BLASTX nr result

ID: Akebia25_contig00054970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00054970
         (353 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004504032.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
ref|XP_006585305.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_004296690.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07
gb|EXB80843.1| hypothetical protein L484_020101 [Morus notabilis]      59   9e-07
ref|XP_006428072.1| hypothetical protein CICLE_v10025440mg [Citr...    57   3e-06
ref|XP_004953934.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_004953933.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_004237613.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_002532046.1| pentatricopeptide repeat-containing protein,...    57   3e-06
ref|XP_007212021.1| hypothetical protein PRUPE_ppa004899mg [Prun...    56   5e-06
ref|XP_003630096.1| Pentatricopeptide repeat-containing protein ...    56   6e-06
ref|NP_001190970.1| pentatricopeptide repeat-containing protein ...    56   6e-06
ref|NP_195672.1| pentatricopeptide repeat-containing protein [Ar...    56   6e-06
gb|EYU31068.1| hypothetical protein MIMGU_mgv1a024034mg [Mimulus...    55   8e-06

>ref|XP_004504032.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X1 [Cicer arietinum]
           gi|502140047|ref|XP_004504033.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X2 [Cicer arietinum]
          Length = 477

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/53 (62%), Positives = 38/53 (71%)
 Frame = +1

Query: 1   LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNNREARSANSQGRAKT 159
           LL KLLK+MDKDG++PNK+FFL+ALGA GSS   S S N    S N Q  AKT
Sbjct: 421 LLDKLLKHMDKDGVIPNKRFFLDALGAIGSSTEKSGSANAGTDSKNPQKFAKT 473


>ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic [Vitis vinifera]
           gi|296082481|emb|CBI21486.3| unnamed protein product
           [Vitis vinifera]
          Length = 489

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 32/53 (60%), Positives = 36/53 (67%)
 Frame = +1

Query: 1   LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNNREARSANSQGRAKT 159
           LL+KLLK MD DGI+PNK+FFLEALGAFGSS A  ES          +  AKT
Sbjct: 437 LLEKLLKLMDSDGILPNKRFFLEALGAFGSSPASQESAGSTTGLTRPRNSAKT 489


>ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Glycine max]
          Length = 503

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 32/50 (64%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1   LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNN--REARSANSQ 144
           LL KLLK+MDKDGIVPNK+FFL+ALGA  S  A SES N   ++++ANS+
Sbjct: 412 LLDKLLKHMDKDGIVPNKRFFLDALGAVASLPANSESANAATDSKTANSE 461


>ref|XP_006585305.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Glycine max]
          Length = 526

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/50 (62%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
 Frame = +1

Query: 1   LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNN--REARSANSQ 144
           LL KLLK+MDKDGI+PNK+FFL+ALGA  S  A SES N   ++ +ANS+
Sbjct: 421 LLDKLLKHMDKDGIIPNKRFFLDALGAVASLPANSESANAATDSNTANSE 470


>ref|XP_004296690.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 420

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 30/39 (76%), Positives = 32/39 (82%)
 Frame = +1

Query: 1   LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNN 117
           LL KLLK MDKDGIVPNK+FFLEALGAF SS   SES +
Sbjct: 367 LLDKLLKSMDKDGIVPNKRFFLEALGAFLSSTGNSESGS 405


>gb|EXB80843.1| hypothetical protein L484_020101 [Morus notabilis]
          Length = 485

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/53 (56%), Positives = 37/53 (69%)
 Frame = +1

Query: 1   LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNNREARSANSQGRAKT 159
           LL  LL++M+KDGIVPNK+FFLEALGAF SS A   S +  A S+  +   KT
Sbjct: 433 LLGNLLRHMEKDGIVPNKRFFLEALGAFCSSNASPVSMSATAASSRPENSVKT 485


>ref|XP_006428072.1| hypothetical protein CICLE_v10025440mg [Citrus clementina]
           gi|568819570|ref|XP_006464322.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Citrus sinensis]
           gi|557530062|gb|ESR41312.1| hypothetical protein
           CICLE_v10025440mg [Citrus clementina]
          Length = 500

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/53 (54%), Positives = 38/53 (71%)
 Frame = +1

Query: 1   LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNNREARSANSQGRAKT 159
           L+QKLLK M+++GIVPNK+FFLEAL  F SS AGS+S + +     S   AK+
Sbjct: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRSLSTAKS 500


>ref|XP_004953934.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X2 [Setaria italica]
          Length = 500

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 4/57 (7%)
 Frame = +1

Query: 1   LLQKLLKYMDKDGIVPNKKFFLEALGAFGSS----RAGSESNNREARSANSQGRAKT 159
           L+QKLLK M+K GIVPNKKFFL+AL AFG+S    R  S +N+    S++S G ++T
Sbjct: 428 LVQKLLKRMNKQGIVPNKKFFLDALEAFGTSERKPRTSSATNSASKPSSDSAGDSET 484


>ref|XP_004953933.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X1 [Setaria italica]
          Length = 511

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 4/57 (7%)
 Frame = +1

Query: 1   LLQKLLKYMDKDGIVPNKKFFLEALGAFGSS----RAGSESNNREARSANSQGRAKT 159
           L+QKLLK M+K GIVPNKKFFL+AL AFG+S    R  S +N+    S++S G ++T
Sbjct: 428 LVQKLLKRMNKQGIVPNKKFFLDALEAFGTSERKPRTSSATNSASKPSSDSAGDSQT 484


>ref|XP_004237613.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Solanum lycopersicum]
          Length = 478

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/31 (80%), Positives = 30/31 (96%)
 Frame = +1

Query: 1   LLQKLLKYMDKDGIVPNKKFFLEALGAFGSS 93
           L+QKLL YMD+DGI+PNKKFFL+ALGAFGS+
Sbjct: 428 LVQKLLTYMDEDGIIPNKKFFLDALGAFGSA 458


>ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528289|gb|EEF30336.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 478

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/44 (59%), Positives = 35/44 (79%)
 Frame = +1

Query: 1   LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNNREARS 132
           L+QKLLK+MD+DGI+PNK+FFL+ALGAF S  A S +    A++
Sbjct: 435 LVQKLLKHMDRDGIIPNKRFFLDALGAFKSLPASSGNQQNNAKT 478


>ref|XP_007212021.1| hypothetical protein PRUPE_ppa004899mg [Prunus persica]
           gi|462407886|gb|EMJ13220.1| hypothetical protein
           PRUPE_ppa004899mg [Prunus persica]
          Length = 486

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 31/53 (58%), Positives = 34/53 (64%)
 Frame = +1

Query: 1   LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNNREARSANSQGRAKT 159
           LL+KLLK MDKDGIVPNK+FFLEALGAF SS     S       +  Q   KT
Sbjct: 434 LLEKLLKCMDKDGIVPNKRFFLEALGAFFSSPGSPGSVTATTGLSRPQDGTKT 486


>ref|XP_003630096.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524118|gb|AET04572.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 635

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/48 (58%), Positives = 33/48 (68%)
 Frame = +1

Query: 1   LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNNREARSANSQ 144
           LL KLLK MDKD ++PNK+FFL+ALGA GSS   S S N    S+  Q
Sbjct: 420 LLDKLLKQMDKDSVIPNKRFFLDALGAIGSSTEKSGSANAGTGSSRPQ 467


>ref|NP_001190970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332661695|gb|AEE87095.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 510

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
 Frame = +1

Query: 4   LQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNNREA-RSANSQGRAK 156
           +Q L+K M+KDGIVPNK+FFLEAL  FGS   GS S NR++ RS+ S+   K
Sbjct: 437 VQILMKKMEKDGIVPNKRFFLEALEVFGSRLPGSGSENRKSTRSSRSRDSPK 488


>ref|NP_195672.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75266408|sp|Q9SV96.1|PP358_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g39620, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2453; Flags: Precursor
           gi|5042178|emb|CAB44697.1| putative protein [Arabidopsis
           thaliana] gi|7270946|emb|CAB80625.1| putative protein
           [Arabidopsis thaliana] gi|58013022|gb|AAW62964.1|
           chloroplast embryo-defective 2453 [Arabidopsis thaliana]
           gi|332661694|gb|AEE87094.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 563

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
 Frame = +1

Query: 4   LQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNNREA-RSANSQGRAK 156
           +Q L+K M+KDGIVPNK+FFLEAL  FGS   GS S NR++ RS+ S+   K
Sbjct: 437 VQILMKKMEKDGIVPNKRFFLEALEVFGSRLPGSGSENRKSTRSSRSRDSPK 488


>gb|EYU31068.1| hypothetical protein MIMGU_mgv1a024034mg [Mimulus guttatus]
          Length = 496

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/41 (63%), Positives = 32/41 (78%)
 Frame = +1

Query: 1   LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNNRE 123
           LL KL+  MDKDGI+PNK+FFL+ALGA GS   G +S NR+
Sbjct: 442 LLGKLVVCMDKDGIIPNKRFFLDALGAIGSFHDGKKSTNRK 482


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