BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00054495
         (525 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003475889.1| replicase-associated polyprotein [Olive late...    86   5e-15
gb|ADD13602.1| replicase-associated polyprotein [Oat blue dwarf ...    80   3e-13
ref|NP_734078.1| methyltransferase/protease/helicase [oat blue d...    78   1e-12
ref|NP_044447.1| replicase-associated polyprotein [Oat blue dwar...    78   1e-12
gb|AEE61366.1| polyprotein, partial [Switchgrass mosaic virus]         73   5e-11
gb|ACV53023.1| polyprotein [Blackberry virus S]                        70   2e-10
gb|ABA54133.1| polyprotein [Citrus sudden death-associated virus]      69   5e-10
ref|YP_004464920.1| polyprotein [Switchgrass mosaic virus] gi|33...    69   9e-10
ref|YP_224292.1| methyltransferase/protease/helicase [Citrus sud...    63   5e-08
ref|YP_224218.1| replicase-associated polyprotein [Citrus sudden...    63   5e-08
emb|CDJ53588.1| hypothetical protein EBH_0007880 [Eimeria brunetti]    58   2e-06
gb|AAW33732.1| polyprotein [Grapevine rupestris vein feathering ...    56   5e-06

>ref|YP_003475889.1| replicase-associated polyprotein [Olive latent virus 3]
            gi|289467899|gb|ACN94861.2| replicase-associated
            polyprotein [Olive latent virus 3]
          Length = 2000

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 67/190 (35%), Positives = 88/190 (46%), Gaps = 15/190 (7%)
 Frame = -1

Query: 525  TAAAIPAILWAYRRFMGPDAPQAMFDQYNGYFNPKPWKLRIAQGPTKCSRGQFLPFC-PR 349
            T  AIP I  + RRF+GP++PQA+ D+Y  YF+PKPW+L + QGP   +   F P C P 
Sbjct: 604  TGVAIPIIALSIRRFLGPNSPQALLDEYQSYFHPKPWQLILEQGPIFANPEPFSPHCQPI 663

Query: 348  PNSLTQDIDSDDDIFLVNAVSIDLQTEVPEHIRSLALSKPIPFEPSEYVSDPSPA----- 184
            P+S                         P+   S  L  P P  PS   S P+P      
Sbjct: 664  PSS------------------------GPDSAPSSTLGTP-PMYPS---SPPAPVEEKTI 695

Query: 183  LVPTKMAARVSELITPEAPPSDPDHASQAP-----LPTPHEPPRTEIAPSAETPIP---- 31
            LVPT  A   +   +   PPS P  A+ AP     LPTP  PP +   P+ ET +P    
Sbjct: 696  LVPTVRALPPAPPPSSVPPPSKPSPAAPAPVTPPSLPTPVIPPLS--TPTPETRVPEVGK 753

Query: 30   SGFHSTPPPP 1
            SG  ++  PP
Sbjct: 754  SGIVASDLPP 763


>gb|ADD13602.1| replicase-associated polyprotein [Oat blue dwarf virus]
          Length = 2067

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 59/175 (33%), Positives = 73/175 (41%), Gaps = 1/175 (0%)
 Frame = -1

Query: 522 AAAIPAILWAYRRFMGPDAPQAMFDQYNGYFNPKPWKLRIAQGPTKCSRGQFLPFCPRPN 343
           A AIPA   A R F GPD PQAM D+Y+  F+P+ W+L + +GP  C R  F P  P P 
Sbjct: 501 AVAIPAASLAVRWFFGPDTPQAMHDRYHTMFHPREWRLTLPRGPISCGRSSFSPL-PHPP 559

Query: 342 SLTQDIDSDDDIFLVNAVSIDLQTEVPEHIRSLALSKPIPFEPSEYVSDPSPALVPTKMA 163
           S T   DS                      R+  L       PS   S   PA  P  + 
Sbjct: 560 SPTPAPDS----------------------RAGPLQ-----PPSALPSTHEPA--PADLE 590

Query: 162 ARVSELITPEAPPSDPDHASQA-PLPTPHEPPRTEIAPSAETPIPSGFHSTPPPP 1
           +   +   P+  P  P    +A P P P   PR    PSA  P P+   S P PP
Sbjct: 591 SPAPQAHAPQTEPPSPVIEQEARPDPFPAPAPRPAPTPSASAPSPAPTPSAPEPP 645


>ref|NP_734078.1| methyltransferase/protease/helicase [oat blue dwarf virus]
          Length = 1212

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 55/168 (32%), Positives = 73/168 (43%), Gaps = 3/168 (1%)
 Frame = -1

Query: 522 AAAIPAILWAYRRFMGPDAPQAMFDQYNGYFNPKPWKLRIAQGPTKCSRGQFLPFCPRPN 343
           A AIPA   A R F GPD PQAM D+Y+  F+P+ W+L + +GP  C R  F P  P P 
Sbjct: 501 AVAIPAASLAVRWFFGPDTPQAMHDRYHTMFHPREWRLTLPRGPISCGRSSFSPL-PHPP 559

Query: 342 SLTQDIDSDDDIFLVNAVSIDLQTEVPEHIRSLALSKPIPFEPSEYVSDPSPALVPTKMA 163
           S T   DS  +     +         P  +   A     P   +     PSP +   +  
Sbjct: 560 SPTPAPDSRAEPLQPPSAPPSTHEPAPADLEPQA-----PPAHAPQTEPPSPVI---EQE 611

Query: 162 ARVSELITP---EAPPSDPDHASQAPLPTPHEPPRTEIAPSAETPIPS 28
           AR + L  P    AP       S AP P+  EPP    +  A + IP+
Sbjct: 612 ARPNPLPAPAPLSAPTPSASAPSLAPTPSAPEPPSPTASEQAASLIPA 659


>ref|NP_044447.1| replicase-associated polyprotein [Oat blue dwarf virus]
           gi|1843580|gb|AAC57874.1| replicase-associated
           polyprotein [oat blue dwarf virus]
          Length = 2066

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 55/168 (32%), Positives = 73/168 (43%), Gaps = 3/168 (1%)
 Frame = -1

Query: 522 AAAIPAILWAYRRFMGPDAPQAMFDQYNGYFNPKPWKLRIAQGPTKCSRGQFLPFCPRPN 343
           A AIPA   A R F GPD PQAM D+Y+  F+P+ W+L + +GP  C R  F P  P P 
Sbjct: 501 AVAIPAASLAVRWFFGPDTPQAMHDRYHTMFHPREWRLTLPRGPISCGRSSFSPL-PHPP 559

Query: 342 SLTQDIDSDDDIFLVNAVSIDLQTEVPEHIRSLALSKPIPFEPSEYVSDPSPALVPTKMA 163
           S T   DS  +     +         P  +   A     P   +     PSP +   +  
Sbjct: 560 SPTPAPDSRAEPLQPPSAPPSTHEPAPADLEPQA-----PPAHAPQTEPPSPVI---EQE 611

Query: 162 ARVSELITP---EAPPSDPDHASQAPLPTPHEPPRTEIAPSAETPIPS 28
           AR + L  P    AP       S AP P+  EPP    +  A + IP+
Sbjct: 612 ARPNPLPAPAPLSAPTPSASAPSLAPTPSAPEPPSPTASEQAASLIPA 659


>gb|AEE61366.1| polyprotein, partial [Switchgrass mosaic virus]
          Length = 684

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 4/174 (2%)
 Frame = -1

Query: 519 AAIPAILWAYRRFMGPDAPQAMFDQYNGYFNPKPWKLRIAQGPTKCSRGQFLPFCPRPNS 340
           AA+P      R F+GPD+PQA+ DQY+  F+P  W L + +    C R  FL     P S
Sbjct: 331 AAVPLTALLVRWFLGPDSPQALHDQYHATFHPDSWSLDLPRRLRSCVREPFLLTGAAPAS 390

Query: 339 LTQDIDSDDDIFLVNAVSIDLQTEVPEHIRSLALSKPIPFEPSEYVSDPSPALVPTKMAA 160
           +              +   +  ++ P  + SL  ++  P +PS+ V  P P+ V  ++A 
Sbjct: 391 IP------------TSAPENFSSDTPRPLTSLQ-AQAEPSQPSD-VQPPRPSAVQPQVAP 436

Query: 159 RVSEL-ITPEAPPSDPDHASQAPL---PTPHEPPRTEIAPSAETPIPSGFHSTP 10
             +   I+PE   S P  A   P+   PT H PP   +A S  T  PS    TP
Sbjct: 437 EPAPAPISPEPAASLPISAEPEPVFEPPTSHSPPAQPVADSEPTSQPSSRAPTP 490


>gb|ACV53023.1| polyprotein [Blackberry virus S]
          Length = 2035

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 49/163 (30%), Positives = 73/163 (44%), Gaps = 4/163 (2%)
 Frame = -1

Query: 522 AAAIPAILWAYRRFMGPDAPQAMFDQYNGYFNPKPWKLRIAQGPTKCSRGQFLPFCPRPN 343
           AA++P  L   R+F+GPD+PQ+M D Y   F+P  W+L   + P   S   FLP    P 
Sbjct: 521 AASVPVALLLVRQFVGPDSPQSMHDAYADLFHPADWRLIFNRKPLFASPEPFLPITTVPA 580

Query: 342 SLTQDIDSDDDIFLVNAVSIDLQTEVPEHIRSLALSKPIPFEPSEYVSDPSPALVPTKMA 163
            +        D+  + +++I   +  P    SLA   P P  P     DP+PA   +  A
Sbjct: 581 PV--------DLPQIESIAIPAPSPAPPSPTSLA---PTPIPPVTSTLDPAPASA-SAPA 628

Query: 162 ARVSELITPEAPPSDPDHASQAPLPTPHE----PPRTEIAPSA 46
           A    +  P   P     A    +P+ H+    PP  E+ P+A
Sbjct: 629 ATPPAIAAPAPAPEPQAEALSLLIPSEHQPAAPPPIPELLPAA 671


>gb|ABA54133.1| polyprotein [Citrus sudden death-associated virus]
          Length = 2189

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 54/177 (30%), Positives = 78/177 (44%), Gaps = 6/177 (3%)
 Frame = -1

Query: 519  AAIPAILWAYRRFMGPDAPQAMFDQYNGYFNPKPWKLRIAQGPTKCSRGQFLPFCPRPNS 340
            A +P  L+ +R+F+GPD+PQ M D Y+  F+P+PW L +A+    C R  FLP    P+S
Sbjct: 569  ATVPVCLFLWRKFIGPDSPQDMHDSYHAMFHPQPWGLSLARKAICCDRAPFLPIPLVPSS 628

Query: 339  LTQDIDSDDDIFLVNAVSIDLQTEVPEHIRSLALSKPIPFEPSEYVSDPSPALVPTKMAA 160
                     D       +  L T +P  I+ +    P    P +  S   PA   ++ A 
Sbjct: 629  ---------DFKAPPTPATPLLTSIP--IKGVEPQVPGEGVPPQSASSTGPA-SDSRCAP 676

Query: 159  RVSELITPEAPPSDPDHASQAPLPT------PHEPPRTEIAPSAETPIPSGFHSTPP 7
            + +    P+ P  D   A QAP  +      P E   T + P A  P P    ST P
Sbjct: 677  QPASSTGPDQPAQDMSAAPQAPTKSKVTFAQPLESV-TPVVPGAGEP-PQSASSTGP 731


>ref|YP_004464920.1| polyprotein [Switchgrass mosaic virus] gi|332672309|gb|AEE25899.3|
           polyprotein [Switchgrass mosaic virus]
          Length = 2061

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 52/180 (28%), Positives = 75/180 (41%), Gaps = 10/180 (5%)
 Frame = -1

Query: 519 AAIPAILWAYRRFMGPDAPQAMFDQYNGYFNPKPWKLRIAQGPTKCSRGQFLPFCPRPNS 340
           AA+P      R F+GPD+PQA+ DQY+  F+P  W L + +    C R  FL     P S
Sbjct: 490 AAVPLTALLVRWFLGPDSPQALHDQYHATFHPDSWSLDLPRRLRSCVREPFLLTGAAPAS 549

Query: 339 LTQDIDSDDDIFLVNAVSIDLQTEVPEHIRSLALSKPIPFEPSEYVSDPSPALVPTKMAA 160
                          +   +   + P  + SL  ++  P +PS+ V  P P+ V  ++A 
Sbjct: 550 TP------------TSAPENFSPDTPRPLTSLR-AQAEPSQPSD-VQPPKPSAVQPQVAP 595

Query: 159 RVSELITPEAPPSDPDHASQAPL----------PTPHEPPRTEIAPSAETPIPSGFHSTP 10
                  P   P  P+ A+  P+          PT H PP   +A S  T  PS    TP
Sbjct: 596 E------PAPAPISPEPAASLPISAEPESVFEPPTSHSPPAQPVADSEPTSQPSSRAPTP 649


>ref|YP_224292.1| methyltransferase/protease/helicase [Citrus sudden death-associated
            virus]
          Length = 1371

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 5/176 (2%)
 Frame = -1

Query: 519  AAIPAILWAYRRFMGPDAPQAMFDQYNGYFNPKPWKLRIAQGPTKCSRGQFLPFCPRPNS 340
            AA+P  L+ +R+F+GPD+PQ M D Y+  F+P+PW L + +    C R  FLP    P+S
Sbjct: 569  AAVPVCLFLWRKFIGPDSPQDMHDSYHAMFHPQPWGLTLTRKAICCDRAPFLPIPVVPSS 628

Query: 339  LTQDIDSDDDIFLVNAVSIDLQTEVPEHIRSLALSKPIPFEPSEYVSDPSPALVPTKMAA 160
                     D       +  L T +P  I+ +         P +  S   PA   ++ A 
Sbjct: 629  ---------DFKAPPTPATPLLTSIP--IKGVEPQVSGEGVPPQSASSTGPA-SDSRRAP 676

Query: 159  RVSELITPEAPPSDPDHASQAPLP---TPHEPPRT--EIAPSAETPIPSGFHSTPP 7
            + +    P+ P  +   A Q P+    T  +P  +   + P A  P P    ST P
Sbjct: 677  QPASSTGPDPPTQNTSAAPQPPIESKVTFAQPIESVAPVVPGAGEP-PQSASSTGP 731


>ref|YP_224218.1| replicase-associated polyprotein [Citrus sudden death-associated
            virus] gi|59609791|gb|AAW88343.1| replicase-associated
            polyprotein [Citrus sudden death-associated virus]
          Length = 2188

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 5/176 (2%)
 Frame = -1

Query: 519  AAIPAILWAYRRFMGPDAPQAMFDQYNGYFNPKPWKLRIAQGPTKCSRGQFLPFCPRPNS 340
            AA+P  L+ +R+F+GPD+PQ M D Y+  F+P+PW L + +    C R  FLP    P+S
Sbjct: 569  AAVPVCLFLWRKFIGPDSPQDMHDSYHAMFHPQPWGLTLTRKAICCDRAPFLPIPVVPSS 628

Query: 339  LTQDIDSDDDIFLVNAVSIDLQTEVPEHIRSLALSKPIPFEPSEYVSDPSPALVPTKMAA 160
                     D       +  L T +P  I+ +         P +  S   PA   ++ A 
Sbjct: 629  ---------DFKAPPTPATPLLTSIP--IKGVEPQVSGEGVPPQSASSTGPA-SDSRRAP 676

Query: 159  RVSELITPEAPPSDPDHASQAPLP---TPHEPPRT--EIAPSAETPIPSGFHSTPP 7
            + +    P+ P  +   A Q P+    T  +P  +   + P A  P P    ST P
Sbjct: 677  QPASSTGPDPPTQNTSAAPQPPIESKVTFAQPIESVAPVVPGAGEP-PQSASSTGP 731


>emb|CDJ53588.1| hypothetical protein EBH_0007880 [Eimeria brunetti]
          Length = 1574

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 36/91 (39%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
 Frame = -1

Query: 264  PEHIRSLALSKPIPFEPSEYVSDPSPALVPTKMAARVSELITPEAPPSDPDHASQAPLPT 85
            P   R+   S P P  PS   S PSP+  P    A  S  ++P  PPS P   + +PLP+
Sbjct: 1181 PTPSRASPASSPSPSSPSPSPSYPSPSPPPPPTPAATS--LSPSPPPSPPRPPAPSPLPS 1238

Query: 84   PHEPPRTEI---APSAETPIPSGFHSTPPPP 1
            P  PP T      PS  TP  S   +TPPPP
Sbjct: 1239 PLPPPPTPSPGPTPSPRTPTTSFRFNTPPPP 1269


>gb|AAW33732.1| polyprotein [Grapevine rupestris vein feathering virus]
          Length = 2068

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 45/162 (27%), Positives = 68/162 (41%), Gaps = 4/162 (2%)
 Frame = -1

Query: 510  PAILWAYRRFMGPDAPQAMFDQYNGYFNPKPWKLRIAQGPTKC--SRGQFLPFCPRPNSL 337
            P +L   R F+GPD+PQ+M D YN YF+P  W+L + + P     S   FLP    P  L
Sbjct: 620  PPLLLMIRSFVGPDSPQSMSDAYNRYFHPSRWELSLERSPASVIPSPPAFLPSGTAPTPL 679

Query: 336  -TQDIDSDDDIFLVNAVSIDLQTEVP-EHIRSLALSKPIPFEPSEYVSDPSPALVPTKMA 163
              +  DS  ++ LV +  +   +  P E    L+  +  P  P    S       P+ + 
Sbjct: 680  EPRPADSPLEVPLVPSPRLHPDSPPPAEKQPELSPCEAAPAAPVLDASSKKAEETPSGLD 739

Query: 162  ARVSELITPEAPPSDPDHASQAPLPTPHEPPRTEIAPSAETP 37
               + ++  + P          P+    EPPR     SA  P
Sbjct: 740  MSATTILEAKVP---------VPVSRADEPPRPSDLLSASEP 772