BLASTX nr result
ID: Akebia25_contig00055530
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00055530
(342 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHE41652.1| RNA polymerase beta' subunit protein, partial (ch... 102 4e-20
ref|YP_762252.1| RNA polymerase beta' subunit-1 [Morus indica] g... 102 6e-20
gb|AGW04658.1| RNA polymerase beta' subunit [Matelea biflora] 102 7e-20
ref|YP_008578164.1| RNA polymerase beta' subunit (chloroplast) [... 102 7e-20
ref|YP_008578079.1| RNA polymerase beta' subunit (chloroplast) [... 102 7e-20
ref|YP_008576294.1| RNA polymerase beta' subunit (chloroplast) [... 102 7e-20
ref|YP_008576124.1| RNA polymerase beta' subunit (chloroplast) [... 102 7e-20
ref|YP_008576039.1| RNA polymerase beta' subunit (chloroplast) [... 102 7e-20
ref|YP_008575614.1| RNA polymerase beta' subunit (chloroplast) [... 102 7e-20
ref|YP_008575104.1| RNA polymerase beta' subunit (chloroplast) [... 102 7e-20
ref|YP_636290.1| RNA polymerase beta' subunit [Eucalyptus globul... 102 7e-20
gb|AEX58447.1| RNA polymerase beta (chloroplast) [Theobroma gran... 102 7e-20
ref|YP_005089325.1| rpoC1 gene product (chloroplast) [Silene vul... 102 7e-20
gb|ADO64881.2| RNA polymerase beta [Theobroma cacao] gi|37192601... 102 7e-20
ref|YP_004021308.1| RNA polymerase beta [Theobroma cacao] gi|309... 102 7e-20
gb|ADH94334.1| RNA polymerase beta subunit [Syzygium cumini] 102 7e-20
sp|Q49L07.2|RPOC1_EUCGG RecName: Full=DNA-directed RNA polymeras... 102 7e-20
gb|AGU00069.1| RNA polymerase beta (chloroplast) [Glycyrrhiza gl... 101 9e-20
gb|AGO63610.1| RNA polymerase beta [Trifolium repens] 101 9e-20
ref|NP_084797.1| RNA polymerase beta' subunit [Lotus japonicus] ... 101 9e-20
>gb|AHE41652.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Paeonia obovata]
Length = 639
Score = 102 bits (255), Expect = 4e-20
Identities = 56/88 (63%), Positives = 64/88 (72%), Gaps = 6/88 (6%)
Frame = -2
Query: 290 VDYSRIEVDLLYKKK------EDRKIGRRKNFLVRRMKLAKHFIRTNVEPEWMVXXXXXX 129
+DYS +E L +++ EDRKIGRRK+FLVRRM+LAKHFIRTN+EPEWMV
Sbjct: 194 IDYSLVEWKELGEERTTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEPEWMVLGLLPV 253
Query: 128 XXXXXXPIIQIDGSKLMSSDINELYRRV 45
PIIQIDG KLMSSDINELYRRV
Sbjct: 254 LPPELRPIIQIDGGKLMSSDINELYRRV 281
>ref|YP_762252.1| RNA polymerase beta' subunit-1 [Morus indica]
gi|122166814|sp|Q09X26.1|RPOC1_MORIN RecName:
Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
gi|78100308|gb|ABB20949.1| RNA polymerase beta'
subunit-1 [Morus indica]
Length = 684
Score = 102 bits (254), Expect = 6e-20
Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 6/88 (6%)
Frame = -2
Query: 290 VDYSRIEVDLLYKKK------EDRKIGRRKNFLVRRMKLAKHFIRTNVEPEWMVXXXXXX 129
+DYS +E L +++ EDRK+GRRK+FLVRRM+LAKHFIRTN+EPEWMV
Sbjct: 212 IDYSLVEWKELGEERPTVNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPV 271
Query: 128 XXXXXXPIIQIDGSKLMSSDINELYRRV 45
PIIQIDG KLMSSDINELYRRV
Sbjct: 272 LPPELRPIIQIDGGKLMSSDINELYRRV 299
>gb|AGW04658.1| RNA polymerase beta' subunit [Matelea biflora]
Length = 686
Score = 102 bits (253), Expect = 7e-20
Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Frame = -2
Query: 305 RTRSDVDYSRI-EVDLLYKKKEDRKIGRRKNFLVRRMKLAKHFIRTNVEPEWMVXXXXXX 129
R S V++ + E DL + +DRK+GRRK+FLVRRM+LAKHFIRTN+EPEWMV
Sbjct: 219 RENSLVEWKELGEEDLTGNEWDDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPV 278
Query: 128 XXXXXXPIIQIDGSKLMSSDINELYRRV 45
PIIQIDG KLMSSDINELYRRV
Sbjct: 279 LPPELRPIIQIDGGKLMSSDINELYRRV 306
>ref|YP_008578164.1| RNA polymerase beta' subunit (chloroplast) [Stockwellia quadrifida]
gi|442569412|gb|AGC59573.1| RNA polymerase beta' subunit
(chloroplast) [Stockwellia quadrifida]
Length = 689
Score = 102 bits (253), Expect = 7e-20
Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 6/88 (6%)
Frame = -2
Query: 290 VDYSRIEVDLLYKKK------EDRKIGRRKNFLVRRMKLAKHFIRTNVEPEWMVXXXXXX 129
+DYS +E L +++ EDRKIGRRK+FLVRRM+LAKHF+RTN+EPEWMV
Sbjct: 219 IDYSLVEWKELGEERPTGNEWEDRKIGRRKDFLVRRMELAKHFLRTNIEPEWMVLCLLPV 278
Query: 128 XXXXXXPIIQIDGSKLMSSDINELYRRV 45
PIIQIDG KLMSSDINELYRRV
Sbjct: 279 LSPELRPIIQIDGDKLMSSDINELYRRV 306
>ref|YP_008578079.1| RNA polymerase beta' subunit (chloroplast) [Allosyncarpia ternata]
gi|442569326|gb|AGC59488.1| RNA polymerase beta' subunit
(chloroplast) [Allosyncarpia ternata]
Length = 689
Score = 102 bits (253), Expect = 7e-20
Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 6/88 (6%)
Frame = -2
Query: 290 VDYSRIEVDLLYKKK------EDRKIGRRKNFLVRRMKLAKHFIRTNVEPEWMVXXXXXX 129
+DYS +E L +++ EDRKIGRRK+FLVRRM+LAKHF+RTN+EPEWMV
Sbjct: 219 IDYSLVEWKELGEERPTGNEWEDRKIGRRKDFLVRRMELAKHFLRTNIEPEWMVLCLLPV 278
Query: 128 XXXXXXPIIQIDGSKLMSSDINELYRRV 45
PIIQIDG KLMSSDINELYRRV
Sbjct: 279 LPPELRPIIQIDGGKLMSSDINELYRRV 306
>ref|YP_008576294.1| RNA polymerase beta' subunit (chloroplast) [Eucalyptus melliodora]
gi|442567434|gb|AGC57618.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus melliodora]
Length = 689
Score = 102 bits (253), Expect = 7e-20
Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 6/88 (6%)
Frame = -2
Query: 290 VDYSRIEVDLLYKKK------EDRKIGRRKNFLVRRMKLAKHFIRTNVEPEWMVXXXXXX 129
+DYS +E L +++ EDRKIGRRK+FLVRRM+LAKHF+RTN+EPEWMV
Sbjct: 219 IDYSLVEWKELGEERPTGNEWEDRKIGRRKDFLVRRMELAKHFLRTNIEPEWMVLCLLPV 278
Query: 128 XXXXXXPIIQIDGSKLMSSDINELYRRV 45
PIIQIDG KLMSSDINELYRRV
Sbjct: 279 LPPELRPIIQIDGGKLMSSDINELYRRV 306
>ref|YP_008576124.1| RNA polymerase beta' subunit (chloroplast) [Eucalyptus marginata]
gi|442567176|gb|AGC57363.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus marginata]
Length = 689
Score = 102 bits (253), Expect = 7e-20
Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 6/88 (6%)
Frame = -2
Query: 290 VDYSRIEVDLLYKKK------EDRKIGRRKNFLVRRMKLAKHFIRTNVEPEWMVXXXXXX 129
+DYS +E L +++ EDRKIGRRK+FLVRRM+LAKHF+RTN+EPEWMV
Sbjct: 219 IDYSLVEWKELGEERHTGNEWEDRKIGRRKDFLVRRMELAKHFLRTNIEPEWMVLCLLPV 278
Query: 128 XXXXXXPIIQIDGSKLMSSDINELYRRV 45
PIIQIDG KLMSSDINELYRRV
Sbjct: 279 LPPELRPIIQIDGGKLMSSDINELYRRV 306
>ref|YP_008576039.1| RNA polymerase beta' subunit (chloroplast) [Eucalyptus patens]
gi|442567090|gb|AGC57278.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus patens]
Length = 689
Score = 102 bits (253), Expect = 7e-20
Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 6/88 (6%)
Frame = -2
Query: 290 VDYSRIEVDLLYKKK------EDRKIGRRKNFLVRRMKLAKHFIRTNVEPEWMVXXXXXX 129
+DYS +E L +++ EDRKIGRRK+FLVRRM+LAKHF+RTN+EPEWMV
Sbjct: 219 IDYSLVEWKELGEERHTGNEWEDRKIGRRKDFLVRRMELAKHFLRTNIEPEWMVLCLLPV 278
Query: 128 XXXXXXPIIQIDGSKLMSSDINELYRRV 45
PIIQIDG KLMSSDINELYRRV
Sbjct: 279 LPPELRPIIQIDGGKLMSSDINELYRRV 306
>ref|YP_008575614.1| RNA polymerase beta' subunit (chloroplast) [Eucalyptus sieberi]
gi|545716838|ref|YP_008575699.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus elata]
gi|442566660|gb|AGC56853.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus sieberi]
gi|442566746|gb|AGC56938.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus elata]
Length = 689
Score = 102 bits (253), Expect = 7e-20
Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 6/88 (6%)
Frame = -2
Query: 290 VDYSRIEVDLLYKKK------EDRKIGRRKNFLVRRMKLAKHFIRTNVEPEWMVXXXXXX 129
+DYS +E L +++ EDRKIGRRK+FLVRRM+LAKHF+RTN+EPEWMV
Sbjct: 219 IDYSLVEWKELGEERHTGNEWEDRKIGRRKDFLVRRMELAKHFLRTNIEPEWMVLCLLPV 278
Query: 128 XXXXXXPIIQIDGSKLMSSDINELYRRV 45
PIIQIDG KLMSSDINELYRRV
Sbjct: 279 LPPELRPIIQIDGGKLMSSDINELYRRV 306
>ref|YP_008575104.1| RNA polymerase beta' subunit (chloroplast) [Eucalyptus obliqua]
gi|545716322|ref|YP_008575189.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus radiata]
gi|545716408|ref|YP_008575274.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus delegatensis]
gi|545716494|ref|YP_008575359.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus verrucata]
gi|545716580|ref|YP_008575444.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus baxteri]
gi|545716666|ref|YP_008575529.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus diversifolia]
gi|545716924|ref|YP_008575784.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus regnans]
gi|545717010|ref|YP_008575869.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus umbra]
gi|545717096|ref|YP_008575954.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus cloeziana]
gi|442566144|gb|AGC56343.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus obliqua]
gi|442566230|gb|AGC56428.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus radiata]
gi|442566316|gb|AGC56513.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus delegatensis]
gi|442566402|gb|AGC56598.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus verrucata]
gi|442566488|gb|AGC56683.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus baxteri]
gi|442566574|gb|AGC56768.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus diversifolia]
gi|442566832|gb|AGC57023.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus regnans]
gi|442566918|gb|AGC57108.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus umbra]
gi|442567004|gb|AGC57193.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus cloeziana]
Length = 689
Score = 102 bits (253), Expect = 7e-20
Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 6/88 (6%)
Frame = -2
Query: 290 VDYSRIEVDLLYKKK------EDRKIGRRKNFLVRRMKLAKHFIRTNVEPEWMVXXXXXX 129
+DYS +E L +++ EDRKIGRRK+FLVRRM+LAKHF+RTN+EPEWMV
Sbjct: 219 IDYSLVEWKELGEERHTGNEWEDRKIGRRKDFLVRRMELAKHFLRTNIEPEWMVLCLLPV 278
Query: 128 XXXXXXPIIQIDGSKLMSSDINELYRRV 45
PIIQIDG KLMSSDINELYRRV
Sbjct: 279 LPPELRPIIQIDGGKLMSSDINELYRRV 306
>ref|YP_636290.1| RNA polymerase beta' subunit [Eucalyptus globulus subsp. globulus]
gi|545717526|ref|YP_008576379.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus polybractea]
gi|545717612|ref|YP_008576464.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus cladocalyx]
gi|545717698|ref|YP_008576549.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus nitens]
gi|545717784|ref|YP_008576634.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus aromaphloia]
gi|545717870|ref|YP_008576719.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus saligna]
gi|545717956|ref|YP_008576804.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus camaldulensis]
gi|545718042|ref|YP_008576889.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus deglupta]
gi|545718128|ref|YP_008576974.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus spathulata]
gi|545718214|ref|YP_008577059.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus torquata]
gi|545718300|ref|YP_008577144.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus diversicolor]
gi|545718386|ref|YP_008577229.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus salmonophloia]
gi|545718472|ref|YP_008577314.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus microcorys]
gi|545718558|ref|YP_008577399.1| RNA polymerase beta'
subunit (chloroplast) [Eucalyptus guilfoylei]
gi|60460800|gb|AAX21020.1| RNA polymerase beta subunit
[Eucalyptus globulus subsp. globulus]
gi|442567348|gb|AGC57533.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus melliodora]
gi|442567520|gb|AGC57703.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus polybractea]
gi|442567606|gb|AGC57788.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus cladocalyx]
gi|442567692|gb|AGC57873.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus globulus]
gi|442567778|gb|AGC57958.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus nitens]
gi|442567864|gb|AGC58043.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus aromaphloia]
gi|442567950|gb|AGC58128.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus saligna]
gi|442568036|gb|AGC58213.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus camaldulensis]
gi|442568122|gb|AGC58298.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus deglupta]
gi|442568208|gb|AGC58383.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus spathulata]
gi|442568294|gb|AGC58468.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus torquata]
gi|442568380|gb|AGC58553.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus diversicolor]
gi|442568466|gb|AGC58638.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus salmonophloia]
gi|442568552|gb|AGC58723.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus microcorys]
gi|442568638|gb|AGC58808.1| RNA polymerase beta' subunit
(chloroplast) [Eucalyptus guilfoylei]
Length = 689
Score = 102 bits (253), Expect = 7e-20
Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 6/88 (6%)
Frame = -2
Query: 290 VDYSRIEVDLLYKKK------EDRKIGRRKNFLVRRMKLAKHFIRTNVEPEWMVXXXXXX 129
+DYS +E L +++ EDRKIGRRK+FLVRRM+LAKHF+RTN+EPEWMV
Sbjct: 219 IDYSLVEWKELGEERPTGNEWEDRKIGRRKDFLVRRMELAKHFLRTNIEPEWMVLCLLPV 278
Query: 128 XXXXXXPIIQIDGSKLMSSDINELYRRV 45
PIIQIDG KLMSSDINELYRRV
Sbjct: 279 LPPELRPIIQIDGGKLMSSDINELYRRV 306
>gb|AEX58447.1| RNA polymerase beta (chloroplast) [Theobroma grandiflorum]
Length = 682
Score = 102 bits (253), Expect = 7e-20
Identities = 56/88 (63%), Positives = 63/88 (71%), Gaps = 6/88 (6%)
Frame = -2
Query: 290 VDYSRIEVDLLYKKK------EDRKIGRRKNFLVRRMKLAKHFIRTNVEPEWMVXXXXXX 129
+DYS +E L ++ EDRKIGRRK+FLVRRM+LAKHFIRTN+EPEWMV
Sbjct: 212 IDYSLVEWKELGEESLTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPV 271
Query: 128 XXXXXXPIIQIDGSKLMSSDINELYRRV 45
PIIQIDG KLMSSDINELYRRV
Sbjct: 272 LPPELRPIIQIDGGKLMSSDINELYRRV 299
>ref|YP_005089325.1| rpoC1 gene product (chloroplast) [Silene vulgaris]
gi|329755677|gb|AEC04238.1| RNA polymerase beta
(chloroplast) [Silene vulgaris]
Length = 684
Score = 102 bits (253), Expect = 7e-20
Identities = 55/91 (60%), Positives = 64/91 (70%), Gaps = 6/91 (6%)
Frame = -2
Query: 299 RSDVDYS------RIEVDLLYKKKEDRKIGRRKNFLVRRMKLAKHFIRTNVEPEWMVXXX 138
R+ +DYS +E D + EDRK+GRRK+FLVRRM+LAKHFIRTN+EPEWMV
Sbjct: 209 RTIIDYSFAEWKELVEEDPTGNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPEWMVLCL 268
Query: 137 XXXXXXXXXPIIQIDGSKLMSSDINELYRRV 45
PIIQIDG KLMSSDINELYRR+
Sbjct: 269 LPVLPPELRPIIQIDGGKLMSSDINELYRRI 299
>gb|ADO64881.2| RNA polymerase beta [Theobroma cacao] gi|371926010|gb|AEX57799.1|
RNA polymerase beta (chloroplast) [Theobroma cacao]
gi|371926748|gb|AEX58528.1| RNA polymerase beta
(chloroplast) [Theobroma cacao]
Length = 682
Score = 102 bits (253), Expect = 7e-20
Identities = 56/88 (63%), Positives = 63/88 (71%), Gaps = 6/88 (6%)
Frame = -2
Query: 290 VDYSRIEVDLLYKKK------EDRKIGRRKNFLVRRMKLAKHFIRTNVEPEWMVXXXXXX 129
+DYS +E L ++ EDRKIGRRK+FLVRRM+LAKHFIRTN+EPEWMV
Sbjct: 212 IDYSLVEWKELGEESLTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPV 271
Query: 128 XXXXXXPIIQIDGSKLMSSDINELYRRV 45
PIIQIDG KLMSSDINELYRRV
Sbjct: 272 LPPELRPIIQIDGGKLMSSDINELYRRV 299
>ref|YP_004021308.1| RNA polymerase beta [Theobroma cacao] gi|309321258|gb|ADO64801.1|
RNA polymerase beta [Theobroma cacao]
gi|371925928|gb|AEX57718.1| RNA polymerase beta
(chloroplast) [Theobroma cacao]
gi|371926092|gb|AEX57880.1| RNA polymerase beta
(chloroplast) [Theobroma cacao]
gi|371926174|gb|AEX57961.1| RNA polymerase beta
(chloroplast) [Theobroma cacao]
gi|371926256|gb|AEX58042.1| RNA polymerase beta
(chloroplast) [Theobroma cacao]
gi|371926338|gb|AEX58123.1| RNA polymerase beta
(chloroplast) [Theobroma cacao]
gi|371926420|gb|AEX58204.1| RNA polymerase beta
(chloroplast) [Theobroma cacao]
gi|371926502|gb|AEX58285.1| RNA polymerase beta
(chloroplast) [Theobroma cacao]
gi|371926584|gb|AEX58366.1| RNA polymerase beta
(chloroplast) [Theobroma cacao]
Length = 682
Score = 102 bits (253), Expect = 7e-20
Identities = 56/88 (63%), Positives = 63/88 (71%), Gaps = 6/88 (6%)
Frame = -2
Query: 290 VDYSRIEVDLLYKKK------EDRKIGRRKNFLVRRMKLAKHFIRTNVEPEWMVXXXXXX 129
+DYS +E L ++ EDRKIGRRK+FLVRRM+LAKHFIRTN+EPEWMV
Sbjct: 212 IDYSLVEWKELGEESLTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEPEWMVLCLLPV 271
Query: 128 XXXXXXPIIQIDGSKLMSSDINELYRRV 45
PIIQIDG KLMSSDINELYRRV
Sbjct: 272 LPPELRPIIQIDGGKLMSSDINELYRRV 299
>gb|ADH94334.1| RNA polymerase beta subunit [Syzygium cumini]
Length = 689
Score = 102 bits (253), Expect = 7e-20
Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 6/88 (6%)
Frame = -2
Query: 290 VDYSRIEVDLLYKKK------EDRKIGRRKNFLVRRMKLAKHFIRTNVEPEWMVXXXXXX 129
+DYS +E L +++ EDRKIGRRK+FLVRRM+LAKHF+RTN+EPEWMV
Sbjct: 219 IDYSLVEWKELGEERPTGNEWEDRKIGRRKDFLVRRMELAKHFLRTNIEPEWMVLCLLPV 278
Query: 128 XXXXXXPIIQIDGSKLMSSDINELYRRV 45
PIIQIDG KLMSSDINELYRRV
Sbjct: 279 LPPELRPIIQIDGGKLMSSDINELYRRV 306
>sp|Q49L07.2|RPOC1_EUCGG RecName: Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
Length = 682
Score = 102 bits (253), Expect = 7e-20
Identities = 55/88 (62%), Positives = 64/88 (72%), Gaps = 6/88 (6%)
Frame = -2
Query: 290 VDYSRIEVDLLYKKK------EDRKIGRRKNFLVRRMKLAKHFIRTNVEPEWMVXXXXXX 129
+DYS +E L +++ EDRKIGRRK+FLVRRM+LAKHF+RTN+EPEWMV
Sbjct: 212 IDYSLVEWKELGEERPTGNEWEDRKIGRRKDFLVRRMELAKHFLRTNIEPEWMVLCLLPV 271
Query: 128 XXXXXXPIIQIDGSKLMSSDINELYRRV 45
PIIQIDG KLMSSDINELYRRV
Sbjct: 272 LPPELRPIIQIDGGKLMSSDINELYRRV 299
>gb|AGU00069.1| RNA polymerase beta (chloroplast) [Glycyrrhiza glabra]
Length = 684
Score = 101 bits (252), Expect = 9e-20
Identities = 51/67 (76%), Positives = 54/67 (80%)
Frame = -2
Query: 245 EDRKIGRRKNFLVRRMKLAKHFIRTNVEPEWMVXXXXXXXXXXXXPIIQIDGSKLMSSDI 66
EDRK+GRRKNFLVRRM+LAKHFIRTN+EPEWMV PIIQIDG KLMSSDI
Sbjct: 235 EDRKVGRRKNFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDI 294
Query: 65 NELYRRV 45
NELYRRV
Sbjct: 295 NELYRRV 301
>gb|AGO63610.1| RNA polymerase beta [Trifolium repens]
Length = 683
Score = 101 bits (252), Expect = 9e-20
Identities = 51/67 (76%), Positives = 54/67 (80%)
Frame = -2
Query: 245 EDRKIGRRKNFLVRRMKLAKHFIRTNVEPEWMVXXXXXXXXXXXXPIIQIDGSKLMSSDI 66
EDRK+GRRKNFLVRRM+LAKHFIRTN+EPEWMV PIIQIDG KLMSSDI
Sbjct: 234 EDRKVGRRKNFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDI 293
Query: 65 NELYRRV 45
NELYRRV
Sbjct: 294 NELYRRV 300
>ref|NP_084797.1| RNA polymerase beta' subunit [Lotus japonicus]
gi|23822110|sp|Q9BBS8.1|RPOC1_LOTJA RecName:
Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
gi|13358978|dbj|BAB33195.1| RNA polymerase beta'
subunit-1 [Lotus japonicus]
Length = 682
Score = 101 bits (252), Expect = 9e-20
Identities = 51/67 (76%), Positives = 54/67 (80%)
Frame = -2
Query: 245 EDRKIGRRKNFLVRRMKLAKHFIRTNVEPEWMVXXXXXXXXXXXXPIIQIDGSKLMSSDI 66
EDRK+GRRKNFLVRRM+LAKHFIRTN+EPEWMV PIIQIDG KLMSSDI
Sbjct: 235 EDRKVGRRKNFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDI 294
Query: 65 NELYRRV 45
NELYRRV
Sbjct: 295 NELYRRV 301