BLASTX nr result
ID: Akebia25_contig00054970
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00054970
(353 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004504032.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi... 62 6e-08
ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_006585305.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07
ref|XP_004296690.1| PREDICTED: pentatricopeptide repeat-containi... 59 5e-07
gb|EXB80843.1| hypothetical protein L484_020101 [Morus notabilis] 59 9e-07
ref|XP_006428072.1| hypothetical protein CICLE_v10025440mg [Citr... 57 3e-06
ref|XP_004953934.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_004953933.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_004237613.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_002532046.1| pentatricopeptide repeat-containing protein,... 57 3e-06
ref|XP_007212021.1| hypothetical protein PRUPE_ppa004899mg [Prun... 56 5e-06
ref|XP_003630096.1| Pentatricopeptide repeat-containing protein ... 56 6e-06
ref|NP_001190970.1| pentatricopeptide repeat-containing protein ... 56 6e-06
ref|NP_195672.1| pentatricopeptide repeat-containing protein [Ar... 56 6e-06
gb|EYU31068.1| hypothetical protein MIMGU_mgv1a024034mg [Mimulus... 55 8e-06
>ref|XP_004504032.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like isoform X1 [Cicer arietinum]
gi|502140047|ref|XP_004504033.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like isoform X2 [Cicer arietinum]
Length = 477
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/53 (62%), Positives = 38/53 (71%)
Frame = +1
Query: 1 LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNNREARSANSQGRAKT 159
LL KLLK+MDKDG++PNK+FFL+ALGA GSS S S N S N Q AKT
Sbjct: 421 LLDKLLKHMDKDGVIPNKRFFLDALGAIGSSTEKSGSANAGTDSKNPQKFAKT 473
>ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Vitis vinifera]
gi|296082481|emb|CBI21486.3| unnamed protein product
[Vitis vinifera]
Length = 489
Score = 62.4 bits (150), Expect = 6e-08
Identities = 32/53 (60%), Positives = 36/53 (67%)
Frame = +1
Query: 1 LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNNREARSANSQGRAKT 159
LL+KLLK MD DGI+PNK+FFLEALGAFGSS A ES + AKT
Sbjct: 437 LLEKLLKLMDSDGILPNKRFFLEALGAFGSSPASQESAGSTTGLTRPRNSAKT 489
>ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Glycine max]
Length = 503
Score = 61.6 bits (148), Expect = 1e-07
Identities = 32/50 (64%), Positives = 40/50 (80%), Gaps = 2/50 (4%)
Frame = +1
Query: 1 LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNN--REARSANSQ 144
LL KLLK+MDKDGIVPNK+FFL+ALGA S A SES N ++++ANS+
Sbjct: 412 LLDKLLKHMDKDGIVPNKRFFLDALGAVASLPANSESANAATDSKTANSE 461
>ref|XP_006585305.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Glycine max]
Length = 526
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/50 (62%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
Frame = +1
Query: 1 LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNN--REARSANSQ 144
LL KLLK+MDKDGI+PNK+FFL+ALGA S A SES N ++ +ANS+
Sbjct: 421 LLDKLLKHMDKDGIIPNKRFFLDALGAVASLPANSESANAATDSNTANSE 470
>ref|XP_004296690.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 420
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = +1
Query: 1 LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNN 117
LL KLLK MDKDGIVPNK+FFLEALGAF SS SES +
Sbjct: 367 LLDKLLKSMDKDGIVPNKRFFLEALGAFLSSTGNSESGS 405
>gb|EXB80843.1| hypothetical protein L484_020101 [Morus notabilis]
Length = 485
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/53 (56%), Positives = 37/53 (69%)
Frame = +1
Query: 1 LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNNREARSANSQGRAKT 159
LL LL++M+KDGIVPNK+FFLEALGAF SS A S + A S+ + KT
Sbjct: 433 LLGNLLRHMEKDGIVPNKRFFLEALGAFCSSNASPVSMSATAASSRPENSVKT 485
>ref|XP_006428072.1| hypothetical protein CICLE_v10025440mg [Citrus clementina]
gi|568819570|ref|XP_006464322.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Citrus sinensis]
gi|557530062|gb|ESR41312.1| hypothetical protein
CICLE_v10025440mg [Citrus clementina]
Length = 500
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = +1
Query: 1 LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNNREARSANSQGRAKT 159
L+QKLLK M+++GIVPNK+FFLEAL F SS AGS+S + + S AK+
Sbjct: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRSLSTAKS 500
>ref|XP_004953934.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like isoform X2 [Setaria italica]
Length = 500
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 4/57 (7%)
Frame = +1
Query: 1 LLQKLLKYMDKDGIVPNKKFFLEALGAFGSS----RAGSESNNREARSANSQGRAKT 159
L+QKLLK M+K GIVPNKKFFL+AL AFG+S R S +N+ S++S G ++T
Sbjct: 428 LVQKLLKRMNKQGIVPNKKFFLDALEAFGTSERKPRTSSATNSASKPSSDSAGDSET 484
>ref|XP_004953933.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like isoform X1 [Setaria italica]
Length = 511
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/57 (54%), Positives = 41/57 (71%), Gaps = 4/57 (7%)
Frame = +1
Query: 1 LLQKLLKYMDKDGIVPNKKFFLEALGAFGSS----RAGSESNNREARSANSQGRAKT 159
L+QKLLK M+K GIVPNKKFFL+AL AFG+S R S +N+ S++S G ++T
Sbjct: 428 LVQKLLKRMNKQGIVPNKKFFLDALEAFGTSERKPRTSSATNSASKPSSDSAGDSQT 484
>ref|XP_004237613.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Solanum lycopersicum]
Length = 478
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/31 (80%), Positives = 30/31 (96%)
Frame = +1
Query: 1 LLQKLLKYMDKDGIVPNKKFFLEALGAFGSS 93
L+QKLL YMD+DGI+PNKKFFL+ALGAFGS+
Sbjct: 428 LVQKLLTYMDEDGIIPNKKFFLDALGAFGSA 458
>ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528289|gb|EEF30336.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 478
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/44 (59%), Positives = 35/44 (79%)
Frame = +1
Query: 1 LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNNREARS 132
L+QKLLK+MD+DGI+PNK+FFL+ALGAF S A S + A++
Sbjct: 435 LVQKLLKHMDRDGIIPNKRFFLDALGAFKSLPASSGNQQNNAKT 478
>ref|XP_007212021.1| hypothetical protein PRUPE_ppa004899mg [Prunus persica]
gi|462407886|gb|EMJ13220.1| hypothetical protein
PRUPE_ppa004899mg [Prunus persica]
Length = 486
Score = 56.2 bits (134), Expect = 5e-06
Identities = 31/53 (58%), Positives = 34/53 (64%)
Frame = +1
Query: 1 LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNNREARSANSQGRAKT 159
LL+KLLK MDKDGIVPNK+FFLEALGAF SS S + Q KT
Sbjct: 434 LLEKLLKCMDKDGIVPNKRFFLEALGAFFSSPGSPGSVTATTGLSRPQDGTKT 486
>ref|XP_003630096.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524118|gb|AET04572.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 635
Score = 55.8 bits (133), Expect = 6e-06
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = +1
Query: 1 LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNNREARSANSQ 144
LL KLLK MDKD ++PNK+FFL+ALGA GSS S S N S+ Q
Sbjct: 420 LLDKLLKQMDKDSVIPNKRFFLDALGAIGSSTEKSGSANAGTGSSRPQ 467
>ref|NP_001190970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332661695|gb|AEE87095.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +1
Query: 4 LQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNNREA-RSANSQGRAK 156
+Q L+K M+KDGIVPNK+FFLEAL FGS GS S NR++ RS+ S+ K
Sbjct: 437 VQILMKKMEKDGIVPNKRFFLEALEVFGSRLPGSGSENRKSTRSSRSRDSPK 488
>ref|NP_195672.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75266408|sp|Q9SV96.1|PP358_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g39620, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2453; Flags: Precursor
gi|5042178|emb|CAB44697.1| putative protein [Arabidopsis
thaliana] gi|7270946|emb|CAB80625.1| putative protein
[Arabidopsis thaliana] gi|58013022|gb|AAW62964.1|
chloroplast embryo-defective 2453 [Arabidopsis thaliana]
gi|332661694|gb|AEE87094.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 563
Score = 55.8 bits (133), Expect = 6e-06
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +1
Query: 4 LQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNNREA-RSANSQGRAK 156
+Q L+K M+KDGIVPNK+FFLEAL FGS GS S NR++ RS+ S+ K
Sbjct: 437 VQILMKKMEKDGIVPNKRFFLEALEVFGSRLPGSGSENRKSTRSSRSRDSPK 488
>gb|EYU31068.1| hypothetical protein MIMGU_mgv1a024034mg [Mimulus guttatus]
Length = 496
Score = 55.5 bits (132), Expect = 8e-06
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = +1
Query: 1 LLQKLLKYMDKDGIVPNKKFFLEALGAFGSSRAGSESNNRE 123
LL KL+ MDKDGI+PNK+FFL+ALGA GS G +S NR+
Sbjct: 442 LLGKLVVCMDKDGIIPNKRFFLDALGAIGSFHDGKKSTNRK 482