BLASTX nr result
ID: Akebia25_contig00056858
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00056858
(430 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura ... 190 2e-46
gb|AEQ37137.1| ribosomal protein S12 (chloroplast) [Ginkgo bilob... 184 8e-45
ref|XP_006827835.1| hypothetical protein AMTR_s02071p00004290 [A... 182 3e-44
sp|A4GYN8.1|RR12B_POPTR RecName: Full=30S ribosomal protein S12-... 179 5e-43
ref|XP_004154212.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 178 6e-43
ref|XP_007157192.1| hypothetical protein PHAVU_002G050200g, part... 177 1e-42
gb|EPS74518.1| hypothetical protein M569_00235, partial [Genlise... 177 1e-42
ref|YP_004940490.1| rps12 gene product (chloroplast) [Boea hygro... 177 1e-42
gb|EYU43439.1| hypothetical protein MIMGU_mgv11b016653mg, partia... 175 5e-42
gb|EXC18469.1| 30S ribosomal protein S12-B [Morus notabilis] 173 2e-41
gb|AGQ50378.1| ribosomal protein S12 (chloroplast) [Rumex acetosa] 173 3e-41
ref|XP_003632904.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 171 7e-41
ref|XP_003632903.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 170 2e-40
ref|XP_006588013.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 169 5e-40
ref|XP_004514805.1| PREDICTED: NAD(P)H-quinone oxidoreductase su... 168 8e-40
ref|XP_003576003.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 167 1e-39
ref|XP_003571809.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 167 1e-39
ref|XP_003559318.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 167 1e-39
ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [... 165 5e-39
gb|AGP51306.1| ribosomal protein S12 (chloroplast) [Triticum aes... 165 7e-39
>ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura stramonium]
gi|350996572|gb|AEQ37083.1| ribosomal protein S12
[Datura stramonium]
Length = 137
Score = 190 bits (482), Expect = 2e-46
Identities = 97/99 (97%), Positives = 97/99 (97%)
Frame = +2
Query: 5 ISCTVL*SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSV 184
ISCTVL S SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSV
Sbjct: 39 ISCTVLKSGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSV 98
Query: 185 VLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 301
VLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 99 VLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 137
>gb|AEQ37137.1| ribosomal protein S12 (chloroplast) [Ginkgo biloba]
gi|350996664|gb|AEQ37174.1| ribosomal protein S12
(chloroplast) [Ginkgo biloba]
Length = 141
Score = 184 bits (468), Expect = 8e-45
Identities = 95/103 (92%), Positives = 97/103 (94%)
Frame = +2
Query: 5 ISCTVL*SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSV 184
ISCTVL S KG+LSVNFST TPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHSV
Sbjct: 39 ISCTVLLSGGKGNLSVNFSTTTPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSV 98
Query: 185 VLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL*ILI 313
VLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL I+I
Sbjct: 99 VLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSALYIII 141
>ref|XP_006827835.1| hypothetical protein AMTR_s02071p00004290 [Amborella trichopoda]
gi|548832465|gb|ERM95251.1| hypothetical protein
AMTR_s02071p00004290 [Amborella trichopoda]
Length = 140
Score = 182 bits (463), Expect = 3e-44
Identities = 92/92 (100%), Positives = 92/92 (100%)
Frame = +2
Query: 26 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGR 205
SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGR
Sbjct: 49 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGR 108
Query: 206 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 301
VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 109 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 140
>sp|A4GYN8.1|RR12B_POPTR RecName: Full=30S ribosomal protein S12-B, chloroplastic
gi|133712086|gb|ABO36729.1| 30S ribosomal protein S12
[Populus trichocarpa]
Length = 135
Score = 179 bits (453), Expect = 5e-43
Identities = 90/95 (94%), Positives = 92/95 (96%)
Frame = +2
Query: 8 SCTVL*SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVV 187
+CT + S SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVV
Sbjct: 33 TCTRVYSGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVV 92
Query: 188 LVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS 292
LVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS
Sbjct: 93 LVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRS 127
>ref|XP_004154212.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Cucumis
sativus]
Length = 127
Score = 178 bits (452), Expect = 6e-43
Identities = 92/100 (92%), Positives = 94/100 (94%)
Frame = +2
Query: 2 KISCTVL*SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHS 181
+IS TVL S KGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHS
Sbjct: 28 QISRTVLSSGCKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHS 87
Query: 182 VVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 301
VVLVRGGRVKDLPG+RYHIVRG LDAVGVKDRQQGRSSAL
Sbjct: 88 VVLVRGGRVKDLPGLRYHIVRGNLDAVGVKDRQQGRSSAL 127
>ref|XP_007157192.1| hypothetical protein PHAVU_002G050200g, partial [Phaseolus
vulgaris] gi|561030607|gb|ESW29186.1| hypothetical
protein PHAVU_002G050200g, partial [Phaseolus vulgaris]
Length = 92
Score = 177 bits (450), Expect = 1e-42
Identities = 90/92 (97%), Positives = 90/92 (97%)
Frame = +2
Query: 26 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGR 205
S SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHSVVLVRGGR
Sbjct: 1 SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGR 60
Query: 206 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 301
VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 61 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 92
>gb|EPS74518.1| hypothetical protein M569_00235, partial [Genlisea aurea]
Length = 92
Score = 177 bits (450), Expect = 1e-42
Identities = 90/92 (97%), Positives = 90/92 (97%)
Frame = +2
Query: 26 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGR 205
S SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHS VLVRGGR
Sbjct: 1 SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSSVLVRGGR 60
Query: 206 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 301
VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 61 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 92
>ref|YP_004940490.1| rps12 gene product (chloroplast) [Boea hygrometrica]
gi|340549431|gb|AEK53253.1| ribosomal protein S12
(chloroplast) [Boea hygrometrica]
Length = 134
Score = 177 bits (450), Expect = 1e-42
Identities = 90/92 (97%), Positives = 90/92 (97%)
Frame = +2
Query: 26 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGR 205
S SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHS VLVRGGR
Sbjct: 43 SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSSVLVRGGR 102
Query: 206 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 301
VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 103 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 134
>gb|EYU43439.1| hypothetical protein MIMGU_mgv11b016653mg, partial [Mimulus
guttatus]
Length = 152
Score = 175 bits (444), Expect = 5e-42
Identities = 89/92 (96%), Positives = 89/92 (96%)
Frame = +2
Query: 26 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGR 205
S SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHS VLVRGGR
Sbjct: 61 SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSSVLVRGGR 120
Query: 206 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 301
VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 121 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 152
>gb|EXC18469.1| 30S ribosomal protein S12-B [Morus notabilis]
Length = 158
Score = 173 bits (439), Expect = 2e-41
Identities = 87/89 (97%), Positives = 88/89 (98%)
Frame = +2
Query: 35 KGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGRVKD 214
+GDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHSVVLVRGGRVKD
Sbjct: 17 QGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKD 76
Query: 215 LPGVRYHIVRGTLDAVGVKDRQQGRSSAL 301
LPGVRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 77 LPGVRYHIVRGTLDAVGVKDRQQGRSSAL 105
>gb|AGQ50378.1| ribosomal protein S12 (chloroplast) [Rumex acetosa]
Length = 89
Score = 173 bits (438), Expect = 3e-41
Identities = 87/88 (98%), Positives = 87/88 (98%)
Frame = +2
Query: 38 GDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGRVKDL 217
GDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHSVVLVRGGRVKDL
Sbjct: 2 GDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDL 61
Query: 218 PGVRYHIVRGTLDAVGVKDRQQGRSSAL 301
PGVRYHIVRGTLDAVGVKDRQQGRSSAL
Sbjct: 62 PGVRYHIVRGTLDAVGVKDRQQGRSSAL 89
>ref|XP_003632904.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Vitis
vinifera]
Length = 115
Score = 171 bits (434), Expect = 7e-41
Identities = 86/92 (93%), Positives = 87/92 (94%)
Frame = +2
Query: 26 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGR 205
S SKGDLS+N STITPKKPNSALRKVARVRLTSGFEIT YIPGIGHNSQEH VVLVRGGR
Sbjct: 24 SGSKGDLSINLSTITPKKPNSALRKVARVRLTSGFEITTYIPGIGHNSQEHFVVLVRGGR 83
Query: 206 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 301
VKDLPGVRYHIVRGTLDAVGVKD QQGRSSAL
Sbjct: 84 VKDLPGVRYHIVRGTLDAVGVKDHQQGRSSAL 115
>ref|XP_003632903.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Vitis
vinifera]
Length = 162
Score = 170 bits (430), Expect = 2e-40
Identities = 86/92 (93%), Positives = 86/92 (93%)
Frame = +2
Query: 26 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGR 205
S SKGDLSVN STITPKKPNSALRKVARVRLTSGFEIT YIPGIGHNSQEH VVLVRGGR
Sbjct: 71 SGSKGDLSVNLSTITPKKPNSALRKVARVRLTSGFEITTYIPGIGHNSQEHFVVLVRGGR 130
Query: 206 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 301
VKDLPGVRYHIVRGTLD VGVKD QQGRSSAL
Sbjct: 131 VKDLPGVRYHIVRGTLDPVGVKDHQQGRSSAL 162
>ref|XP_006588013.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Glycine
max]
Length = 169
Score = 169 bits (427), Expect = 5e-40
Identities = 86/91 (94%), Positives = 86/91 (94%)
Frame = +2
Query: 26 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGR 205
S SKGDLSVNFSTITPKKPNSALRKVARVRLT GFEITAYIPGI HN QEHSVVLVRGGR
Sbjct: 64 SGSKGDLSVNFSTITPKKPNSALRKVARVRLTFGFEITAYIPGIDHNLQEHSVVLVRGGR 123
Query: 206 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSA 298
VKDLPGV YHIVRGTLDAVGVKDRQQGRSSA
Sbjct: 124 VKDLPGVTYHIVRGTLDAVGVKDRQQGRSSA 154
>ref|XP_004514805.1| PREDICTED: NAD(P)H-quinone oxidoreductase subunit 2 B,
chloroplastic-like [Cicer arietinum]
Length = 864
Score = 168 bits (425), Expect = 8e-40
Identities = 83/90 (92%), Positives = 87/90 (96%)
Frame = +2
Query: 26 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGR 205
++ K DLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHSVVLVRGGR
Sbjct: 70 NEDKDDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGR 129
Query: 206 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSS 295
VKDLPGVRYHIVRGTLDAVGVKDRQQGR++
Sbjct: 130 VKDLPGVRYHIVRGTLDAVGVKDRQQGRTA 159
>ref|XP_003576003.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like
[Brachypodium distachyon]
Length = 95
Score = 167 bits (423), Expect = 1e-39
Identities = 84/91 (92%), Positives = 87/91 (95%)
Frame = +2
Query: 29 DSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGRV 208
DSKGDLSV+FSTI PKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHSVVLVRGGRV
Sbjct: 5 DSKGDLSVDFSTINPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV 64
Query: 209 KDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 301
KDLPGVRY I+RGTLDAV VK+RQQGRSSAL
Sbjct: 65 KDLPGVRYRIIRGTLDAVAVKNRQQGRSSAL 95
>ref|XP_003571809.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like
[Brachypodium distachyon]
Length = 94
Score = 167 bits (423), Expect = 1e-39
Identities = 84/91 (92%), Positives = 87/91 (95%)
Frame = +2
Query: 29 DSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGRV 208
DSKGDLSV+FSTI PKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHSVVLVRGGRV
Sbjct: 4 DSKGDLSVDFSTINPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV 63
Query: 209 KDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 301
KDLPGVRY I+RGTLDAV VK+RQQGRSSAL
Sbjct: 64 KDLPGVRYRIIRGTLDAVAVKNRQQGRSSAL 94
>ref|XP_003559318.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like
[Brachypodium distachyon]
Length = 93
Score = 167 bits (423), Expect = 1e-39
Identities = 84/91 (92%), Positives = 87/91 (95%)
Frame = +2
Query: 29 DSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGRV 208
DSKGDLSV+FSTI PKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHSVVLVRGGRV
Sbjct: 3 DSKGDLSVDFSTINPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRV 62
Query: 209 KDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 301
KDLPGVRY I+RGTLDAV VK+RQQGRSSAL
Sbjct: 63 KDLPGVRYRIIRGTLDAVAVKNRQQGRSSAL 93
>ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [Medicago truncatula]
gi|355488626|gb|AES69829.1| NAD(P)H-quinone
oxidoreductase subunit 2 A [Medicago truncatula]
Length = 871
Score = 165 bits (418), Expect = 5e-39
Identities = 82/87 (94%), Positives = 84/87 (96%)
Frame = +2
Query: 26 SDSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGR 205
++ K DLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHSVVLVRGGR
Sbjct: 76 NEDKDDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGR 135
Query: 206 VKDLPGVRYHIVRGTLDAVGVKDRQQG 286
VKDLPGVRYHIVRGTLDAVGVKDRQQG
Sbjct: 136 VKDLPGVRYHIVRGTLDAVGVKDRQQG 162
>gb|AGP51306.1| ribosomal protein S12 (chloroplast) [Triticum aestivum]
Length = 133
Score = 165 bits (417), Expect = 7e-39
Identities = 83/90 (92%), Positives = 86/90 (95%)
Frame = +2
Query: 32 SKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGRVK 211
SKGDLSV+FSTI PKKPNSALRKVARVRLTSGFEITAYIPGIGHN QEHSVVLVRGGRVK
Sbjct: 44 SKGDLSVDFSTINPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK 103
Query: 212 DLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 301
DLPGVRY I+RGTLDAV VK+RQQGRSSAL
Sbjct: 104 DLPGVRYRIIRGTLDAVAVKNRQQGRSSAL 133