BLASTX nr result
ID: Akebia25_contig00054334
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00054334
(383 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 111 1e-22
ref|XP_002519063.1| pentatricopeptide repeat-containing protein,... 98 1e-18
ref|XP_006377358.1| pentatricopeptide repeat-containing family p... 97 2e-18
ref|XP_007213206.1| hypothetical protein PRUPE_ppb012387mg [Prun... 96 4e-18
ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_002305798.2| pentatricopeptide repeat-containing family p... 91 1e-16
ref|XP_006449336.1| hypothetical protein CICLE_v100181752mg, par... 90 4e-16
ref|XP_006467801.1| PREDICTED: pentatricopeptide repeat-containi... 89 6e-16
gb|EXC18115.1| hypothetical protein L484_014516 [Morus notabilis] 87 2e-15
ref|XP_007025629.1| Pentatricopeptide repeat superfamily protein... 86 5e-15
gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsu... 86 7e-15
ref|XP_004505055.1| PREDICTED: pentatricopeptide repeat-containi... 81 1e-13
ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containi... 81 2e-13
ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containi... 79 7e-13
ref|NP_180932.1| pentatricopeptide repeat-containing protein [Ar... 77 3e-12
ref|XP_007159386.1| hypothetical protein PHAVU_002G233900g [Phas... 77 3e-12
ref|XP_006296191.1| hypothetical protein CARUB_v10025353mg [Caps... 77 3e-12
ref|XP_002879469.1| pentatricopeptide repeat-containing protein ... 75 1e-11
ref|XP_006410519.1| hypothetical protein EUTSA_v10016424mg [Eutr... 74 2e-11
>ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33760-like [Vitis vinifera]
Length = 561
Score = 111 bits (277), Expect = 1e-22
Identities = 57/87 (65%), Positives = 63/87 (72%)
Frame = +1
Query: 118 QNQPTLPSPSHSPTYQSLLQAGPRLKPLQQVHAHIIVSGLNRSRXXXXXXXXXXXXXGSI 297
Q T SPSHSP YQ LL AGPRLKPLQQVHAH+IVSG RSR GSI
Sbjct: 8 QTLQTTLSPSHSPAYQVLLHAGPRLKPLQQVHAHLIVSGSYRSRALLTKLLTLACTAGSI 67
Query: 298 IYTRQLFFSIPNPDSFLFSSLVKASSK 378
+YTRQLFFSI NPDSFLF++++KASSK
Sbjct: 68 LYTRQLFFSITNPDSFLFNAIIKASSK 94
>ref|XP_002519063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541726|gb|EEF43274.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 386
Score = 97.8 bits (242), Expect = 1e-18
Identities = 54/92 (58%), Positives = 63/92 (68%)
Frame = +1
Query: 103 MEPKQQNQPTLPSPSHSPTYQSLLQAGPRLKPLQQVHAHIIVSGLNRSRXXXXXXXXXXX 282
ME KQ Q LP HSP Y LLQAGPRLKPLQQVHA++IVSG SR
Sbjct: 1 METKQFCQ--LP---HSPAYHFLLQAGPRLKPLQQVHAYVIVSGSGHSRSLLTKLLNLAC 55
Query: 283 XXGSIIYTRQLFFSIPNPDSFLFSSLVKASSK 378
GSIIYTRQ+F S+ NPDSFLF++L+K++SK
Sbjct: 56 AAGSIIYTRQIFLSVANPDSFLFNTLIKSTSK 87
>ref|XP_006377358.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550327646|gb|ERP55155.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 585
Score = 97.4 bits (241), Expect = 2e-18
Identities = 54/93 (58%), Positives = 63/93 (67%)
Frame = +1
Query: 103 MEPKQQNQPTLPSPSHSPTYQSLLQAGPRLKPLQQVHAHIIVSGLNRSRXXXXXXXXXXX 282
ME KQ ++ LP HSP Y LLQAGPRL L QVHAHIIVSG RSR
Sbjct: 1 METKQPHK--LP---HSPAYNFLLQAGPRLYLLHQVHAHIIVSGYGRSRSLLTKLLNLAC 55
Query: 283 XXGSIIYTRQLFFSIPNPDSFLFSSLVKASSKS 381
GSI YTRQ+F ++PNPDSFLF+SL+K++SKS
Sbjct: 56 AAGSISYTRQIFLAVPNPDSFLFTSLIKSTSKS 88
>ref|XP_007213206.1| hypothetical protein PRUPE_ppb012387mg [Prunus persica]
gi|462409071|gb|EMJ14405.1| hypothetical protein
PRUPE_ppb012387mg [Prunus persica]
Length = 588
Score = 96.3 bits (238), Expect = 4e-18
Identities = 52/92 (56%), Positives = 62/92 (67%)
Frame = +1
Query: 103 MEPKQQNQPTLPSPSHSPTYQSLLQAGPRLKPLQQVHAHIIVSGLNRSRXXXXXXXXXXX 282
ME KQ T S SP Y++LL+AGP L+ LQQVH HI+VSG +RSR
Sbjct: 1 MEAKQL-AVTGSSTPQSPVYRALLRAGPSLRALQQVHGHIVVSGSHRSRALLTKLITLAC 59
Query: 283 XXGSIIYTRQLFFSIPNPDSFLFSSLVKASSK 378
GSI YTR+LF S+PNPDSFLF+SL+KASSK
Sbjct: 60 EAGSIFYTRRLFLSVPNPDSFLFNSLIKASSK 91
>ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 94.0 bits (232), Expect = 2e-17
Identities = 46/78 (58%), Positives = 58/78 (74%)
Frame = +1
Query: 145 SHSPTYQSLLQAGPRLKPLQQVHAHIIVSGLNRSRXXXXXXXXXXXXXGSIIYTRQLFFS 324
SHSP +++LL++GPRL+ LQQVHAHIIVSGL+RSR GSI Y R+LF +
Sbjct: 89 SHSPVHEALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPT 148
Query: 325 IPNPDSFLFSSLVKASSK 378
+PNPDSFLF SL+K +SK
Sbjct: 149 VPNPDSFLFDSLLKVTSK 166
>ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 94.0 bits (232), Expect = 2e-17
Identities = 46/78 (58%), Positives = 58/78 (74%)
Frame = +1
Query: 145 SHSPTYQSLLQAGPRLKPLQQVHAHIIVSGLNRSRXXXXXXXXXXXXXGSIIYTRQLFFS 324
SHSP +++LL++GPRL+ LQQVHAHIIVSGL+RSR GSI Y R+LF +
Sbjct: 25 SHSPVHEALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPT 84
Query: 325 IPNPDSFLFSSLVKASSK 378
+PNPDSFLF SL+K +SK
Sbjct: 85 VPNPDSFLFDSLLKVTSK 102
>ref|XP_002305798.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550340302|gb|EEE86309.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 591
Score = 91.3 bits (225), Expect = 1e-16
Identities = 45/77 (58%), Positives = 53/77 (68%)
Frame = +1
Query: 148 HSPTYQSLLQAGPRLKPLQQVHAHIIVSGLNRSRXXXXXXXXXXXXXGSIIYTRQLFFSI 327
HSP Y LLQAGPRLK L QVHAH+IVSG SR GSI YTRQ+F +
Sbjct: 11 HSPAYNLLLQAGPRLKLLHQVHAHVIVSGYGCSRFLLTKLLNLACAAGSISYTRQIFLIV 70
Query: 328 PNPDSFLFSSLVKASSK 378
PNPDSFLF+SL++++SK
Sbjct: 71 PNPDSFLFTSLIRSTSK 87
>ref|XP_006449336.1| hypothetical protein CICLE_v100181752mg, partial [Citrus
clementina] gi|557551947|gb|ESR62576.1| hypothetical
protein CICLE_v100181752mg, partial [Citrus clementina]
Length = 226
Score = 89.7 bits (221), Expect = 4e-16
Identities = 42/78 (53%), Positives = 56/78 (71%)
Frame = +1
Query: 148 HSPTYQSLLQAGPRLKPLQQVHAHIIVSGLNRSRXXXXXXXXXXXXXGSIIYTRQLFFSI 327
HSP Y+++L+AGPRLKPLQ+VHAH+IVSG RSR G I Y +++FF I
Sbjct: 7 HSPAYEAILKAGPRLKPLQKVHAHLIVSGYGRSRSILTKLLSLVCDAGFITYAQRIFFCI 66
Query: 328 PNPDSFLFSSLVKASSKS 381
P+PDSFLF++L+ +SKS
Sbjct: 67 PSPDSFLFNTLIIRNSKS 84
>ref|XP_006467801.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Citrus sinensis]
Length = 580
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/78 (52%), Positives = 56/78 (71%)
Frame = +1
Query: 148 HSPTYQSLLQAGPRLKPLQQVHAHIIVSGLNRSRXXXXXXXXXXXXXGSIIYTRQLFFSI 327
HSP Y+++L+AGPRLKPLQQVHAH+IV+G RSR G I Y +++FF I
Sbjct: 7 HSPAYEAILKAGPRLKPLQQVHAHLIVAGYGRSRSMLTKLLSLVCDAGFITYAQRIFFCI 66
Query: 328 PNPDSFLFSSLVKASSKS 381
P+PDSFLF++L+ +SK+
Sbjct: 67 PSPDSFLFNTLIIRNSKA 84
>gb|EXC18115.1| hypothetical protein L484_014516 [Morus notabilis]
Length = 586
Score = 87.0 bits (214), Expect = 2e-15
Identities = 42/79 (53%), Positives = 56/79 (70%)
Frame = +1
Query: 145 SHSPTYQSLLQAGPRLKPLQQVHAHIIVSGLNRSRXXXXXXXXXXXXXGSIIYTRQLFFS 324
+HSP +++LL+AG R++PLQQ HAHI+VSG +RSR GSI Y +L +S
Sbjct: 12 AHSPAHEALLRAGSRIRPLQQAHAHIVVSGSHRSRALLTKLLTLACKAGSIGYAHRLLYS 71
Query: 325 IPNPDSFLFSSLVKASSKS 381
+ NPD+FLF+SLVKASS S
Sbjct: 72 VRNPDAFLFNSLVKASSSS 90
>ref|XP_007025629.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508780995|gb|EOY28251.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 905
Score = 85.9 bits (211), Expect = 5e-15
Identities = 47/96 (48%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Frame = +1
Query: 94 QFSMEPKQQNQPTLPSPSHSPTYQSLLQAGPRLKPLQQVHAHIIVSGLNRSRXXXXXXXX 273
Q ME KQ ++ P SHSPTY+++L+AGPRLKPLQQVHA I+++GL S+
Sbjct: 315 QCYMEAKQLHRA--PPSSHSPTYRAILRAGPRLKPLQQVHARIVITGLGHSQSLITKLLS 372
Query: 274 XXXXXGS-IIYTRQLFFSIPNPDSFLFSSLVKASSK 378
S + YTR+LF SI PD+FLF SL+ +SK
Sbjct: 373 FACAATSPVCYTRRLFLSISKPDTFLFHSLITLTSK 408
>gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat
protein [Gossypium hirsutum]
Length = 592
Score = 85.5 bits (210), Expect = 7e-15
Identities = 43/79 (54%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = +1
Query: 145 SHSPTYQSLLQAGPRLKPLQQVHAHIIVSGLNRSRXXXXXXXXXXXXXGS-IIYTRQLFF 321
+HSP Y S++ AGPRLKPLQQ+HA II++GL R+R S I YTR+LFF
Sbjct: 17 THSPIYHSIILAGPRLKPLQQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFF 76
Query: 322 SIPNPDSFLFSSLVKASSK 378
SIP PD+FLF SL+ +SK
Sbjct: 77 SIPKPDTFLFHSLITLTSK 95
>ref|XP_004505055.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cicer arietinum]
Length = 587
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/76 (50%), Positives = 53/76 (69%)
Frame = +1
Query: 151 SPTYQSLLQAGPRLKPLQQVHAHIIVSGLNRSRXXXXXXXXXXXXXGSIIYTRQLFFSIP 330
S Y+++++AGP ++PLQQ HAH+IV+G RS+ GSI YTR+LF S+
Sbjct: 14 SAEYEAVIRAGPHVRPLQQAHAHLIVTGCYRSKALLTKLLTLSCAAGSIAYTRRLFLSVT 73
Query: 331 NPDSFLFSSLVKASSK 378
PDSFLF+SL+KASS+
Sbjct: 74 GPDSFLFNSLIKASSQ 89
>ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +1
Query: 151 SPTYQSLLQAGPRLKPLQQVHAHIIVSGLNRSRXXXXXXXXXXXXXGSIIYTRQLFFSIP 330
S Y++++ AGP L+ LQQ HAH++V+G +RSR GSI YTR+LF S+
Sbjct: 10 SAEYEAVVSAGPHLRRLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVS 69
Query: 331 NPDSFLFSSLVKASSK 378
+PDSFLF+SL+KASSK
Sbjct: 70 DPDSFLFNSLIKASSK 85
>ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like isoform X1 [Glycine max]
gi|571467023|ref|XP_006583818.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g33760-like isoform X2 [Glycine max]
Length = 582
Score = 79.0 bits (193), Expect = 7e-13
Identities = 38/75 (50%), Positives = 52/75 (69%)
Frame = +1
Query: 151 SPTYQSLLQAGPRLKPLQQVHAHIIVSGLNRSRXXXXXXXXXXXXXGSIIYTRQLFFSIP 330
S Y++++ AGP L+ LQQ HAH++V+G +RSR GSI YTR+LF S+
Sbjct: 10 SAEYEAVVSAGPHLRRLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVS 69
Query: 331 NPDSFLFSSLVKASS 375
+PDSFLF+SL+KASS
Sbjct: 70 DPDSFLFNSLIKASS 84
>ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g33760 gi|1707020|gb|AAC69141.1| hypothetical protein
[Arabidopsis thaliana] gi|330253787|gb|AEC08881.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 583
Score = 77.0 bits (188), Expect = 3e-12
Identities = 36/78 (46%), Positives = 53/78 (67%)
Frame = +1
Query: 145 SHSPTYQSLLQAGPRLKPLQQVHAHIIVSGLNRSRXXXXXXXXXXXXXGSIIYTRQLFFS 324
++S Y+++++AGPR+K LQQVHAH+IV+G RSR +I YT LF S
Sbjct: 7 ANSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLS 66
Query: 325 IPNPDSFLFSSLVKASSK 378
+P PD FLF+S++K++SK
Sbjct: 67 VPLPDDFLFNSVIKSTSK 84
>ref|XP_007159386.1| hypothetical protein PHAVU_002G233900g [Phaseolus vulgaris]
gi|561032801|gb|ESW31380.1| hypothetical protein
PHAVU_002G233900g [Phaseolus vulgaris]
Length = 582
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/73 (52%), Positives = 52/73 (71%)
Frame = +1
Query: 160 YQSLLQAGPRLKPLQQVHAHIIVSGLNRSRXXXXXXXXXXXXXGSIIYTRQLFFSIPNPD 339
Y+++++AG LK LQQ HAH++V+G +RSR GSI YTR+LF S+ +PD
Sbjct: 13 YEAVVRAGRDLKRLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPD 72
Query: 340 SFLFSSLVKASSK 378
+FLF+SLVKASSK
Sbjct: 73 AFLFNSLVKASSK 85
>ref|XP_006296191.1| hypothetical protein CARUB_v10025353mg [Capsella rubella]
gi|482564899|gb|EOA29089.1| hypothetical protein
CARUB_v10025353mg [Capsella rubella]
Length = 579
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/78 (46%), Positives = 53/78 (67%)
Frame = +1
Query: 145 SHSPTYQSLLQAGPRLKPLQQVHAHIIVSGLNRSRXXXXXXXXXXXXXGSIIYTRQLFFS 324
++S Y+++++AGPR+K LQQVHAH+IV+G RSR +I YT LF S
Sbjct: 3 ANSAAYEAVVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLS 62
Query: 325 IPNPDSFLFSSLVKASSK 378
+P PD FLF+S++K++SK
Sbjct: 63 VPLPDDFLFNSVIKSTSK 80
>ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325308|gb|EFH55728.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 583
Score = 74.7 bits (182), Expect = 1e-11
Identities = 35/78 (44%), Positives = 52/78 (66%)
Frame = +1
Query: 145 SHSPTYQSLLQAGPRLKPLQQVHAHIIVSGLNRSRXXXXXXXXXXXXXGSIIYTRQLFFS 324
++S Y+++++AGPR+K LQQVHAH+IV+ RSR +I YT LF S
Sbjct: 7 ANSAAYEAIVRAGPRVKQLQQVHAHLIVTSYGRSRSLLTKLITLACSARAIAYTHLLFLS 66
Query: 325 IPNPDSFLFSSLVKASSK 378
+P PD FLF+S++K++SK
Sbjct: 67 VPLPDDFLFNSVIKSTSK 84
>ref|XP_006410519.1| hypothetical protein EUTSA_v10016424mg [Eutrema salsugineum]
gi|557111688|gb|ESQ51972.1| hypothetical protein
EUTSA_v10016424mg [Eutrema salsugineum]
Length = 583
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/78 (44%), Positives = 49/78 (62%)
Frame = +1
Query: 145 SHSPTYQSLLQAGPRLKPLQQVHAHIIVSGLNRSRXXXXXXXXXXXXXGSIIYTRQLFFS 324
++S Y+++++AGPRL LQQVH H IV+G RSR +I YT LF S
Sbjct: 7 ANSAAYEAIIRAGPRLNQLQQVHGHFIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLS 66
Query: 325 IPNPDSFLFSSLVKASSK 378
+P PD FLF+S++K +SK
Sbjct: 67 VPLPDDFLFNSVIKTTSK 84