 bits (174), Expect = 2e-10
Identities = 48/179 (26%), Positives = 92/179 (51%), Gaps = 2/179 (1%)
Frame = +1
Query: 52 NTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLYLSMNK 231
N +I Y + G + A+ +FD M L++ +SW +MI+G A +G EA L+ M +
Sbjct: 308 NALIDTYSKCGNLDMARLVFDNM----LRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEE 363
Query: 232 VGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHS-GLLSDFRLGTSIVDMYSKCGKV 408
N+ P +TF+ ++ AC A +D+G S R+V++ G+ +VD+Y + GK+
Sbjct: 364 -SNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKL 422
Query: 409 ECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLR-DSNVKPDAITIANV 582
+ + + + + + W +L+ S +G Y A + R++ D D + ++N+
Sbjct: 423 QQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNI 481
Score = 65.5 bits (158), Expect = 1e-08
Identities = 32/112 (28%), Positives = 63/112 (56%)
Frame = +1
Query: 142 DTISWNSMISGYAQNGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSI 321
D +N++I G + + S A L++ M + +P +F L+ A R L G+ +
Sbjct: 69 DVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQL 128
Query: 322 HGRLVHSGLLSDFRLGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLI 477
H V GL S +GT+++ MY++C + +R +F +E++E ++V+WN+++
Sbjct: 129 HCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVF-DEMIEPNIVAWNAIV 179
>gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 152 bits (384), Expect = 7e-35
Identities = 78/198 (39%), Positives = 129/198 (65%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A KVF + S R++V++ +I GY +G + A+E+FDE+ + KD +SWN+MISGYA+
Sbjct: 120 AHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPV----KDVVSWNAMISGYAE 175
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
G++ EA +L+ M K N+ P T + ++ AC Q+R++++G +H + G S+ +
Sbjct: 176 TGSYKEALELFKEMMKT-NVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLK 234
Query: 364 LGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRD 543
+ +++D+YSKCG+VE + +F E L + +VSWN+LI GY+ EA+ LF+ MLR
Sbjct: 235 IVNALIDLYSKCGQVETACGLF-EGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLR- 292
Query: 544 SNVKPDAITIANVVPACA 597
S P+ +TI +++PACA
Sbjct: 293 SGESPNDVTIVSILPACA 310
Score = 79.3 bits (194), Expect = 7e-13
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 30/228 (13%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A+ VF+ N + +NTM+ GY L D +S
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGY-------------------ALSSDPVS---------- 49
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
A LY+ M +G L+P+ TF L+ +C +++ + G IHG ++ G D
Sbjct: 50 ------ALKLYVVMISLG-LLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLY 102
Query: 364 LGTSIVDMYSKCGKVECSRVIFE------------------------------EELLERS 453
+ TS++ MY++ G++E + +F+ +E+ +
Sbjct: 103 VHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKD 162
Query: 454 LVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAITIANVVPACA 597
+VSWN++I GY++ G EA+ LF+ M++ +NV+PD T+ V+ ACA
Sbjct: 163 VVSWNAMISGYAETGSYKEALELFKEMMK-TNVRPDEGTMVTVLSACA 209
Score = 66.6 bits (161), Expect = 5e-09
Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 7/196 (3%)
Frame = +1
Query: 31 VRNLVAFNTMIVG-YCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAF 207
V N + T ++ Y + G++ A ++F+ M L K SWN+MI G+A +G + F
Sbjct: 332 VTNAPSLRTSLIDMYAKCGDIEAAHQVFNSM----LHKSLSSWNAMIFGFAMHGRANAGF 387
Query: 208 DLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFRLGTSI--- 378
DL+ M K G + P +TF+GL+ AC + LD+ GR + + D+ + +
Sbjct: 388 DLFSRMRKNG-IEPDDITFVGLLSACSHSGKLDL-----GRHIFKSMTQDYDITPKLEHY 441
Query: 379 ---VDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSN 549
+D+ G + ++ + + +E V W SL+ ++G A R +++
Sbjct: 442 GCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEP 501
Query: 550 VKPDAITIANVVPACA 597
P + + + + A A
Sbjct: 502 ENPGSYVLLSNIYATA 517
>ref|XP_006836656.1| hypothetical protein AMTR_s00088p00046280 [Amborella trichopoda]
gi|548839216|gb|ERM99509.1| hypothetical protein
AMTR_s00088p00046280 [Amborella trichopoda]
Length = 602
Score = 150 bits (378), Expect = 3e-34
Identities = 74/195 (37%), Positives = 121/195 (62%)
Frame = +1
Query: 13 VFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGN 192
+F R++V++NTMI GY + G + KA+++F+EM +K+ +SWNS+ISG QNG
Sbjct: 379 IFKTMIHRDVVSWNTMITGYSQIGNMQKAQKMFEEMR----EKNVVSWNSVISGCTQNGL 434
Query: 193 WSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFRLGT 372
+ EA + ++SM ++ + T+ ++ AC L G +HG ++ SG D +G
Sbjct: 435 YIEALNYFVSMLRLHEKLEC-ATYASVLSACSGLAALQCGKQVHGLIIKSGYFPDLFVGN 493
Query: 373 SIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNV 552
+++ MY+KCGKV C+ F E ++E VSWNSLI GY+ +G +A+ LF RM +++++
Sbjct: 494 ALIAMYAKCGKVSCAEQAFRE-MVEMDAVSWNSLIAGYASHGLGEDAIKLFERMQKEASI 552
Query: 553 KPDAITIANVVPACA 597
PD IT V+ AC+
Sbjct: 553 APDEITFVGVLSACS 567
Score = 83.2 bits (204), Expect = 5e-14
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 26/224 (11%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A ++F RNLVA+N MI GY N + A E+F +M +++++SW S+I+G+ Q
Sbjct: 252 AHELFETMPERNLVAWNAMIAGYVHNSMIDDAYEIFSKMP----ERNSLSWASIINGFVQ 307
Query: 184 NGNWSEAFDLYLSM----------NKVGNL----------------VPSRVTFLGLILAC 285
G+ +A L M VG + P V + +I
Sbjct: 308 VGSLVKARTLLERMPCKSVVAETAMMVGYVQNARIEEARHLFDCISSPDVVCYNTMISGY 367
Query: 286 GQARNLDMGMSIHGRLVHSGLLSDFRLGTSIVDMYSKCGKVECSRVIFEEELLERSLVSW 465
Q +D I ++H ++S +++ YS+ G ++ ++ +F EE+ E+++VSW
Sbjct: 368 AQCGRMDEAECIFKTMIHRDVVS----WNTMITGYSQIGNMQKAQKMF-EEMREKNVVSW 422
Query: 466 NSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAITIANVVPACA 597
NS+I G +QNG EA+ F MLR + K + T A+V+ AC+
Sbjct: 423 NSVISGCTQNGLYIEALNYFVSMLR-LHEKLECATYASVLSACS 465
Score = 72.8 bits (177), Expect = 7e-11
Identities = 51/195 (26%), Positives = 96/195 (49%), Gaps = 24/195 (12%)
Frame = +1
Query: 40 LVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLYL 219
L + N I Y + G + A LF++M K+T++WN+MIS Y+++G S+A L++
Sbjct: 16 LFSQNLKITNYTKAGRLRDAVALFEKMT----HKNTVTWNAMISAYSKSGKLSDARSLFV 71
Query: 220 SM------------------------NKVGNLVPSRVTFLGLILACGQARNLDMGMSIHG 327
M + + + +P R + ++ G A N +GM+
Sbjct: 72 RMPSRNIVSWNAMLSGYMNHGHVKEASSLFDAMPMRDAYTWTLMITGYANNGQLGMA--K 129
Query: 328 RLVHSGLLSDFRLGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDY 507
+L D L ++V Y++ G++ +R +F + + ++ + SWN+++ GYS+ G
Sbjct: 130 KLFVMAPNHDIPLWNAMVSGYARNGRLTEARELF-DTMPQKDVFSWNTMLSGYSRYGEAK 188
Query: 508 EAVFLFRRMLRDSNV 552
EA+FLF +M + V
Sbjct: 189 EALFLFEKMPQKDGV 203
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/90 (34%), Positives = 54/90 (60%)
Frame = +1
Query: 37 NLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLY 216
+L N +I Y + G+V+ A++ F EM ++ D +SWNS+I+GYA +G +A L+
Sbjct: 488 DLFVGNALIAMYAKCGKVSCAEQAFREM----VEMDAVSWNSLIAGYASHGLGEDAIKLF 543
Query: 217 LSMNKVGNLVPSRVTFLGLILACGQARNLD 306
M K ++ P +TF+G++ AC + +D
Sbjct: 544 ERMQKEASIAPDEITFVGVLSACSHSGLID 573
>ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338275|gb|EFH68692.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 741
Score = 150 bits (378), Expect = 3e-34
Identities = 76/198 (38%), Positives = 128/198 (64%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A KVF + R++V++ +I GY G + A++LFDE+ + KD +SWN+MISGYA+
Sbjct: 188 ARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPV----KDVVSWNAMISGYAE 243
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
GN+ EA +L+ M K N+ P T + ++ AC Q+ ++++G +H + G S+ +
Sbjct: 244 TGNYKEALELFKEMMKT-NIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLK 302
Query: 364 LGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRD 543
+ S++D+YSKCG++E + +F E LL + ++SWN+LI GY+ EA+ LF+ MLR
Sbjct: 303 IVNSLMDLYSKCGELETACGLF-EGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR- 360
Query: 544 SNVKPDAITIANVVPACA 597
S +P+ +T+ +++PACA
Sbjct: 361 SGERPNDVTMLSILPACA 378
Score = 105 bits (262), Expect = 1e-20
Identities = 68/191 (35%), Positives = 105/191 (54%), Gaps = 4/191 (2%)
Frame = +1
Query: 37 NLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLY 216
NL N+++ Y + GE+ A LF+ + L KD ISWN++I GY + EA L+
Sbjct: 300 NLKIVNSLMDLYSKCGELETACGLFEGL----LYKDVISWNTLIGGYTHMNLYKEALLLF 355
Query: 217 LSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIH----GRLVHSGLLSDFRLGTSIVD 384
M + G P+ VT L ++ AC +D+G IH RL + S R TS++D
Sbjct: 356 QEMLRSGER-PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLR--TSLID 412
Query: 385 MYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDA 564
MY+KCG +E + +F +L +SL SWN++I G++ +G A +F RM R ++PD
Sbjct: 413 MYAKCGDIEAAHQVFNS-ILHKSLSSWNAMIFGFAMHGRADAAFDIFSRM-RKIGIEPDD 470
Query: 565 ITIANVVPACA 597
IT ++ AC+
Sbjct: 471 ITFVGLLSACS 481
Score = 87.8 bits (216), Expect = 2e-15
Identities = 52/178 (29%), Positives = 93/178 (52%), Gaps = 30/178 (16%)
Frame = +1
Query: 154 WNSMISGYAQNGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRL 333
WN+M G+A + + A LY+ M +G L+P+ TF L+ +C +++ G IHG +
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLG-LLPNSYTFPFLLKSCAKSKAFKEGQQIHGHV 160
Query: 334 VHSGLLSDFRLGTSIVDMYSKCGKVECSRVIFE--------------------------- 432
+ G D + TS++ +Y + G++E +R +F+
Sbjct: 161 LKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQ 220
Query: 433 ---EELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAITIANVVPACA 597
+E+ + +VSWN++I GY++ G EA+ LF+ M++ +N++PD T+ VV ACA
Sbjct: 221 KLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMK-TNIRPDESTMVTVVSACA 277
Score = 64.3 bits (155), Expect = 2e-08
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Frame = +1
Query: 28 SVRNLVAFNTMIVG-YCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEA 204
S N + T ++ Y + G++ A ++F+ + L K SWN+MI G+A +G A
Sbjct: 399 SATNASSLRTSLIDMYAKCGDIEAAHQVFNSI----LHKSLSSWNAMIFGFAMHGRADAA 454
Query: 205 FDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFRLGTSI-- 378
FD++ M K+G + P +TF+GL+ AC ++ LD+ GR + + D+++ +
Sbjct: 455 FDIFSRMRKIG-IEPDDITFVGLLSACSRSGMLDL-----GRHIFRTMTQDYKITPKLEH 508
Query: 379 ----VDMYSKCGKVECSRVIFEEELLERSLVSWNSLI 477
+D+ G + + + +E V W SL+
Sbjct: 509 YGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLL 545
>ref|XP_006441165.1| hypothetical protein CICLE_v10019244mg [Citrus clementina]
gi|557543427|gb|ESR54405.1| hypothetical protein
CICLE_v10019244mg [Citrus clementina]
Length = 645
Score = 149 bits (377), Expect = 4e-34
Identities = 74/195 (37%), Positives = 122/195 (62%)
Frame = +1
Query: 1 SAMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYA 180
SA K+FSKFS++N V+ NT+IVGYCENG V++A+ELFD+ME +G+++ ISWNSMISGY
Sbjct: 147 SAFKIFSKFSIKNEVSCNTIIVGYCENGNVSEARELFDQMEHLGVQRGIISWNSMISGYV 206
Query: 181 QNGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDF 360
N + EAF ++ + + P+ TF +++AC +L G IH + GL SD
Sbjct: 207 DNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACADMNSLRKGKEIHALAIALGLQSDT 266
Query: 361 RLGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLR 540
+G ++V+MY +C + +++ F +E++ER +WN LI GY+ + + E + ++
Sbjct: 267 FVGGALVEMYCRCQDLVAAQMAF-DEVIERDSATWNCLISGYA-HCHQIENIENLLGKMK 324
Query: 541 DSNVKPDAITIANVV 585
+ +P+ T ++
Sbjct: 325 EDGFEPNVYTWNGII 339
Score = 105 bits (263), Expect = 7e-21
Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 35/233 (15%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEME-LVGLKKDTISWNSMISGYA 180
A KVF R+ V++N+++ NG V +A E + M L + +SW+++I G+A
Sbjct: 11 AKKVFKMMPERDCVSWNSVVTACAANGLVLEALECLERMSSLDNETPNLVSWSAVIGGFA 70
Query: 181 QNGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDF 360
QNG EA + M G L P+ T ++ AC + +NL +G HG + +G +S+
Sbjct: 71 QNGYDEEAIGMLFRMQAEG-LEPNAWTLSSVLPACARLQNLSLGKEFHGYITRNGFMSNP 129
Query: 361 RLGTSIVDMYSKCG----------------KVECSRVI------------------FEEE 438
+ +VD+Y +CG +V C+ +I E
Sbjct: 130 FVVNGLVDVYRRCGDMLSAFKIFSKFSIKNEVSCNTIIVGYCENGNVSEARELFDQMEHL 189
Query: 439 LLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAITIANVVPACA 597
++R ++SWNS+I GY N EA +FR +L ++P + T +V+ ACA
Sbjct: 190 GVQRGIISWNSMISGYVDNSLYDEAFSMFRDLLMRDGIEPTSFTFGSVLIACA 242
Score = 105 bits (262), Expect = 1e-20
Identities = 56/198 (28%), Positives = 106/198 (53%)
Frame = +1
Query: 1 SAMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYA 180
+A F + R+ +N +I GY ++ + L +M+ G + + +WN +I+G+
Sbjct: 284 AAQMAFDEVIERDSATWNCLISGYAHCHQIENIENLLGKMKEDGFEPNVYTWNGIIAGHV 343
Query: 181 QNGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDF 360
+N + A L+L M + +L P T ++ AC ++ G +H + G SD
Sbjct: 344 ENEHHDRAMQLFLEMLSL-DLTPDIYTVGIILSACSSLATMERGKQVHAYAIRCGYDSDV 402
Query: 361 RLGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLR 540
+GT++VDMY+KCG ++ +R+ + + + LVS N+++ Y+ +G+ E + FRR+L
Sbjct: 403 HIGTALVDMYAKCGSLKHARLAY-KRISTPDLVSQNAMLTAYAMHGHGKEGIAHFRRILA 461
Query: 541 DSNVKPDAITIANVVPAC 594
S +PD I+ + + AC
Sbjct: 462 -SGFRPDHISFLSALSAC 478
>gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 149 bits (376), Expect = 6e-34
Identities = 80/197 (40%), Positives = 126/197 (63%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A +VFSK +N+VA+ +++ Y + G++T A+++F EM ++ +SWN MI+GYAQ
Sbjct: 440 AEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMST----RNVVSWNLMIAGYAQ 495
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
+G+ ++ F+L SM KV P RVT + ++ ACG L+ G +H V GL SD
Sbjct: 496 SGDIAKVFELLSSM-KVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTV 554
Query: 364 LGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRD 543
+ TS++ MYSKCG+V +R +F +++ R V+WN+++ GY Q+G EAV LF+RML++
Sbjct: 555 VATSLIGMYSKCGEVTEARTVF-DKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKE 613
Query: 544 SNVKPDAITIANVVPAC 594
V P+ IT V+ AC
Sbjct: 614 -RVPPNEITFTAVISAC 629
Score = 112 bits (281), Expect = 6e-23
Identities = 60/181 (33%), Positives = 112/181 (61%)
Frame = +1
Query: 52 NTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLYLSMNK 231
N++I Y + G+V +++F M L +D ++W+SMI+ YA N + ++AFD + M K
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTL----RDVVTWSSMIAAYAGNNHPAKAFDTFERM-K 171
Query: 232 VGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFRLGTSIVDMYSKCGKVE 411
N+ P+R+TFL ++ AC L+ IH + SG+ +D + T+++ MYSKCG++
Sbjct: 172 DANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEIS 231
Query: 412 CSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAITIANVVPA 591
+ IF +++ ER++VSW ++I +Q+ EA L+ +ML+ + + P+A+T +++ +
Sbjct: 232 LACEIF-QKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQ-AGISPNAVTFVSLLNS 289
Query: 592 C 594
C
Sbjct: 290 C 290
Score = 110 bits (275), Expect = 3e-22
Identities = 73/234 (31%), Positives = 114/234 (48%), Gaps = 39/234 (16%)
Frame = +1
Query: 10 KVFSKFSVRNL----VAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGY 177
++ S S R L V N +I YC+ + A+E FD M K+D ISW++MI+GY
Sbjct: 301 RIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMS----KRDVISWSAMIAGY 356
Query: 178 AQNG-----NWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHS 342
AQ+G + E F L M + G + P++VTF+ ++ AC L+ G IH +
Sbjct: 357 AQSGYQDKESLDEVFQLLERMRREG-VFPNKVTFMSILKACSVHGALEQGRQIHAEISKV 415
Query: 343 GLLSDFRLGTSIVDMYSKCGKVECSRVIFEE----------------------------- 435
G SD L T+I +MY+KCG + + +F +
Sbjct: 416 GFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVF 475
Query: 436 -ELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAITIANVVPAC 594
E+ R++VSWN +I GY+Q+G D VF ++ +PD +TI +++ AC
Sbjct: 476 SEMSTRNVVSWNLMIAGYAQSG-DIAKVFELLSSMKVEGFQPDRVTIISILEAC 528
Score = 106 bits (264), Expect = 6e-21
Identities = 56/184 (30%), Positives = 106/184 (57%), Gaps = 4/184 (2%)
Frame = +1
Query: 58 MIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLYLSMNKVG 237
+I Y + GE++ A E+F +M+ +++ +SW ++I AQ+ +EAF+LY M + G
Sbjct: 220 LITMYSKCGEISLACEIFQKMK----ERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAG 275
Query: 238 NLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFRLGTSIVDMYSKCGKVECS 417
+ P+ VTF+ L+ +C L+ G IH + GL +D + +++ MY KC ++ +
Sbjct: 276 -ISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDA 334
Query: 418 RVIFEEELLERSLVSWNSLIMGYSQNGY----DYEAVFLFRRMLRDSNVKPDAITIANVV 585
R F + + +R ++SW+++I GY+Q+GY + VF +R V P+ +T +++
Sbjct: 335 RETF-DRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSIL 393
Query: 586 PACA 597
AC+
Sbjct: 394 KACS 397
>gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 148 bits (374), Expect = 1e-33
Identities = 74/198 (37%), Positives = 127/198 (64%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A KVF + S R++V++ +I GY NG + A+++FDE+ + KD +SWN++ISGYA+
Sbjct: 157 ARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPV----KDVVSWNALISGYAE 212
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
GN+ EA +L+ M K N+ P T + ++ AC Q+ ++++G +H + G S+ +
Sbjct: 213 TGNYKEALELFKEMMKT-NVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLK 271
Query: 364 LGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRD 543
+ +++D+Y KCG+VE + +F E L + ++SWN+LI GY+ EA+ LF+ MLR
Sbjct: 272 IVNALIDLYIKCGEVETASGLF-EGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR- 329
Query: 544 SNVKPDAITIANVVPACA 597
S P+ +T+ +++PACA
Sbjct: 330 SGESPNEVTMLSILPACA 347
Score = 114 bits (284), Expect = 3e-23
Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 2/189 (1%)
Frame = +1
Query: 37 NLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLY 216
NL N +I Y + GEV A LF+ + KD ISWN++I GY + EA L+
Sbjct: 269 NLKIVNALIDLYIKCGEVETASGLFEGLSY----KDVISWNTLIGGYTHMNLYKEALLLF 324
Query: 217 LSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVH--SGLLSDFRLGTSIVDMY 390
M + G P+ VT L ++ AC +D+G IH + G+ + L TS++DMY
Sbjct: 325 QEMLRSGES-PNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMY 383
Query: 391 SKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAIT 570
+KCG +E ++ +F+ +L RSL SWN++I G++ +G A +F RM +D ++PD IT
Sbjct: 384 AKCGDIEAAQQVFDS-MLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKD-GIEPDDIT 441
Query: 571 IANVVPACA 597
++ AC+
Sbjct: 442 FVGLLSACS 450
Score = 94.4 bits (233), Expect = 2e-17
Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 30/200 (15%)
Frame = +1
Query: 88 VTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLYLSMNKVGNLVPSRVTFL 267
+T A +FD ++ + + + WN+M G+A + + A LY+ M +G LVP+ TF
Sbjct: 53 LTYAISVFDSIQ----EPNLLIWNTMFRGHALSSDPVSALYLYVCMISLG-LVPNSYTFP 107
Query: 268 GLILACGQARNLDMGMSIHGRLVHSGLLSDFRLGTSIVDMYSKCGKVECSRVIFE----- 432
L+ AC +++ G IHG ++ G D + TS++ MY K G+ E +R +F+
Sbjct: 108 FLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHR 167
Query: 433 -------------------------EELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRML 537
+E+ + +VSWN+LI GY++ G EA+ LF+ M+
Sbjct: 168 DVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMM 227
Query: 538 RDSNVKPDAITIANVVPACA 597
+ +NVKPD T+ V+ ACA
Sbjct: 228 K-TNVKPDESTMVTVLSACA 246
>ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Capsella rubella]
gi|482575565|gb|EOA39752.1| hypothetical protein
CARUB_v10008399mg [Capsella rubella]
Length = 740
Score = 148 bits (373), Expect = 1e-33
Identities = 73/198 (36%), Positives = 128/198 (64%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A KVF + S R++V++ +I GY NG + A+++FDE+ + KD +SWN++ISGYA+
Sbjct: 187 ARKVFDQSSHRDVVSYTALIKGYASNGYIESAQKMFDEIPV----KDVVSWNALISGYAE 242
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
GN+ EA +L+ M + N+ P T + ++ ACGQ+ ++++G +H + G S+ +
Sbjct: 243 TGNYKEALELFKEMMQT-NVKPDESTMVTVLSACGQSASIELGRQVHSWIDDHGFGSNLK 301
Query: 364 LGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRD 543
+ +++D+Y KCG+VE + +F E L + ++SWN+LI GY+ EA+ LF+ MLR
Sbjct: 302 IVNALIDLYIKCGEVETASGLF-EGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRL 360
Query: 544 SNVKPDAITIANVVPACA 597
+ P+ +T+ +++PACA
Sbjct: 361 GEI-PNEVTMLSILPACA 377
Score = 114 bits (285), Expect = 2e-23
Identities = 67/189 (35%), Positives = 108/189 (57%), Gaps = 2/189 (1%)
Frame = +1
Query: 37 NLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLY 216
NL N +I Y + GEV A LF+ + KD ISWN++I GY + EA L+
Sbjct: 299 NLKIVNALIDLYIKCGEVETASGLFEGLSY----KDVISWNTLIGGYTHMNLYKEALLLF 354
Query: 217 LSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVH--SGLLSDFRLGTSIVDMY 390
M ++G +P+ VT L ++ AC +D+G IH + G+ + L TS++DMY
Sbjct: 355 QEMLRLGE-IPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMY 413
Query: 391 SKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAIT 570
+KCG +E ++ +F + +L RSL SWN++I G++ +G A +F RM + + ++PD IT
Sbjct: 414 AKCGDIEAAQQVF-DSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMGK-NGIEPDDIT 471
Query: 571 IANVVPACA 597
++ AC+
Sbjct: 472 FVGLLSACS 480
Score = 91.7 bits (226), Expect = 1e-16
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 30/199 (15%)
Frame = +1
Query: 88 VTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLYLSMNKVGNLVPSRVTFL 267
+T A +F+ ++ + + + WN+M G+A + + A LY+ M +G LVP+ TF
Sbjct: 83 LTYAISVFESIQ----EPNLLIWNTMFRGHALSSDPVSALYLYVCMISLG-LVPNSYTFP 137
Query: 268 GLILACGQARNLDMGMSIHGRLVHSGLLSDFRLGTSIVDMYSKCGKVECSRVIFE----- 432
L+ +C ++R G IHG ++ G D + TS++ MY K G++E +R +F+
Sbjct: 138 FLLKSCAKSRAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRLEDARKVFDQSSHR 197
Query: 433 -------------------------EELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRML 537
+E+ + +VSWN+LI GY++ G EA+ LF+ M+
Sbjct: 198 DVVSYTALIKGYASNGYIESAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMM 257
Query: 538 RDSNVKPDAITIANVVPAC 594
+ +NVKPD T+ V+ AC
Sbjct: 258 Q-TNVKPDESTMVTVLSAC 275
Score = 63.5 bits (153), Expect = 4e-08
Identities = 33/89 (37%), Positives = 54/89 (60%)
Frame = +1
Query: 55 TMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLYLSMNKV 234
++I Y + G++ A+++FD M L + SWN+MI G+A +G + AFD++ M K
Sbjct: 408 SLIDMYAKCGDIEAAQQVFDSM----LNRSLSSWNAMIFGFAMHGRANAAFDIFSRMGKN 463
Query: 235 GNLVPSRVTFLGLILACGQARNLDMGMSI 321
G + P +TF+GL+ AC + LD+G I
Sbjct: 464 G-IEPDDITFVGLLSACSHSGMLDLGRHI 491
>ref|XP_007036762.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
[Theobroma cacao] gi|590665507|ref|XP_007036763.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao]
gi|590665511|ref|XP_007036764.1| Tetratricopeptide
repeat (TPR)-like superfamily protein isoform 1
[Theobroma cacao] gi|508774007|gb|EOY21263.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao] gi|508774008|gb|EOY21264.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao] gi|508774009|gb|EOY21265.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 1 [Theobroma cacao]
Length = 768
Score = 147 bits (372), Expect = 2e-33
Identities = 78/198 (39%), Positives = 125/198 (63%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A K+F K RN+ + NT+I GY ++GE+ A+ELFD M ++D +SW +MI+GYAQ
Sbjct: 318 ARKLFDKMPCRNVTSLNTIITGYAQSGEIAHARELFDRMP----RRDPVSWAAMIAGYAQ 373
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
+G EA L++ M + G + +R +F + C L+MG +HGRLV +G S
Sbjct: 374 SGYDEEALCLFVEMKRDGERL-NRSSFACALSTCAHIAALEMGKQLHGRLVKAGYESGSF 432
Query: 364 LGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRD 543
+G +++ MY KCG +E + F EE++E+ +VSWN++I GY+++G+ EA+ +F M +
Sbjct: 433 VGNALLLMYCKCGGIEEACSAF-EEIMEKDVVSWNTMIAGYARHGFGKEALKVFESM-KA 490
Query: 544 SNVKPDAITIANVVPACA 597
+ VKPD T+ V+ AC+
Sbjct: 491 AGVKPDDTTMVGVLSACS 508
Score = 98.2 bits (243), Expect = 2e-18
Identities = 57/180 (31%), Positives = 102/180 (56%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A ++F + R+ +++NT+I GY +NGE+ +A+ LF E + +D +W +M+SGY Q
Sbjct: 225 ARRIFDRIPFRDKISWNTIITGYAQNGEIEEARRLFHESPV----RDVFTWTAMVSGYVQ 280
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
NG +A + + M + + V++ +I Q + +DM + ++ + S
Sbjct: 281 NGMVDKAREFFEEMPE-----KNAVSWNAMIAGYVQCKRMDMARKLFDKMPCRNVTS--- 332
Query: 364 LGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRD 543
L T I+ Y++ G++ +R +F + + R VSW ++I GY+Q+GYD EA+ LF M RD
Sbjct: 333 LNT-IITGYAQSGEIAHARELF-DRMPRRDPVSWAAMIAGYAQSGYDEEALCLFVEMKRD 390
Score = 82.8 bits (203), Expect = 7e-14
Identities = 55/188 (29%), Positives = 96/188 (51%), Gaps = 24/188 (12%)
Frame = +1
Query: 1 SAMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYA 180
+A ++F + R++V++N M+ GY +NG V KA+++FD M K++ISWN++++ Y
Sbjct: 131 AAKELFEQMPERDVVSWNAMLSGYAQNGCVDKARKIFDRMP----TKNSISWNALLATYV 186
Query: 181 QNGNWSEAFDL------------------------YLSMNKVGNLVPSRVTFLGLILACG 288
QNG EA L ++ ++ + +P R + G
Sbjct: 187 QNGRMEEACTLFESKADWDLVSWNCLMGGFVKTKRFIDARRIFDRIPFRDKISWNTIITG 246
Query: 289 QARNLDMGMSIHGRLVHSGLLSDFRLGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWN 468
A+N ++ + RL H + D T++V Y + G V+ +R F EE+ E++ VSWN
Sbjct: 247 YAQNGEIEEA--RRLFHESPVRDVFTWTAMVSGYVQNGMVDKAREFF-EEMPEKNAVSWN 303
Query: 469 SLIMGYSQ 492
++I GY Q
Sbjct: 304 AMIAGYVQ 311
Score = 73.2 bits (178), Expect = 5e-11
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 32/217 (14%)
Frame = +1
Query: 1 SAMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYA 180
SA++VF+ R+ V++N MI GY N + A+ LFDEM ++D +SWN MISG
Sbjct: 69 SALRVFNSMPRRSSVSYNAMISGYLMNDKFELARNLFDEMP----ERDLVSWNVMISGCV 124
Query: 181 QNGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARN--LDMGMSIHGRLVHSGLLS 354
+N N + A +L+ M P R + G A+N +D I R+ +S
Sbjct: 125 RNNNVAAAKELFEQM-------PERDVVSWNAMLSGYAQNGCVDKARKIFDRMPTKNSIS 177
Query: 355 DFRLGTSIVDMYSKCGKVECSRVIFE------------------------------EELL 444
+++ Y + G++E + +FE + +
Sbjct: 178 ----WNALLATYVQNGRMEEACTLFESKADWDLVSWNCLMGGFVKTKRFIDARRIFDRIP 233
Query: 445 ERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVK 555
R +SWN++I GY+QNG EA RR+ +S V+
Sbjct: 234 FRDKISWNTIITGYAQNGEIEEA----RRLFHESPVR 266
>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 147 bits (372), Expect = 2e-33
Identities = 79/199 (39%), Positives = 126/199 (63%)
Frame = +1
Query: 1 SAMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYA 180
+A VF + + R+ ++F +I GY G + +A++LFDEM + KD +SWN+MI+GYA
Sbjct: 182 NAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPV----KDVVSWNAMIAGYA 237
Query: 181 QNGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDF 360
Q G EA L+ M K N+ P+ T + ++ AC Q+ LD+G S+ + GL S+
Sbjct: 238 QMGRSKEALLLFEDMRKA-NVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNL 296
Query: 361 RLGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLR 540
+L +++DMYSKCG ++ +R +F +++LER ++SWN +I GY+ EA+ LFR ML
Sbjct: 297 KLVNALIDMYSKCGDLQTARELF-DDMLERDVISWNVMIGGYTHMCSYKEALALFREMLA 355
Query: 541 DSNVKPDAITIANVVPACA 597
S V+P IT +++P+CA
Sbjct: 356 -SGVEPTEITFLSILPSCA 373
Score = 114 bits (284), Expect = 3e-23
Identities = 64/186 (34%), Positives = 106/186 (56%)
Frame = +1
Query: 37 NLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLY 216
NL N +I Y + G++ A+ELFD+M L++D ISWN MI GY ++ EA L+
Sbjct: 295 NLKLVNALIDMYSKCGDLQTARELFDDM----LERDVISWNVMIGGYTHMCSYKEALALF 350
Query: 217 LSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFRLGTSIVDMYSK 396
M G + P+ +TFL ++ +C +D+G IH + + L TS++D+Y+K
Sbjct: 351 REMLASG-VEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAK 409
Query: 397 CGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAITIA 576
CG + +R +F+ + +SL SWN++I G + +G +A LF +M D ++P+ IT
Sbjct: 410 CGNIVAARQVFDGMKI-KSLASWNAMICGLAMHGQADKAFELFSKMSSD-GIEPNEITFV 467
Query: 577 NVVPAC 594
++ AC
Sbjct: 468 GILSAC 473
Score = 86.7 bits (213), Expect = 5e-15
Identities = 59/221 (26%), Positives = 112/221 (50%), Gaps = 30/221 (13%)
Frame = +1
Query: 25 FSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEA 204
F++ L+ F+ + +G+++ A LF+ +E + + WNSMI G + + + + A
Sbjct: 62 FALSKLIEFSAV----SRSGDISYAISLFNSIE----EPNLFIWNSMIRGLSMSLSPALA 113
Query: 205 FDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFRLGTSIVD 384
++ M G + P+ TF L+ +C + + G IH ++ G +SD + TS+++
Sbjct: 114 LVFFVRMIYSG-VEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLIN 172
Query: 385 MYSKCGKVECSRVIFE------------------------------EELLERSLVSWNSL 474
MY++ G++ ++++F+ +E+ + +VSWN++
Sbjct: 173 MYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAM 232
Query: 475 IMGYSQNGYDYEAVFLFRRMLRDSNVKPDAITIANVVPACA 597
I GY+Q G EA+ LF M R +NV P+ TI +V+ ACA
Sbjct: 233 IAGYAQMGRSKEALLLFEDM-RKANVPPNESTIVSVLSACA 272
Score = 65.5 bits (158), Expect = 1e-08
Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 6/149 (4%)
Frame = +1
Query: 70 YCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLYLSMNKVGNLVP 249
Y + G + A+++FD M++ K SWN+MI G A +G +AF+L+ M+ G + P
Sbjct: 407 YAKCGNIVAARQVFDGMKI----KSLASWNAMICGLAMHGQADKAFELFSKMSSDG-IEP 461
Query: 250 SRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFRLGTS------IVDMYSKCGKVE 411
+ +TF+G++ AC A +D+G S ++ D+++ ++D+ + G E
Sbjct: 462 NEITFVGILSACKHAGLVDLGQQF-----FSSMVQDYKISPKSQHYGCMIDLLGRAGLFE 516
Query: 412 CSRVIFEEELLERSLVSWNSLIMGYSQNG 498
+ + + ++ W SL+ +G
Sbjct: 517 EAESLLQNMEVKPDGAIWGSLLGACRDHG 545
>ref|XP_001764438.1| predicted protein [Physcomitrella patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella
patens] gi|162684302|gb|EDQ70705.1| predicted protein
[Physcomitrella patens]
Length = 868
Score = 147 bits (371), Expect = 2e-33
Identities = 79/198 (39%), Positives = 126/198 (63%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A +VFSK + +N+VA+ + + Y + G+++ A+++F EM ++ +SWN MI+GYAQ
Sbjct: 418 AEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPT----RNVVSWNLMIAGYAQ 473
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
NG+ + F+L SM G P RVT + ++ ACG L+ G +H V GL SD
Sbjct: 474 NGDIVKVFELLSSMKAEG-FQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTV 532
Query: 364 LGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRD 543
+ TS++ MYSKCG+V +R +F +++ R V+WN+++ GY Q+G EAV LF+RML++
Sbjct: 533 VATSLIGMYSKCGQVAEARTVF-DKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKE 591
Query: 544 SNVKPDAITIANVVPACA 597
V P+ IT+ V+ AC+
Sbjct: 592 -RVSPNEITLTAVISACS 608
Score = 112 bits (280), Expect = 8e-23
Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 35/221 (15%)
Frame = +1
Query: 37 NLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNG-----NWSE 201
+++ N +I YC+ V +A+E+FD M K+D ISW++MI+GYAQ+G + E
Sbjct: 292 DMIVANALITMYCKCNSVQEAREIFDRMS----KRDVISWSAMIAGYAQSGYKDKESIDE 347
Query: 202 AFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFRLGTSIV 381
F L M + G + P++VTF+ ++ AC L+ G IH L G D L T+I
Sbjct: 348 VFQLLERMRREG-VFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIF 406
Query: 382 DMYSKCGKVECSRVIFEE------------------------------ELLERSLVSWNS 471
+MY+KCG + + +F + E+ R++VSWN
Sbjct: 407 NMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNL 466
Query: 472 LIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAITIANVVPAC 594
+I GY+QNG D VF ++ +PD +T+ ++ AC
Sbjct: 467 MIAGYAQNG-DIVKVFELLSSMKAEGFQPDRVTVITILEAC 506
Score = 108 bits (271), Expect = 9e-22
Identities = 58/181 (32%), Positives = 110/181 (60%)
Frame = +1
Query: 52 NTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLYLSMNK 231
N++I Y + +V A+++F M L +D ++W+SMI+ YA N + ++AFD + M
Sbjct: 95 NSLINFYSKFEDVASAEQVFRRMTL----RDVVTWSSMIAAYAGNNHPAKAFDTFERMTD 150
Query: 232 VGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFRLGTSIVDMYSKCGKVE 411
N+ P+R+TFL ++ AC L+ G IH + G+ +D + T+++ MYSKCG++
Sbjct: 151 A-NIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEIS 209
Query: 412 CSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAITIANVVPA 591
+ +F ++ ER++VSW ++I +Q+ EA L+ +ML+ + + P+A+T +++ +
Sbjct: 210 VACEVF-HKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQ-AGISPNAVTFVSLLNS 267
Query: 592 C 594
C
Sbjct: 268 C 268
Score = 107 bits (267), Expect = 3e-21
Identities = 58/183 (31%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Frame = +1
Query: 58 MIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLYLSMNKVG 237
+I Y + GE++ A E+F +M +++ +SW ++I AQ+ +EAF+LY M + G
Sbjct: 198 LITMYSKCGEISVACEVFHKMT----ERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAG 253
Query: 238 NLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFRLGTSIVDMYSKCGKVECS 417
+ P+ VTF+ L+ +C L+ G IH + GL +D + +++ MY KC V+ +
Sbjct: 254 -ISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEA 312
Query: 418 RVIFEEELLERSLVSWNSLIMGYSQNGY----DYEAVFLFRRMLRDSNVKPDAITIANVV 585
R IF + + +R ++SW+++I GY+Q+GY + VF +R V P+ +T +++
Sbjct: 313 REIF-DRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSIL 371
Query: 586 PAC 594
AC
Sbjct: 372 RAC 374
>gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
Length = 526
Score = 147 bits (371), Expect = 2e-33
Identities = 76/198 (38%), Positives = 127/198 (64%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A KVF + S R++V++ +I GY G + A++LFDE+ + KD +SWN+MISGYA+
Sbjct: 142 ARKVFDQSSHRDVVSYTALIKGYASRGYIENAQKLFDEIPV----KDVVSWNAMISGYAE 197
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
GN+ EA +L+ M K N+ P T + ++ AC Q+ ++++G +H + G S+ +
Sbjct: 198 TGNYKEALELFKDMMKT-NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLK 256
Query: 364 LGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRD 543
+ +++D+YSKCG+VE + +F E L + ++SWN+LI GY+ EA+ LF+ MLR
Sbjct: 257 IVNALIDLYSKCGEVETACGLF-EGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR- 314
Query: 544 SNVKPDAITIANVVPACA 597
S P+ +T+ +++PACA
Sbjct: 315 SGESPNDVTMLSILPACA 332
Score = 109 bits (273), Expect = 5e-22
Identities = 68/189 (35%), Positives = 105/189 (55%), Gaps = 2/189 (1%)
Frame = +1
Query: 37 NLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLY 216
NL N +I Y + GEV A LF+ + KD ISWN++I GY + EA L+
Sbjct: 254 NLKIVNALIDLYSKCGEVETACGLFEGLSY----KDVISWNTLIGGYTHMNLYKEALLLF 309
Query: 217 LSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVH--SGLLSDFRLGTSIVDMY 390
M + G P+ VT L ++ AC +D+G IH + G+ + L TS++DMY
Sbjct: 310 QEMLRSGES-PNDVTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMY 368
Query: 391 SKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAIT 570
+KCG +E ++ +F + +L RSL SWN++I G++ +G A LF +M R + + PD IT
Sbjct: 369 AKCGDIEAAKQVF-DSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKM-RKNGIDPDDIT 426
Query: 571 IANVVPACA 597
++ AC+
Sbjct: 427 FVGLLSACS 435
Score = 87.4 bits (215), Expect = 3e-15
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 30/178 (16%)
Frame = +1
Query: 154 WNSMISGYAQNGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRL 333
WN+M G+A + + A LY+ M +G L+P+ TF L+ +C +++ G IHG +
Sbjct: 56 WNTMFRGHALSSDPVSALYLYVCMISLG-LLPNCYTFPFLLKSCAKSKAFREGQQIHGHV 114
Query: 334 VHSGLLSDFRLGTSIVDMYSKCGKVECSRVIFE--------------------------- 432
+ G D + TS++ MY + G++E +R +F+
Sbjct: 115 LKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGYIENAQ 174
Query: 433 ---EELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAITIANVVPACA 597
+E+ + +VSWN++I GY++ G EA+ LF+ M++ +NV+PD T+ VV ACA
Sbjct: 175 KLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK-TNVRPDESTMVTVVSACA 231
Score = 71.2 bits (173), Expect = 2e-10
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Frame = +1
Query: 55 TMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLYLSMNKV 234
++I Y + G++ AK++FD M L + SWN+MI G+A +G + AFDL+ M K
Sbjct: 363 SLIDMYAKCGDIEAAKQVFDSM----LTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKN 418
Query: 235 GNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFRLGTSI------VDMYSK 396
G + P +TF+GL+ AC + LD+ GR + + D+++ + +D+
Sbjct: 419 G-IDPDDITFVGLLSACSHSGMLDL-----GRHIFRSMSQDYKITPKLEHYGCMIDLLGH 472
Query: 397 CGKVECSRVIFEEELLERSLVSWNSLI 477
CG + ++ + +E V W SL+
Sbjct: 473 CGLFKEAKEMIRTMPMEPDGVIWCSLL 499
>ref|XP_006364895.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Solanum tuberosum]
Length = 731
Score = 147 bits (370), Expect = 3e-33
Identities = 82/198 (41%), Positives = 123/198 (62%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A VF K S R+ V+F +I GY G V A+ELFDEM + +D +SWN+MISGYAQ
Sbjct: 179 ARLVFDKSSKRDAVSFTALINGYALKGRVGDARELFDEMPV----RDVVSWNAMISGYAQ 234
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
G + EA L+ M V N+ PS T L ++ AC + L +G + + GL + R
Sbjct: 235 VGRFEEALVLFEEMRNV-NVEPSVSTLLSVLSACARVGELKLGNWVRSWIEDHGLGLNIR 293
Query: 364 LGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRD 543
L +++DMY+KCG V+ +R++F E L E+ LVSWN +I GY+ GY +A+ +F RM ++
Sbjct: 294 LVNALIDMYAKCGDVKTARMLF-EGLEEKDLVSWNVMIGGYTHTGYYKDALSVFHRMQQE 352
Query: 544 SNVKPDAITIANVVPACA 597
+ P+ +T+ +++PACA
Sbjct: 353 V-IDPNDVTLLSILPACA 369
Score = 110 bits (275), Expect = 3e-22
Identities = 66/187 (35%), Positives = 109/187 (58%), Gaps = 1/187 (0%)
Frame = +1
Query: 37 NLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLY 216
N+ N +I Y + G+V A+ LF+ +E +KD +SWN MI GY G + +A ++
Sbjct: 291 NIRLVNALIDMYAKCGDVKTARMLFEGLE----EKDLVSWNVMIGGYTHTGYYKDALSVF 346
Query: 217 LSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRL-VHSGLLSDFRLGTSIVDMYS 393
M + + P+ VT L ++ AC LD+G IH + H L + L TS+++MY+
Sbjct: 347 HRMQQEV-IDPNDVTLLSILPACAHLGALDLGKWIHVYIDKHYQHLQNTSLWTSLINMYA 405
Query: 394 KCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAITI 573
KCG + ++ +F+ + ++L S+N +I G + +G YEA+ LFR+M +S +KPD IT
Sbjct: 406 KCGAIAAAKQVFQGMKM-KTLASYNVMISGLAMHGDAYEALELFRKMTEES-MKPDDITF 463
Query: 574 ANVVPAC 594
+V+ AC
Sbjct: 464 VSVLSAC 470
Score = 92.4 bits (228), Expect = 8e-17
Identities = 63/227 (27%), Positives = 114/227 (50%), Gaps = 33/227 (14%)
Frame = +1
Query: 16 FSKFSVRNLVAFNTMIVGYCEN---GEVTKAKELFDEMELVGLKKDTISWNSMISGYAQN 186
F KF + N + ++ +C G+ + A +F+ + + + + +N +I GY+ +
Sbjct: 48 FIKFGLHNTQFALSKLLEFCATKPYGDFSYALSIFNTTD----EPNHVMYNMIIRGYSLS 103
Query: 187 GNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFRL 366
+ S A D Y M GN P+ TF L+ +C + + MG IHG + GL++D +
Sbjct: 104 SSPSFAIDFYEKMLFSGNR-PNSYTFPFLLKSCAKIMDTQMGKMIHGHVFKLGLMTDVYV 162
Query: 367 GTSIVDMYSKCGKVECSRVIFE------------------------------EELLERSL 456
S+++MY++ G+++ +R++F+ +E+ R +
Sbjct: 163 HASLINMYAQNGEMDDARLVFDKSSKRDAVSFTALINGYALKGRVGDARELFDEMPVRDV 222
Query: 457 VSWNSLIMGYSQNGYDYEAVFLFRRMLRDSNVKPDAITIANVVPACA 597
VSWN++I GY+Q G EA+ LF M R+ NV+P T+ +V+ ACA
Sbjct: 223 VSWNAMISGYAQVGRFEEALVLFEEM-RNVNVEPSVSTLLSVLSACA 268
Score = 57.8 bits (138), Expect = 2e-06
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 1/150 (0%)
Frame = +1
Query: 31 VRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFD 210
++N + ++I Y + G + AK++F M++ K S+N MISG A +G+ EA +
Sbjct: 391 LQNTSLWTSLINMYAKCGAIAAAKQVFQGMKM----KTLASYNVMISGLAMHGDAYEALE 446
Query: 211 LYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHS-GLLSDFRLGTSIVDM 387
L+ M + ++ P +TF+ ++ AC A +D+G ++ S + ++D+
Sbjct: 447 LFRKMTEE-SMKPDDITFVSVLSACNHAGLVDLGREYFNTMIQSYKYTPKLQHYGCMIDL 505
Query: 388 YSKCGKVECSRVIFEEELLERSLVSWNSLI 477
+ GK + + + E ++ W SL+
Sbjct: 506 LGRAGKFDEAMTMIESMEIKPDGAIWGSLL 535
>ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 147 bits (370), Expect = 3e-33
Identities = 74/198 (37%), Positives = 124/198 (62%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A ++F + RN ++NTM+ GY + G + +AK LFDEM ++D ISW +MISGYAQ
Sbjct: 327 ARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMP----QRDCISWAAMISGYAQ 382
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
+G EA L++ M + G ++ +R + +C + L++G +HGRLV +G + +
Sbjct: 383 SGQSEEALHLFIKMKRDGGIL-NRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYI 441
Query: 364 LGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRD 543
G +++ MY KCG +E + +F E++ E+ +VSWN++I GY+++G+ EA+ LF M
Sbjct: 442 AGNALLAMYGKCGSIEEAFDVF-EDITEKDIVSWNTMIAGYARHGFGKEALALFESM--K 498
Query: 544 SNVKPDAITIANVVPACA 597
+KPD +T+ V+ AC+
Sbjct: 499 MTIKPDDVTLVGVLSACS 516
Score = 91.7 bits (226), Expect = 1e-16
Identities = 63/187 (33%), Positives = 104/187 (55%), Gaps = 7/187 (3%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A KVF K R+L+++N M+ GY +NG ++ A+ LF++M +KD +SWN+M+SG+AQ
Sbjct: 110 ARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMP----EKDVVSWNAMLSGFAQ 165
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
NG EA ++ M LV + +++ GL+ A Q +GR+ + L D +
Sbjct: 166 NGFVEEARKIFDQM-----LVKNEISWNGLLSAYVQ----------NGRIEDARRLFDSK 210
Query: 364 LGTSIVDM------YSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLF 525
+ IV Y + +++ +R +F + + R +SWN +I GY+QNG EA LF
Sbjct: 211 MDWEIVSWNCLMGGYVRKKRLDDARSLF-DRMPVRDKISWNIMITGYAQNGLLSEARRLF 269
Query: 526 RRM-LRD 543
+ +RD
Sbjct: 270 EELPIRD 276
Score = 73.9 bits (180), Expect = 3e-11
Identities = 54/189 (28%), Positives = 102/189 (53%)
Frame = +1
Query: 1 SAMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYA 180
+A +F++ +++V++N M+ G+ +NG V +A+++FD+M L K+ ISWN ++S Y
Sbjct: 140 AARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYV 195
Query: 181 QNGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDF 360
QNG +A L+ S K+ + S +G + + + LD S+ R+ +S
Sbjct: 196 QNGRIEDARRLFDS--KMDWEIVSWNCLMGGYV---RKKRLDDARSLFDRMPVRDKIS-- 248
Query: 361 RLGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLR 540
++ Y++ G + +R +F EEL R + +W +++ G+ QNG EA +F M
Sbjct: 249 --WNIMITGYAQNGLLSEARRLF-EELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPE 305
Query: 541 DSNVKPDAI 567
+ V +A+
Sbjct: 306 KNEVSWNAM 314
Score = 57.4 bits (137), Expect = 3e-06
Identities = 37/147 (25%), Positives = 69/147 (46%)
Frame = +1
Query: 142 DTISWNSMISGYAQNGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSI 321
D + WN IS Y + G A ++ M + S VT+ +I D +
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMRR-----RSTVTYNAMISGYLSNNKFDCARKV 113
Query: 322 HGRLVHSGLLSDFRLGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGY 501
++ L+S ++ Y K G + +R +F + + E+ +VSWN+++ G++QNG+
Sbjct: 114 FEKMPDRDLIS----WNVMLSGYVKNGNLSAARALFNQ-MPEKDVVSWNAMLSGFAQNGF 168
Query: 502 DYEAVFLFRRMLRDSNVKPDAITIANV 582
EA +F +ML + + + + A V
Sbjct: 169 VEEARKIFDQMLVKNEISWNGLLSAYV 195
Score = 56.6 bits (135), Expect = 5e-06
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 2/165 (1%)
Frame = +1
Query: 37 NLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLY 216
++V +N I Y G+ A +F+ M ++ T+++N+MISGY N + A
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMR----RRSTVTYNAMISGYLSNNKFDCA---- 110
Query: 217 LSMNKVGNLVPSRVTFLGLILACGQAR--NLDMGMSIHGRLVHSGLLSDFRLGTSIVDMY 390
KV +P R ++ G + NL ++ ++ ++S +++ +
Sbjct: 111 ---RKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVS----WNAMLSGF 163
Query: 391 SKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLF 525
++ G VE +R IF +++L ++ +SWN L+ Y QNG +A LF
Sbjct: 164 AQNGFVEEARKIF-DQMLVKNEISWNGLLSAYVQNGRIEDARRLF 207
>ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 147 bits (370), Expect = 3e-33
Identities = 74/198 (37%), Positives = 124/198 (62%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A ++F + RN ++NTM+ GY + G + +AK LFDEM ++D ISW +MISGYAQ
Sbjct: 327 ARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMP----QRDCISWAAMISGYAQ 382
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
+G EA L++ M + G ++ +R + +C + L++G +HGRLV +G + +
Sbjct: 383 SGQSEEALHLFIKMKRDGGIL-NRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYI 441
Query: 364 LGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRD 543
G +++ MY KCG +E + +F E++ E+ +VSWN++I GY+++G+ EA+ LF M
Sbjct: 442 AGNALLAMYGKCGSIEEAFDVF-EDITEKDIVSWNTMIAGYARHGFGKEALALFESM--K 498
Query: 544 SNVKPDAITIANVVPACA 597
+KPD +T+ V+ AC+
Sbjct: 499 MTIKPDDVTLVGVLSACS 516
Score = 91.7 bits (226), Expect = 1e-16
Identities = 63/187 (33%), Positives = 104/187 (55%), Gaps = 7/187 (3%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A KVF K R+L+++N M+ GY +NG ++ A+ LF++M +KD +SWN+M+SG+AQ
Sbjct: 110 ARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMP----EKDVVSWNAMLSGFAQ 165
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
NG EA ++ M LV + +++ GL+ A Q +GR+ + L D +
Sbjct: 166 NGFVEEARKIFDQM-----LVKNEISWNGLLSAYVQ----------NGRIEDARRLFDSK 210
Query: 364 LGTSIVDM------YSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLF 525
+ IV Y + +++ +R +F + + R +SWN +I GY+QNG EA LF
Sbjct: 211 MDWEIVSWNCLMGGYVRKKRLDDARSLF-DRMPVRDKISWNIMITGYAQNGLLSEARRLF 269
Query: 526 RRM-LRD 543
+ +RD
Sbjct: 270 EELPIRD 276
Score = 73.9 bits (180), Expect = 3e-11
Identities = 54/189 (28%), Positives = 102/189 (53%)
Frame = +1
Query: 1 SAMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYA 180
+A +F++ +++V++N M+ G+ +NG V +A+++FD+M L K+ ISWN ++S Y
Sbjct: 140 AARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYV 195
Query: 181 QNGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDF 360
QNG +A L+ S K+ + S +G + + + LD S+ R+ +S
Sbjct: 196 QNGRIEDARRLFDS--KMDWEIVSWNCLMGGYV---RKKRLDDARSLFDRMPVRDKIS-- 248
Query: 361 RLGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLR 540
++ Y++ G + +R +F EEL R + +W +++ G+ QNG EA +F M
Sbjct: 249 --WNIMITGYAQNGLLSEARRLF-EELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPE 305
Query: 541 DSNVKPDAI 567
+ V +A+
Sbjct: 306 KNEVSWNAM 314
Score = 57.4 bits (137), Expect = 3e-06
Identities = 37/147 (25%), Positives = 69/147 (46%)
Frame = +1
Query: 142 DTISWNSMISGYAQNGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSI 321
D + WN IS Y + G A ++ M + S VT+ +I D +
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMRR-----RSTVTYNAMISGYLSNNKFDCARKV 113
Query: 322 HGRLVHSGLLSDFRLGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGY 501
++ L+S ++ Y K G + +R +F + + E+ +VSWN+++ G++QNG+
Sbjct: 114 FEKMPDRDLIS----WNVMLSGYVKNGNLSAARALFNQ-MPEKDVVSWNAMLSGFAQNGF 168
Query: 502 DYEAVFLFRRMLRDSNVKPDAITIANV 582
EA +F +ML + + + + A V
Sbjct: 169 VEEARKIFDQMLVKNEISWNGLLSAYV 195
Score = 56.6 bits (135), Expect = 5e-06
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 2/165 (1%)
Frame = +1
Query: 37 NLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLY 216
++V +N I Y G+ A +F+ M ++ T+++N+MISGY N + A
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMR----RRSTVTYNAMISGYLSNNKFDCA---- 110
Query: 217 LSMNKVGNLVPSRVTFLGLILACGQAR--NLDMGMSIHGRLVHSGLLSDFRLGTSIVDMY 390
KV +P R ++ G + NL ++ ++ ++S +++ +
Sbjct: 111 ---RKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVS----WNAMLSGF 163
Query: 391 SKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLF 525
++ G VE +R IF +++L ++ +SWN L+ Y QNG +A LF
Sbjct: 164 AQNGFVEEARKIF-DQMLVKNEISWNGLLSAYVQNGRIEDARRLF 207
>emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 147 bits (370), Expect = 3e-33
Identities = 71/198 (35%), Positives = 127/198 (64%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A ++F +N+ ++NTMI GY +NG++ +A+ FD M ++D+ISW ++I+GYAQ
Sbjct: 235 ARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMP----QRDSISWAAIIAGYAQ 290
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
+G EA L++ M + G + +R TF + C + L++G +HGR+V +GL S
Sbjct: 291 SGYGEEALHLFVEMKRDGERL-NRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCY 349
Query: 364 LGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRD 543
+G +++ MY KCG ++ + ++F E + E+ +VSWN++I GY+++G+ EA+ LF M +
Sbjct: 350 VGNALLVMYCKCGNIDDAYIVF-EGIEEKEVVSWNTMIAGYARHGFGKEALMLFESM-KK 407
Query: 544 SNVKPDAITIANVVPACA 597
+ + PD +T+ V+ AC+
Sbjct: 408 TGILPDDVTMVGVLSACS 425
Score = 90.5 bits (223), Expect = 3e-16
Identities = 57/198 (28%), Positives = 104/198 (52%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A +F + R+ V++NTMI GY +NGE+ +A+ LF+E + +D +W +M+SGY Q
Sbjct: 142 ARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPV----RDVFTWTAMVSGYVQ 197
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
NG EA ++ M + + V++ +I Q + +D + + + S
Sbjct: 198 NGMLDEARRVFDGMPE-----KNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSS--- 249
Query: 364 LGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRD 543
+++ Y++ G + +R F + + +R +SW ++I GY+Q+GY EA+ LF M RD
Sbjct: 250 -WNTMITGYAQNGDIAQARNFF-DRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRD 307
Query: 544 SNVKPDAITIANVVPACA 597
+ + T + + CA
Sbjct: 308 GE-RLNRSTFTSTLSTCA 324
Score = 75.5 bits (184), Expect = 1e-11
Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 24/202 (11%)
Frame = +1
Query: 1 SAMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYA 180
+A +F + R++V++N M+ GY +NG V +AKE+FDEM K++ISWN M++ Y
Sbjct: 48 AARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPC----KNSISWNGMLAAYV 103
Query: 181 QNG------------------NWSEAFDLYLSMNK------VGNLVPSRVTFLGLILACG 288
QNG +W+ Y+ N+ + + +P R + G
Sbjct: 104 QNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISG 163
Query: 289 QARNLDMGMSIHGRLVHSGLLSDFRLGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWN 468
A+N ++ + RL + D T++V Y + G ++ +R +F + + E++ VSWN
Sbjct: 164 YAQNGELLEA--QRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVF-DGMPEKNSVSWN 220
Query: 469 SLIMGYSQNGYDYEAVFLFRRM 534
++I GY Q +A LF M
Sbjct: 221 AIIAGYVQCKRMDQARELFEAM 242
>ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 147 bits (370), Expect = 3e-33
Identities = 71/198 (35%), Positives = 127/198 (64%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A ++F +N+ ++NTMI GY +NG++ +A+ FD M ++D+ISW ++I+GYAQ
Sbjct: 316 ARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMP----QRDSISWAAIIAGYAQ 371
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
+G EA L++ M + G + +R TF + C + L++G +HGR+V +GL S
Sbjct: 372 SGYGEEALHLFVEMKRDGERL-NRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCY 430
Query: 364 LGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRD 543
+G +++ MY KCG ++ + ++F E + E+ +VSWN++I GY+++G+ EA+ LF M +
Sbjct: 431 VGNALLVMYCKCGNIDDAYIVF-EGIEEKEVVSWNTMIAGYARHGFGKEALMLFESM-KK 488
Query: 544 SNVKPDAITIANVVPACA 597
+ + PD +T+ V+ AC+
Sbjct: 489 TGILPDDVTMVGVLSACS 506
Score = 90.5 bits (223), Expect = 3e-16
Identities = 57/198 (28%), Positives = 104/198 (52%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A +F + R+ V++NTMI GY +NGE+ +A+ LF+E + +D +W +M+SGY Q
Sbjct: 223 ARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPV----RDVFTWTAMVSGYVQ 278
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
NG EA ++ M + + V++ +I Q + +D + + + S
Sbjct: 279 NGMLDEARRVFDGMPE-----KNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSS--- 330
Query: 364 LGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLFRRMLRD 543
+++ Y++ G + +R F + + +R +SW ++I GY+Q+GY EA+ LF M RD
Sbjct: 331 -WNTMITGYAQNGDIAQARNFF-DRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRD 388
Query: 544 SNVKPDAITIANVVPACA 597
+ + T + + CA
Sbjct: 389 GE-RLNRSTFTSTLSTCA 405
Score = 79.0 bits (193), Expect = 1e-12
Identities = 57/174 (32%), Positives = 92/174 (52%)
Frame = +1
Query: 4 AMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQ 183
A ++F K R+LV++N MI G + A+ LFD+M ++D +SWN+M+SGYAQ
Sbjct: 99 ARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMP----ERDVVSWNAMLSGYAQ 154
Query: 184 NGNWSEAFDLYLSMNKVGNLVPSRVTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFR 363
NG EA +++ M + +++ G++ A Q ++ RL S +
Sbjct: 155 NGYVKEAKEIFDEMP-----CKNSISWNGMLAAYVQNGRIEDAR----RLFESKADWELI 205
Query: 364 LGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLF 525
++ Y K ++ +R IF + + ER VSWN++I GY+QNG EA LF
Sbjct: 206 SWNCMMGGYVKRNRLVDARGIF-DRMPERDEVSWNTMISGYAQNGELLEAQRLF 258
Score = 75.5 bits (184), Expect = 1e-11
Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 24/202 (11%)
Frame = +1
Query: 1 SAMKVFSKFSVRNLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYA 180
+A +F + R++V++N M+ GY +NG V +AKE+FDEM K++ISWN M++ Y
Sbjct: 129 AARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPC----KNSISWNGMLAAYV 184
Query: 181 QNG------------------NWSEAFDLYLSMNK------VGNLVPSRVTFLGLILACG 288
QNG +W+ Y+ N+ + + +P R + G
Sbjct: 185 QNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISG 244
Query: 289 QARNLDMGMSIHGRLVHSGLLSDFRLGTSIVDMYSKCGKVECSRVIFEEELLERSLVSWN 468
A+N ++ + RL + D T++V Y + G ++ +R +F + + E++ VSWN
Sbjct: 245 YAQNGELLEA--QRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVF-DGMPEKNSVSWN 301
Query: 469 SLIMGYSQNGYDYEAVFLFRRM 534
++I GY Q +A LF M
Sbjct: 302 AIIAGYVQCKRMDQARELFEAM 323
Score = 60.1 bits (144), Expect = 5e-07
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 2/165 (1%)
Frame = +1
Query: 37 NLVAFNTMIVGYCENGEVTKAKELFDEMELVGLKKDTISWNSMISGYAQNGNWSEAFDLY 216
++V +N I + NG+ A LF+ M ++ +ISWN+MISG N + A L+
Sbjct: 48 DIVKWNIAITNHMRNGQCDSALRLFNSMP----RRSSISWNAMISGCLSNDKFYLARQLF 103
Query: 217 LSMNKVGNLVPSR--VTFLGLILACGQARNLDMGMSIHGRLVHSGLLSDFRLGTSIVDMY 390
M P+R V++ +I C + RNL + ++ ++S +++ Y
Sbjct: 104 EKM-------PTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVS----WNAMLSGY 152
Query: 391 SKCGKVECSRVIFEEELLERSLVSWNSLIMGYSQNGYDYEAVFLF 525
++ G V+ ++ IF+E + S +SWN ++ Y QNG +A LF
Sbjct: 153 AQNGYVKEAKEIFDEMPCKNS-ISWNGMLAAYVQNGRIEDARRLF 196