BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00055265
         (255 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prun...    92   6e-17
ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prun...    92   6e-17
ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mit...    87   2e-15
ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitoc...    87   2e-15
ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitoc...    85   9e-15
ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Caps...    84   2e-14
gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]            84   2e-14
ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...    83   3e-14
ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Popu...    82   6e-14
ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [...    82   8e-14
ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitoc...    82   1e-13
ref|XP_006406501.1| hypothetical protein EUTSA_v10020633mg [Eutr...    80   3e-13
ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thalian...    80   4e-13
ref|XP_002883182.1| pseudouridine synthase family protein [Arabi...    78   1e-12
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...    78   1e-12
ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citr...    78   1e-12
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc...    77   2e-12
ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [A...    74   3e-11
gb|EPS60113.1| hypothetical protein M569_14691, partial [Genlise...    73   5e-11
gb|AFK47864.1| unknown [Lotus japonicus]                               68   1e-09

>ref|XP_007199810.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
           gi|462395210|gb|EMJ01009.1| hypothetical protein
           PRUPE_ppa004969mg [Prunus persica]
          Length = 483

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 48/75 (64%), Positives = 56/75 (74%), Gaps = 8/75 (10%)
 Frame = -1

Query: 210 WLTLPSFTSTINPTLVAKEISRTHNHS---IQKSET-----TTTTALKWVLRCCPQLPRS 55
           W TLP FT+TIN + + KE+SR  ++    I K+ T     TTTTALKWV RCCP+LPRS
Sbjct: 50  WFTLPPFTATINGSALGKELSRNRSYGRDVITKTATASTTSTTTTALKWVTRCCPELPRS 109

Query: 54  LVQKLFRLRQVRRES 10
           LVQKLFRLRQVRRES
Sbjct: 110 LVQKLFRLRQVRRES 124


>ref|XP_007199809.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
           gi|462395209|gb|EMJ01008.1| hypothetical protein
           PRUPE_ppa004969mg [Prunus persica]
          Length = 481

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 48/75 (64%), Positives = 56/75 (74%), Gaps = 8/75 (10%)
 Frame = -1

Query: 210 WLTLPSFTSTINPTLVAKEISRTHNHS---IQKSET-----TTTTALKWVLRCCPQLPRS 55
           W TLP FT+TIN + + KE+SR  ++    I K+ T     TTTTALKWV RCCP+LPRS
Sbjct: 50  WFTLPPFTATINGSALGKELSRNRSYGRDVITKTATASTTSTTTTALKWVTRCCPELPRS 109

Query: 54  LVQKLFRLRQVRRES 10
           LVQKLFRLRQVRRES
Sbjct: 110 LVQKLFRLRQVRRES 124


>ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like
           [Solanum tuberosum]
          Length = 467

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 40/70 (57%), Positives = 54/70 (77%)
 Frame = -1

Query: 210 WLTLPSFTSTINPTLVAKEISRTHNHSIQKSETTTTTALKWVLRCCPQLPRSLVQKLFRL 31
           WLTLP FT+T+N   + +E++      ++++ T T TALKWV RCCP+LP+SLVQKLFRL
Sbjct: 58  WLTLPPFTATVNGAALGRELAGV-KMDVKENSTNTMTALKWVQRCCPELPKSLVQKLFRL 116

Query: 30  RQVRRESSKL 1
           RQVRR+SS +
Sbjct: 117 RQVRRDSSNV 126


>ref|XP_004305959.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Fragaria
           vesca subsp. vesca]
          Length = 476

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
 Frame = -1

Query: 210 WLTLPSFTSTINPTLVAKEISRTHNHSI--QKSETTTTTALKWVLRCCPQLPRSLVQKLF 37
           W TLP FT T+N   + +E+SR+    +  + S    TTALKWV RCCP++PR+LVQKLF
Sbjct: 52  WFTLPPFTDTVNGAALGRELSRSVGRDVYAKPSAAAATTALKWVTRCCPEIPRNLVQKLF 111

Query: 36  RLRQVRRESSKL 1
           RLRQVRRE+S +
Sbjct: 112 RLRQVRREASDM 123


>ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Solanum
           lycopersicum]
          Length = 467

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 39/70 (55%), Positives = 52/70 (74%)
 Frame = -1

Query: 210 WLTLPSFTSTINPTLVAKEISRTHNHSIQKSETTTTTALKWVLRCCPQLPRSLVQKLFRL 31
           WLTLP FT+ +N   + +E++      + ++ T T TALKWV RCCP+LP+SLVQKLFRL
Sbjct: 58  WLTLPPFTAAVNGAALGRELAGV-KMDVNENSTNTMTALKWVQRCCPELPKSLVQKLFRL 116

Query: 30  RQVRRESSKL 1
           RQVRR+SS +
Sbjct: 117 RQVRRDSSNV 126


>ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Capsella rubella]
           gi|482566291|gb|EOA30480.1| hypothetical protein
           CARUB_v10013603mg [Capsella rubella]
          Length = 476

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 39/68 (57%), Positives = 52/68 (76%)
 Frame = -1

Query: 210 WLTLPSFTSTINPTLVAKEISRTHNHSIQKSETTTTTALKWVLRCCPQLPRSLVQKLFRL 31
           WLTLP F+ T++ T V KE++   +     ++++TTTAL+W+LRC P LPR+LVQKLFRL
Sbjct: 55  WLTLPPFSPTVDGTAVGKELASEGDSITGSTDSSTTTALRWILRCRPDLPRTLVQKLFRL 114

Query: 30  RQVRRESS 7
           RQVRRE S
Sbjct: 115 RQVRREMS 122


>gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]
          Length = 470

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 40/70 (57%), Positives = 52/70 (74%), Gaps = 3/70 (4%)
 Frame = -1

Query: 210 WLTLPSFTSTINPTLVAKEISRTHNHSI---QKSETTTTTALKWVLRCCPQLPRSLVQKL 40
           W TLP  T+T++  ++ K I+   +  +   Q S++  TTALKWV+RCCP+LPRSLVQKL
Sbjct: 49  WFTLPPHTATVDGAVLGKAIAGAKDDDVKVLQASKSAATTALKWVVRCCPELPRSLVQKL 108

Query: 39  FRLRQVRRES 10
           FRLRQVRRES
Sbjct: 109 FRLRQVRRES 118


>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
           vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
           product [Vitis vinifera]
          Length = 476

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 42/70 (60%), Positives = 51/70 (72%), Gaps = 3/70 (4%)
 Frame = -1

Query: 210 WLTLPSFTSTINPTLVAKEISRTHNHSIQKSETT---TTTALKWVLRCCPQLPRSLVQKL 40
           W TLP+FT  ++ + + K +S  H   +    TT   +TTALKWV+RCCPQLPRSLVQKL
Sbjct: 56  WFTLPAFTPVVDASSLGKVLSG-HRTDLNTGNTTAGASTTALKWVVRCCPQLPRSLVQKL 114

Query: 39  FRLRQVRRES 10
           FRLRQVRRES
Sbjct: 115 FRLRQVRRES 124


>ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
           gi|550331407|gb|EEE87831.2| hypothetical protein
           POPTR_0009s09860g [Populus trichocarpa]
          Length = 471

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 41/67 (61%), Positives = 49/67 (73%)
 Frame = -1

Query: 210 WLTLPSFTSTINPTLVAKEISRTHNHSIQKSETTTTTALKWVLRCCPQLPRSLVQKLFRL 31
           W TLP +TSTIN +++   +S      I     + TTALKWVLRCCP+LPR+LVQKLFRL
Sbjct: 58  WFTLPPYTSTINGSVLGIALSAR----IPAKSASETTALKWVLRCCPELPRNLVQKLFRL 113

Query: 30  RQVRRES 10
           RQVRRES
Sbjct: 114 RQVRRES 120


>ref|XP_007042534.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
           gi|508706469|gb|EOX98365.1| Ribosomal pseudouridine
           synthase, putative [Theobroma cacao]
          Length = 477

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 42/70 (60%), Positives = 52/70 (74%)
 Frame = -1

Query: 210 WLTLPSFTSTINPTLVAKEISRTHNHSIQKSETTTTTALKWVLRCCPQLPRSLVQKLFRL 31
           W TLP FT T+N +++  ++S    HS   +ETT   A+KWV+RCCP+LPRSLVQKLFRL
Sbjct: 63  WFTLPPFTKTVNASVLGAKLSGKP-HSKAANETT---AVKWVMRCCPELPRSLVQKLFRL 118

Query: 30  RQVRRESSKL 1
           RQVRRES  L
Sbjct: 119 RQVRRESHVL 128


>ref|XP_004170490.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 37/70 (52%), Positives = 49/70 (70%)
 Frame = -1

Query: 210 WLTLPSFTSTINPTLVAKEISRTHNHSIQKSETTTTTALKWVLRCCPQLPRSLVQKLFRL 31
           W TLP +T+T+N +++   I      +   + T   TALKWV+RCCP+LPRSLVQKLFRL
Sbjct: 60  WFTLPPYTATVNGSILGNRIMNGGGQAELGASTAAITALKWVIRCCPELPRSLVQKLFRL 119

Query: 30  RQVRRESSKL 1
           R+VRR SS +
Sbjct: 120 RKVRRGSSMI 129


>ref|XP_006406501.1| hypothetical protein EUTSA_v10020633mg [Eutrema salsugineum]
           gi|557107647|gb|ESQ47954.1| hypothetical protein
           EUTSA_v10020633mg [Eutrema salsugineum]
          Length = 477

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 40/68 (58%), Positives = 50/68 (73%)
 Frame = -1

Query: 210 WLTLPSFTSTINPTLVAKEISRTHNHSIQKSETTTTTALKWVLRCCPQLPRSLVQKLFRL 31
           WLTLP F+ TI+   V KE+  +   S++ S   +TTAL+W+LRC P LPR+LVQKLFRL
Sbjct: 58  WLTLPPFSPTIDAAAVGKELF-SDGDSVKASSDGSTTALRWILRCRPDLPRTLVQKLFRL 116

Query: 30  RQVRRESS 7
           RQVRRE S
Sbjct: 117 RQVRREMS 124


>ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thaliana]
           gi|75274073|sp|Q9LT72.1|PUS4_ARATH RecName: Full=RNA
           pseudouridine synthase 4, mitochondrial; AltName:
           Full=RNA pseudouridylate synthase 4; AltName:
           Full=RNA-uridine isomerase 4; Flags: Precursor
           gi|11994467|dbj|BAB02469.1| unnamed protein product
           [Arabidopsis thaliana] gi|110737723|dbj|BAF00800.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|134031916|gb|ABO45695.1| At3g19440 [Arabidopsis
           thaliana] gi|332642719|gb|AEE76240.1| RNA pseudourine
           synthase 4 [Arabidopsis thaliana]
          Length = 477

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 38/68 (55%), Positives = 49/68 (72%)
 Frame = -1

Query: 210 WLTLPSFTSTINPTLVAKEISRTHNHSIQKSETTTTTALKWVLRCCPQLPRSLVQKLFRL 31
           WLTLP F+ TI+ T V K++    +     ++ + TTAL+W+LRC P LPR+LVQKLFRL
Sbjct: 55  WLTLPPFSPTIDGTAVGKDLLSDGDSVKSSTDNSKTTALRWILRCRPDLPRTLVQKLFRL 114

Query: 30  RQVRRESS 7
           RQVRRE S
Sbjct: 115 RQVRREMS 122


>ref|XP_002883182.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297329022|gb|EFH59441.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 477

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 37/68 (54%), Positives = 49/68 (72%)
 Frame = -1

Query: 210 WLTLPSFTSTINPTLVAKEISRTHNHSIQKSETTTTTALKWVLRCCPQLPRSLVQKLFRL 31
           WLTLP F+ TI+ T V K++    +     ++ + TTAL+W+LRC P LPR+LVQKLFRL
Sbjct: 55  WLTLPPFSPTIDGTAVGKDLLSDGDSVKASTDNSKTTALRWILRCRPDLPRTLVQKLFRL 114

Query: 30  RQVRRESS 7
           RQVRR+ S
Sbjct: 115 RQVRRQMS 122


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 536

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 39/66 (59%), Positives = 49/66 (74%)
 Frame = -1

Query: 210 WLTLPSFTSTINPTLVAKEISRTHNHSIQKSETTTTTALKWVLRCCPQLPRSLVQKLFRL 31
           + TLP +TSTI+ + + K +S T         +T TTALKWVLRCCP+LPR+LVQKLFRL
Sbjct: 128 FFTLPPYTSTISGSALGKALSATAT----AKASTETTALKWVLRCCPELPRNLVQKLFRL 183

Query: 30  RQVRRE 13
           RQV+RE
Sbjct: 184 RQVKRE 189


>ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citrus clementina]
           gi|557524859|gb|ESR36165.1| hypothetical protein
           CICLE_v10028283mg [Citrus clementina]
          Length = 494

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 39/70 (55%), Positives = 49/70 (70%)
 Frame = -1

Query: 210 WLTLPSFTSTINPTLVAKEISRTHNHSIQKSETTTTTALKWVLRCCPQLPRSLVQKLFRL 31
           W TLP FTSTI+ + + ++++        KS  + TTALKWVL+CCP LPR+ VQKLFRL
Sbjct: 81  WFTLPPFTSTIDGSALGRQLACP-----SKSPISETTALKWVLQCCPGLPRNFVQKLFRL 135

Query: 30  RQVRRESSKL 1
            QVRRES  L
Sbjct: 136 SQVRRESPSL 145


>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
           sativus]
          Length = 466

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 34/66 (51%), Positives = 46/66 (69%)
 Frame = -1

Query: 210 WLTLPSFTSTINPTLVAKEISRTHNHSIQKSETTTTTALKWVLRCCPQLPRSLVQKLFRL 31
           W TLP +T+T+N +++   I      +   + T   TALKWV+RCCP+LPRSLVQKLFRL
Sbjct: 60  WFTLPPYTATVNGSILGNRIMNGGGQAELGASTAAITALKWVIRCCPELPRSLVQKLFRL 119

Query: 30  RQVRRE 13
           R+V R+
Sbjct: 120 RKVPRQ 125


>ref|XP_006847251.1| hypothetical protein AMTR_s00015p00025410 [Amborella trichopoda]
           gi|548850328|gb|ERN08832.1| hypothetical protein
           AMTR_s00015p00025410 [Amborella trichopoda]
          Length = 457

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 36/68 (52%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
 Frame = -1

Query: 210 WLTLPSFT-STINPTLVAKEISRTHNHSIQKSETTTTTALKWVLRCCPQLPRSLVQKLFR 34
           W TLPSF  ++++P++           + + ++  +TTALKWVLRCCPQ+PRSL+QKLFR
Sbjct: 49  WFTLPSFPGASLSPSI----------STAKTAKAPSTTALKWVLRCCPQVPRSLIQKLFR 98

Query: 33  LRQVRRES 10
           LRQVR+ES
Sbjct: 99  LRQVRKES 106


>gb|EPS60113.1| hypothetical protein M569_14691, partial [Genlisea aurea]
          Length = 165

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 36/68 (52%), Positives = 43/68 (63%)
 Frame = -1

Query: 210 WLTLPSFTSTINPTLVAKEISRTHNHSIQKSETTTTTALKWVLRCCPQLPRSLVQKLFRL 31
           WLTLP+F+ T +     K I   H         T  T LKW+L CCPQLPRSLVQKLFRL
Sbjct: 1   WLTLPAFSETADACSTGKRIFGRH-------PVTNMTTLKWILNCCPQLPRSLVQKLFRL 53

Query: 30  RQVRRESS 7
           R+VR++ S
Sbjct: 54  RRVRKKCS 61


>gb|AFK47864.1| unknown [Lotus japonicus]
          Length = 98

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 35/64 (54%), Positives = 40/64 (62%)
 Frame = -1

Query: 210 WLTLPSFTSTINPTLVAKEISRTHNHSIQKSETTTTTALKWVLRCCPQLPRSLVQKLFRL 31
           W TLP  T+T+                 Q S +T+TTALKWVLRCCP LPR+LV KLFRL
Sbjct: 33  WHTLPPVTATVK------------GQGNQVSSSTSTTALKWVLRCCPNLPRTLVHKLFRL 80

Query: 30  RQVR 19
           RQVR
Sbjct: 81  RQVR 84