BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00056974
         (552 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008815228.1| ribosomal protein S12 (chloroplast) [Kalopan...    67   4e-09
ref|YP_008815183.1| ribosomal protein S12 (chloroplast) [Kalopan...    65   1e-08
ref|YP_008814967.1| ribosomal protein S12 (chloroplast) [Brassai...    65   1e-08
ref|YP_008814922.1| ribosomal protein S12 (chloroplast) [Brassai...    64   3e-08
ref|YP_008815054.1| ribosomal protein S12 (chloroplast) [Metapan...    63   4e-08
ref|YP_008815009.1| ribosomal protein S12 (chloroplast) [Metapan...    63   4e-08
gb|AGZ19166.1| ribosomal protein S12 (chloroplast) [Camellia sin...    59   1e-07
gb|ABX26257.1| ribosomal protein S12-like protein [Panax quinque...    58   2e-06

>ref|YP_008815228.1| ribosomal protein S12 (chloroplast) [Kalopanax septemlobus]
           gi|458599672|gb|AGG39364.1| ribosomal protein S12
           (chloroplast) [Kalopanax septemlobus]
          Length = 142

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = +3

Query: 162 GCPQRRGTCTRVYVRLVQIMSWDKRKETIFPVSMT 266
           GCPQRRGTCTRVYVRLVQIMSWDKRK+T F   +T
Sbjct: 26  GCPQRRGTCTRVYVRLVQIMSWDKRKKTFFQYQIT 60


>ref|YP_008815183.1| ribosomal protein S12 (chloroplast) [Kalopanax septemlobus]
           gi|458599659|gb|AGG39351.1| ribosomal protein S12
           (chloroplast) [Kalopanax septemlobus]
          Length = 143

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +3

Query: 162 GCPQRRGTCTRVYVRLVQIMSWDKRKETIF 251
           GCPQRRGTCTRVYVRLVQIMSWDKRK+T F
Sbjct: 26  GCPQRRGTCTRVYVRLVQIMSWDKRKKTFF 55


>ref|YP_008814967.1| ribosomal protein S12 (chloroplast) [Brassaiopsis hainla]
           gi|558603148|ref|YP_008815141.1| ribosomal protein S12
           (chloroplast) [Schefflera delavayi]
           gi|563940339|ref|YP_008814880.1| ribosomal protein S12
           (chloroplast) [Aralia undulata]
           gi|458599150|gb|AGG39016.1| ribosomal protein S12
           (chloroplast) [Aralia undulata]
           gi|458599252|gb|AGG39103.1| ribosomal protein S12
           (chloroplast) [Brassaiopsis hainla]
           gi|458599584|gb|AGG39277.1| ribosomal protein S12
           (chloroplast) [Schefflera delavayi]
          Length = 149

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 35/53 (66%), Positives = 38/53 (71%)
 Frame = +3

Query: 162 GCPQRRGTCTRVYVRLVQIMSWDKRKETIFPVSMTSTYQ*NGRTPFTI*TKKP 320
           GCPQRRGTCTRVYVRLVQIMSWDKRK+T    S+   Y+  G TP     KKP
Sbjct: 26  GCPQRRGTCTRVYVRLVQIMSWDKRKKTF--SSINDPYRRIGITP-----KKP 71


>ref|YP_008814922.1| ribosomal protein S12 (chloroplast) [Brassaiopsis hainla]
           gi|558603135|ref|YP_008815096.1| ribosomal protein S12
           (chloroplast) [Schefflera delavayi]
           gi|563940326|ref|YP_008814835.1| ribosomal protein S12
           (chloroplast) [Aralia undulata]
           gi|458599137|gb|AGG39003.1| ribosomal protein S12
           (chloroplast) [Aralia undulata]
           gi|458599239|gb|AGG39090.1| ribosomal protein S12
           (chloroplast) [Brassaiopsis hainla]
           gi|458599571|gb|AGG39264.1| ribosomal protein S12
           (chloroplast) [Schefflera delavayi]
          Length = 150

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 35/53 (66%), Positives = 38/53 (71%)
 Frame = +3

Query: 162 GCPQRRGTCTRVYVRLVQIMSWDKRKETIFPVSMTSTYQ*NGRTPFTI*TKKP 320
           GCPQRRGTCTRVYVRLVQIMSWDKRK+T    S+   Y+  G    TI  KKP
Sbjct: 26  GCPQRRGTCTRVYVRLVQIMSWDKRKKTF--SSINDPYRRIG----TITPKKP 72


>ref|YP_008815054.1| ribosomal protein S12 (chloroplast) [Metapanax delavayi]
           gi|458599431|gb|AGG39190.1| ribosomal protein S12
           (chloroplast) [Metapanax delavayi]
          Length = 161

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = +3

Query: 162 GCPQRRGTCTRVYVRLVQIMSWDKRKETIFPVS 260
           GCPQRRGTCTRVYVRLVQIMSWDKRK+T   ++
Sbjct: 26  GCPQRRGTCTRVYVRLVQIMSWDKRKKTFSSIN 58


>ref|YP_008815009.1| ribosomal protein S12 (chloroplast) [Metapanax delavayi]
           gi|458599418|gb|AGG39177.1| ribosomal protein S12
           (chloroplast) [Metapanax delavayi]
          Length = 165

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = +3

Query: 162 GCPQRRGTCTRVYVRLVQIMSWDKRKETIFPVS 260
           GCPQRRGTCTRVYVRLVQIMSWDKRK+T   ++
Sbjct: 26  GCPQRRGTCTRVYVRLVQIMSWDKRKKTFSSIN 58


>gb|AGZ19166.1| ribosomal protein S12 (chloroplast) [Camellia sinensis]
          Length = 60

 Score = 58.5 bits (140), Expect(2) = 1e-07
 Identities = 25/27 (92%), Positives = 25/27 (92%)
 Frame = +3

Query: 162 GCPQRRGTCTRVYVRLVQIMSWDKRKE 242
           GCPQRRGTCTRVYVRLVQIM WDK KE
Sbjct: 26  GCPQRRGTCTRVYVRLVQIMGWDKTKE 52



 Score = 23.5 bits (49), Expect(2) = 1e-07
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +1

Query: 229 TKERRLFFQYQ 261
           TKER+ FFQYQ
Sbjct: 50  TKERKQFFQYQ 60


>gb|ABX26257.1| ribosomal protein S12-like protein [Panax quinquefolius]
          Length = 65

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/33 (75%), Positives = 28/33 (84%)
 Frame = +3

Query: 162 GCPQRRGTCTRVYVRLVQIMSWDKRKETIFPVS 260
           GCPQRRGTCTR YV LVQIMSWDKRK+T   ++
Sbjct: 26  GCPQRRGTCTRGYVGLVQIMSWDKRKKTFSSIN 58