BLASTX nr result
ID: Akebia25_contig00055669
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00055669
(494 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A... 75 9e-12
ref|NP_197389.1| RNA-directed DNA polymerase (reverse transcript... 74 2e-11
ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204... 73 4e-11
ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, part... 72 6e-11
ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein A... 71 1e-10
ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein A... 70 2e-10
ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A... 70 2e-10
ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein A... 70 4e-10
gb|ABD28730.1| Ribonuclease H [Medicago truncatula] 67 2e-09
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA... 67 2e-09
ref|NP_174632.1| RNA-directed DNA polymerase (reverse transcript... 66 4e-09
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica... 66 4e-09
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678... 66 6e-09
ref|XP_006492047.1| PREDICTED: uncharacterized protein LOC102609... 65 1e-08
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript... 65 1e-08
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 64 2e-08
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 63 4e-08
ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein A... 63 5e-08
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 63 5e-08
gb|ABA94478.1| retrotransposon protein, putative, unclassified [... 62 8e-08
>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 872
Score = 75.1 bits (183), Expect = 9e-12
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Frame = -1
Query: 494 VVSDFADPNGWIIRGHDDERDQEICRKVQNHPLPW-PNEVDKVVRTLMSNGKFSFNSAWE 318
+VSD+ D W++ +C + P+ P+ DK++ S G+ + A+
Sbjct: 457 LVSDYIDNGSWVLPPLLQLNLSAVCNLICQVPISINPSMEDKLIWQASSTGELTAKQAFL 516
Query: 317 STRRMDTMVAWEKVTWNKYRIPRHSLIAWLAVNRKLLIAENLRKRGMVIILRWYLCCQDI 138
++ +V W K W+K+ +PR SL AW + ++ L++RG+ ++ R C
Sbjct: 517 FLQQASPVVPWGKPLWSKFILPRMSLHAWKVMRGTVISYHLLQRRGVALVSRCEFCGNST 576
Query: 137 EDNDHVFFKCTFSCSIW 87
E DH+F C+F+ S+W
Sbjct: 577 ESLDHIFLHCSFAASVW 593
>ref|NP_197389.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
gi|332005241|gb|AED92624.1| RNA-directed DNA polymerase
(reverse transcriptase)-related family protein
[Arabidopsis thaliana]
Length = 295
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/85 (42%), Positives = 45/85 (52%)
Frame = -1
Query: 341 FSFNSAWESTRRMDTMVAWEKVTWNKYRIPRHSLIAWLAVNRKLLIAENLRKRGMVIILR 162
FS WE R V W KV W K IPR SLI W++ +L + LR GM I
Sbjct: 109 FSSRDTWEQIRVHSPTVPWAKVVWFKEYIPRFSLITWMSFLERLPTRDRLRGWGMNIPSS 168
Query: 161 WYLCCQDIEDNDHVFFKCTFSCSIW 87
W LC E + H+FF+C+FS +IW
Sbjct: 169 WVLCSNGDETHAHLFFECSFSLAIW 193
>ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204314 [Cucumis sativus]
Length = 282
Score = 73.2 bits (178), Expect = 4e-11
Identities = 38/105 (36%), Positives = 51/105 (48%)
Frame = -1
Query: 389 PNEVDKVVRTLMSNGKFSFNSAWESTRRMDTMVAWEKVTWNKYRIPRHSLIAWLAVNRKL 210
P+ D+ V S+ FS SAWE+ R + V W + W IP+HS AWLA+ +L
Sbjct: 92 PSVEDRWVWVPGSHDSFSITSAWETIRPHSSRVGWSGLLWGGGNIPKHSFCAWLAIRDRL 151
Query: 209 LIAENLRKRGMVIILRWYLCCQDIEDNDHVFFKCTFSCSIWLEVL 75
L + I L LC + E DH+FF C F IW +L
Sbjct: 152 GTRGRLSRWDRSIPLSCLLCGGNYESRDHLFFSCHFGWEIWSRIL 196
>ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, partial [Capsella rubella]
gi|482569649|gb|EOA33837.1| hypothetical protein
CARUB_v10021318mg, partial [Capsella rubella]
Length = 290
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/93 (34%), Positives = 46/93 (49%)
Frame = -1
Query: 347 GKFSFNSAWESTRRMDTMVAWEKVTWNKYRIPRHSLIAWLAVNRKLLIAENLRKRGMVII 168
G FS + W ST +V W K W K RIP+H+ I+W+ + +L + LR GM +
Sbjct: 93 GVFSTSKTWISTHPAGPLVPWFKSVWFKERIPKHAFISWVVIRNRLTTRDRLRGWGMNVP 152
Query: 167 LRWYLCCQDIEDNDHVFFKCTFSCSIWLEVLRH 69
LC E H+FF+C +S +W H
Sbjct: 153 SECLLCTSSAESRLHLFFECAYSHEVWSSFFTH 185
>ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
sativus]
Length = 288
Score = 71.2 bits (173), Expect = 1e-10
Identities = 38/107 (35%), Positives = 52/107 (48%)
Frame = -1
Query: 395 PWPNEVDKVVRTLMSNGKFSFNSAWESTRRMDTMVAWEKVTWNKYRIPRHSLIAWLAVNR 216
P P+ D VR S+ FS SA E+ R + V W + W IP+HS WLA+
Sbjct: 165 PSPSVEDMWVRVPGSHESFSIVSACEAIRPHSSRVGWSGLLWGGGNIPKHSFYTWLAIKD 224
Query: 215 KLLIAENLRKRGMVIILRWYLCCQDIEDNDHVFFKCTFSCSIWLEVL 75
+L + L + I L LC ++ E DH+FF C F IW +L
Sbjct: 225 RLGTRDRLSRWDSSIPLSCILCGRNYESRDHLFFPCPFGWEIWSRIL 271
>ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 409
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/116 (31%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Frame = -1
Query: 428 EICRKVQNHPLPW-PNEVDKVVRTLMSNGKFSFNSAWESTRRMDTMVAWEKVTWNKYRIP 252
+IC+ + + P+ P+ DK++ S+G+ A++ R + W K+ W+K+ IP
Sbjct: 16 DICKLINDVPISIVPDMSDKLIWVPSSSGELLAKEAFQFMRPRLPSLDWSKLIWSKFIIP 75
Query: 251 RHSLIAWLAVNRKLLIAENLRKRGMVIILRWYLCCQDIEDN-DHVFFKCTFSCSIW 87
R SL +W + ++L + L++RG+V+ R LC +D E + H+F C+F S+W
Sbjct: 76 RISLHSWKVLRGRVLSEDLLQRRGIVLASRCVLCGRDCESSFPHIFLTCSFVASLW 131
>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 751
Score = 70.5 bits (171), Expect = 2e-10
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Frame = -1
Query: 491 VSDFADPNGWIIRGHDDERDQEICRKVQNHPLPWPNEVDKVVRTLMSNGKFSFNSAWEST 312
V+DF W + H + +++ PLP E D ++ S+G FSF+ +E
Sbjct: 402 VADFIWDQQWALPSHFSNLFPDCAKQILEIPLPNTPESDILIWEHSSSGIFSFSDGYELV 461
Query: 311 RRMDTMVAWEKVTWNKYRIPRHSLIAWLAVNRKLLIAENLRKRGMVIILRWYLCC-QDIE 135
R + W W+ + PR+S++AW + KL + L++RG+ + LC E
Sbjct: 462 RPYFEKLDWASSVWHSFIPPRYSVLAWRIFHLKLPTDDQLQRRGIPFVSVCQLCSFSHTE 521
Query: 134 DNDHVFFKCTFSCSIW 87
D H+F C+F+ IW
Sbjct: 522 DIPHLFVNCSFAQHIW 537
>ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 364
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/97 (32%), Positives = 57/97 (58%)
Frame = -1
Query: 377 DKVVRTLMSNGKFSFNSAWESTRRMDTMVAWEKVTWNKYRIPRHSLIAWLAVNRKLLIAE 198
DK++ +S+G+ S A++ R + W K+ W+K+ IPR SL +W + ++L +
Sbjct: 3 DKLIWVPLSSGELSAKEAFQFLRPRLPSLDWGKLIWSKFIIPRISLHSWKVLRGRVLSED 62
Query: 197 NLRKRGMVIILRWYLCCQDIEDNDHVFFKCTFSCSIW 87
L++RG+ + R LC +D E H+F C+F+ S+W
Sbjct: 63 LLQRRGIALASRCVLCGRDGESLPHIFLTCSFAASLW 99
>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
Length = 409
Score = 67.4 bits (163), Expect = 2e-09
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 1/136 (0%)
Frame = -1
Query: 491 VSDFADPNGWIIRGHDDERDQEICRKVQNHPLPWPNEVDKVVRTLMSNGKFSFNSAWEST 312
V+++ WI+ +D + K+ LP +DK++ T +G S A+
Sbjct: 3 VANYLVNGEWILSDFFAYKDNALVEKIHQIALPLDETLDKLIWTDSVDGDLSNKLAFSFL 62
Query: 311 RRMDTMVAWEKVTWNKYRIPRHSLIAWLAVNRKLLIAENLRKRGMVII-LRWYLCCQDIE 135
V W K+ WN Y P + I W ++ KL +NLRKRG I+ + C + E
Sbjct: 63 PGHGPTVHWAKMLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAE 122
Query: 134 DNDHVFFKCTFSCSIW 87
+ H+F +C + +W
Sbjct: 123 TSSHIFLQCPVTLQLW 138
>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
AT4g02490 [Arabidopsis thaliana]
Length = 657
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/93 (31%), Positives = 46/93 (49%)
Frame = -1
Query: 350 NGKFSFNSAWESTRRMDTMVAWEKVTWNKYRIPRHSLIAWLAVNRKLLIAENLRKRGMVI 171
+ KFS W + + V+W K W ++P+H+ I+W+ +L + LR G+++
Sbjct: 561 SSKFSTADTWRALQPFSVSVSWHKAVWFTNQVPKHAFISWVTAWNRLHTRDRLRSWGLIV 620
Query: 170 ILRWYLCCQDIEDNDHVFFKCTFSCSIWLEVLR 72
LC E DH+FF C FS IW +R
Sbjct: 621 PAECVLCNLVDETRDHLFFACRFSSRIWTFFMR 653
>ref|NP_174632.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
gi|332193496|gb|AEE31617.1| RNA-directed DNA polymerase
(reverse transcriptase)-related family protein
[Arabidopsis thaliana]
Length = 210
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/97 (35%), Positives = 46/97 (47%)
Frame = -1
Query: 377 DKVVRTLMSNGKFSFNSAWESTRRMDTMVAWEKVTWNKYRIPRHSLIAWLAVNRKLLIAE 198
D VV + NG FS W + R +V+W K W K P+H+ W+ +L
Sbjct: 19 DWVVEDKLCNG-FSSAKTWAALRPRSDVVSWAKTVWFKGATPKHAFHMWVTNLDRLPTKT 77
Query: 197 NLRKRGMVIILRWYLCCQDIEDNDHVFFKCTFSCSIW 87
L GM + LC DIED DH+F C F+C +W
Sbjct: 78 RLASWGMQLQTTCGLCSLDIEDRDHLFLTCEFACFLW 114
>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
protein ccsA [Medicago truncatula]
Length = 666
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/94 (32%), Positives = 47/94 (50%)
Frame = -1
Query: 368 VRTLMSNGKFSFNSAWESTRRMDTMVAWEKVTWNKYRIPRHSLIAWLAVNRKLLIAENLR 189
+ T +S G + A++ V W+K WN Y P S I W ++ KL ENLR
Sbjct: 9 ILTHISFGDLTNQLAYKFINETGNHVLWDKFLWNSYIPPSRSFITWRLLHNKLPTDENLR 68
Query: 188 KRGMVIILRWYLCCQDIEDNDHVFFKCTFSCSIW 87
KRG +I+ C + E + H+FF+C + +W
Sbjct: 69 KRGCLIVSICCFCMKSAESSQHIFFECHVTSRLW 102
>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
putative protein [Arabidopsis thaliana]
Length = 473
Score = 65.9 bits (159), Expect = 6e-09
Identities = 29/85 (34%), Positives = 41/85 (48%)
Frame = -1
Query: 341 FSFNSAWESTRRMDTMVAWEKVTWNKYRIPRHSLIAWLAVNRKLLIAENLRKRGMVIILR 162
FS W R + VAW K W IP+H+ WLAV+ +L + + M +
Sbjct: 287 FSTKDTWNHIRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRLSTGDRMTLWNMGVDAT 346
Query: 161 WYLCCQDIEDNDHVFFKCTFSCSIW 87
LC + +E DH+FF C F+ IW
Sbjct: 347 CILCNKALESRDHLFFSCPFATEIW 371
>ref|XP_006492047.1| PREDICTED: uncharacterized protein LOC102609829 [Citrus sinensis]
Length = 418
Score = 65.1 bits (157), Expect = 1e-08
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Frame = -1
Query: 491 VSDFADPNGWIIRGHDDERDQEICRKVQNHPLPWPNEVDKVVRTLMSNGKFSFNSAWEST 312
VS N W I + + ++ PLP D ++ +NG +F + +++
Sbjct: 225 VSSLIAANSWSIPEAFQQYFPTLTTQILAVPLPLEPVDDVLIWEHSNNGMLTFTNC-DNS 283
Query: 311 RRMDTMVAWEKVTWNKYRIPRHSLIAWLAVNRKLLIAENLRKRGMVIILRWYLCC--QDI 138
++ W W+KY P+ S++AW +++L +NLR RGM I+ + LC Q
Sbjct: 284 FLGESSAQWNVALWSKYIPPKFSILAWKLFHKRLSTKDNLRLRGMYILSAYQLCTTKQCE 343
Query: 137 EDNDHVFFKCTFSCSIW 87
E H+FF C F+ +W
Sbjct: 344 ETISHLFFNCHFATKLW 360
>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 323
Score = 65.1 bits (157), Expect = 1e-08
Identities = 31/85 (36%), Positives = 46/85 (54%)
Frame = -1
Query: 341 FSFNSAWESTRRMDTMVAWEKVTWNKYRIPRHSLIAWLAVNRKLLIAENLRKRGMVIILR 162
FS + W + +V W+K W K RIP+H+ I W+A ++L + L + G+ I
Sbjct: 136 FSASKTWTALNPDGVLVPWQKSVWFKDRIPKHAFICWVAAWKRLHTRDRLTQWGLNIPTV 195
Query: 161 WYLCCQDIEDNDHVFFKCTFSCSIW 87
LC E +DH+FF+C FS IW
Sbjct: 196 CVLCNVVDETHDHLFFQCQFSNEIW 220
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/96 (31%), Positives = 45/96 (46%)
Frame = -1
Query: 350 NGKFSFNSAWESTRRMDTMVAWEKVTWNKYRIPRHSLIAWLAVNRKLLIAENLRKRGMVI 171
+ +FS W + T V W K W K +P+ + I W+ + +L + LR+ G I
Sbjct: 965 SNRFSTADTWSYLQPSSTSVLWHKAVWFKDHVPKQAFICWVVAHNRLHTRDRLRRWGFSI 1024
Query: 170 ILRWYLCCQDIEDNDHVFFKCTFSCSIWLEVLRHWN 63
LC E +H+FF+C FS IW +R N
Sbjct: 1025 PPTCVLCNDLDESREHLFFRCQFSSEIWSFFMRALN 1060
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 63.2 bits (152), Expect = 4e-08
Identities = 28/90 (31%), Positives = 43/90 (47%)
Frame = -1
Query: 341 FSFNSAWESTRRMDTMVAWEKVTWNKYRIPRHSLIAWLAVNRKLLIAENLRKRGMVIILR 162
FS W TR V W KV W + P++S +WLA + +L + + I
Sbjct: 1038 FSTRDTWHHTRSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWANGIATD 1097
Query: 161 WYLCCQDIEDNDHVFFKCTFSCSIWLEVLR 72
C +E DH+FF C+F+ IW+++ R
Sbjct: 1098 CIFCQGTLETRDHLFFTCSFTSVIWVDLAR 1127
>ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
sativus]
Length = 342
Score = 62.8 bits (151), Expect = 5e-08
Identities = 33/94 (35%), Positives = 46/94 (48%)
Frame = -1
Query: 395 PWPNEVDKVVRTLMSNGKFSFNSAWESTRRMDTMVAWEKVTWNKYRIPRHSLIAWLAVNR 216
P P+ D+ V S FS SAWE+ R + V W + W IP+HS AWLA+
Sbjct: 163 PSPSVEDRWVWVPGSRDSFSITSAWETIRPHSSRVGWSGLLWGGGNIPKHSFCAWLAIRD 222
Query: 215 KLLIAENLRKRGMVIILRWYLCCQDIEDNDHVFF 114
+L + L + I L LC + E +H+FF
Sbjct: 223 RLSTRDRLSRWDRSIPLSCLLCGGNYESRNHLFF 256
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/86 (32%), Positives = 40/86 (46%)
Frame = -1
Query: 344 KFSFNSAWESTRRMDTMVAWEKVTWNKYRIPRHSLIAWLAVNRKLLIAENLRKRGMVIIL 165
KFS W TR T V W W + P+ S AWLAV +L + + + +
Sbjct: 467 KFSTRDTWNQTRNTSTPVTWHMGIWFAHATPKFSFCAWLAVQNRLSTGDKMLQWNRRLSP 526
Query: 164 RWYLCCQDIEDNDHVFFKCTFSCSIW 87
LC +IE +H+FF C ++ IW
Sbjct: 527 TCVLCNNNIETRNHLFFSCCYTAEIW 552
>gb|ABA94478.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1193
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/104 (31%), Positives = 48/104 (46%)
Frame = -1
Query: 389 PNEVDKVVRTLMSNGKFSFNSAWESTRRMDTMVAWEKVTWNKYRIPRHSLIAWLAVNRKL 210
P D ++ NG FS SA+ T K+ W R +LAV
Sbjct: 820 PGSTDSMIWKAAPNGDFSVRSAYSILSAGRTSCPLGKIIWKSRAPARCKFFMFLAVRNTC 879
Query: 209 LIAENLRKRGMVIILRWYLCCQDIEDNDHVFFKCTFSCSIWLEV 78
L A+NL++RG + +LC +D E H+F CTFS +W++V
Sbjct: 880 LTADNLQRRGWKLAPICHLCSKDGESYQHIFQACTFSQQVWVQV 923