BLASTX nr result
ID: Akebia25_contig00054930
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00054930
(322 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFB18341.1| RNA polymerase beta subunit, partial [Kingia aust... 89 5e-16
emb|CBI27358.3| unnamed protein product [Vitis vinifera] 88 1e-15
ref|YP_002836082.1| RNA polymerase beta subunit [Megaleranthis s... 88 1e-15
ref|YP_784378.1| RNA polymerase beta subunit [Drimys granadensis... 87 2e-15
ref|YP_001294090.1| RNA polymerase beta subunit [Chloranthus spi... 87 2e-15
gb|AGE93190.1| RNA polymerase beta subunit [Calectasia narragara] 87 3e-15
sp|Q7YJX8.1|RPOB_CALFG RecName: Full=DNA-directed RNA polymerase... 87 3e-15
gb|AFB18353.1| RNA polymerase beta subunit, partial [Sparganium ... 87 3e-15
ref|YP_740642.1| RNA polymerase beta subunit [Nandina domestica]... 87 3e-15
ref|NP_862746.2| RNA polymerase beta subunit [Calycanthus florid... 87 3e-15
emb|CAI99072.1| RNA polymerase beta subunit [Arabidopsis thaliana] 86 4e-15
emb|CAI99086.1| RNA polymerase beta subunit [Arabidopsis thaliana] 86 4e-15
ref|NP_051051.1| RNA polymerase beta subunit [Arabidopsis thalia... 86 4e-15
ref|YP_007476039.1| RNA polymerase beta subunit [Dasypogon brome... 86 4e-15
ref|XP_002886863.1| hypothetical protein ARALYDRAFT_893971 [Arab... 86 4e-15
ref|YP_001123454.1| RNA polymerase beta subunit [Crucihimalaya w... 86 4e-15
ref|YP_001123365.1| RNA polymerase beta subunit [Capsella bursa-... 86 4e-15
ref|YP_001122938.1| RNA polymerase beta subunit [Aethionema cord... 86 4e-15
emb|CAA74024.1| DNA-dependent RNA polymerase subunit beta [Arabi... 86 4e-15
gb|AHE41617.1| RNA polymerase beta subunit protein (chloroplast)... 86 5e-15
>gb|AFB18341.1| RNA polymerase beta subunit, partial [Kingia australis]
gi|392841330|gb|AFM83285.1| RNA polymerase beta subunit
(chloroplast) [Kingia australis]
Length = 1070
Score = 89.4 bits (220), Expect = 5e-16
Identities = 48/73 (65%), Positives = 52/73 (71%)
Frame = -1
Query: 307 ELDHNRILVYTSAII*DWGRRLELGIES*AMIWAHVCSKQKIFILAPSLAMDLNLREIIV 128
ELDHNRI VYTS +I DWG RLEL I+ A IWA V KQKI IL S AM NLREI+
Sbjct: 137 ELDHNRISVYTSTVISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILD 196
Query: 127 KVCYLEIFLSCPS 89
VCY EIFLS P+
Sbjct: 197 NVCYPEIFLSFPN 209
>emb|CBI27358.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 87.8 bits (216), Expect = 1e-15
Identities = 46/70 (65%), Positives = 50/70 (71%)
Frame = -1
Query: 307 ELDHNRILVYTSAII*DWGRRLELGIES*AMIWAHVCSKQKIFILAPSLAMDLNLREIIV 128
ELDHN I VYT I+ DWG RLEL I+ A IW+HV KQKI IL S AM NLREI+
Sbjct: 57 ELDHNGISVYTGTIVSDWGGRLELEIDRKARIWSHVSRKQKISILVLSSAMGSNLREILE 116
Query: 127 KVCYLEIFLS 98
VCYLEIFLS
Sbjct: 117 NVCYLEIFLS 126
>ref|YP_002836082.1| RNA polymerase beta subunit [Megaleranthis saniculifolia]
gi|226933874|gb|ACO92007.1| RNA polymerase beta subunit
[Megaleranthis saniculifolia]
Length = 1071
Score = 87.8 bits (216), Expect = 1e-15
Identities = 48/73 (65%), Positives = 50/73 (68%)
Frame = -1
Query: 307 ELDHNRILVYTSAII*DWGRRLELGIES*AMIWAHVCSKQKIFILAPSLAMDLNLREIIV 128
ELDHN I VYT II DWG R EL I+ A IWA V KQKI IL PS AM NLREII
Sbjct: 137 ELDHNGISVYTGTIISDWGGRSELEIDRKARIWARVSRKQKISILVPSSAMGSNLREIID 196
Query: 127 KVCYLEIFLSCPS 89
VCY EIFLS P+
Sbjct: 197 NVCYPEIFLSFPN 209
>ref|YP_784378.1| RNA polymerase beta subunit [Drimys granadensis]
gi|122164449|sp|Q06H05.1|RPOB_DRIGR RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|112032654|gb|ABH88289.1| RNA polymerase beta subunit
[Drimys granadensis]
Length = 1071
Score = 87.4 bits (215), Expect = 2e-15
Identities = 47/73 (64%), Positives = 51/73 (69%)
Frame = -1
Query: 307 ELDHNRILVYTSAII*DWGRRLELGIES*AMIWAHVCSKQKIFILAPSLAMDLNLREIIV 128
ELDHN I VYT +II DWG R EL I+ A IWA V KQKI IL PS AM NLREI+
Sbjct: 137 ELDHNGISVYTGSIISDWGGRSELEIDRKARIWARVSRKQKISILVPSSAMGSNLREILD 196
Query: 127 KVCYLEIFLSCPS 89
VCY EIFLS P+
Sbjct: 197 NVCYPEIFLSFPN 209
>ref|YP_001294090.1| RNA polymerase beta subunit [Chloranthus spicatus]
gi|158513759|sp|A6MMB4.1|RPOB_CHLSC RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|146744180|gb|ABQ43252.1| RNA polymerase beta subunit
[Chloranthus spicatus]
Length = 1070
Score = 87.0 bits (214), Expect = 2e-15
Identities = 47/73 (64%), Positives = 50/73 (68%)
Frame = -1
Query: 307 ELDHNRILVYTSAII*DWGRRLELGIES*AMIWAHVCSKQKIFILAPSLAMDLNLREIIV 128
ELDHN I VYT II DWG R EL I+ A IWA V KQKI IL PS AM NLREI+
Sbjct: 137 ELDHNGISVYTGTIISDWGGRSELEIDRKARIWARVSRKQKISILVPSSAMGSNLREILD 196
Query: 127 KVCYLEIFLSCPS 89
VCY EIFLS P+
Sbjct: 197 NVCYPEIFLSFPN 209
>gb|AGE93190.1| RNA polymerase beta subunit [Calectasia narragara]
Length = 1074
Score = 86.7 bits (213), Expect = 3e-15
Identities = 47/73 (64%), Positives = 51/73 (69%)
Frame = -1
Query: 307 ELDHNRILVYTSAII*DWGRRLELGIES*AMIWAHVCSKQKIFILAPSLAMDLNLREIIV 128
ELDHN+I VYTS II DWG R EL I+ A IWA V KQKI IL S AM NLREI+
Sbjct: 137 ELDHNKISVYTSTIISDWGGRSELEIDRKARIWARVSRKQKISILVLSSAMGSNLREIVD 196
Query: 127 KVCYLEIFLSCPS 89
VCY EIFLS P+
Sbjct: 197 NVCYPEIFLSFPN 209
>sp|Q7YJX8.1|RPOB_CALFG RecName: Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|32399371|emb|CAD28713.1| RNA polymerase beta subunit
[Calycanthus floridus var. glaucus]
Length = 1060
Score = 86.7 bits (213), Expect = 3e-15
Identities = 47/73 (64%), Positives = 50/73 (68%)
Frame = -1
Query: 307 ELDHNRILVYTSAII*DWGRRLELGIES*AMIWAHVCSKQKIFILAPSLAMDLNLREIIV 128
ELDHN I VYT II DWG R EL I+ A IWA V KQKI IL PS AM NLREI+
Sbjct: 129 ELDHNGISVYTGTIISDWGGRPELEIDRKARIWARVSRKQKISILVPSSAMGSNLREILD 188
Query: 127 KVCYLEIFLSCPS 89
VCY EIFLS P+
Sbjct: 189 NVCYPEIFLSFPN 201
>gb|AFB18353.1| RNA polymerase beta subunit, partial [Sparganium eurycarpum]
Length = 1083
Score = 86.7 bits (213), Expect = 3e-15
Identities = 48/73 (65%), Positives = 51/73 (69%)
Frame = -1
Query: 307 ELDHNRILVYTSAII*DWGRRLELGIES*AMIWAHVCSKQKIFILAPSLAMDLNLREIIV 128
ELDHN I VYTS II DWG R EL I+ A IWA V KQKI IL S AM LNLREI+
Sbjct: 148 ELDHNGISVYTSTIISDWGGRPELEIDRKARIWARVSRKQKISILVLSSAMGLNLREILD 207
Query: 127 KVCYLEIFLSCPS 89
VCY EIFLS P+
Sbjct: 208 NVCYPEIFLSFPN 220
>ref|YP_740642.1| RNA polymerase beta subunit [Nandina domestica]
gi|122165969|sp|Q09FW9.1|RPOB_NANDO RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|114054462|gb|ABI49855.1| RNA polymerase beta subunit
[Nandina domestica]
Length = 1070
Score = 86.7 bits (213), Expect = 3e-15
Identities = 47/73 (64%), Positives = 50/73 (68%)
Frame = -1
Query: 307 ELDHNRILVYTSAII*DWGRRLELGIES*AMIWAHVCSKQKIFILAPSLAMDLNLREIIV 128
ELDHN I VYT II DWG R EL I+ A IWA V KQKI IL PS AM NL+EII
Sbjct: 137 ELDHNGISVYTGTIISDWGGRSELEIDRKARIWARVSRKQKISILVPSSAMGSNLKEIID 196
Query: 127 KVCYLEIFLSCPS 89
VCY EIFLS P+
Sbjct: 197 NVCYPEIFLSFPN 209
>ref|NP_862746.2| RNA polymerase beta subunit [Calycanthus floridus var. glaucus]
Length = 1069
Score = 86.7 bits (213), Expect = 3e-15
Identities = 47/73 (64%), Positives = 50/73 (68%)
Frame = -1
Query: 307 ELDHNRILVYTSAII*DWGRRLELGIES*AMIWAHVCSKQKIFILAPSLAMDLNLREIIV 128
ELDHN I VYT II DWG R EL I+ A IWA V KQKI IL PS AM NLREI+
Sbjct: 138 ELDHNGISVYTGTIISDWGGRPELEIDRKARIWARVSRKQKISILVPSSAMGSNLREILD 197
Query: 127 KVCYLEIFLSCPS 89
VCY EIFLS P+
Sbjct: 198 NVCYPEIFLSFPN 210
>emb|CAI99072.1| RNA polymerase beta subunit [Arabidopsis thaliana]
Length = 267
Score = 86.3 bits (212), Expect = 4e-15
Identities = 47/70 (67%), Positives = 49/70 (70%)
Frame = -1
Query: 307 ELDHNRILVYTSAII*DWGRRLELGIES*AMIWAHVCSKQKIFILAPSLAMDLNLREIIV 128
ELDHN I VYT II DWG RLEL I+ A IWA V KQKI IL S AM LNLREI+
Sbjct: 26 ELDHNGISVYTGTIISDWGGRLELEIDKKARIWARVSRKQKISILVLSSAMGLNLREILE 85
Query: 127 KVCYLEIFLS 98
VCY EIFLS
Sbjct: 86 NVCYPEIFLS 95
>emb|CAI99086.1| RNA polymerase beta subunit [Arabidopsis thaliana]
Length = 254
Score = 86.3 bits (212), Expect = 4e-15
Identities = 47/70 (67%), Positives = 49/70 (70%)
Frame = -1
Query: 307 ELDHNRILVYTSAII*DWGRRLELGIES*AMIWAHVCSKQKIFILAPSLAMDLNLREIIV 128
ELDHN I VYT II DWG RLEL I+ A IWA V KQKI IL S AM LNLREI+
Sbjct: 26 ELDHNGISVYTGTIISDWGGRLELEIDKKARIWARVSRKQKISILVLSSAMGLNLREILE 85
Query: 127 KVCYLEIFLS 98
VCY EIFLS
Sbjct: 86 NVCYPEIFLS 95
>ref|NP_051051.1| RNA polymerase beta subunit [Arabidopsis thaliana]
gi|332278246|sp|P50546.4|RPOB_ARATH RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|5881686|dbj|BAA84377.1| RNA polymerase beta subunit
[Arabidopsis thaliana]
Length = 1072
Score = 86.3 bits (212), Expect = 4e-15
Identities = 47/70 (67%), Positives = 49/70 (70%)
Frame = -1
Query: 307 ELDHNRILVYTSAII*DWGRRLELGIES*AMIWAHVCSKQKIFILAPSLAMDLNLREIIV 128
ELDHN I VYT II DWG RLEL I+ A IWA V KQKI IL S AM LNLREI+
Sbjct: 137 ELDHNGISVYTGTIISDWGGRLELEIDKKARIWARVSRKQKISILVLSSAMGLNLREILE 196
Query: 127 KVCYLEIFLS 98
VCY EIFLS
Sbjct: 197 NVCYPEIFLS 206
>ref|YP_007476039.1| RNA polymerase beta subunit [Dasypogon bromeliifolius]
gi|376008242|gb|AFB18330.1| RNA polymerase beta subunit
[Dasypogon bromeliifolius] gi|449326523|gb|AGE93104.1|
RNA polymerase beta subunit [Dasypogon bromeliifolius]
Length = 1070
Score = 86.3 bits (212), Expect = 4e-15
Identities = 47/73 (64%), Positives = 51/73 (69%)
Frame = -1
Query: 307 ELDHNRILVYTSAII*DWGRRLELGIES*AMIWAHVCSKQKIFILAPSLAMDLNLREIIV 128
ELDHN+I VYTS II DWG R EL I+ A IWA V KQKI IL S AM NLREI+
Sbjct: 137 ELDHNKISVYTSTIISDWGGRSELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILD 196
Query: 127 KVCYLEIFLSCPS 89
VCY EIFLS P+
Sbjct: 197 NVCYPEIFLSFPN 209
>ref|XP_002886863.1| hypothetical protein ARALYDRAFT_893971 [Arabidopsis lyrata subsp.
lyrata] gi|297332704|gb|EFH63122.1| hypothetical protein
ARALYDRAFT_893971 [Arabidopsis lyrata subsp. lyrata]
Length = 1763
Score = 86.3 bits (212), Expect = 4e-15
Identities = 47/70 (67%), Positives = 49/70 (70%)
Frame = -1
Query: 307 ELDHNRILVYTSAII*DWGRRLELGIES*AMIWAHVCSKQKIFILAPSLAMDLNLREIIV 128
ELDHN I VYT II DWG RLEL I+ A IWA V KQKI IL S AM LNLREI+
Sbjct: 137 ELDHNGISVYTGTIISDWGGRLELEIDKKARIWARVSRKQKISILVLSSAMGLNLREILE 196
Query: 127 KVCYLEIFLS 98
VCY EIFLS
Sbjct: 197 NVCYPEIFLS 206
>ref|YP_001123454.1| RNA polymerase beta subunit [Crucihimalaya wallichii]
gi|158513964|sp|A4QKS3.1|RPOB_CRUWA RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|134286655|dbj|BAF50278.1| RNA polymerase beta subunit
[Crucihimalaya wallichii]
Length = 1072
Score = 86.3 bits (212), Expect = 4e-15
Identities = 47/70 (67%), Positives = 49/70 (70%)
Frame = -1
Query: 307 ELDHNRILVYTSAII*DWGRRLELGIES*AMIWAHVCSKQKIFILAPSLAMDLNLREIIV 128
ELDHN I VYT II DWG RLEL I+ A IWA V KQKI IL S AM LNLREI+
Sbjct: 137 ELDHNGISVYTGTIISDWGGRLELEIDKKARIWARVSRKQKISILVLSSAMGLNLREILE 196
Query: 127 KVCYLEIFLS 98
VCY EIFLS
Sbjct: 197 NVCYPEIFLS 206
>ref|YP_001123365.1| RNA polymerase beta subunit [Capsella bursa-pastoris]
gi|158513957|sp|A4QKI4.1|RPOB_CAPBU RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|134286565|dbj|BAF50189.1| RNA polymerase beta subunit
[Capsella bursa-pastoris]
Length = 1072
Score = 86.3 bits (212), Expect = 4e-15
Identities = 47/70 (67%), Positives = 49/70 (70%)
Frame = -1
Query: 307 ELDHNRILVYTSAII*DWGRRLELGIES*AMIWAHVCSKQKIFILAPSLAMDLNLREIIV 128
ELDHN I VYT II DWG RLEL I+ A IWA V KQKI IL S AM LNLREI+
Sbjct: 137 ELDHNGISVYTGTIISDWGGRLELEIDKKARIWARVSRKQKISILVLSSAMGLNLREILE 196
Query: 127 KVCYLEIFLS 98
VCY EIFLS
Sbjct: 197 NVCYPEIFLS 206
>ref|YP_001122938.1| RNA polymerase beta subunit [Aethionema cordifolium]
gi|158513599|sp|A4QJA7.1|RPOB_AETCO RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|134286133|dbj|BAF49762.1| RNA polymerase beta subunit
[Aethionema cordifolium]
Length = 1073
Score = 86.3 bits (212), Expect = 4e-15
Identities = 47/70 (67%), Positives = 49/70 (70%)
Frame = -1
Query: 307 ELDHNRILVYTSAII*DWGRRLELGIES*AMIWAHVCSKQKIFILAPSLAMDLNLREIIV 128
ELDHN I VYT II DWG RLEL I+ A IWA V KQKI IL S AM LNLREI+
Sbjct: 137 ELDHNGISVYTGTIISDWGGRLELEIDKKARIWARVSRKQKISILVLSSAMGLNLREILE 196
Query: 127 KVCYLEIFLS 98
VCY EIFLS
Sbjct: 197 NVCYPEIFLS 206
>emb|CAA74024.1| DNA-dependent RNA polymerase subunit beta [Arabidopsis thaliana]
Length = 1078
Score = 86.3 bits (212), Expect = 4e-15
Identities = 47/70 (67%), Positives = 49/70 (70%)
Frame = -1
Query: 307 ELDHNRILVYTSAII*DWGRRLELGIES*AMIWAHVCSKQKIFILAPSLAMDLNLREIIV 128
ELDHN I VYT II DWG RLEL I+ A IWA V KQKI IL S AM LNLREI+
Sbjct: 143 ELDHNGISVYTGTIISDWGGRLELEIDKKARIWARVSRKQKISILVLSSAMGLNLREILE 202
Query: 127 KVCYLEIFLS 98
VCY EIFLS
Sbjct: 203 NVCYPEIFLS 212
>gb|AHE41617.1| RNA polymerase beta subunit protein (chloroplast) [Hamamelis
mollis]
Length = 1070
Score = 85.9 bits (211), Expect = 5e-15
Identities = 47/70 (67%), Positives = 49/70 (70%)
Frame = -1
Query: 307 ELDHNRILVYTSAII*DWGRRLELGIES*AMIWAHVCSKQKIFILAPSLAMDLNLREIIV 128
ELDHN I VYT II DWG RLEL I+ A IWA V KQKI IL S AM LNLREI+
Sbjct: 137 ELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGLNLREILE 196
Query: 127 KVCYLEIFLS 98
VCY EIFLS
Sbjct: 197 NVCYPEIFLS 206