BLASTX nr result

ID: Akebia25_contig00055756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00055756
         (245 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A...    55   8e-06
ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A...    55   8e-06

>ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 450

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 23/71 (32%), Positives = 36/71 (50%)
 Frame = -2

Query: 238 ISWVFPSSTLSFNQSWDPNSFTGRKKSRWTLLPIAIC*GVWKERNRRIFSGVERSHYDMF 59
           ISW  P        SW+      + ++RW ++P +I   +WKERN R F G+E S  D+ 
Sbjct: 362 ISWTMPRRVTEALYSWEEAGALAKDRTRWRIIPASIWWAIWKERNSRCFEGIENSVQDVK 421

Query: 58  FVNSWVVIYWC 26
                ++ +WC
Sbjct: 422 LNCILLLCFWC 432


>ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 556

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 23/71 (32%), Positives = 36/71 (50%)
 Frame = -2

Query: 238 ISWVFPSSTLSFNQSWDPNSFTGRKKSRWTLLPIAIC*GVWKERNRRIFSGVERSHYDMF 59
           ISW  P        SW+      + ++RW ++P +I   +WKERN R F G+E S  D+ 
Sbjct: 468 ISWTMPRRVTEALYSWEEAGALAKDRTRWRIIPASIWWAIWKERNSRCFEGIENSVQDVK 527

Query: 58  FVNSWVVIYWC 26
                ++ +WC
Sbjct: 528 LNCILLLCFWC 538


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