BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00054829
         (484 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]   220   1e-55
gb|AAF43948.1|AC012188_25 Contains similarity to a hypothetical ...   214   8e-54
ref|NP_172899.1| pentatricopeptide repeat-containing protein [Ar...   214   8e-54
ref|XP_002519368.1| pentatricopeptide repeat-containing protein,...   214   1e-53
ref|XP_004231316.1| PREDICTED: pentatricopeptide repeat-containi...   212   5e-53
ref|XP_006358473.1| PREDICTED: pentatricopeptide repeat-containi...   211   7e-53
ref|XP_007225169.1| hypothetical protein PRUPE_ppa002283mg [Prun...   207   9e-52
ref|XP_006307192.1| hypothetical protein CARUB_v10008784mg [Caps...   202   5e-50
ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containi...   200   2e-49
ref|XP_006417007.1| hypothetical protein EUTSA_v10009648mg [Eutr...   199   3e-49
ref|XP_004300036.1| PREDICTED: pentatricopeptide repeat-containi...   199   3e-49
ref|XP_002890056.1| hypothetical protein ARALYDRAFT_888825 [Arab...   198   6e-49
ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containi...   198   7e-49
ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containi...   198   7e-49
ref|XP_007023780.1| Pentatricopeptide repeat superfamily protein...   193   2e-47
ref|XP_007023779.1| Pentatricopeptide repeat superfamily protein...   193   2e-47
ref|XP_006575401.1| PREDICTED: pentatricopeptide repeat-containi...   187   1e-45
ref|XP_007148596.1| hypothetical protein PHAVU_006G221900g [Phas...   185   7e-45
ref|XP_006836942.1| hypothetical protein AMTR_s00099p00155770 [A...   176   2e-42
ref|XP_003624026.1| Pentatricopeptide repeat-containing protein ...   176   4e-42

>emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  220 bits (561), Expect = 1e-55
 Identities = 102/158 (64%), Positives = 132/158 (83%)
 Frame = -3

Query: 476 EACHLFGLMPERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGF 297
           +A  LF +MPERNV++WTAM++GY+K  DLE + R F+ MP +SVVSWNAMLSGYAQNG 
Sbjct: 181 QAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGL 240

Query: 296 VKQAMKLFEEMMDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTA 117
            ++ ++LF+EM++AGI+PDETTWVT+IS+CS +GDP LA SLV  L  ++I +NCFV+TA
Sbjct: 241 AEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTA 300

Query: 116 LIDMYAKCGNIETARCIFDEMGVHRNPVSWNAMISAYT 3
           L+DMYAKCG+I  AR IFDE+G +RN V+WNAMISAYT
Sbjct: 301 LLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYT 338



 Score =  123 bits (309), Expect = 2e-26
 Identities = 62/147 (42%), Positives = 99/147 (67%), Gaps = 1/147 (0%)
 Frame = -3

Query: 443 RNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEM 264
           RN V+W AMIS Y++ G+L+++  +FN MP ++VV+WN+M++GYAQNG    A++LF+EM
Sbjct: 325 RNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEM 384

Query: 263 MDA-GIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCGN 87
           + A  + PDE T V++IS+C   G   L   +V  L   +I ++     A+I MY++CG+
Sbjct: 385 ITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGS 444

Query: 86  IETARCIFDEMGVHRNPVSWNAMISAY 6
           +E A+ +F EM   R+ VS+N +IS +
Sbjct: 445 MEDAKRVFQEMAT-RDVVSYNTLISGF 470



 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 40/139 (28%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
 Frame = -3

Query: 422 AMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMMDAGIQP 243
           AMI  YS+ G +E++ RVF EM  + VVS+N ++SG+A +G   +A+ L   M + GI+P
Sbjct: 434 AMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEP 493

Query: 242 DETTWVTIISSCSEQGDPRLAKSLVGLLETRKI-HMNCFVKTALIDMYAKCGNIETARCI 66
           D  T++ ++++CS  G     + +   ++   I H  C     ++D+  + G +E A+  
Sbjct: 494 DRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDHYAC-----MVDLLGRVGELEDAKRT 548

Query: 65  FDEMGVHRNPVSWNAMISA 9
            + M +  +   + ++++A
Sbjct: 549 MERMPMEPHAGVYGSLLNA 567



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
 Frame = -3

Query: 371 VFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMMDAGIQPDETTWVTIISSCSEQGD 192
           +FN   N +V  + +ML  Y+      + + +FE M   G++PD   +  +I S    G 
Sbjct: 56  LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNGGI 115

Query: 191 PRLAKSLVGLLETRKIH-MNCFVKTALIDMYAKCGNIETARCIFDEM-GVHRNPVSWNAM 18
              A  L      +  H  + FV+ A+IDMYA+ G I  AR +FDE+    R    WNAM
Sbjct: 116 GFHAHVL------KLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAM 169

Query: 17  ISAY 6
           +S Y
Sbjct: 170 VSGY 173



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
 Frame = -3

Query: 422 AMISGYSKQGDLENSWRVFNEMPN--KSVVSWNAMLSGYAQNGFVKQAMKLFEEMMDAGI 249
           A+I  Y++ G + ++ +VF+E+P+  + V  WNAM+SGY +     QA  LF+ M +  +
Sbjct: 135 AVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNV 194

Query: 248 QPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCGNIETARC 69
                TW  +++  ++  D   A+     +  R +        A++  YA+ G  E    
Sbjct: 195 ----ITWTAMVTGYAKVKDLEAARRYFDCMPERSV----VSWNAMLSGYAQNGLAEEVLR 246

Query: 68  IFDEM---GVHRNPVSWNAMISA 9
           +FDEM   G+  +  +W  +ISA
Sbjct: 247 LFDEMVNAGIEPDETTWVTVISA 269


>gb|AAF43948.1|AC012188_25 Contains similarity to a hypothetical protein from Arabidopsis
           thaliana gb|AC004044.1 and contains two domains PF|01535
           of unknown function [Arabidopsis thaliana]
          Length = 455

 Score =  214 bits (546), Expect = 8e-54
 Identities = 96/160 (60%), Positives = 131/160 (81%)
 Frame = -3

Query: 482 KDEACHLFGLMPERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQN 303
           K+EAC LF +MPE +VVSWT MI+G++K  DLEN+ + F+ MP KSVVSWNAMLSGYAQN
Sbjct: 98  KEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQN 157

Query: 302 GFVKQAMKLFEEMMDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVK 123
           GF + A++LF +M+  G++P+ETTWV +IS+CS + DP L +SLV L++ +++ +NCFVK
Sbjct: 158 GFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVK 217

Query: 122 TALIDMYAKCGNIETARCIFDEMGVHRNPVSWNAMISAYT 3
           TAL+DM+AKC +I++AR IF+E+G  RN V+WNAMIS YT
Sbjct: 218 TALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYT 257



 Score =  122 bits (307), Expect = 4e-26
 Identities = 59/148 (39%), Positives = 100/148 (67%), Gaps = 1/148 (0%)
 Frame = -3

Query: 446 ERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEE 267
           +RN+V+W AMISGY++ GD+ ++ ++F+ MP ++VVSWN++++GYA NG    A++ FE+
Sbjct: 243 QRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFED 302

Query: 266 MMDAG-IQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCG 90
           M+D G  +PDE T ++++S+C    D  L   +V  +   +I +N     +LI MYA+ G
Sbjct: 303 MIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGG 362

Query: 89  NIETARCIFDEMGVHRNPVSWNAMISAY 6
           N+  A+ +FDEM   R+ VS+N + +A+
Sbjct: 363 NLWEAKRVFDEM-KERDVVSYNTLFTAF 389



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 27/82 (32%), Positives = 51/82 (62%)
 Frame = -3

Query: 440 NVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMM 261
           N   + ++I  Y++ G+L  + RVF+EM  + VVS+N + + +A NG   + + L  +M 
Sbjct: 347 NDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMK 406

Query: 260 DAGIQPDETTWVTIISSCSEQG 195
           D GI+PD  T+ +++++C+  G
Sbjct: 407 DEGIEPDRVTYTSVLTACNRAG 428


>ref|NP_172899.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806395|sp|Q9M9R6.2|PPR43_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g14470 gi|332191047|gb|AEE29168.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 540

 Score =  214 bits (546), Expect = 8e-54
 Identities = 96/160 (60%), Positives = 131/160 (81%)
 Frame = -3

Query: 482 KDEACHLFGLMPERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQN 303
           K+EAC LF +MPE +VVSWT MI+G++K  DLEN+ + F+ MP KSVVSWNAMLSGYAQN
Sbjct: 183 KEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQN 242

Query: 302 GFVKQAMKLFEEMMDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVK 123
           GF + A++LF +M+  G++P+ETTWV +IS+CS + DP L +SLV L++ +++ +NCFVK
Sbjct: 243 GFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVK 302

Query: 122 TALIDMYAKCGNIETARCIFDEMGVHRNPVSWNAMISAYT 3
           TAL+DM+AKC +I++AR IF+E+G  RN V+WNAMIS YT
Sbjct: 303 TALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYT 342



 Score =  122 bits (307), Expect = 4e-26
 Identities = 59/148 (39%), Positives = 100/148 (67%), Gaps = 1/148 (0%)
 Frame = -3

Query: 446 ERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEE 267
           +RN+V+W AMISGY++ GD+ ++ ++F+ MP ++VVSWN++++GYA NG    A++ FE+
Sbjct: 328 QRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFED 387

Query: 266 MMDAG-IQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCG 90
           M+D G  +PDE T ++++S+C    D  L   +V  +   +I +N     +LI MYA+ G
Sbjct: 388 MIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGG 447

Query: 89  NIETARCIFDEMGVHRNPVSWNAMISAY 6
           N+  A+ +FDEM   R+ VS+N + +A+
Sbjct: 448 NLWEAKRVFDEM-KERDVVSYNTLFTAF 474



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 27/82 (32%), Positives = 51/82 (62%)
 Frame = -3

Query: 440 NVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMM 261
           N   + ++I  Y++ G+L  + RVF+EM  + VVS+N + + +A NG   + + L  +M 
Sbjct: 432 NDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMK 491

Query: 260 DAGIQPDETTWVTIISSCSEQG 195
           D GI+PD  T+ +++++C+  G
Sbjct: 492 DEGIEPDRVTYTSVLTACNRAG 513



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 32/122 (26%), Positives = 59/122 (48%)
 Frame = -3

Query: 371 VFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMMDAGIQPDETTWVTIISSCSEQGD 192
           +F+ +   +V   N+M   +++       ++L+E+    GI PD  ++  +I S      
Sbjct: 62  IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG---- 117

Query: 191 PRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCGNIETARCIFDEMGVHRNPVSWNAMIS 12
            R       L+E      + +V+  ++DMY K  ++E+AR +FD++   R    WN MIS
Sbjct: 118 -RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQIS-QRKGSDWNVMIS 175

Query: 11  AY 6
            Y
Sbjct: 176 GY 177


>ref|XP_002519368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541435|gb|EEF42985.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 524

 Score =  214 bits (545), Expect = 1e-53
 Identities = 99/158 (62%), Positives = 130/158 (82%)
 Frame = -3

Query: 476 EACHLFGLMPERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGF 297
           EAC LF + PERNV++WTAM++G+SK  +L+++ + F++MP K++VSWNA++SGYAQNGF
Sbjct: 108 EACSLFSMTPERNVITWTAMVTGFSKIKELDSARKYFDDMPVKNIVSWNAIISGYAQNGF 167

Query: 296 VKQAMKLFEEMMDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTA 117
           V++A+KLF  M+  G+QP+ETTW T+ISSCS  GDP  A+S V LL+ RKI MN FVKTA
Sbjct: 168 VEEALKLFNHMIRLGVQPNETTWATVISSCSSCGDPCRAESFVKLLDKRKIKMNYFVKTA 227

Query: 116 LIDMYAKCGNIETARCIFDEMGVHRNPVSWNAMISAYT 3
           L+DM AKCGN+E AR IF+E+GV RN  +WNAMISAYT
Sbjct: 228 LLDMNAKCGNLEAARGIFNELGVSRNSSTWNAMISAYT 265



 Score =  123 bits (309), Expect = 2e-26
 Identities = 66/147 (44%), Positives = 95/147 (64%), Gaps = 1/147 (0%)
 Frame = -3

Query: 443 RNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEM 264
           RN  +W AMIS Y++ GDL ++  +F++MP +  VSWN M+SGYAQNG    A++LF+EM
Sbjct: 252 RNSSTWNAMISAYTRVGDLLSARDLFDKMPERDAVSWNTMISGYAQNGQSAMAIELFKEM 311

Query: 263 MDA-GIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCGN 87
           +DA   QPDE T V+IIS+C   G   L   +V  +   +I +      ALI MY+KCGN
Sbjct: 312 IDAKDSQPDEVTMVSIISACGHLGALELGTWIVNFISEYRIELTISGYNALIFMYSKCGN 371

Query: 86  IETARCIFDEMGVHRNPVSWNAMISAY 6
           ++ A+ IF EM   R+ VS+N++I  +
Sbjct: 372 MKEAQRIFQEMET-RDVVSYNSLIGGF 397



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 29/84 (34%), Positives = 54/84 (64%)
 Frame = -3

Query: 446 ERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEE 267
           E  +  + A+I  YSK G+++ + R+F EM  + VVS+N+++ G+A +G   +A+KL   
Sbjct: 353 ELTISGYNALIFMYSKCGNMKEAQRIFQEMETRDVVSYNSLIGGFAAHGEGNEAIKLLLS 412

Query: 266 MMDAGIQPDETTWVTIISSCSEQG 195
           M + G+ PD  T++ ++++CS  G
Sbjct: 413 MKEEGVDPDHVTYIGVLTACSHAG 436


>ref|XP_004231316.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Solanum lycopersicum]
          Length = 758

 Score =  212 bits (539), Expect = 5e-53
 Identities = 97/157 (61%), Positives = 125/157 (79%)
 Frame = -3

Query: 476 EACHLFGLMPERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGF 297
           EA  LF LMPE+NVV+WTAM++GYS++ DLEN+ + F++MP +SVVSWNAMLSGYAQNG 
Sbjct: 179 EARSLFDLMPEKNVVTWTAMVTGYSRRKDLENARKYFDQMPERSVVSWNAMLSGYAQNGC 238

Query: 296 VKQAMKLFEEMMDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTA 117
            ++ +KLF EMM   + PDETTWVT+IS CS  GD  LA+ LV ++  + + +NCF KTA
Sbjct: 239 AEEVIKLFNEMMSCEVCPDETTWVTVISLCSSHGDVSLAEGLVKMINEKGVRLNCFAKTA 298

Query: 116 LIDMYAKCGNIETARCIFDEMGVHRNPVSWNAMISAY 6
           L+DMYAKCGN+  AR IFDE+G ++N V+WNAMISAY
Sbjct: 299 LLDMYAKCGNLAMARKIFDELGTYKNLVTWNAMISAY 335



 Score =  120 bits (300), Expect = 3e-25
 Identities = 58/144 (40%), Positives = 95/144 (65%)
 Frame = -3

Query: 443 RNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEM 264
           +N+V+W AMIS Y++ GDL ++  +F+++P K+V+SWN++++GYAQNG  K A+ LF++M
Sbjct: 323 KNLVTWNAMISAYARVGDLASARGLFDKVPEKNVISWNSIIAGYAQNGESKVAIDLFKDM 382

Query: 263 MDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCGNI 84
           +   + PDE T V++IS+C   G        V  LE  +I ++     ALI MY+KCGN+
Sbjct: 383 IAKDVLPDEVTMVSVISACGHLGALEFGNWAVNFLEKHQIKLSISGYNALIFMYSKCGNM 442

Query: 83  ETARCIFDEMGVHRNPVSWNAMIS 12
           + A  +F  M   R+ +S+N +I+
Sbjct: 443 KDAEKVFQSMEA-RDVISYNTLIT 465



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 34/145 (23%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
 Frame = -3

Query: 440 NVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMM 261
           ++  + A+I  YSK G+++++ +VF  M  + V+S+N +++G A  G   +A++L  +M 
Sbjct: 425 SISGYNALIFMYSKCGNMKDAEKVFQSMEARDVISYNTLITGVAAYGNAIEAVELLWKMK 484

Query: 260 DAGIQPDETTWVTIISSCSEQGDPRLAKSLV-GLLETRKIHMNCFVKTALIDMYAKCGNI 84
              I+PD  T++ ++++CS  G  +  + +   + +    H  C     ++D+  + G +
Sbjct: 485 KENIEPDRITYIGVLTACSHGGLLKEGQRIFDSIKDPDSDHYAC-----MVDLLGRNGKL 539

Query: 83  ETARCIFDEMGVHRNPVSWNAMISA 9
           + A+C+   M +H +   + +++ A
Sbjct: 540 DEAKCLIGSMAMHPHAGVYGSLLHA 564


>ref|XP_006358473.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Solanum tuberosum]
          Length = 758

 Score =  211 bits (538), Expect = 7e-53
 Identities = 96/157 (61%), Positives = 125/157 (79%)
 Frame = -3

Query: 476 EACHLFGLMPERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGF 297
           EA  LF LMPE+NVV+WTAM++GYS++ DLEN+ + F++MP +SVVSWNAMLSGYAQNG 
Sbjct: 179 EARSLFDLMPEKNVVTWTAMVTGYSRRKDLENARKYFDQMPERSVVSWNAMLSGYAQNGC 238

Query: 296 VKQAMKLFEEMMDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTA 117
            ++ ++LF EMM  G+ PDETTWVT+IS CS  GD  LA+ LV ++  + +  NCF KTA
Sbjct: 239 SEEVIRLFNEMMSCGVCPDETTWVTVISLCSSHGDASLAEGLVKMINDKGVRFNCFAKTA 298

Query: 116 LIDMYAKCGNIETARCIFDEMGVHRNPVSWNAMISAY 6
           L+DMYAKCGN+  +R IFDE+G ++N V+WNAMISAY
Sbjct: 299 LLDMYAKCGNLAMSRKIFDELGTYKNLVTWNAMISAY 335



 Score =  123 bits (309), Expect = 2e-26
 Identities = 59/146 (40%), Positives = 96/146 (65%)
 Frame = -3

Query: 443 RNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEM 264
           +N+V+W AMIS Y++ GDL ++ R+F+ +P K+V+SWN++++GYAQNG  K A+ LF++M
Sbjct: 323 KNLVTWNAMISAYARVGDLASARRLFDTVPEKNVISWNSIIAGYAQNGQSKVAIDLFKDM 382

Query: 263 MDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCGNI 84
           +   + PDE T V++IS+C   G        V  LE  +I ++     ALI MY+KCGN+
Sbjct: 383 IAKDVLPDEVTMVSVISACGHLGALEFGNWAVNFLEKHQIKLSISGDNALIFMYSKCGNM 442

Query: 83  ETARCIFDEMGVHRNPVSWNAMISAY 6
           + A  +F  M   R+ +S+N +I+ +
Sbjct: 443 KDAEKVFQSMD-SRDVISYNTLITGF 467



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 35/139 (25%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
 Frame = -3

Query: 422 AMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMMDAGIQP 243
           A+I  YSK G+++++ +VF  M ++ V+S+N +++G+A  G   +A++L  +M    I+P
Sbjct: 431 ALIFMYSKCGNMKDAEKVFQSMDSRDVISYNTLITGFAAYGNAVEAVELLWKMKKENIEP 490

Query: 242 DETTWVTIISSCSEQGDPRLAKSLV-GLLETRKIHMNCFVKTALIDMYAKCGNIETARCI 66
           D  T+V ++++CS  G     + +   + +    H  C     ++D+  + G ++ A+C+
Sbjct: 491 DRITYVGVLTACSHGGLLEEGQRIFDSIKDPDSDHYAC-----MVDLLGRNGKLDEAKCL 545

Query: 65  FDEMGVHRNPVSWNAMISA 9
              M +H +   + +++ A
Sbjct: 546 IGSMAMHPHAGVYGSLLHA 564



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/139 (29%), Positives = 63/139 (45%)
 Frame = -3

Query: 422 AMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMMDAGIQP 243
           A++  Y K G LE +  +F+E+P ++V  WNAM+SG    G   +A  LF+ M +  +  
Sbjct: 135 AIMDMYGKFGPLEIARELFDEIPERAVADWNAMISGCWNWGNEVEARSLFDLMPEKNV-- 192

Query: 242 DETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCGNIETARCIF 63
              TW                                   TA++  Y++  ++E AR  F
Sbjct: 193 --VTW-----------------------------------TAMVTGYSRRKDLENARKYF 215

Query: 62  DEMGVHRNPVSWNAMISAY 6
           D+M   R+ VSWNAM+S Y
Sbjct: 216 DQM-PERSVVSWNAMLSGY 233


>ref|XP_007225169.1| hypothetical protein PRUPE_ppa002283mg [Prunus persica]
           gi|462422105|gb|EMJ26368.1| hypothetical protein
           PRUPE_ppa002283mg [Prunus persica]
          Length = 692

 Score =  207 bits (528), Expect = 9e-52
 Identities = 97/160 (60%), Positives = 128/160 (80%)
 Frame = -3

Query: 482 KDEACHLFGLMPERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQN 303
           K EAC LF +MPERNVV+WTAM++GY++  DLEN+ R F+E+P K+VVSWNAMLS YAQN
Sbjct: 109 KAEACRLFDMMPERNVVTWTAMVTGYARMKDLENARRYFDEIPEKNVVSWNAMLSAYAQN 168

Query: 302 GFVKQAMKLFEEMMDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVK 123
            F ++A+KLF++MM++  QP+ETTW  +IS+CS  GD  LA S V  L  ++IH++ F K
Sbjct: 169 RFPEEALKLFDDMMNSRDQPNETTWAIVISACSSCGDCSLADSFVQKLNQKRIHLSYFAK 228

Query: 122 TALIDMYAKCGNIETARCIFDEMGVHRNPVSWNAMISAYT 3
           TAL+DMYAK G+++ AR +FDE+GV RN V+WNAMISAYT
Sbjct: 229 TALLDMYAKRGSLQAARQVFDELGVSRNTVTWNAMISAYT 268



 Score =  110 bits (274), Expect = 3e-22
 Identities = 56/148 (37%), Positives = 95/148 (64%), Gaps = 2/148 (1%)
 Frame = -3

Query: 443 RNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEM 264
           RN V+W AMIS Y++ GDL ++  +F++M  + VV+WN+M+SGYAQNG    A+ LF++M
Sbjct: 255 RNTVTWNAMISAYTRVGDLASARELFDKMLERDVVTWNSMISGYAQNGQSALAIDLFKDM 314

Query: 263 MDAG--IQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCG 90
           + A    +PDE T V++IS+C   G   +   ++ ++    I ++     +LI +Y+KCG
Sbjct: 315 ITAADDPKPDEVTMVSVISACGHLGALDIGNWVISIVRKNHIKLSISGYNSLIFLYSKCG 374

Query: 89  NIETARCIFDEMGVHRNPVSWNAMISAY 6
           +++ A+  F EM   R+ VS+N +I+ +
Sbjct: 375 SMDDAKRTFQEM-TTRDVVSYNTLIAGF 401



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 37/130 (28%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
 Frame = -3

Query: 440 NVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMM 261
           ++  + ++I  YSK G ++++ R F EM  + VVS+N +++G+A +G   +A+KL  +M 
Sbjct: 359 SISGYNSLIFLYSKCGSMDDAKRTFQEMTTRDVVSYNTLIAGFAAHGHGMEAVKLLSKMK 418

Query: 260 DAGIQPDETTWVTIISSCSEQGDPRLA-KSLVGLLETRKIHMNCFVKTALIDMYAKCGNI 84
              ++PD  T++ I+++CS  G      K    +      H  C     +ID+  + G +
Sbjct: 419 GEFVEPDRVTYIVILTACSHAGMLEEGWKVFESIKAPDADHYAC-----VIDLLGRVGKL 473

Query: 83  ETARCIFDEM 54
           + A+ I D+M
Sbjct: 474 DEAKKIIDDM 483


>ref|XP_006307192.1| hypothetical protein CARUB_v10008784mg [Capsella rubella]
           gi|482575903|gb|EOA40090.1| hypothetical protein
           CARUB_v10008784mg [Capsella rubella]
          Length = 543

 Score =  202 bits (513), Expect = 5e-50
 Identities = 94/162 (58%), Positives = 129/162 (79%), Gaps = 2/162 (1%)
 Frame = -3

Query: 482 KDEACHLFGLMPERN--VVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYA 309
           K+EAC LF +MPE +  VVSWT MI+G++K  DLEN+ + F+ MP KSVVSWNAMLSGYA
Sbjct: 183 KEEACKLFDMMPENDTDVVSWTVMITGFAKLKDLENARKYFDLMPEKSVVSWNAMLSGYA 242

Query: 308 QNGFVKQAMKLFEEMMDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCF 129
           QNGF ++ ++LF +M+  G++P+ETTWV +IS+CS + DP LA SLV L+  +++ +NC+
Sbjct: 243 QNGFTEETIRLFNDMLRFGVKPNETTWVIVISACSLRADPSLAHSLVKLIHEQRVRLNCY 302

Query: 128 VKTALIDMYAKCGNIETARCIFDEMGVHRNPVSWNAMISAYT 3
           VKTAL+DM+AKC +I +AR IF+E+G  +N V+WNAMIS YT
Sbjct: 303 VKTALLDMHAKCRDILSARRIFNELGTQKNLVTWNAMISGYT 344



 Score =  130 bits (326), Expect = 2e-28
 Identities = 62/148 (41%), Positives = 102/148 (68%), Gaps = 1/148 (0%)
 Frame = -3

Query: 446 ERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEE 267
           ++N+V+W AMISGY++ GDL ++ ++F+ MP +++VSWN+M++GYA NG    A++ FEE
Sbjct: 330 QKNLVTWNAMISGYTRIGDLTSARQLFDIMPERNIVSWNSMIAGYAHNGQPALAIEFFEE 389

Query: 266 MMDAG-IQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCG 90
           M+D G  +PDE T ++++S+C   GD  L   +V  +   +I +N     +LI MYA+CG
Sbjct: 390 MIDYGDSKPDEVTMISVLSACGHMGDLELGNCIVDYISKNQIKLNVSGYRSLIFMYARCG 449

Query: 89  NIETARCIFDEMGVHRNPVSWNAMISAY 6
           N+  A+ +FDE    R+ VS+N ++SA+
Sbjct: 450 NLWEAKRVFDET-KERDVVSYNTLLSAF 476



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 30/82 (36%), Positives = 54/82 (65%)
 Frame = -3

Query: 440 NVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMM 261
           NV  + ++I  Y++ G+L  + RVF+E   + VVS+N +LS +A NG   + ++LF +M 
Sbjct: 434 NVSGYRSLIFMYARCGNLWEAKRVFDETKERDVVSYNTLLSAFAANGDGVETLRLFSKMK 493

Query: 260 DAGIQPDETTWVTIISSCSEQG 195
             GI+PD TT+ +++++C+  G
Sbjct: 494 GEGIEPDHTTYTSVLTACNRAG 515


>ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  200 bits (508), Expect = 2e-49
 Identities = 94/157 (59%), Positives = 129/157 (82%)
 Frame = -3

Query: 476 EACHLFGLMPERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGF 297
           +A  LF +MPERNV++WTAM++GY+K  DLE + R F+ MP +SVVSWNAMLSGYAQNG 
Sbjct: 181 QAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGL 240

Query: 296 VKQAMKLFEEMMDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTA 117
            ++A++LF+EM++AGI+PDETTWVT+IS+CS +GDP LA SLV  L  ++I +NCFV+TA
Sbjct: 241 AEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTA 300

Query: 116 LIDMYAKCGNIETARCIFDEMGVHRNPVSWNAMISAY 6
           L+DMYAK G++++AR +F+ M   RN V+WN+MI+ Y
Sbjct: 301 LLDMYAKFGDLDSARKLFNTM-PGRNVVTWNSMIAGY 336



 Score =  114 bits (286), Expect = 1e-23
 Identities = 58/141 (41%), Positives = 95/141 (67%), Gaps = 1/141 (0%)
 Frame = -3

Query: 425 TAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMMDA-GI 249
           TA++  Y+K GDL+++ ++FN MP ++VV+WN+M++GYAQNG    A++LF+EM+ A  +
Sbjct: 299 TALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKL 358

Query: 248 QPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCGNIETARC 69
            PDE T V++IS+C   G   L   +V  L   +I ++     A+I MY++CG++E A+ 
Sbjct: 359 TPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKR 418

Query: 68  IFDEMGVHRNPVSWNAMISAY 6
           +F EM   R+ VS+N +IS +
Sbjct: 419 VFQEMAT-RDVVSYNTLISGF 438



 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 40/139 (28%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
 Frame = -3

Query: 422 AMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMMDAGIQP 243
           AMI  YS+ G +E++ RVF EM  + VVS+N ++SG+A +G   +A+ L   M + GI+P
Sbjct: 402 AMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEP 461

Query: 242 DETTWVTIISSCSEQGDPRLAKSLVGLLETRKI-HMNCFVKTALIDMYAKCGNIETARCI 66
           D  T++ ++++CS  G     + +   ++   I H  C     ++D+  + G +E A+  
Sbjct: 462 DRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDHYAC-----MVDLLGRVGELEDAKRT 516

Query: 65  FDEMGVHRNPVSWNAMISA 9
            + M +  +   + ++++A
Sbjct: 517 MERMPMEPHAGVYGSLLNA 535



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
 Frame = -3

Query: 371 VFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMMDAGIQPDETTWVTIISSCSEQGD 192
           +FN   N +V  + +ML  Y+      + + ++E+M   G++PD   +  +I S    G 
Sbjct: 56  LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGI 115

Query: 191 PRLAKSLVGLLETRKIH-MNCFVKTALIDMYAKCGNIETARCIFDEM-GVHRNPVSWNAM 18
              A  L      +  H  + FV+ A+IDMYA+ G I  AR +FDE+    R    WNAM
Sbjct: 116 GFHAHVL------KLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAM 169

Query: 17  ISAY 6
           +S Y
Sbjct: 170 VSGY 173



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
 Frame = -3

Query: 422 AMISGYSKQGDLENSWRVFNEMPN--KSVVSWNAMLSGYAQNGFVKQAMKLFEEMMDAGI 249
           A+I  Y++ G + ++ +VF+E+P+  + V  WNAM+SGY +     QA  LF+ M +  +
Sbjct: 135 AVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNV 194

Query: 248 QPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCGNIETARC 69
                TW  +++  ++  D   A+     +  R +        A++  YA+ G  E A  
Sbjct: 195 ----ITWTAMVTGYAKVKDLEAARRYFDCMPERSV----VSWNAMLSGYAQNGLAEEALR 246

Query: 68  IFDEM---GVHRNPVSWNAMISA 9
           +FDEM   G+  +  +W  +ISA
Sbjct: 247 LFDEMVNAGIEPDETTWVTVISA 269


>ref|XP_006417007.1| hypothetical protein EUTSA_v10009648mg [Eutrema salsugineum]
           gi|557094778|gb|ESQ35360.1| hypothetical protein
           EUTSA_v10009648mg [Eutrema salsugineum]
          Length = 490

 Score =  199 bits (507), Expect = 3e-49
 Identities = 91/162 (56%), Positives = 129/162 (79%), Gaps = 2/162 (1%)
 Frame = -3

Query: 482 KDEACHLFGLMPER--NVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYA 309
           K+EAC+ F +MPE   + VSWT MI+G++K  DL+++   F++M  KSVV+WNAMLSGYA
Sbjct: 170 KEEACNFFDIMPENKTDAVSWTVMITGFAKLKDLKSARWYFDQMQEKSVVTWNAMLSGYA 229

Query: 308 QNGFVKQAMKLFEEMMDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCF 129
           QNGF ++ ++LF +MM  G++P+ETTWV +IS+CS +GDP LA SLV L++ +++ +NCF
Sbjct: 230 QNGFTEETLRLFNDMMRLGVKPNETTWVIVISACSSRGDPSLAHSLVKLIDEQRVRLNCF 289

Query: 128 VKTALIDMYAKCGNIETARCIFDEMGVHRNPVSWNAMISAYT 3
           +KTAL+DM+AKC +I +AR IF+E+G  RN V+WNAMIS YT
Sbjct: 290 LKTALLDMHAKCRDIVSARRIFNELGTQRNLVTWNAMISGYT 331



 Score =  117 bits (293), Expect = 2e-24
 Identities = 60/147 (40%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
 Frame = -3

Query: 446 ERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEE 267
           +RN+V+W AMISGY++ GDL  + ++F+ MP K+VVSWN+M++G+A NG    A++ F+E
Sbjct: 317 QRNLVTWNAMISGYTRIGDLSLARQLFDTMPEKNVVSWNSMIAGFAHNGQPALAIEFFKE 376

Query: 266 MMDAG-IQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCG 90
           M+D+G  +PDE T +  +S+C    D  L   +V  +   +I ++     +LI MY +CG
Sbjct: 377 MIDSGDSKPDEVTMIGALSACGRMDDLELGDWIVNYIAKNQIKLSVSGFKSLIFMYVRCG 436

Query: 89  NIETARCIFDEMGVHRNPVSWNAMISA 9
           N+  A  +FDE+   R+ VS+  +ISA
Sbjct: 437 NLRAATQVFDEI-KERDVVSYITLISA 462


>ref|XP_004300036.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Fragaria vesca subsp. vesca]
          Length = 764

 Score =  199 bits (507), Expect = 3e-49
 Identities = 89/159 (55%), Positives = 128/159 (80%)
 Frame = -3

Query: 482 KDEACHLFGLMPERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQN 303
           K EAC LF +MPE++VVSWTAM++GY++  DLEN+ R F+++P K+VVSWNAMLS YAQN
Sbjct: 182 KVEACKLFDMMPEKDVVSWTAMVTGYARMKDLENARRCFDDVPEKNVVSWNAMLSAYAQN 241

Query: 302 GFVKQAMKLFEEMMDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVK 123
           G  ++A++LF++MMD+G+QP+ETTW  +IS+CS  GD  +  S +  L  +++H++ F K
Sbjct: 242 GCPEEALRLFDDMMDSGVQPNETTWAVVISACSSCGDSSVVDSFIQKLNQKRMHLSYFGK 301

Query: 122 TALIDMYAKCGNIETARCIFDEMGVHRNPVSWNAMISAY 6
           TA++DMYAK G+IE AR +FDE+GV+++  +WNAMISAY
Sbjct: 302 TAMLDMYAKRGSIERAREVFDELGVYKSSGTWNAMISAY 340



 Score =  108 bits (271), Expect = 6e-22
 Identities = 56/143 (39%), Positives = 93/143 (65%), Gaps = 1/143 (0%)
 Frame = -3

Query: 431 SWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMMDA- 255
           +W AMIS Y++ GDL ++  +F++M  + V+SWN+M+SGYAQNG    A+ LF++M  + 
Sbjct: 332 TWNAMISAYARVGDLTSARELFDKMLERDVISWNSMISGYAQNGQSALAIDLFKDMTASN 391

Query: 254 GIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCGNIETA 75
             +P+E T  ++IS+C   G   +    V  L    I+ +  V  +LI +Y+KCG+++ A
Sbjct: 392 NPKPNEVTMASVISACGHLGALEIGNWAVNFLTKHHINPSISVYNSLISLYSKCGSMDDA 451

Query: 74  RCIFDEMGVHRNPVSWNAMISAY 6
           + IFDE+  +R+ VS+NA+IS +
Sbjct: 452 KRIFDEI-KNRDVVSYNALISGF 473



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 39/141 (27%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
 Frame = -3

Query: 428 WTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMMDAGI 249
           + ++IS YSK G ++++ R+F+E+ N+ VVS+NA++SG+A +G   +A+KL  +M +  +
Sbjct: 435 YNSLISLYSKCGSMDDAKRIFDEIKNRDVVSYNALISGFAAHGHGMEAVKLMMKMKEEFL 494

Query: 248 QPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKI-HMNCFVKTALIDMYAKCGNIETAR 72
           +P+  T++ I+++CS  G     + +   ++   + H  C     L+D+  + G ++ A+
Sbjct: 495 EPNRETYIGILTACSHAGLLEEGQKIFESIKDPDVDHYAC-----LVDLLGRVGKVDEAK 549

Query: 71  CIFDEMGVHRNPVSWNAMISA 9
            I D M    +   + ++++A
Sbjct: 550 NIVDGMQKEPHAGVYGSLLNA 570


>ref|XP_002890056.1| hypothetical protein ARALYDRAFT_888825 [Arabidopsis lyrata subsp.
           lyrata] gi|297335898|gb|EFH66315.1| hypothetical protein
           ARALYDRAFT_888825 [Arabidopsis lyrata subsp. lyrata]
          Length = 790

 Score =  198 bits (504), Expect = 6e-49
 Identities = 95/162 (58%), Positives = 128/162 (79%), Gaps = 2/162 (1%)
 Frame = -3

Query: 482 KDEACHLFGLMPER--NVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYA 309
           K+EAC LF +MPE   +VVSWT MI+G++K  DLEN+ R F+ MP KSVVSWNAMLSGY+
Sbjct: 183 KEEACKLFDMMPEGKIDVVSWTVMITGFAKLKDLENARRCFDCMPEKSVVSWNAMLSGYS 242

Query: 308 QNGFVKQAMKLFEEMMDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCF 129
           QNGF ++ ++LF +M+  G++P+ETTWV +IS+CS + DP LA SLV L+  ++I +N F
Sbjct: 243 QNGFTEETLRLFNDMLRLGVRPNETTWVIVISACSFRADPSLAHSLVKLIGEKRIRLNFF 302

Query: 128 VKTALIDMYAKCGNIETARCIFDEMGVHRNPVSWNAMISAYT 3
           VKTAL+DM+AKC +I +AR IF+E+G  +N V+WNAMIS YT
Sbjct: 303 VKTALLDMHAKCRDILSARRIFNELGTQKNLVTWNAMISGYT 344



 Score =  128 bits (322), Expect = 7e-28
 Identities = 61/148 (41%), Positives = 103/148 (69%), Gaps = 1/148 (0%)
 Frame = -3

Query: 446 ERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEE 267
           ++N+V+W AMISGY++ GD+ ++ ++F+ MP ++VVSWN++++GYA NG    A++ FE+
Sbjct: 330 QKNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSVIAGYAHNGQPALAIEFFED 389

Query: 266 MMDAG-IQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCG 90
           M+D G  +PDE T ++++S+C   GD  L   +V  +  ++I +N     +LI MYA+CG
Sbjct: 390 MIDYGDSKPDEVTMISVLSACGHMGDLELGDCIVDYIGKKQIKLNDSGYRSLIFMYARCG 449

Query: 89  NIETARCIFDEMGVHRNPVSWNAMISAY 6
           N+  A+ +FDEM   R+ VS+N + SA+
Sbjct: 450 NLWEAKRVFDEM-KERDVVSYNTLFSAF 476



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 38/122 (31%), Positives = 63/122 (51%)
 Frame = -3

Query: 371 VFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMMDAGIQPDETTWVTIISSCSEQGD 192
           VF+ +   +V   N+M   ++Q      A++L+E+    GI PD   +  +I S  + G 
Sbjct: 62  VFDSVTFPNVFLVNSMFRYFSQMDMANDALRLYEQRSRCGIMPDTFFFPVVIKSAGKFG- 120

Query: 191 PRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCGNIETARCIFDEMGVHRNPVSWNAMIS 12
                    L+E   I  + +V+  ++DMYAK  ++E+AR +FD++  HR    WN MIS
Sbjct: 121 ----VLFQALVEKMGIFKDPYVRNVIMDMYAKHESVESARKVFDQI-THRKGSDWNVMIS 175

Query: 11  AY 6
            Y
Sbjct: 176 GY 177



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 28/82 (34%), Positives = 51/82 (62%)
 Frame = -3

Query: 440 NVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMM 261
           N   + ++I  Y++ G+L  + RVF+EM  + VVS+N + S +A NG   + + L  +M 
Sbjct: 434 NDSGYRSLIFMYARCGNLWEAKRVFDEMKERDVVSYNTLFSAFAANGDGVKTLNLLSKMK 493

Query: 260 DAGIQPDETTWVTIISSCSEQG 195
           D GI+PD  T+ +++++C+  G
Sbjct: 494 DEGIEPDRVTYTSVLTACNRAG 515



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
 Frame = -3

Query: 407 YSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMMDAGIQPDETTW 228
           Y+K   +E++ +VF+++ ++    WN M+SGY + G  ++A KLF+ M +  I  D  +W
Sbjct: 146 YAKHESVESARKVFDQITHRKGSDWNVMISGYWKYGNKEEACKLFDMMPEGKI--DVVSW 203

Query: 227 VTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCGNIETARCIFDEM-- 54
             +I+  ++  D   A+     +  + +        A++  Y++ G  E    +F++M  
Sbjct: 204 TVMITGFAKLKDLENARRCFDCMPEKSV----VSWNAMLSGYSQNGFTEETLRLFNDMLR 259

Query: 53  -GVHRNPVSWNAMISA 9
            GV  N  +W  +ISA
Sbjct: 260 LGVRPNETTWVIVISA 275


>ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  198 bits (503), Expect = 7e-49
 Identities = 92/158 (58%), Positives = 122/158 (77%)
 Frame = -3

Query: 476 EACHLFGLMPERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGF 297
           EA  LF +MP RN+++WT+M++GY+K GDLE++ R F+EMP +SVVSWNAM S YAQ   
Sbjct: 179 EAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKEC 238

Query: 296 VKQAMKLFEEMMDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTA 117
            K+A+ LF +M++ GI PD+TTWV  ISSCS  GDP LA S++ +++ + I +N FVKTA
Sbjct: 239 PKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTA 298

Query: 116 LIDMYAKCGNIETARCIFDEMGVHRNPVSWNAMISAYT 3
           L+DM+AK GN+E AR IFDE+G  RN V+WN MISAYT
Sbjct: 299 LLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYT 336



 Score =  114 bits (285), Expect = 1e-23
 Identities = 58/148 (39%), Positives = 94/148 (63%), Gaps = 1/148 (0%)
 Frame = -3

Query: 446 ERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEE 267
           +RN V+W  MIS Y++ G L  +  +F+ MP + VVSWN+M++GYAQNG    +++LF+E
Sbjct: 322 QRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKE 381

Query: 266 MMDA-GIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCG 90
           M+    IQPDE T  +++S+C   G  +L+  ++ ++  + I +      +LI MY+KCG
Sbjct: 382 MISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCG 441

Query: 89  NIETARCIFDEMGVHRNPVSWNAMISAY 6
           ++  A  IF  MG  R+ VS+N +IS +
Sbjct: 442 SVADAHRIFQTMGT-RDVVSFNTLISGF 468



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 38/144 (26%), Positives = 81/144 (56%), Gaps = 1/144 (0%)
 Frame = -3

Query: 437 VVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMMD 258
           +  + ++I  YSK G + ++ R+F  M  + VVS+N ++SG+A NG  K+A+KL   M +
Sbjct: 427 ISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEE 486

Query: 257 AGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKI-HMNCFVKTALIDMYAKCGNIE 81
            GI+PD  T++ ++++CS  G     K++   ++   + H  C     ++D+  + G ++
Sbjct: 487 EGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQAPTVDHYAC-----MVDLLGRAGELD 541

Query: 80  TARCIFDEMGVHRNPVSWNAMISA 9
            A+ +   M +  +   + ++++A
Sbjct: 542 EAKMLIQSMPMKPHAGVYGSLLNA 565


>ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  198 bits (503), Expect = 7e-49
 Identities = 92/158 (58%), Positives = 122/158 (77%)
 Frame = -3

Query: 476 EACHLFGLMPERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGF 297
           EA  LF +MP RN+++WT+M++GY+K GDLE++ R F+EMP +SVVSWNAM S YAQ   
Sbjct: 179 EAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKEC 238

Query: 296 VKQAMKLFEEMMDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTA 117
            K+A+ LF +M++ GI PD+TTWV  ISSCS  GDP LA S++ +++ + I +N FVKTA
Sbjct: 239 PKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTA 298

Query: 116 LIDMYAKCGNIETARCIFDEMGVHRNPVSWNAMISAYT 3
           L+DM+AK GN+E AR IFDE+G  RN V+WN MISAYT
Sbjct: 299 LLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYT 336



 Score =  114 bits (285), Expect = 1e-23
 Identities = 58/148 (39%), Positives = 94/148 (63%), Gaps = 1/148 (0%)
 Frame = -3

Query: 446 ERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEE 267
           +RN V+W  MIS Y++ G L  +  +F+ MP + VVSWN+M++GYAQNG    +++LF+E
Sbjct: 322 QRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKE 381

Query: 266 MMDA-GIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCG 90
           M+    IQPDE T  +++S+C   G  +L+  ++ ++  + I +      +LI MY+KCG
Sbjct: 382 MISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCG 441

Query: 89  NIETARCIFDEMGVHRNPVSWNAMISAY 6
           ++  A  IF  MG  R+ VS+N +IS +
Sbjct: 442 SVADAHRIFQTMGT-RDVVSFNTLISGF 468



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 38/144 (26%), Positives = 81/144 (56%), Gaps = 1/144 (0%)
 Frame = -3

Query: 437 VVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMMD 258
           +  + ++I  YSK G + ++ R+F  M  + VVS+N ++SG+A NG  K+A+KL   M +
Sbjct: 427 ISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEE 486

Query: 257 AGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKI-HMNCFVKTALIDMYAKCGNIE 81
            GI+PD  T++ ++++CS  G     K++   ++   + H  C     ++D+  + G ++
Sbjct: 487 EGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQAPTVDHYAC-----MVDLLGRAGELD 541

Query: 80  TARCIFDEMGVHRNPVSWNAMISA 9
            A+ +   M +  +   + ++++A
Sbjct: 542 EAKMLIQSMPMKPHAGVYGSLLNA 565


>ref|XP_007023780.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma
           cacao] gi|590617403|ref|XP_007023781.1|
           Pentatricopeptide repeat superfamily protein isoform 2
           [Theobroma cacao] gi|508779146|gb|EOY26402.1|
           Pentatricopeptide repeat superfamily protein isoform 2
           [Theobroma cacao] gi|508779147|gb|EOY26403.1|
           Pentatricopeptide repeat superfamily protein isoform 2
           [Theobroma cacao]
          Length = 777

 Score =  193 bits (490), Expect = 2e-47
 Identities = 95/161 (59%), Positives = 123/161 (76%), Gaps = 4/161 (2%)
 Frame = -3

Query: 476 EACHLFGLMPE--RNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQN 303
           EAC LF LMPE  RNVV+WTAM++G +   DL  + R F+ MP ++VVSWNAMLSGYA+N
Sbjct: 193 EACCLFNLMPENKRNVVTWTAMVTGSANMKDLITARRYFDRMPRRNVVSWNAMLSGYAKN 252

Query: 302 GFVKQAMKLFEEMMDAG--IQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCF 129
           GF K+A+ LF  M+ AG  I+P++ TWV +ISSCS   DP LA S+V  L+ +KI +N +
Sbjct: 253 GFAKEALHLFLHMIKAGDGIEPNQITWVAVISSCSSLADPCLADSVVKFLDKKKIQLNSY 312

Query: 128 VKTALIDMYAKCGNIETARCIFDEMGVHRNPVSWNAMISAY 6
           +KTAL+DM+AKCGN+ETA+ IFDE G HR+  +WNAMISAY
Sbjct: 313 LKTALLDMHAKCGNLETAQKIFDEFGEHRSCTTWNAMISAY 353



 Score =  110 bits (276), Expect = 2e-22
 Identities = 56/147 (38%), Positives = 95/147 (64%), Gaps = 1/147 (0%)
 Frame = -3

Query: 443 RNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEM 264
           R+  +W AMIS Y + G+L  +  +F++MP ++VVSWN+M++G+AQNG    A++LF+EM
Sbjct: 341 RSCTTWNAMISAYMRFGNLALARELFDKMPVRNVVSWNSMIAGFAQNGQPAMAIQLFKEM 400

Query: 263 M-DAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCGN 87
           +    ++PDE T V++IS C + G   +   +V  +   +I ++      LI MY+KCG+
Sbjct: 401 IATTNLKPDEVTMVSVISVCGQLGALEMGNWVVNFIVENQIKLSISGYNTLIFMYSKCGS 460

Query: 86  IETARCIFDEMGVHRNPVSWNAMISAY 6
           ++ A  IF EM   R+ +S+NA++S +
Sbjct: 461 MKDAERIFQEM-KRRDTISYNALVSGF 486



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 39/150 (26%), Positives = 82/150 (54%), Gaps = 4/150 (2%)
 Frame = -3

Query: 440 NVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMM 261
           ++  +  +I  YSK G ++++ R+F EM  +  +S+NA++SG+  +G   +A++L   M 
Sbjct: 444 SISGYNTLIFMYSKCGSMKDAERIFQEMKRRDTISYNALVSGFGAHGRGIEAVELMSRMR 503

Query: 260 DAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKI----HMNCFVKTALIDMYAKC 93
             GI+PD  T++ ++++CS     RL K    + E+ K     H  C     ++D+  + 
Sbjct: 504 KEGIEPDHITYIGVLTACSH---ARLLKEGRRVFESIKFPAVDHYAC-----MVDLLGRV 555

Query: 92  GNIETARCIFDEMGVHRNPVSWNAMISAYT 3
           G ++ A+ + D M +  +   + ++++A T
Sbjct: 556 GELDEAKRLIDHMPMEPHAGIYGSLLNAST 585



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
 Frame = -3

Query: 467 HLFGLMPERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQ 288
           HL  L    +  +  A++  Y+K G +E + ++F+EMP +    WN+M+SGY + G   +
Sbjct: 134 HLVKLGHHHDPHTRNALMDSYAKFGPIEAARKLFDEMPGRMAEDWNSMISGYWKWGKEAE 193

Query: 287 AMKLFEEMMDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALID 108
           A  LF  M +   + +  TW  +++  +   D   A+     +  R    N     A++ 
Sbjct: 194 ACCLFNLMPEN--KRNVVTWTAMVTGSANMKDLITARRYFDRMPRR----NVVSWNAMLS 247

Query: 107 MYAKCGNIETARCIFDEM-----GVHRNPVSWNAMISA 9
            YAK G  + A  +F  M     G+  N ++W A+IS+
Sbjct: 248 GYAKNGFAKEALHLFLHMIKAGDGIEPNQITWVAVISS 285


>ref|XP_007023779.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
           cacao] gi|508779145|gb|EOY26401.1| Pentatricopeptide
           repeat superfamily protein isoform 1 [Theobroma cacao]
          Length = 833

 Score =  193 bits (490), Expect = 2e-47
 Identities = 95/161 (59%), Positives = 123/161 (76%), Gaps = 4/161 (2%)
 Frame = -3

Query: 476 EACHLFGLMPE--RNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQN 303
           EAC LF LMPE  RNVV+WTAM++G +   DL  + R F+ MP ++VVSWNAMLSGYA+N
Sbjct: 193 EACCLFNLMPENKRNVVTWTAMVTGSANMKDLITARRYFDRMPRRNVVSWNAMLSGYAKN 252

Query: 302 GFVKQAMKLFEEMMDAG--IQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCF 129
           GF K+A+ LF  M+ AG  I+P++ TWV +ISSCS   DP LA S+V  L+ +KI +N +
Sbjct: 253 GFAKEALHLFLHMIKAGDGIEPNQITWVAVISSCSSLADPCLADSVVKFLDKKKIQLNSY 312

Query: 128 VKTALIDMYAKCGNIETARCIFDEMGVHRNPVSWNAMISAY 6
           +KTAL+DM+AKCGN+ETA+ IFDE G HR+  +WNAMISAY
Sbjct: 313 LKTALLDMHAKCGNLETAQKIFDEFGEHRSCTTWNAMISAY 353



 Score =  110 bits (276), Expect = 2e-22
 Identities = 56/147 (38%), Positives = 95/147 (64%), Gaps = 1/147 (0%)
 Frame = -3

Query: 443 RNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEM 264
           R+  +W AMIS Y + G+L  +  +F++MP ++VVSWN+M++G+AQNG    A++LF+EM
Sbjct: 341 RSCTTWNAMISAYMRFGNLALARELFDKMPVRNVVSWNSMIAGFAQNGQPAMAIQLFKEM 400

Query: 263 M-DAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCGN 87
           +    ++PDE T V++IS C + G   +   +V  +   +I ++      LI MY+KCG+
Sbjct: 401 IATTNLKPDEVTMVSVISVCGQLGALEMGNWVVNFIVENQIKLSISGYNTLIFMYSKCGS 460

Query: 86  IETARCIFDEMGVHRNPVSWNAMISAY 6
           ++ A  IF EM   R+ +S+NA++S +
Sbjct: 461 MKDAERIFQEM-KRRDTISYNALVSGF 486



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 39/150 (26%), Positives = 82/150 (54%), Gaps = 4/150 (2%)
 Frame = -3

Query: 440 NVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMM 261
           ++  +  +I  YSK G ++++ R+F EM  +  +S+NA++SG+  +G   +A++L   M 
Sbjct: 444 SISGYNTLIFMYSKCGSMKDAERIFQEMKRRDTISYNALVSGFGAHGRGIEAVELMSRMR 503

Query: 260 DAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKI----HMNCFVKTALIDMYAKC 93
             GI+PD  T++ ++++CS     RL K    + E+ K     H  C     ++D+  + 
Sbjct: 504 KEGIEPDHITYIGVLTACSH---ARLLKEGRRVFESIKFPAVDHYAC-----MVDLLGRV 555

Query: 92  GNIETARCIFDEMGVHRNPVSWNAMISAYT 3
           G ++ A+ + D M +  +   + ++++A T
Sbjct: 556 GELDEAKRLIDHMPMEPHAGIYGSLLNAST 585



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
 Frame = -3

Query: 467 HLFGLMPERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQ 288
           HL  L    +  +  A++  Y+K G +E + ++F+EMP +    WN+M+SGY + G   +
Sbjct: 134 HLVKLGHHHDPHTRNALMDSYAKFGPIEAARKLFDEMPGRMAEDWNSMISGYWKWGKEAE 193

Query: 287 AMKLFEEMMDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALID 108
           A  LF  M +   + +  TW  +++  +   D   A+     +  R    N     A++ 
Sbjct: 194 ACCLFNLMPEN--KRNVVTWTAMVTGSANMKDLITARRYFDRMPRR----NVVSWNAMLS 247

Query: 107 MYAKCGNIETARCIFDEM-----GVHRNPVSWNAMISA 9
            YAK G  + A  +F  M     G+  N ++W A+IS+
Sbjct: 248 GYAKNGFAKEALHLFLHMIKAGDGIEPNQITWVAVISS 285


>ref|XP_006575401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Glycine max]
          Length = 640

 Score =  187 bits (476), Expect = 1e-45
 Identities = 86/159 (54%), Positives = 123/159 (77%), Gaps = 2/159 (1%)
 Frame = -3

Query: 476 EACHLFGLM--PERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQN 303
           EA  LF +M   E+NV++WT M++G++K  +LE +   F+EMP + V SWNAMLSGYAQ+
Sbjct: 183 EATRLFCMMGESEKNVITWTTMVTGHAKMRNLETARMYFDEMPERRVASWNAMLSGYAQS 242

Query: 302 GFVKQAMKLFEEMMDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVK 123
           G  ++ ++LF++M+ +G +PDETTWVT++SSCS  GDP LA+S+V  L+      N FVK
Sbjct: 243 GAAQETVRLFDDMLSSGNEPDETTWVTVLSSCSSLGDPCLAESIVRKLDRMNFRSNYFVK 302

Query: 122 TALIDMYAKCGNIETARCIFDEMGVHRNPVSWNAMISAY 6
           TAL+DM+AKCGN+E A+ IF+++GV++N V+WNAMISAY
Sbjct: 303 TALLDMHAKCGNLEVAQKIFEQLGVYKNSVTWNAMISAY 341



 Score =  114 bits (286), Expect = 1e-23
 Identities = 60/145 (41%), Positives = 93/145 (64%), Gaps = 1/145 (0%)
 Frame = -3

Query: 443 RNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEM 264
           +N V+W AMIS Y++ GDL  +  +FN+MP ++ VSWN+M++GYAQNG   +A++LF+EM
Sbjct: 329 KNSVTWNAMISAYARVGDLSLARDLFNKMPERNTVSWNSMIAGYAQNGESLKAIQLFKEM 388

Query: 263 MDA-GIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCGN 87
           + +   +PDE T V++ S+C   G   L    V +L    I ++     +LI MY +CG+
Sbjct: 389 ISSKDSKPDEVTMVSVFSACGHLGRLGLGNWAVSILHENHIKLSISGYNSLIFMYLRCGS 448

Query: 86  IETARCIFDEMGVHRNPVSWNAMIS 12
           +E AR  F EM   ++ VS+N +IS
Sbjct: 449 MEDARITFQEMAT-KDLVSYNTLIS 472



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 39/148 (26%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
 Frame = -3

Query: 440 NVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMM 261
           ++  + ++I  Y + G +E++   F EM  K +VS+N ++SG A +G   +++KL  +M 
Sbjct: 432 SISGYNSLIFMYLRCGSMEDARITFQEMATKDLVSYNTLISGLAAHGHGTESIKLMSKMK 491

Query: 260 DAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKI----HMNCFVKTALIDMYAKC 93
           + GI PD  T++ ++++CS  G   L +    + E+ K+    H  C     +IDM  + 
Sbjct: 492 EDGIGPDRITYIGVLTACSHAG---LLEEGWKVFESIKVPDVDHYAC-----MIDMLGRV 543

Query: 92  GNIETARCIFDEMGVHRNPVSWNAMISA 9
           G +E A  +   M +  +   + ++++A
Sbjct: 544 GKLEEAVKLIQSMPMEPHAGIYGSLLNA 571



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 42/139 (30%), Positives = 68/139 (48%)
 Frame = -3

Query: 422 AMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMMDAGIQP 243
           A++  Y+K G +E + ++F+EMP+++   WN ++SGY + G  K+A +LF  M ++  + 
Sbjct: 139 AIMGIYAKYGCIELARKLFDEMPDRTAADWNVIISGYWKCGNEKEATRLFCMMGES--EK 196

Query: 242 DETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCGNIETARCIF 63
           +  TW T+++                                    +AK  N+ETAR  F
Sbjct: 197 NVITWTTMVTG-----------------------------------HAKMRNLETARMYF 221

Query: 62  DEMGVHRNPVSWNAMISAY 6
           DEM   R   SWNAM+S Y
Sbjct: 222 DEM-PERRVASWNAMLSGY 239


>ref|XP_007148596.1| hypothetical protein PHAVU_006G221900g [Phaseolus vulgaris]
           gi|561021819|gb|ESW20590.1| hypothetical protein
           PHAVU_006G221900g [Phaseolus vulgaris]
          Length = 638

 Score =  185 bits (469), Expect = 7e-45
 Identities = 87/159 (54%), Positives = 121/159 (76%), Gaps = 2/159 (1%)
 Frame = -3

Query: 476 EACHLFGLMPE--RNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQN 303
           EA  LF  M E  RNV++WT M++G++K  +L+ +   F+EMP +SVVSWNAMLSGYAQ+
Sbjct: 181 EASRLFCTMGESKRNVITWTTMVTGHAKMRNLKAARIYFDEMPERSVVSWNAMLSGYAQS 240

Query: 302 GFVKQAMKLFEEMMDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVK 123
           G  ++ + LF +M+ +G +PDETTWVT++SSCS  GDP LA+S+V  L+      N FVK
Sbjct: 241 GAAQETLSLFNDMLSSGNEPDETTWVTVLSSCSSLGDPSLAESIVKKLDKMSFRSNYFVK 300

Query: 122 TALIDMYAKCGNIETARCIFDEMGVHRNPVSWNAMISAY 6
           TAL+DM+AKCGN+E A+ IFD++G+++  V+WNAMISAY
Sbjct: 301 TALLDMHAKCGNLELAQKIFDQLGLYKTSVTWNAMISAY 339



 Score =  117 bits (292), Expect = 2e-24
 Identities = 63/142 (44%), Positives = 90/142 (63%), Gaps = 1/142 (0%)
 Frame = -3

Query: 434 VSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMMDA 255
           V+W AMIS Y++ G+L  +  +FN MP +  VSWN+M++GYAQNG   +A+KLF+EMM +
Sbjct: 330 VTWNAMISAYARVGNLSLARDLFNTMPERDTVSWNSMIAGYAQNGESLKAIKLFKEMMSS 389

Query: 254 -GIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCGNIET 78
              +PDE T VT+ S+C   G   L    V +L    I ++     ALI MY +CG++E 
Sbjct: 390 KDSKPDEVTMVTVFSACGHLGRLGLGNWAVSILSENHIKLSISGYNALIFMYLRCGSLED 449

Query: 77  ARCIFDEMGVHRNPVSWNAMIS 12
           AR IF +M   R+ VS+N +IS
Sbjct: 450 ARIIFQKMAT-RDLVSYNTLIS 470



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 38/148 (25%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
 Frame = -3

Query: 440 NVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMM 261
           ++  + A+I  Y + G LE++  +F +M  + +VS+N ++SG A +G   ++ +L  +M 
Sbjct: 430 SISGYNALIFMYLRCGSLEDARIIFQKMATRDLVSYNTLISGLAAHGHGTESFRLMSKMR 489

Query: 260 DAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKI----HMNCFVKTALIDMYAKC 93
           + GI+PD  T++ ++++CS  G   L +    + E+ K+    H  C     +IDM  + 
Sbjct: 490 EGGIEPDRITYIGVLTACSHAG---LLEEGWEIFESIKVPDVDHYAC-----MIDMLGRV 541

Query: 92  GNIETARCIFDEMGVHRNPVSWNAMISA 9
           G +E A  +   M +  +   + ++++A
Sbjct: 542 GKLEDAIKLIQSMPMEPHAGIYGSLLNA 569


>ref|XP_006836942.1| hypothetical protein AMTR_s00099p00155770 [Amborella trichopoda]
           gi|548839506|gb|ERM99795.1| hypothetical protein
           AMTR_s00099p00155770 [Amborella trichopoda]
          Length = 394

 Score =  176 bits (447), Expect = 2e-42
 Identities = 86/156 (55%), Positives = 116/156 (74%), Gaps = 2/156 (1%)
 Frame = -3

Query: 464 LFGLMPERNVVSWTAMISGYSKQGDLENSW-RVFNEMPNKSVVSWNAMLSGYAQNGFVKQ 288
           LF  MPER  VSWTAM+S Y+K G L  +  R F++MPN++VVSWNAMLSGYAQ GFV +
Sbjct: 175 LFDSMPERTAVSWTAMLSAYAKCGQLSLARDRFFDKMPNRTVVSWNAMLSGYAQKGFVNE 234

Query: 287 AMKLFEEM-MDAGIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALI 111
           A++LF +M M   + P+ETT  T++S+CS+ GDP LA+ ++G ++   +  NCFVKTA++
Sbjct: 235 AIELFRDMVMRREVPPNETTLATVVSACSKHGDPELAEWIIGFVDQCGVKPNCFVKTAMV 294

Query: 110 DMYAKCGNIETARCIFDEMGVHRNPVSWNAMISAYT 3
           DMY KCG++E AR +FD M  H+N  SWNAMIS Y+
Sbjct: 295 DMYCKCGSLEKARELFDAM-THKNSFSWNAMISGYS 329



 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 42/84 (50%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
 Frame = -3

Query: 479 DEACHLFGLMPERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNG 300
           ++A  LF  M  +N  SW AMISGYS+ G+L ++  +F++MPN++VVSWN+M++GYAQNG
Sbjct: 304 EKARELFDAMTHKNSFSWNAMISGYSRNGNLCSARELFDKMPNRTVVSWNSMIAGYAQNG 363

Query: 299 FVKQAMKLFEEMMD-AGIQPDETT 231
               A++LF+EM++ A + PDE T
Sbjct: 364 LWSLAIELFKEMVERARVGPDEVT 387



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/77 (36%), Positives = 49/77 (63%)
 Frame = -3

Query: 425 TAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMMDAGIQ 246
           TAM+  Y K G LE +  +F+ M +K+  SWNAM+SGY++NG +  A +LF++M +  + 
Sbjct: 291 TAMVDMYCKCGSLEKARELFDAMTHKNSFSWNAMISGYSRNGNLCSARELFDKMPNRTV- 349

Query: 245 PDETTWVTIISSCSEQG 195
               +W ++I+  ++ G
Sbjct: 350 ---VSWNSMIAGYAQNG 363


>ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124360495|gb|ABN08505.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355499041|gb|AES80244.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 646

 Score =  176 bits (445), Expect = 4e-42
 Identities = 90/167 (53%), Positives = 126/167 (75%), Gaps = 8/167 (4%)
 Frame = -3

Query: 482 KDEACHLFGLMPE----RNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSG 315
           ++EA  LF +M +    RNV++WT MI+G++K+G+L+ +   F++MP +SVVSWNAMLSG
Sbjct: 181 EEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSG 240

Query: 314 YAQNGFVKQAMKLFEEMMDAG-IQPDETTWVTIISSCSEQGDPRLAKSLVGLL-ETRKIH 141
           YAQ G  ++ ++LF +M+  G +QPDETTWVT+ISSCS  GDP L++S+V  L +T    
Sbjct: 241 YAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFR 300

Query: 140 MNCFVKTALIDMYAKCGNIETARCIFDEMGV--HRNPVSWNAMISAY 6
            N FVKTAL+DM+AKCGN+E A  IF+++GV  +R+ V WNAMISAY
Sbjct: 301 PNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAY 347



 Score =  122 bits (305), Expect = 7e-26
 Identities = 62/152 (40%), Positives = 98/152 (64%), Gaps = 1/152 (0%)
 Frame = -3

Query: 458 GLMPERNVVSWTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMK 279
           G+   R+ V W AMIS Y++ GDL ++  +F++MP +  VSWN+M++GY QNG   +A+K
Sbjct: 330 GVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIK 389

Query: 278 LFEEMMDA-GIQPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMY 102
           LFEEM+ +   +PDE T V++ S+C   G+  L    V +L+   I ++  V  +LI MY
Sbjct: 390 LFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNSLISMY 449

Query: 101 AKCGNIETARCIFDEMGVHRNPVSWNAMISAY 6
           ++CG+++ A  IF EM   R+ VS+N +IS +
Sbjct: 450 SRCGSMQDAVLIFQEMAT-RDLVSYNTLISGF 480



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 45/134 (33%), Positives = 67/134 (50%)
 Frame = -3

Query: 407 YSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMMDAGIQPDETTW 228
           Y+K G +E + ++F+EMP+++V  WN M+SGY + G  ++A  LF  M D  I  +  TW
Sbjct: 144 YAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITW 203

Query: 227 VTIISSCSEQGDPRLAKSLVGLLETRKIHMNCFVKTALIDMYAKCGNIETARCIFDEMGV 48
            T+I+                                    +AK GN++TAR  FD+M  
Sbjct: 204 TTMITG-----------------------------------HAKKGNLKTARMYFDKM-P 227

Query: 47  HRNPVSWNAMISAY 6
            R+ VSWNAM+S Y
Sbjct: 228 ERSVVSWNAMLSGY 241



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 40/144 (27%), Positives = 81/144 (56%), Gaps = 4/144 (2%)
 Frame = -3

Query: 428 WTAMISGYSKQGDLENSWRVFNEMPNKSVVSWNAMLSGYAQNGFVKQAMKLFEEMMDAGI 249
           + ++IS YS+ G ++++  +F EM  + +VS+N ++SG+A++G   ++++L  +M + GI
Sbjct: 442 YNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGI 501

Query: 248 QPDETTWVTIISSCSEQGDPRLAKSLVGLLETRKI----HMNCFVKTALIDMYAKCGNIE 81
           +PD  T++ I+++CS  G   L      L E+ K     H  C     +IDM  + G +E
Sbjct: 502 EPDRITYIAILTACSHAG---LLGEGQRLFESIKFPDVDHYAC-----MIDMLGRAGRLE 553

Query: 80  TARCIFDEMGVHRNPVSWNAMISA 9
            A  +   M +  +   + ++++A
Sbjct: 554 EAMKLIQSMPMEPHAGIYGSLLNA 577