BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00055547
         (491 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus not...    57   3e-06

>gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
          Length = 588

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/77 (41%), Positives = 44/77 (57%)
 Frame = +3

Query: 180 FASLSVRSSNKAFFFYLRL*ERSFVRRERAFIVFIESEKAYGRVSRELFGGYWIEKGVWC 359
           F  +  +S+ +A F    L ER        +IVFI+ EKAY RV RE+      +KGV  
Sbjct: 277 FGFMPGKSTTEAIFLLRMLMERYRETNTDLYIVFIDLEKAYDRVPREVLWWVLEKKGVHV 336

Query: 360 RYIDIINDLYEGLVTRV 410
           RYI +I D+Y+G+VT V
Sbjct: 337 RYIKVIKDMYDGVVTSV 353