BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00055953
         (564 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containi...   258   7e-67
ref|XP_006483071.1| PREDICTED: pentatricopeptide repeat-containi...   251   1e-64
ref|XP_006483070.1| PREDICTED: pentatricopeptide repeat-containi...   251   1e-64
ref|XP_006438781.1| hypothetical protein CICLE_v10033606mg [Citr...   251   1e-64
ref|XP_007226957.1| hypothetical protein PRUPE_ppa002695mg [Prun...   248   1e-63
ref|XP_007045956.1| Pentatricopeptide repeat superfamily protein...   243   3e-62
ref|XP_002512123.1| pentatricopeptide repeat-containing protein,...   240   2e-61
ref|XP_004298396.1| PREDICTED: pentatricopeptide repeat-containi...   237   2e-60
ref|XP_007158618.1| hypothetical protein PHAVU_002G167800g [Phas...   234   1e-59
ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containi...   233   3e-59
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   231   1e-58
ref|XP_002316102.2| pentatricopeptide repeat-containing family p...   229   3e-58
ref|XP_004514248.1| PREDICTED: pentatricopeptide repeat-containi...   228   6e-58
ref|XP_003607763.1| Pentatricopeptide repeat-containing protein ...   224   9e-57
ref|XP_006292336.1| hypothetical protein CARUB_v10018547mg [Caps...   221   1e-55
ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp....   218   9e-55
ref|XP_006395709.1| hypothetical protein EUTSA_v10005367mg, part...   217   1e-54
ref|NP_178437.1| pentatricopeptide repeat-containing protein [Ar...   214   9e-54
ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group] g...   214   1e-53
ref|XP_006656717.1| PREDICTED: pentatricopeptide repeat-containi...   206   3e-51

>ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
           gi|147818711|emb|CAN65040.1| hypothetical protein
           VITISV_009460 [Vitis vinifera]
          Length = 700

 Score =  258 bits (659), Expect = 7e-67
 Identities = 126/188 (67%), Positives = 152/188 (80%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   EDVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRM 182
           ED T  NALV MYAKCH IG+A YVF+ + +KDVIAWNS+I+GY+QNGYAYEAL  F +M
Sbjct: 371 EDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQM 430

Query: 183 RYYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGD 359
           R      DA+TLVSVLSACAS+GA RVG +L  YA + GLLS +++VGTALLN Y+KCGD
Sbjct: 431 RSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGD 490

Query: 360 FGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSA 539
              AR +FDEMGEKN +TWSAM+ GYG+ GD + SL LFG+MLKE LEPNEV+FT+ILSA
Sbjct: 491 AESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSA 550

Query: 540 CSHTGMIG 563
           CSH+GM+G
Sbjct: 551 CSHSGMLG 558



 Score =  132 bits (331), Expect = 8e-29
 Identities = 76/186 (40%), Positives = 106/186 (56%), Gaps = 1/186 (0%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V   LV MYAKC  + ++  VFD IL+++V+ W SMI GY QN    E L+ F RMR
Sbjct: 171 DSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMR 230

Query: 186 YYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
                 +  TL S+++AC  LGAL  G  +  Y  + G    N  + T LL++Y KCGD 
Sbjct: 231 EGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGF-DLNSFLVTPLLDLYFKCGDI 289

Query: 363 GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSAC 542
             A  VFDE+   + V+W+AM+ GY   G    +L LF +   ++L PN V  +S+LSAC
Sbjct: 290 RDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSAC 349

Query: 543 SHTGMI 560
           + TG +
Sbjct: 350 AQTGSL 355



 Score =  118 bits (296), Expect = 9e-25
 Identities = 65/177 (36%), Positives = 105/177 (59%), Gaps = 1/177 (0%)
 Frame = +3

Query: 27  LVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMRYYFAI-D 203
           L+ +Y KC  I +A  VFD +   D+++W +MI GY+Q GY  EAL  F   R+   + +
Sbjct: 279 LLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPN 338

Query: 204 AVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDFGCARRVF 383
            VT  SVLSACA  G+L +G ++     + G  S +     AL++MY+KC   G AR VF
Sbjct: 339 TVTTSSVLSACAQTGSLNMGRSVHCLGIKLG--SEDATFENALVDMYAKCHMIGDARYVF 396

Query: 384 DEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSACSHTG 554
           + + +K+ + W++++SGY  +G    +L LF +M  +++ P+ +   S+LSAC+  G
Sbjct: 397 ETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVG 453



 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 59/188 (31%), Positives = 93/188 (49%), Gaps = 2/188 (1%)
 Frame = +3

Query: 3   EDVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFF--R 176
           ED+     LV +Y     +  A  +FD I N D+ +W  MI  Y  N    E + F+  R
Sbjct: 69  EDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLNDSYSEIVQFYNTR 128

Query: 177 RMRYYFAIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCG 356
             +     D V    VL AC+ L     G  L     + G  S +  V T L++MY+KC 
Sbjct: 129 LRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVG--SPDSFVLTGLVDMYAKCR 186

Query: 357 DFGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILS 536
           +   +RRVFDE+ ++N V W++M+ GY  +  +   L+LF  M +  +E N+    S+++
Sbjct: 187 EVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVT 246

Query: 537 ACSHTGMI 560
           AC+  G +
Sbjct: 247 ACTKLGAL 254


>ref|XP_006483071.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 597

 Score =  251 bits (640), Expect = 1e-64
 Identities = 125/189 (66%), Positives = 150/189 (79%), Gaps = 2/189 (1%)
 Frame = +3

Query: 3   EDVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRM 182
           ED TV NALV MYAKCH I +A Y+F+    KDVIAWNS+I+GYSQNG AY +L  F +M
Sbjct: 267 EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGYSQNGPAYASLELFHQM 326

Query: 183 RYYFAI--DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCG 356
           R    +  DAVTLVSV+SACASLGA++VG +L AY+T++GLLSSN++VGTALLN Y+KCG
Sbjct: 327 RLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 386

Query: 357 DFGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILS 536
           D   AR VFD M EKN VTWSAM+ GYGM GD  GSL LF +ML E ++PNEV+FT+ILS
Sbjct: 387 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 446

Query: 537 ACSHTGMIG 563
           ACSHTGM+G
Sbjct: 447 ACSHTGMVG 455



 Score =  137 bits (345), Expect = 2e-30
 Identities = 81/184 (44%), Positives = 108/184 (58%), Gaps = 1/184 (0%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V   LV MYAKC  IG +  VFD  L+K+V++W SMI GY QN  A E L+ F RMR
Sbjct: 67  DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 126

Query: 186 YYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
             F   + +TL S+++ACA L AL  G  L  Y  + G +  N H+ TALL+MY KCG+ 
Sbjct: 127 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNI 185

Query: 363 GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSAC 542
             AR VFDE+   + V+W+AM+ GY   G  + +L LF +    +  PN V   S+LSA 
Sbjct: 186 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 245

Query: 543 SHTG 554
           +  G
Sbjct: 246 AQLG 249



 Score = 75.5 bits (184), Expect = 9e-12
 Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
 Frame = +3

Query: 114 NSMITGYSQNGYAYEALIFFRRMRYYFAI-DAVTLVSVLSACASLGALRVGCALQAYATR 290
           N MI  Y  N    + + F++ MR      D      VL AC  L  +  G  +     +
Sbjct: 3   NVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 62

Query: 291 EGLLSSNIHVGTALLNMYSKCGDFGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLI 470
            G    +  V T L++MY+KC D G +R+VFDE  +KN V+W++M++GY  +      L+
Sbjct: 63  VG--GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 120

Query: 471 LFGEMLKENLEPNEVVFTSILSACS 545
           LF  M +  +E N++   S+++AC+
Sbjct: 121 LFNRMREGFVEGNQITLGSLVTACA 145


>ref|XP_006483070.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 709

 Score =  251 bits (640), Expect = 1e-64
 Identities = 125/189 (66%), Positives = 150/189 (79%), Gaps = 2/189 (1%)
 Frame = +3

Query: 3   EDVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRM 182
           ED TV NALV MYAKCH I +A Y+F+    KDVIAWNS+I+GYSQNG AY +L  F +M
Sbjct: 379 EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGYSQNGPAYASLELFHQM 438

Query: 183 RYYFAI--DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCG 356
           R    +  DAVTLVSV+SACASLGA++VG +L AY+T++GLLSSN++VGTALLN Y+KCG
Sbjct: 439 RLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 498

Query: 357 DFGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILS 536
           D   AR VFD M EKN VTWSAM+ GYGM GD  GSL LF +ML E ++PNEV+FT+ILS
Sbjct: 499 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 558

Query: 537 ACSHTGMIG 563
           ACSHTGM+G
Sbjct: 559 ACSHTGMVG 567



 Score =  137 bits (345), Expect = 2e-30
 Identities = 81/184 (44%), Positives = 108/184 (58%), Gaps = 1/184 (0%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V   LV MYAKC  IG +  VFD  L+K+V++W SMI GY QN  A E L+ F RMR
Sbjct: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238

Query: 186 YYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
             F   + +TL S+++ACA L AL  G  L  Y  + G +  N H+ TALL+MY KCG+ 
Sbjct: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNI 297

Query: 363 GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSAC 542
             AR VFDE+   + V+W+AM+ GY   G  + +L LF +    +  PN V   S+LSA 
Sbjct: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357

Query: 543 SHTG 554
           +  G
Sbjct: 358 AQLG 361



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 55/174 (31%), Positives = 88/174 (50%), Gaps = 1/174 (0%)
 Frame = +3

Query: 27  LVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMRYYFAI-D 203
           LV MY     +  A  VFD + N D  ++  MI  Y  N    + + F++ MR      D
Sbjct: 86  LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145

Query: 204 AVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDFGCARRVF 383
                 VL AC  L  +  G  +     + G    +  V T L++MY+KC D G +R+VF
Sbjct: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVF 203

Query: 384 DEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSACS 545
           DE  +KN V+W++M++GY  +      L+LF  M +  +E N++   S+++AC+
Sbjct: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257


>ref|XP_006438781.1| hypothetical protein CICLE_v10033606mg [Citrus clementina]
           gi|557540977|gb|ESR52021.1| hypothetical protein
           CICLE_v10033606mg [Citrus clementina]
          Length = 716

 Score =  251 bits (640), Expect = 1e-64
 Identities = 125/189 (66%), Positives = 150/189 (79%), Gaps = 2/189 (1%)
 Frame = +3

Query: 3   EDVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRM 182
           ED TV NALV MYAKCH I +A Y+F+    KDVIAWNS+I+GYSQNG AY +L  F +M
Sbjct: 379 EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGYSQNGPAYASLELFHQM 438

Query: 183 RYYFAI--DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCG 356
           R    +  DAVTLVSV+SACASLGA++VG +L AY+T++GLLSSN++VGTALLN Y+KCG
Sbjct: 439 RLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 498

Query: 357 DFGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILS 536
           D   AR VFD M EKN VTWSAM+ GYGM GD  GSL LF +ML E ++PNEV+FT+ILS
Sbjct: 499 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 558

Query: 537 ACSHTGMIG 563
           ACSHTGM+G
Sbjct: 559 ACSHTGMVG 567



 Score =  137 bits (345), Expect = 2e-30
 Identities = 81/184 (44%), Positives = 108/184 (58%), Gaps = 1/184 (0%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V   LV MYAKC  IG +  VFD  L+K+V++W SMI GY QN  A E L+ F RMR
Sbjct: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238

Query: 186 YYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
             F   + +TL S+++ACA L AL  G  L  Y  + G +  N H+ TALL+MY KCG+ 
Sbjct: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNI 297

Query: 363 GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSAC 542
             AR VFDE+   + V+W+AM+ GY   G  + +L LF +    +  PN V   S+LSA 
Sbjct: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357

Query: 543 SHTG 554
           +  G
Sbjct: 358 AQLG 361



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 55/174 (31%), Positives = 88/174 (50%), Gaps = 1/174 (0%)
 Frame = +3

Query: 27  LVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMRYYFAI-D 203
           LV MY     +  A  VFD + N D  ++  MI  Y  N    + + F++ MR      D
Sbjct: 86  LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145

Query: 204 AVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDFGCARRVF 383
                 VL AC  L  +  G  +     + G    +  V T L++MY+KC D G +R+VF
Sbjct: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVF 203

Query: 384 DEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSACS 545
           DE  +KN V+W++M++GY  +      L+LF  M +  +E N++   S+++AC+
Sbjct: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257


>ref|XP_007226957.1| hypothetical protein PRUPE_ppa002695mg [Prunus persica]
           gi|462423893|gb|EMJ28156.1| hypothetical protein
           PRUPE_ppa002695mg [Prunus persica]
          Length = 644

 Score =  248 bits (632), Expect = 1e-63
 Identities = 123/187 (65%), Positives = 151/187 (80%), Gaps = 1/187 (0%)
 Frame = +3

Query: 3   EDVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRM 182
           ED TV NALV MYAKCH IG+A Y+F+ IL+K+VIAWNS+I+GYSQNG AYEAL  F +M
Sbjct: 315 EDSTVRNALVDMYAKCHMIGDARYIFETILDKNVIAWNSIISGYSQNGSAYEALQLFHQM 374

Query: 183 RYY-FAIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGD 359
           R   F+ DA TL SVLSAC +LG L VG +L A++ ++GLL+SNI+VGTALLN+Y+KCGD
Sbjct: 375 RSESFSHDAFTLASVLSACTTLGFLSVGSSLHAHSLKDGLLTSNIYVGTALLNLYAKCGD 434

Query: 360 FGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSA 539
              AR VFD MG KN VTWSAM+ GYG+ GD  GSL LF +MLK++LEP EV+FT++LSA
Sbjct: 435 AESARLVFDGMGVKNTVTWSAMIGGYGVQGDSRGSLALFSDMLKKHLEPTEVIFTTLLSA 494

Query: 540 CSHTGMI 560
           CSHTGM+
Sbjct: 495 CSHTGMV 501



 Score =  117 bits (293), Expect = 2e-24
 Identities = 72/183 (39%), Positives = 103/183 (56%), Gaps = 1/183 (0%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V   LV +YAKC  I  +  VFD I++ +V+ W SMI GY QN    + L+ F RMR
Sbjct: 115 DSFVLTGLVDVYAKCGWIECSRAVFDGIVDGNVVCWTSMIVGYVQNDCPQDGLVLFNRMR 174

Query: 186 YYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
                 +  TL SVL+AC  L AL  G  +  +  + G+  S+  V T+LL+MY KCGD 
Sbjct: 175 EELIKGNQFTLGSVLTACTKLRALHQGKWIHGHLIKTGIEVSSFLV-TSLLDMYVKCGDI 233

Query: 363 GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSAC 542
             AR +FDE+   + V+W+AM+ GY   G  + +L LF +     L PN +   S+LS+C
Sbjct: 234 RYARSIFDELPAIDLVSWTAMIVGYTQSGCPDEALKLFTDEKWVGLLPNSITTASVLSSC 293

Query: 543 SHT 551
           + +
Sbjct: 294 AQS 296



 Score =  111 bits (278), Expect = 1e-22
 Identities = 61/180 (33%), Positives = 103/180 (57%), Gaps = 1/180 (0%)
 Frame = +3

Query: 24  ALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMRYYFAI- 200
           +L+ MY KC  I  A  +FD +   D+++W +MI GY+Q+G   EAL  F   ++   + 
Sbjct: 222 SLLDMYVKCGDIRYARSIFDELPAIDLVSWTAMIVGYTQSGCPDEALKLFTDEKWVGLLP 281

Query: 201 DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDFGCARRV 380
           +++T  SVLS+CA    L +G ++     + GL  S +    AL++MY+KC   G AR +
Sbjct: 282 NSITTASVLSSCAQSCNLNLGRSIHGLGIKLGLEDSTVR--NALVDMYAKCHMIGDARYI 339

Query: 381 FDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSACSHTGMI 560
           F+ + +KN + W++++SGY  +G    +L LF +M  E+   +     S+LSAC+  G +
Sbjct: 340 FETILDKNVIAWNSIISGYSQNGSAYEALQLFHQMRSESFSHDAFTLASVLSACTTLGFL 399



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 1/181 (0%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D+     L+ +Y     +  A  +FD + + D  +W  M+  Y  +    E + F+  MR
Sbjct: 15  DLLCRTKLISLYGSFGYVKCARLLFDQMPSPDFYSWKVMLRWYFMHNLYAEVMGFYTSMR 74

Query: 186 YYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
                 D V    VL AC+ L     G  +     +  + S +  V T L+++Y+KCG  
Sbjct: 75  ICVREHDNVVFSIVLKACSELRDFNEGRKVHCQIVK--VASPDSFVLTGLVDVYAKCGWI 132

Query: 363 GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSAC 542
            C+R VFD + + N V W++M+ GY  +      L+LF  M +E ++ N+    S+L+AC
Sbjct: 133 ECSRAVFDGIVDGNVVCWTSMIVGYVQNDCPQDGLVLFNRMREELIKGNQFTLGSVLTAC 192

Query: 543 S 545
           +
Sbjct: 193 T 193


>ref|XP_007045956.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508709891|gb|EOY01788.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 714

 Score =  243 bits (619), Expect = 3e-62
 Identities = 118/188 (62%), Positives = 151/188 (80%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   EDVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRM 182
           +D TV NALV MYAKC  IG+A Y+F+ + +K++IAWNS+I+GYSQNG AYEA   F +M
Sbjct: 385 KDSTVINALVDMYAKCGMIGDARYIFETVSDKNIIAWNSIISGYSQNGSAYEAFELFHQM 444

Query: 183 RYY-FAIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGD 359
           R    + DAVT+VS+ SACASLGAL+VG +L AY+T+ GLLSS+++VGTA+LN Y+K GD
Sbjct: 445 RSKSVSPDAVTVVSIFSACASLGALQVGSSLHAYSTKGGLLSSSVYVGTAVLNFYAKSGD 504

Query: 360 FGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSA 539
              AR +FD MGEKN VTWSAM+ GYG+ GD +GSL LF +M+KEN+EPNEV+FT+ILSA
Sbjct: 505 SKSARAIFDSMGEKNTVTWSAMIGGYGIQGDSSGSLALFNDMVKENVEPNEVIFTTILSA 564

Query: 540 CSHTGMIG 563
           C HTG +G
Sbjct: 565 CGHTGSLG 572



 Score =  129 bits (324), Expect = 5e-28
 Identities = 69/179 (38%), Positives = 109/179 (60%), Gaps = 1/179 (0%)
 Frame = +3

Query: 27  LVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMRYYFAI-D 203
           L+ MY KC  I +A  VFD + + D+++W +MI GYSQ+G+  EAL  F   +++  + +
Sbjct: 293 LLDMYVKCGSIRDARSVFDELSSVDLVSWTAMIVGYSQSGFPDEALKLFIDKKWFGILPN 352

Query: 204 AVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDFGCARRVF 383
           AVT+ S+LSACA L  L  G  + A   + GL  S   V  AL++MY+KCG  G AR +F
Sbjct: 353 AVTIASLLSACAQLSNLSFGRLVHALGIQLGLKDST--VINALVDMYAKCGMIGDARYIF 410

Query: 384 DEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSACSHTGMI 560
           + + +KN + W++++SGY  +G    +  LF +M  +++ P+ V   SI SAC+  G +
Sbjct: 411 ETVSDKNIIAWNSIISGYSQNGSAYEAFELFHQMRSKSVSPDAVTVVSIFSACASLGAL 469



 Score =  126 bits (316), Expect = 4e-27
 Identities = 74/181 (40%), Positives = 104/181 (57%), Gaps = 1/181 (0%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V   LV MYAKC  I  +  VF  I++++V++W SMI GY QN  A +AL+ F RMR
Sbjct: 185 DSFVQTGLVDMYAKCGEIECSRKVFSEIIDRNVVSWTSMIAGYVQNDCAEDALVLFNRMR 244

Query: 186 YYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
                 +  TL S+++AC  LGAL  G  +  Y  + G+  ++  V T LL+MY KCG  
Sbjct: 245 EAMVEGNEFTLGSLVTACGKLGALHQGKWVHGYVIKNGIELNSYSV-TTLLDMYVKCGSI 303

Query: 363 GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSAC 542
             AR VFDE+   + V+W+AM+ GY   G  + +L LF +     + PN V   S+LSAC
Sbjct: 304 RDARSVFDELSSVDLVSWTAMIVGYSQSGFPDEALKLFIDKKWFGILPNAVTIASLLSAC 363

Query: 543 S 545
           +
Sbjct: 364 A 364



 Score =  103 bits (257), Expect = 3e-20
 Identities = 59/186 (31%), Positives = 97/186 (52%), Gaps = 1/186 (0%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D+     LV +Y     IG A  +FD I + D  +W  MI  Y  N    E + F+ RMR
Sbjct: 85  DLLCDTKLVSLYGLFGHIGCARLMFDQIPDPDFYSWKVMIRWYFLNDLCMEIIGFYARMR 144

Query: 186 YYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
               + D V    VL AC+ +  +  G  +     + G  + +  V T L++MY+KCG+ 
Sbjct: 145 MSVRMCDNVVFSVVLKACSEMRDIDEGRKVHCQIVKAG--NPDSFVQTGLVDMYAKCGEI 202

Query: 363 GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSAC 542
            C+R+VF E+ ++N V+W++M++GY  +     +L+LF  M +  +E NE    S+++AC
Sbjct: 203 ECSRKVFSEIIDRNVVSWTSMIAGYVQNDCAEDALVLFNRMREAMVEGNEFTLGSLVTAC 262

Query: 543 SHTGMI 560
              G +
Sbjct: 263 GKLGAL 268


>ref|XP_002512123.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549303|gb|EEF50792.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 456

 Score =  240 bits (612), Expect = 2e-61
 Identities = 118/185 (63%), Positives = 146/185 (78%), Gaps = 1/185 (0%)
 Frame = +3

Query: 12  TVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMRYY 191
           T+ NALVHMYAKCH   +ASY+F+    KDV++WNS+I+G SQ G  YEAL  F+RMR  
Sbjct: 240 TLMNALVHMYAKCHMNRDASYLFETASEKDVVSWNSIISGCSQMGSPYEALDLFQRMRKE 299

Query: 192 -FAIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDFGC 368
             + DAVTLVSV SACASLGAL+VG +L AY+ +EGLLSSN++V TALL  Y+KCGD G 
Sbjct: 300 SVSPDAVTLVSVFSACASLGALQVGSSLHAYSVKEGLLSSNVYVSTALLTFYAKCGDAGS 359

Query: 369 ARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSACSH 548
           AR +FD M EKN VTWSAM+ GYG+ GD  GSL +F +ML++ L+PNEV+FT+ILSACSH
Sbjct: 360 ARTIFDGMQEKNTVTWSAMIGGYGVQGDAGGSLSIFNDMLRQELKPNEVIFTTILSACSH 419

Query: 549 TGMIG 563
           TGM+G
Sbjct: 420 TGMVG 424



 Score =  117 bits (292), Expect = 3e-24
 Identities = 72/184 (39%), Positives = 98/184 (53%), Gaps = 1/184 (0%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V   L   YAKC  I  +   FD  L+++V++W SMI GY QN    E LI F RMR
Sbjct: 37  DSFVLTGLTDFYAKCGEIECSRCAFDENLDRNVVSWTSMIVGYVQNDCPVEGLILFNRMR 96

Query: 186 Y-YFAIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
                 +  TL  +++AC  LGAL  G     YA + G+   N ++ TALL+MY KCG  
Sbjct: 97  EGLIEGNQFTLGILVTACTKLGALHQGKCFHGYAIKSGV-QLNSYLMTALLDMYVKCGVI 155

Query: 363 GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSAC 542
             AR VFDE+   + V+W+AM+ GY        +L LF +     + PN+V   S L+AC
Sbjct: 156 RDARSVFDELSSIDLVSWTAMIVGYTQSNLSYDALKLFLDKKWAGILPNDVTIVSALAAC 215

Query: 543 SHTG 554
           +  G
Sbjct: 216 ARMG 219



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 35/112 (31%), Positives = 58/112 (51%)
 Frame = +3

Query: 225 LSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDFGCARRVFDEMGEKN 404
           + AC+ L  +  G  L     + G   S   V T L + Y+KCG+  C+R  FDE  ++N
Sbjct: 11  IRACSELRDIDEGRKLHCQIIKAGPPDS--FVLTGLTDFYAKCGEIECSRCAFDENLDRN 68

Query: 405 KVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSACSHTGMI 560
            V+W++M+ GY  +      LILF  M +  +E N+     +++AC+  G +
Sbjct: 69  VVSWTSMIVGYVQNDCPVEGLILFNRMREGLIEGNQFTLGILVTACTKLGAL 120


>ref|XP_004298396.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 706

 Score =  237 bits (604), Expect = 2e-60
 Identities = 118/187 (63%), Positives = 147/187 (78%), Gaps = 1/187 (0%)
 Frame = +3

Query: 3   EDVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRM 182
           E+ +V NALV MYAKCH I +A Y+FD  L+K+VI W+S+I GYSQNG AYEAL  F +M
Sbjct: 380 EESSVRNALVDMYAKCHMISDARYIFDTTLDKNVITWSSIICGYSQNGLAYEALQLFHQM 439

Query: 183 RYY-FAIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGD 359
           R   F+ DA TLVSVLSACASLG L+VG ++ AY+ ++G+ +SN++ GTALLN Y+KCGD
Sbjct: 440 RSESFSPDAFTLVSVLSACASLGFLQVGSSVHAYSIKDGISTSNLYAGTALLNFYAKCGD 499

Query: 360 FGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSA 539
              AR VFD M EK+ +TWSAM+ GYG+ GD +GS+ LF  MLKE LEPNEVVFT+ILSA
Sbjct: 500 AESARLVFDGMKEKSSITWSAMIGGYGIQGDSSGSVELFNYMLKERLEPNEVVFTTILSA 559

Query: 540 CSHTGMI 560
           CSHTGM+
Sbjct: 560 CSHTGMV 566



 Score =  121 bits (303), Expect = 1e-25
 Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 1/184 (0%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V   L+ +YAKC  I  +  VFD I++++V+ W SMI GY QN    + L+ F RMR
Sbjct: 180 DGFVLTGLLDVYAKCGWIEWSRRVFDGIVDRNVVCWTSMIFGYVQNECPEDGLVLFNRMR 239

Query: 186 YYFA-IDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
                 +  TL SVL+AC  L AL  G  +  Y  + G+  +N+ V T+LL+MY KCGD 
Sbjct: 240 EGMVEANQFTLGSVLTACTKLRALHQGKWIHGYLIKNGIEVNNVLV-TSLLDMYVKCGDI 298

Query: 363 GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSAC 542
             AR +FDE    + V W+AM+ GY   G    +L LF +   + L PN +   S+LS+C
Sbjct: 299 RDARSIFDEHSMIDLVWWTAMIVGYTQSGCPLEALKLFTDKRWDGLLPNSITTASVLSSC 358

Query: 543 SHTG 554
           + +G
Sbjct: 359 AQSG 362



 Score =  117 bits (292), Expect = 3e-24
 Identities = 65/180 (36%), Positives = 103/180 (57%), Gaps = 1/180 (0%)
 Frame = +3

Query: 24  ALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMRYYFAI- 200
           +L+ MY KC  I +A  +FD     D++ W +MI GY+Q+G   EAL  F   R+   + 
Sbjct: 287 SLLDMYVKCGDIRDARSIFDEHSMIDLVWWTAMIVGYTQSGCPLEALKLFTDKRWDGLLP 346

Query: 201 DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDFGCARRV 380
           +++T  SVLS+CA  G L +G ++     + GL  S++    AL++MY+KC     AR +
Sbjct: 347 NSITTASVLSSCAQSGDLNMGRSVHGLGIKLGLEESSVR--NALVDMYAKCHMISDARYI 404

Query: 381 FDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSACSHTGMI 560
           FD   +KN +TWS+++ GY  +G    +L LF +M  E+  P+     S+LSAC+  G +
Sbjct: 405 FDTTLDKNVITWSSIICGYSQNGLAYEALQLFHQMRSESFSPDAFTLVSVLSACASLGFL 464



 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 58/178 (32%), Positives = 90/178 (50%), Gaps = 5/178 (2%)
 Frame = +3

Query: 27  LVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMRYYF-AID 203
           L+ +YA   R+  A  VFD I + D  +  +M+  Y  +    E L  FRRMR +    D
Sbjct: 87  LISLYASFGRVDCARLVFDEIPSPDFYSSKAMVRWYFLHNLYGEVLGLFRRMRMWVRERD 146

Query: 204 AVTLVSVLSACASLGAL----RVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDFGCA 371
            V    VL AC+    +    +V C +   A  +G       V T LL++Y+KCG    +
Sbjct: 147 NVVYSIVLKACSEARDVNEGRKVHCEIVKAACPDGF------VLTGLLDVYAKCGWIEWS 200

Query: 372 RRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSACS 545
           RRVFD + ++N V W++M+ GY  +      L+LF  M +  +E N+    S+L+AC+
Sbjct: 201 RRVFDGIVDRNVVCWTSMIFGYVQNECPEDGLVLFNRMREGMVEANQFTLGSVLTACT 258


>ref|XP_007158618.1| hypothetical protein PHAVU_002G167800g [Phaseolus vulgaris]
           gi|561032033|gb|ESW30612.1| hypothetical protein
           PHAVU_002G167800g [Phaseolus vulgaris]
          Length = 702

 Score =  234 bits (597), Expect = 1e-59
 Identities = 119/188 (63%), Positives = 149/188 (79%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   EDVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRM 182
           ED  V NALV MYAKC  + +A  VF+ I +KDV++WNS+I+G +Q+G   EAL  F+RM
Sbjct: 375 EDPPVRNALVDMYAKCGLVLDARNVFESI-DKDVVSWNSIISGCAQSGEECEALELFKRM 433

Query: 183 RY-YFAIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGD 359
           R   F+ DAVT+V VLSACASLGAL+ GC++ A + ++GL+ S+I+VGTALLN Y+KCGD
Sbjct: 434 RLELFSPDAVTVVGVLSACASLGALQFGCSVHALSLKDGLVLSSIYVGTALLNFYAKCGD 493

Query: 360 FGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSA 539
              AR VFD MGEKN VTW AM+SGYGMHGD NGSL+LF +MLKE LEPNE VFT+IL+A
Sbjct: 494 AKAARMVFDSMGEKNVVTWGAMISGYGMHGDGNGSLVLFRDMLKEELEPNEAVFTTILAA 553

Query: 540 CSHTGMIG 563
           CSH+GM+G
Sbjct: 554 CSHSGMVG 561



 Score =  116 bits (290), Expect = 5e-24
 Identities = 73/185 (39%), Positives = 101/185 (54%), Gaps = 6/185 (3%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  +  +LV  YAKC ++  A   F+ I ++DV++W SMI  Y QN  A E L  F RM+
Sbjct: 170 DSFLLTSLVDAYAKCGQLPHARRAFEEIPHRDVVSWTSMIVAYVQNECAREGLTLFNRMQ 229

Query: 186 YYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
             F   +  T+ SV+SAC SLG L  G  +  +  + G+ S N  + T+LLN Y KCG  
Sbjct: 230 EAFVHGNEFTMGSVVSACTSLGWLHQGKWVHGFVIKNGI-SVNSFLTTSLLNFYVKCGSV 288

Query: 363 GCARRVFDE-----MGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTS 527
           G AR VFDE        ++ V+W+AM+ GY   G    ++ LF       L PN V  +S
Sbjct: 289 GDARAVFDESISSSYHHQDLVSWTAMIVGYTQRGYPGLAIELFKNEKWAGLLPNSVTISS 348

Query: 528 ILSAC 542
           +LSAC
Sbjct: 349 LLSAC 353



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 3/188 (1%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           ++ +S  L+ +Y     +  A  +FD++ ++D+ ++  MI  Y  N +    +  +R MR
Sbjct: 68  ELLLSTKLLSLYGSFGVLHRARTLFDLLPSRDLYSFKVMIRTYFLNDHHSSVVSVYRLMR 127

Query: 186 YYF---AIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCG 356
                   D V    VL +CA    L        + T+   L  +  + T+L++ Y+KCG
Sbjct: 128 LSLHPTPHDHVLFSVVLKSCAETRDLLQAALTHCHLTKS--LPPDSFLLTSLVDAYAKCG 185

Query: 357 DFGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILS 536
               ARR F+E+  ++ V+W++M+  Y  +      L LF  M +  +  NE    S++S
Sbjct: 186 QLPHARRAFEEIPHRDVVSWTSMIVAYVQNECAREGLTLFNRMQEAFVHGNEFTMGSVVS 245

Query: 537 ACSHTGMI 560
           AC+  G +
Sbjct: 246 ACTSLGWL 253


>ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Glycine max]
          Length = 699

 Score =  233 bits (593), Expect = 3e-59
 Identities = 115/188 (61%), Positives = 146/188 (77%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   EDVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRM 182
           +D  V NALV MYAKC  + +A  VF+ +L KDV++WNS+I+G+ Q+G AYEAL  FRRM
Sbjct: 371 DDHPVRNALVDMYAKCGVVSDARCVFEAMLEKDVVSWNSIISGFVQSGEAYEALNLFRRM 430

Query: 183 RY-YFAIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGD 359
               F+ DAVT+V +LSACASLG L +GC++   A ++GL+ S+I+VGTALLN Y+KCGD
Sbjct: 431 GLELFSPDAVTVVGILSACASLGMLHLGCSVHGLALKDGLVVSSIYVGTALLNFYAKCGD 490

Query: 360 FGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSA 539
              AR VFD MGEKN VTW AM+ GYGM GD NGSL LF +ML+E +EPNEVVFT+IL+A
Sbjct: 491 ARAARMVFDSMGEKNAVTWGAMIGGYGMQGDGNGSLTLFRDMLEELVEPNEVVFTTILAA 550

Query: 540 CSHTGMIG 563
           CSH+GM+G
Sbjct: 551 CSHSGMVG 558



 Score =  114 bits (286), Expect = 1e-23
 Identities = 73/189 (38%), Positives = 104/189 (55%), Gaps = 6/189 (3%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMIL-NKDVIAWNSMITGYSQNGYAYEALIFFRRM 182
           D  V   LV  YAK  R+ EA+  FD I  N DV++W SMI  Y QN  A E L  F RM
Sbjct: 166 DSFVLTCLVDAYAKFARVDEATRAFDEIHENDDVVSWTSMIVAYVQNDCAREGLTLFNRM 225

Query: 183 RYYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGD 359
           R  F   +  T+ S++SAC  L  L  G  +  +  + G+   N ++ T+LLNMY KCG+
Sbjct: 226 REAFVDGNEFTVGSLVSACTKLNWLHQGKWVHGFVIKNGICV-NSYLTTSLLNMYVKCGN 284

Query: 360 FGCARRVFDEMG----EKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTS 527
              A +VFDE      +++ V+W+AM+ GY   G  + +L LF +     + PN V  +S
Sbjct: 285 IQDACKVFDESSSSSYDRDLVSWTAMIVGYSQRGYPHLALELFKDKKWSGILPNSVTVSS 344

Query: 528 ILSACSHTG 554
           +LS+C+  G
Sbjct: 345 LLSSCAQLG 353



 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 4/184 (2%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D+ +S  L+ +YA   ++  A  +F+ +  +D+  +  MI  Y  N      +  +R MR
Sbjct: 64  DLLLSTKLLSLYASFGQLRHARKIFNHLPTRDLYCFKVMIRAYFLNDTPSGVVSLYRLMR 123

Query: 186 YYF---AIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCG 356
                   D V    V  +CA     +       +  +   L S+  V T L++ Y+K  
Sbjct: 124 LSLHPTPHDYVLFSIVFKSCAESRDFQTLTITHCHFVKS--LPSDSFVLTCLVDAYAKFA 181

Query: 357 DFGCARRVFDEMGEKNK-VTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSIL 533
               A R FDE+ E +  V+W++M+  Y  +      L LF  M +  ++ NE    S++
Sbjct: 182 RVDEATRAFDEIHENDDVVSWTSMIVAYVQNDCAREGLTLFNRMREAFVDGNEFTVGSLV 241

Query: 534 SACS 545
           SAC+
Sbjct: 242 SACT 245


>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
            [Cucumis sativus]
          Length = 1830

 Score =  231 bits (588), Expect = 1e-58
 Identities = 111/181 (61%), Positives = 143/181 (79%), Gaps = 1/181 (0%)
 Frame = +3

Query: 21   NALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMRYY-FA 197
            NAL+ MYAKCH I +A  +F  +L KDVI WNSMI+GY+QNG AY+AL  F +MR Y  A
Sbjct: 1433 NALIDMYAKCHTISDAYAIFHGVLEKDVITWNSMISGYAQNGSAYDALRLFNQMRSYSLA 1492

Query: 198  IDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDFGCARR 377
             DA+TLVS LSA A+LGA++VG +L AY+ + GL SSN+++GTALLN Y+KCGD   AR 
Sbjct: 1493 PDAITLVSTLSASATLGAIQVGSSLHAYSVKGGLFSSNLYIGTALLNFYAKCGDARSARM 1552

Query: 378  VFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSACSHTGM 557
            VFD MG KN +TWSAM+ GYG+ GD +GSL +F  MLKE+L+PNEV+FT++LSACS++GM
Sbjct: 1553 VFDSMGVKNIITWSAMIGGYGVQGDGSGSLSIFSNMLKEDLKPNEVIFTTVLSACSYSGM 1612

Query: 558  I 560
            +
Sbjct: 1613 V 1613



 Score =  107 bits (266), Expect = 3e-21
 Identities = 61/172 (35%), Positives = 94/172 (54%), Gaps = 1/172 (0%)
 Frame = +3

Query: 6    DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
            D  V   L+ MY KC ++  +S VF+ I++K+V++W SMI GY QN  A E L+ F RMR
Sbjct: 1251 DSFVMTGLIDMYGKCGQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMR 1310

Query: 186  -YYFAIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
                  +  TL S+++A   L AL  G  +  YA +  +   +  + T  L+MY KCG  
Sbjct: 1311 DALVESNPFTLGSIINAFTKLRALHQGKWVHGYAIK-NIAELSSFLATTFLDMYVKCGQT 1369

Query: 363  GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVV 518
              AR ++DE+   + V+W+ M+ GY      N  L LF + ++ +L PN  +
Sbjct: 1370 RDARMIYDELPTIDLVSWTVMIVGYTQARQPNDGLRLFADEIRSDLLPNSAL 1421



 Score = 92.0 bits (227), Expect = 9e-17
 Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 1/172 (0%)
 Frame = +3

Query: 27   LVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMRYYFA-ID 203
            LV +Y     +  A  VFD + N D  AW  MI  Y  N    + + F+ RMR  F   D
Sbjct: 1158 LVGVYGALGDVRSARMVFDQMPNPDFYAWKVMIRWYFLNDLFVDVIPFYNRMRMSFRECD 1217

Query: 204  AVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDFGCARRVF 383
             +    +L AC+ L  +  G  +     + G    +  V T L++MY KCG   C+  VF
Sbjct: 1218 NIIFSIILKACSELREIVEGRKVHCQIVKVG--GPDSFVMTGLIDMYGKCGQVECSSAVF 1275

Query: 384  DEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSA 539
            +E+ +KN V+W++M++GY  +      L+LF  M    +E N     SI++A
Sbjct: 1276 EEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDALVESNPFTLGSIINA 1327


>ref|XP_002316102.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550329982|gb|EEF02273.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 665

 Score =  229 bits (585), Expect = 3e-58
 Identities = 116/187 (62%), Positives = 144/187 (77%), Gaps = 1/187 (0%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V+N+LV  YAKC    +A YVF+ I ++DV+AWNS+I+ +SQNG AYEAL  F +MR
Sbjct: 337 DPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMR 396

Query: 186 YYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
               + DAVTLVSVLSACASL AL+VG +  AYA + GLLSSN++VGTALL  Y+KCGD 
Sbjct: 397 MGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDA 456

Query: 363 GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSAC 542
             AR +FD M +K+ VTWSAM+SGYG+ G+  GSL +FG+MLK  L+PNE +FTSILSAC
Sbjct: 457 ESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSAC 516

Query: 543 SHTGMIG 563
           SHTGMIG
Sbjct: 517 SHTGMIG 523



 Score =  119 bits (298), Expect = 5e-25
 Identities = 73/181 (40%), Positives = 104/181 (57%), Gaps = 1/181 (0%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V   LV MYAKC  I  +  VFD  L+++V +W+SMI GY QN  A + L+ F RMR
Sbjct: 136 DSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMR 195

Query: 186 Y-YFAIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
                 + +TL  ++ AC  LGAL  G  L  Y  + G+   +  V TALL++Y+KCG  
Sbjct: 196 EELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLV-TALLDLYAKCGVV 254

Query: 363 GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSAC 542
             AR VFDE+   + V+W+AM+ GY  +G    +L LF +  +  + PN+V   S+ S+C
Sbjct: 255 RDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSC 314

Query: 543 S 545
           S
Sbjct: 315 S 315



 Score = 99.0 bits (245), Expect = 8e-19
 Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 1/186 (0%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D++ S  LV +Y    R+  A  VFD I + D ++W  +I  Y  N    + + F+ RMR
Sbjct: 36  DLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEFRDIVGFYNRMR 95

Query: 186 YYFA-IDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
                 D V    VL AC+       G  +     + G  + +  V T L++MY+KCG+ 
Sbjct: 96  VCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG--NPDSFVFTGLVDMYAKCGEI 153

Query: 363 GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSAC 542
            C+R VFDE  ++N  +WS+M++GY  +      L+LF  M +E +E N++    ++ AC
Sbjct: 154 ECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGILVHAC 213

Query: 543 SHTGMI 560
              G +
Sbjct: 214 KKLGAL 219


>ref|XP_004514248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Cicer arietinum]
          Length = 1334

 Score =  228 bits (582), Expect = 6e-58
 Identities = 115/188 (61%), Positives = 147/188 (78%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   EDVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRM 182
           +  ++ NALV MYAKC    +A YVF+  ++KDV++WNS+I+GY+Q+G AYEAL  F RM
Sbjct: 369 DGTSLRNALVDMYAKCGLSFDARYVFETTVDKDVVSWNSVISGYAQSGSAYEALDLFHRM 428

Query: 183 RYY-FAIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGD 359
           R   F+ DAVT+V VLSACAS+GAL++G +L A+A + GL+S +I+VGTALLN Y+KCG+
Sbjct: 429 RLESFSPDAVTVVGVLSACASVGALQIGSSLHAFAFKYGLVSCSIYVGTALLNFYAKCGE 488

Query: 360 FGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSA 539
              AR VFD MGEKN VTWSAM+ G GM GD  GSL LF +MLKE L PNEVVFT+IL+A
Sbjct: 489 ANLARMVFDTMGEKNAVTWSAMIGGCGMQGDGVGSLALFRDMLKEKLVPNEVVFTTILAA 548

Query: 540 CSHTGMIG 563
           CSH+GM+G
Sbjct: 549 CSHSGMVG 556



 Score =  122 bits (307), Expect = 5e-26
 Identities = 69/188 (36%), Positives = 110/188 (58%), Gaps = 6/188 (3%)
 Frame = +3

Query: 15  VSNALVHMYAKCHRIGEASYVFDMIL-----NKDVIAWNSMITGYSQNGYAYEALIFFRR 179
           ++ +L++MY KC  IG+A YVFD        + D++ W +MI GY+Q GY   AL  F  
Sbjct: 268 LATSLLNMYVKCGDIGDARYVFDEFSISNFDDDDLVFWTAMIVGYTQRGYPQAALELFTD 327

Query: 180 MRYYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCG 356
            ++Y  + ++VTL S+LSACA L  + +G +L     + GL  +++    AL++MY+KCG
Sbjct: 328 KKWYRILPNSVTLASLLSACAQLENIVMGKSLHVLVVKYGLDGTSLR--NALVDMYAKCG 385

Query: 357 DFGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILS 536
               AR VF+   +K+ V+W++++SGY   G    +L LF  M  E+  P+ V    +LS
Sbjct: 386 LSFDARYVFETTVDKDVVSWNSVISGYAQSGSAYEALDLFHRMRLESFSPDAVTVVGVLS 445

Query: 537 ACSHTGMI 560
           AC+  G +
Sbjct: 446 ACASVGAL 453



 Score =  122 bits (305), Expect = 8e-26
 Identities = 74/186 (39%), Positives = 100/186 (53%), Gaps = 6/186 (3%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V  +LV  Y+KC  +  A  VFD I ++ +++W SMI  Y QN  A E L+ F RMR
Sbjct: 164 DSFVLTSLVDAYSKCGELHYARKVFDEIPDRTIVSWTSMIVAYVQNDCAEEGLMLFNRMR 223

Query: 186 YYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
             F   +  T+ S+++AC  LG L  G  +  Y  + G +  N  + T+LLNMY KCGD 
Sbjct: 224 EGFVDGNLFTVGSLVTACTKLGCLHQGKWVHGYVIKNG-IQINSFLATSLLNMYVKCGDI 282

Query: 363 GCARRVFDEMGEKN-----KVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTS 527
           G AR VFDE    N      V W+AM+ GY   G    +L LF +     + PN V   S
Sbjct: 283 GDARYVFDEFSISNFDDDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLAS 342

Query: 528 ILSACS 545
           +LSAC+
Sbjct: 343 LLSACA 348



 Score =  120 bits (300), Expect = 3e-25
 Identities = 69/191 (36%), Positives = 109/191 (57%), Gaps = 8/191 (4%)
 Frame = +3

Query: 12   TVSNALVHMYAKCHRIGEASYVFDMIL---NKDVIAWNSMITGYSQNGYAYEALIFFRRM 182
            +V+  LV ++ K   + ++   F+ I     + V+ WN+MI+ Y QNG   E L  FR M
Sbjct: 975  SVNTVLVFLFGKWGNVEKSREKFEQISAAGKRGVVPWNAMISAYVQNGCPLEGLNLFRAM 1034

Query: 183  --RYYFAIDAVTLVSVLSACASLGALRVGCALQAYAT---REGLLSSNIHVGTALLNMYS 347
                    + +T+VSVLSACA +G L +GC +  Y      +G + SN  + T+L++MYS
Sbjct: 1035 VEEQTSRPNHITMVSVLSACAQIGDLSLGCWVHEYLISIGHKGTIGSNQILATSLIDMYS 1094

Query: 348  KCGDFGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTS 527
            KCG    A+ VF+    K+ V ++AM+ G  ++G+   +L LF +M +  L+PN   F  
Sbjct: 1095 KCGSLDRAKEVFEHAISKDVVLFNAMIMGLAVNGEGEDALRLFYKMTEYGLQPNAGTFLG 1154

Query: 528  ILSACSHTGMI 560
             LSACSH+G++
Sbjct: 1155 ALSACSHSGLL 1165



 Score = 89.0 bits (219), Expect = 8e-16
 Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 15/198 (7%)
 Frame = +3

Query: 6    DVTVSNALVHMYAK-CHRIGEASYVFDMILNKDVIA-WNSMITGYSQNGYAYEAL-IFFR 176
            D  V+N LV +YAK  + +  A  VFD I +K  ++ W S+ITGY+Q+G + E L +F  
Sbjct: 864  DTFVTNGLVAVYAKGFNNLVSARKVFDEIPDKSAVSCWTSLITGYAQSGQSEEVLQVFHA 923

Query: 177  RMRYYFAIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNI--------HVGTAL 332
             +R        T+VSVLSAC+SL   ++      Y   E L+  +I         V T L
Sbjct: 924  MIRQNMCPQNDTMVSVLSACSSLQIPKI--EKWVYILSE-LIDDSISARETWHDSVNTVL 980

Query: 333  LNMYSKCGDFGCARRVFDEM---GEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENL- 500
            + ++ K G+   +R  F+++   G++  V W+AM+S Y  +G     L LF  M++E   
Sbjct: 981  VFLFGKWGNVEKSREKFEQISAAGKRGVVPWNAMISAYVQNGCPLEGLNLFRAMVEEQTS 1040

Query: 501  EPNEVVFTSILSACSHTG 554
             PN +   S+LSAC+  G
Sbjct: 1041 RPNHITMVSVLSACAQIG 1058



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 4/161 (2%)
 Frame = +3

Query: 75   VFDMILNKDVIAWNSMITGYSQNGYAYEALIFFR--RMRYYFAIDAVTLVSVLSACASLG 248
            VF  + N ++  +N++I   ++ G+ +     F   + R  F  D +TL  +L AC    
Sbjct: 786  VFHQLQNPNIFPFNAIIRILAEQGHFFHVFSLFNCLKRRSLFPND-LTLSFLLKACFKSK 844

Query: 249  ALRVGCALQAYATREGLLSSNIHVGTALLNMYSK-CGDFGCARRVFDEMGEKNKVT-WSA 422
                   + A+  + G LS    V   L+ +Y+K   +   AR+VFDE+ +K+ V+ W++
Sbjct: 845  DTHCVEQVHAHILKMGYLSDTF-VTNGLVAVYAKGFNNLVSARKVFDEIPDKSAVSCWTS 903

Query: 423  MMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSACS 545
            +++GY   G     L +F  M+++N+ P      S+LSACS
Sbjct: 904  LITGYAQSGQSEEVLQVFHAMIRQNMCPQNDTMVSVLSACS 944



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 45/180 (25%), Positives = 88/180 (48%), Gaps = 2/180 (1%)
 Frame = +3

Query: 27  LVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFR--RMRYYFAI 200
           L+ +YA    +  A  +F  + + ++ ++  +I  +  N      + F+   R+   F  
Sbjct: 70  LLSLYASFGFLRYARTLFHRLPSHNLYSFKLIIRWHFLNDIHSYVVSFYHLARLTLGFFN 129

Query: 201 DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDFGCARRV 380
           D V    +L A + L  L +   L  +  +    S +  V T+L++ YSKCG+   AR+V
Sbjct: 130 DLVVFSILLKASSHLRDLVLTTRLHCHILKAN--SPDSFVLTSLVDAYSKCGELHYARKV 187

Query: 381 FDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSACSHTGMI 560
           FDE+ ++  V+W++M+  Y  +      L+LF  M +  ++ N     S+++AC+  G +
Sbjct: 188 FDEIPDRTIVSWTSMIVAYVQNDCAEEGLMLFNRMREGFVDGNLFTVGSLVTACTKLGCL 247


>ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355508818|gb|AES89960.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 871

 Score =  224 bits (572), Expect = 9e-57
 Identities = 113/187 (60%), Positives = 145/187 (77%), Gaps = 1/187 (0%)
 Frame = +3

Query: 3   EDVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRM 182
           +D ++ N+LV MYAKC  I +A YVF   ++KDV++WNS+I+GY+Q+G AYEAL  F RM
Sbjct: 374 DDTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRM 433

Query: 183 RYY-FAIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGD 359
           R   F  DAVT+V VLSACAS+GA ++G +L  +A + GL+SS+I+VGTALLN Y+KCGD
Sbjct: 434 RMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGD 493

Query: 360 FGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSA 539
              AR VFD MGEKN VTW+AM+ G GM GD  GSL LF +MLKE L PNEVVFT++L+A
Sbjct: 494 ATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAA 553

Query: 540 CSHTGMI 560
           CSH+GM+
Sbjct: 554 CSHSGMV 560



 Score =  126 bits (317), Expect = 3e-27
 Identities = 76/187 (40%), Positives = 104/187 (55%), Gaps = 7/187 (3%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V  +LV  Y+KC ++ +A  VFD I ++ V++W SMI  Y QN  A E L+ F RMR
Sbjct: 168 DSFVLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMR 227

Query: 186 YYFAIDAV-TLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
             F    V T+ S+++AC  LG L  G  +  Y  + G +  N ++ T+LLNMY KCGD 
Sbjct: 228 EGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNG-IEINSYLATSLLNMYVKCGDI 286

Query: 363 GCARRVFDEM------GEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFT 524
           G AR VFDE       G  + V W+AM+ GY   G    +L LF +     + PN V   
Sbjct: 287 GDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLA 346

Query: 525 SILSACS 545
           S+LSAC+
Sbjct: 347 SLLSACA 353



 Score =  114 bits (284), Expect = 2e-23
 Identities = 66/187 (35%), Positives = 104/187 (55%), Gaps = 7/187 (3%)
 Frame = +3

Query: 15  VSNALVHMYAKCHRIGEASYVFDMIL------NKDVIAWNSMITGYSQNGYAYEALIFFR 176
           ++ +L++MY KC  IG+A  VFD           D++ W +MI GY+Q GY   AL  F 
Sbjct: 272 LATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFT 331

Query: 177 RMRYYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKC 353
             ++Y  + ++VTL S+LSACA L  + +G  L     + GL  +++    +L++MY+KC
Sbjct: 332 DKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLDDTSLR--NSLVDMYAKC 389

Query: 354 GDFGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSIL 533
           G    A  VF    +K+ V+W++++SGY   G    +L LF  M  E+  P+ V    +L
Sbjct: 390 GLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVL 449

Query: 534 SACSHTG 554
           SAC+  G
Sbjct: 450 SACASVG 456



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 27/79 (34%), Positives = 48/79 (60%)
 Frame = +3

Query: 324 TALLNMYSKCGDFGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLE 503
           T+L++ YSKCG    AR+VFDE+ +++ V+W++M+  Y  +      L+LF  M +  L+
Sbjct: 173 TSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLD 232

Query: 504 PNEVVFTSILSACSHTGMI 560
            N     S+++AC+  G +
Sbjct: 233 GNVFTVGSLVTACTKLGCL 251


>ref|XP_006292336.1| hypothetical protein CARUB_v10018547mg [Capsella rubella]
           gi|482561043|gb|EOA25234.1| hypothetical protein
           CARUB_v10018547mg [Capsella rubella]
          Length = 701

 Score =  221 bits (562), Expect = 1e-55
 Identities = 110/187 (58%), Positives = 140/187 (74%), Gaps = 2/187 (1%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V+NALVHMYAKC++  +A YVF+M   KD++AWNS+I+G+SQNG  YEAL  FRRM 
Sbjct: 381 DTNVANALVHMYAKCYQNRDARYVFEMESEKDIVAWNSIISGFSQNGSIYEALFLFRRMN 440

Query: 186 YYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLL-SSNIHVGTALLNMYSKCGD 359
                 +AVT+ S+ SACASLG+L VG +L AY+ + G L SS++H+GTALL+ Y+KCGD
Sbjct: 441 SESVTPNAVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHIGTALLDFYAKCGD 500

Query: 360 FGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSA 539
              AR +F+ + EKN +TWSAM+ GYG  GD  GSL LF EMLK+  +PNE  FTSILSA
Sbjct: 501 AESARLIFNTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSILSA 560

Query: 540 CSHTGMI 560
           CSHTGM+
Sbjct: 561 CSHTGMV 567



 Score =  123 bits (308), Expect = 4e-26
 Identities = 68/180 (37%), Positives = 104/180 (57%), Gaps = 1/180 (0%)
 Frame = +3

Query: 24  ALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMRYY-FAI 200
           +L+ MY KC  I  A  VFD   + D++ W +MI GY+ N  A EAL  F++M+      
Sbjct: 287 SLLDMYVKCGDISNARRVFDEPSHVDLVMWTAMIVGYTHNNNANEALSLFQKMKGVGMKP 346

Query: 201 DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDFGCARRV 380
           + VT+ SVLS C  +G L +G A+   + + GL  +N  V  AL++MY+KC     AR V
Sbjct: 347 NCVTIASVLSGCGLIGNLELGRAVHGLSIKVGLWDTN--VANALVHMYAKCYQNRDARYV 404

Query: 381 FDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSACSHTGMI 560
           F+   EK+ V W++++SG+  +G +  +L LF  M  E++ PN V   S+ SAC+  G +
Sbjct: 405 FEMESEKDIVAWNSIISGFSQNGSIYEALFLFRRMNSESVTPNAVTVASLFSACASLGSL 464



 Score =  122 bits (305), Expect = 8e-26
 Identities = 75/187 (40%), Positives = 103/187 (55%), Gaps = 1/187 (0%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V   L+ MYAKC  I  A  VF+ I  ++V+ W SMI GY +N    EAL+ F RMR
Sbjct: 180 DNVVLTGLLDMYAKCGEIKSAYKVFEDITLRNVVCWTSMIAGYVKNDLHEEALVMFNRMR 239

Query: 186 YYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
               + +  T  +++ AC  L AL  G        + G+  S+  V T+LL+MY KCGD 
Sbjct: 240 ENTVLGNEYTYGTLVMACTKLSALHQGKWFHGCLIKSGIELSSCLV-TSLLDMYVKCGDI 298

Query: 363 GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSAC 542
             ARRVFDE    + V W+AM+ GY  + + N +L LF +M    ++PN V   S+LS C
Sbjct: 299 SNARRVFDEPSHVDLVMWTAMIVGYTHNNNANEALSLFQKMKGVGMKPNCVTIASVLSGC 358

Query: 543 SHTGMIG 563
              G+IG
Sbjct: 359 ---GLIG 362



 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 1/181 (0%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRM- 182
           D+ ++  +V MY       +A  +FD I   D  +W  M+  Y  N  + E + F+  M 
Sbjct: 80  DILIATKIVSMYGSFGYTKDARLMFDQIPEPDFYSWKVMLRCYCLNNESLEIINFYDSMI 139

Query: 183 RYYFAIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
            + F  D +     L AC  L  L  G  +     +  + S +  V T LL+MY+KCG+ 
Sbjct: 140 EHGFRYDDIVFSKALKACTELQDLESGKKIHCQIVK--VPSFDNVVLTGLLDMYAKCGEI 197

Query: 363 GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSAC 542
             A +VF+++  +N V W++M++GY  +     +L++F  M +  +  NE  + +++ AC
Sbjct: 198 KSAYKVFEDITLRNVVCWTSMIAGYVKNDLHEEALVMFNRMRENTVLGNEYTYGTLVMAC 257

Query: 543 S 545
           +
Sbjct: 258 T 258


>ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297814638|ref|XP_002875202.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297321039|gb|EFH51460.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297321040|gb|EFH51461.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 708

 Score =  218 bits (555), Expect = 9e-55
 Identities = 107/187 (57%), Positives = 139/187 (74%), Gaps = 2/187 (1%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V+NALVHMYAKC++  +A YVF+M   KD++AWNS+I+G+SQNG  +EAL  F RM 
Sbjct: 388 DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 447

Query: 186 YYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLL-SSNIHVGTALLNMYSKCGD 359
               + + VT+ S+ SACASLG+L +G +L AY+ + G L SS++HVGTALL+ Y+KCGD
Sbjct: 448 TESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 507

Query: 360 FGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSA 539
              AR +FD + EKN +TWSAM+ GYG  GD  GSL LF EMLK+  +PNE  FTS+LSA
Sbjct: 508 AESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSA 567

Query: 540 CSHTGMI 560
           CSHTGM+
Sbjct: 568 CSHTGMV 574



 Score =  119 bits (299), Expect = 4e-25
 Identities = 72/184 (39%), Positives = 100/184 (54%), Gaps = 1/184 (0%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V   L+ MYAKC  I  +  VF+ I  ++V+ W SMI GY +N    E L+ F RMR
Sbjct: 187 DNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMR 246

Query: 186 YYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
               + +  T  +++ AC  L AL  G        + G+  S+  V T+LL+MY KCGD 
Sbjct: 247 ENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLV-TSLLDMYVKCGDI 305

Query: 363 GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSAC 542
             ARRVF+E    + V W+AM+ GY  +G VN +L LF +M    ++PN V   S+LS C
Sbjct: 306 SNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGC 365

Query: 543 SHTG 554
              G
Sbjct: 366 GLVG 369



 Score =  117 bits (294), Expect = 2e-24
 Identities = 64/180 (35%), Positives = 104/180 (57%), Gaps = 1/180 (0%)
 Frame = +3

Query: 24  ALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMRYY-FAI 200
           +L+ MY KC  I  A  VF+   + D++ W +MI GY+ NG   EAL  F++M       
Sbjct: 294 SLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKP 353

Query: 201 DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDFGCARRV 380
           + VT+ SVLS C  +G L +G ++   + + G+  +N  V  AL++MY+KC     A+ V
Sbjct: 354 NCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWDTN--VANALVHMYAKCYQNRDAKYV 411

Query: 381 FDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSACSHTGMI 560
           F+   EK+ V W++++SG+  +G ++ +L LF  M  E++ PN V   S+ SAC+  G +
Sbjct: 412 FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSL 471



 Score = 65.5 bits (158), Expect = 9e-09
 Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
 Frame = +3

Query: 9    VTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRM-R 185
            V V  AL+  YAKC     A  +FD I  K+ I W++MI GY + G    +L  F  M +
Sbjct: 492  VHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLK 551

Query: 186  YYFAIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDFG 365
                 +  T  SVLSAC+  G +  G    +   ++   + +    T +++M ++ G+  
Sbjct: 552  KQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELE 611

Query: 366  CARRVFDEMGEKNKV-TWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILS 536
             A  + ++M  +  V  + A + G GMH   +   I+  +ML  +L P++  +  ++S
Sbjct: 612  QALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKML--DLHPDDASYYVLVS 667


>ref|XP_006395709.1| hypothetical protein EUTSA_v10005367mg, partial [Eutrema
           salsugineum] gi|557092348|gb|ESQ32995.1| hypothetical
           protein EUTSA_v10005367mg, partial [Eutrema salsugineum]
          Length = 667

 Score =  217 bits (553), Expect = 1e-54
 Identities = 108/187 (57%), Positives = 139/187 (74%), Gaps = 2/187 (1%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V+N+LVHMYAKC++  +A YVF+M   KD++AWNS+I+G+SQNG  YEAL  F RM+
Sbjct: 381 DTNVANSLVHMYAKCYQNRDARYVFEMESEKDLVAWNSIISGFSQNGSVYEALFLFHRMK 440

Query: 186 YYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLL-SSNIHVGTALLNMYSKCGD 359
                 + VT+ S+ SACASLG+L +G +L AY+ + G L SS++HVGTALL+ Y+KCGD
Sbjct: 441 SESVTPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 500

Query: 360 FGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSA 539
              AR VFD + EKN +TWSAM+ GYG  GD  GSL LF EMLK+  +PNE  FTSIL+A
Sbjct: 501 AESARIVFDTIEEKNTITWSAMIEGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSILTA 560

Query: 540 CSHTGMI 560
           CSHTGM+
Sbjct: 561 CSHTGMV 567



 Score =  117 bits (292), Expect = 3e-24
 Identities = 72/187 (38%), Positives = 101/187 (54%), Gaps = 1/187 (0%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V   L+ MYAKC  I  +  VFD I  ++V+ W SMI GY +N    + L  F  MR
Sbjct: 181 DSIVLTGLLDMYAKCGEIKSSYRVFDCIPLRNVVCWTSMIAGYVKNDLHEQGLDLFNLMR 240

Query: 186 YYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
                 + VT  ++++AC  LGAL  G    +   + G+  S+  V T+LL+MY KCGD 
Sbjct: 241 ENSVSGNEVTYGTLVTACTKLGALHQGKWFHSCLIKSGIELSSCLV-TSLLDMYVKCGDI 299

Query: 363 GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSAC 542
             ARRVF+E    + V W+AM+ GY  +G  N +L LF +M    ++PN V   S+LS C
Sbjct: 300 SNARRVFNEHSHVDLVMWTAMIVGYTHNGRANEALSLFQKMKGVGIKPNCVTIASVLSGC 359

Query: 543 SHTGMIG 563
                +G
Sbjct: 360 GGNPELG 366


>ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g03380, mitochondrial; Flags: Precursor
           gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis
           thaliana] gi|330250600|gb|AEC05694.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  214 bits (546), Expect = 9e-54
 Identities = 108/187 (57%), Positives = 137/187 (73%), Gaps = 2/187 (1%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V+NALVHMYAKC++  +A YVF+M   KD++AWNS+I+G+SQNG  +EAL  F RM 
Sbjct: 376 DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 435

Query: 186 YYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLL-SSNIHVGTALLNMYSKCGD 359
                 + VT+ S+ SACASLG+L VG +L AY+ + G L SS++HVGTALL+ Y+KCGD
Sbjct: 436 SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 495

Query: 360 FGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSA 539
              AR +FD + EKN +TWSAM+ GYG  GD  GSL LF EMLK+  +PNE  FTSILSA
Sbjct: 496 PQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSA 555

Query: 540 CSHTGMI 560
           C HTGM+
Sbjct: 556 CGHTGMV 562



 Score =  121 bits (304), Expect = 1e-25
 Identities = 72/180 (40%), Positives = 99/180 (55%), Gaps = 1/180 (0%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V   L+ MYAKC  I  A  VF+ I  ++V+ W SMI GY +N    E L+ F RMR
Sbjct: 175 DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMR 234

Query: 186 YYFAI-DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
               + +  T  +++ AC  L AL  G        + G+  S+  V T+LL+MY KCGD 
Sbjct: 235 ENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV-TSLLDMYVKCGDI 293

Query: 363 GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSAC 542
             ARRVF+E    + V W+AM+ GY  +G VN +L LF +M    ++PN V   S+LS C
Sbjct: 294 SNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC 353



 Score =  117 bits (292), Expect = 3e-24
 Identities = 63/180 (35%), Positives = 104/180 (57%), Gaps = 1/180 (0%)
 Frame = +3

Query: 24  ALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR-YYFAI 200
           +L+ MY KC  I  A  VF+   + D++ W +MI GY+ NG   EAL  F++M+      
Sbjct: 282 SLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKP 341

Query: 201 DAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDFGCARRV 380
           + VT+ SVLS C  +  L +G ++   + + G+  +N  V  AL++MY+KC     A+ V
Sbjct: 342 NCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN--VANALVHMYAKCYQNRDAKYV 399

Query: 381 FDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSACSHTGMI 560
           F+   EK+ V W++++SG+  +G ++ +L LF  M  E++ PN V   S+ SAC+  G +
Sbjct: 400 FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSL 459



 Score = 85.9 bits (211), Expect = 7e-15
 Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEAL-IFFRRM 182
           D++++  LV +Y       +A  VFD I   D   W  M+  Y  N  + E + ++   M
Sbjct: 75  DISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLM 134

Query: 183 RYYFAIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
           ++ F  D +     L AC  L  L  G  +     +  + S +  V T LL+MY+KCG+ 
Sbjct: 135 KHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVK--VPSFDNVVLTGLLDMYAKCGEI 192

Query: 363 GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSAC 542
             A +VF+++  +N V W++M++GY  +      L+LF  M + N+  NE  + +++ AC
Sbjct: 193 KSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMAC 252

Query: 543 S 545
           +
Sbjct: 253 T 253


>ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
           gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza
           sativa Japonica Group] gi|125596287|gb|EAZ36067.1|
           hypothetical protein OsJ_20377 [Oryza sativa Japonica
           Group]
          Length = 673

 Score =  214 bits (545), Expect = 1e-53
 Identities = 108/187 (57%), Positives = 135/187 (72%), Gaps = 1/187 (0%)
 Frame = +3

Query: 3   EDVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRM 182
           E   V NALV MYAKC  + EA+ +F  IL KDV+AWNSM+ GYS+NG A E+L+ F RM
Sbjct: 357 ESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRM 416

Query: 183 RYY-FAIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGD 359
           R    + DA+++V+ LSAC  L  L +G     YA +   +S NI+V TALLN+YSKC D
Sbjct: 417 RMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMS-NIYVNTALLNLYSKCAD 475

Query: 360 FGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSA 539
              A+RVF++M ++N VTWSAM+ GYGM GD  GS+ LF EMLKEN+ PNEVVFTSILSA
Sbjct: 476 LPSAQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSA 535

Query: 540 CSHTGMI 560
           CSHTGM+
Sbjct: 536 CSHTGMV 542



 Score =  113 bits (283), Expect = 3e-23
 Identities = 70/179 (39%), Positives = 100/179 (55%), Gaps = 1/179 (0%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V N+LV MYAK   +  A  VFD +  ++V++W SM++G  QNG A E L+ F  MR
Sbjct: 156 DGFVMNSLVDMYAKAGDLENARKVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMR 215

Query: 186 Y-YFAIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDF 362
                    T+VSVL+ACA LG L  G  +     + G LS+N  +  +LL+MY+KC   
Sbjct: 216 QDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYG-LSTNSFISASLLDMYAKCEKV 274

Query: 363 GCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSA 539
             ARRVFDE+   + V W+AM+ GY  +     +L LF      ++ PN V   +++SA
Sbjct: 275 EDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISA 333



 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 3/179 (1%)
 Frame = +3

Query: 27  LVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMRYYFAIDA 206
           L+  YA    +  A  V D     D  A+  M+      G   +A+   R MR      A
Sbjct: 61  LLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAA 120

Query: 207 ---VTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDFGCARR 377
              V L   L AC      R G  L     + G   ++  V  +L++MY+K GD   AR+
Sbjct: 121 QADVVLSLALKACVRSADFRYGRRLHCDVVKAG--GADGFVMNSLVDMYAKAGDLENARK 178

Query: 378 VFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSACSHTG 554
           VFD + E+N V+W++M+SG   +G     L+LF EM ++N+ P+E    S+L+AC+  G
Sbjct: 179 VFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLG 237


>ref|XP_006656717.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Oryza brachyantha]
          Length = 612

 Score =  206 bits (525), Expect = 3e-51
 Identities = 100/187 (53%), Positives = 137/187 (73%), Gaps = 1/187 (0%)
 Frame = +3

Query: 3   EDVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRM 182
           E   V NALV MYAKC  + +A+ +F+ IL KDV+AWNSM+ GYS+NG A E+L+ F +M
Sbjct: 296 ESAMVRNALVDMYAKCQALPDANSIFERILIKDVVAWNSMMAGYSENGMANESLVLFNQM 355

Query: 183 RYY-FAIDAVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGD 359
           R    + DA+++V+ +SAC  L  L VG +   Y  +   +S +I+V TALLN+Y+KC D
Sbjct: 356 RMQGLSPDAISVVNAISACVCLADLHVGKSFHTYTVKYAFMS-DIYVNTALLNLYNKCAD 414

Query: 360 FGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSA 539
              A+R+F++M ++N VTWSAM+ GYGM GD+ GS+ +F EMLK+N+ PNEVVFTSILSA
Sbjct: 415 LLSAQRIFNDMTDRNSVTWSAMIGGYGMQGDLAGSIGIFNEMLKDNVHPNEVVFTSILSA 474

Query: 540 CSHTGMI 560
           CSHTGM+
Sbjct: 475 CSHTGMV 481



 Score =  106 bits (264), Expect = 5e-21
 Identities = 67/180 (37%), Positives = 98/180 (54%), Gaps = 2/180 (1%)
 Frame = +3

Query: 6   DVTVSNALVHMYAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMR 185
           D  V N LV MYAK   +  A  VFD + +++V++W SM++G  QNG+A E L+ F  MR
Sbjct: 95  DSFVMNCLVDMYAKAGDLETARKVFDRVPDRNVVSWTSMLSGSIQNGFAEEGLVLFNEMR 154

Query: 186 YYFAID--AVTLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGD 359
              ++D    T+ SVLSACA L  L  G  +     + G  S+N  V  +LL+MY+KC  
Sbjct: 155 -KDSVDPSEYTMASVLSACAMLAGLHQGRWIHGSVIKHG-FSANSFVSASLLDMYAKCEK 212

Query: 360 FGCARRVFDEMGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSA 539
              ARRVFDE+   + V W+AM+  Y  +     +L LF      ++ P      +++SA
Sbjct: 213 VEDARRVFDELESVDLVLWTAMIVRYTQNKCPLDALQLFLHKKFASIVPGSFTIPAVISA 272



 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 3/172 (1%)
 Frame = +3

Query: 39  YAKCHRIGEASYVFDMILNKDVIAWNSMITGYSQNGYAYEALIFFRRMRYYFAIDA---V 209
           YA    +  A  VF+     D  A+  M+      G   +A+     M+      A   V
Sbjct: 4   YAALGDLASARGVFEGTPRPDAYAYRVMLGWLIHAGSHADAVALHGDMQRRGPAAAQADV 63

Query: 210 TLVSVLSACASLGALRVGCALQAYATREGLLSSNIHVGTALLNMYSKCGDFGCARRVFDE 389
            L   L AC        G  L       G   ++  V   L++MY+K GD   AR+VFD 
Sbjct: 64  VLSLALKACVRSADFGYGRRLHCTVVTAG--GADSFVMNCLVDMYAKAGDLETARKVFDR 121

Query: 390 MGEKNKVTWSAMMSGYGMHGDVNGSLILFGEMLKENLEPNEVVFTSILSACS 545
           + ++N V+W++M+SG   +G     L+LF EM K++++P+E    S+LSAC+
Sbjct: 122 VPDRNVVSWTSMLSGSIQNGFAEEGLVLFNEMRKDSVDPSEYTMASVLSACA 173