BLASTX nr result

ID: Akebia25_contig00054512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00054512
         (654 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_005109914.1| PREDICTED: ribosomal RNA-processing protein ...    57   7e-06

>ref|XP_005109914.1| PREDICTED: ribosomal RNA-processing protein 8-like [Aplysia
           californica]
          Length = 710

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 47/143 (32%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
 Frame = -1

Query: 411 GFMNNETVASGEDGAELENEVSGKKSEVGDSTMKLKMTKRGKPFSSKSKKNLVSVMKKIE 232
           G ++ + V    D A  + +    +SEV    +K    K+GK  SS S  N  +V KK++
Sbjct: 87  GSVDMDEVLEAGDMAHGKQKNKKVQSEVS-GVVKTGKKKKGKKESS-SDLNAGTVAKKVK 144

Query: 231 TSGKDIDGVELEKK------TDDEKMEVEKENGVQHMASKSKGK---SVFVNKSEKPKNV 79
            +  D DGV ++KK      TD EK+E ++    Q  A K  G    SV  N +EKPK  
Sbjct: 145 ATTNDQDGVSVQKKGKKRKLTDTEKIEEKQVTKKQKQAEKVDGTGDGSVSANTAEKPKRK 204

Query: 78  ENEEIKNGDLMNGTKHLSCKSKK 10
            N + KN    N   HL+   K+
Sbjct: 205 RNRKKKNNSKKNKYLHLALNKKE 227


Top