BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00053737
         (967 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containi...   251   4e-64
gb|EXC20587.1| hypothetical protein L484_027142 [Morus notabilis]     250   5e-64
emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]   250   5e-64
ref|XP_007051476.1| Pentatricopeptide repeat (PPR-like) superfam...   249   1e-63
ref|XP_006491330.1| PREDICTED: pentatricopeptide repeat-containi...   246   8e-63
ref|XP_006444781.1| hypothetical protein CICLE_v10024306mg [Citr...   245   2e-62
ref|XP_002523294.1| pentatricopeptide repeat-containing protein,...   242   1e-61
ref|XP_004230006.1| PREDICTED: pentatricopeptide repeat-containi...   238   4e-60
ref|XP_004308728.1| PREDICTED: pentatricopeptide repeat-containi...   236   1e-59
ref|XP_002317747.2| hypothetical protein POPTR_0012s01390g, part...   236   1e-59
ref|XP_006339749.1| PREDICTED: pentatricopeptide repeat-containi...   235   2e-59
ref|XP_007220019.1| hypothetical protein PRUPE_ppa003879mg [Prun...   230   6e-58
ref|XP_006400179.1| hypothetical protein EUTSA_v10013226mg [Eutr...   229   1e-57
ref|XP_006832985.1| hypothetical protein AMTR_s00221p00020810 [A...   229   2e-57
ref|XP_006287468.1| hypothetical protein CARUB_v10000680mg [Caps...   222   2e-55
ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containi...   221   4e-55
ref|NP_197146.1| pentatricopeptide repeat-containing protein [Ar...   220   8e-55
ref|XP_002871717.1| pentatricopeptide repeat-containing protein ...   219   1e-54
ref|XP_003623067.1| Pentatricopeptide repeat-containing protein ...   209   1e-51
ref|XP_003613759.1| Pentatricopeptide repeat-containing protein ...   203   1e-49

>ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Vitis vinifera]
           gi|296089757|emb|CBI39576.3| unnamed protein product
           [Vitis vinifera]
          Length = 586

 Score =  251 bits (640), Expect = 4e-64
 Identities = 118/187 (63%), Positives = 144/187 (77%), Gaps = 2/187 (1%)
 Frame = +2

Query: 5   ACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLISG 184
           AC++WKKLL+KNCTPDNAI+STLI+W+ K+GK+WEARKLFDEFEKGSIPS LTYN LI+G
Sbjct: 400 ACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTLTYNALIAG 459

Query: 185 MCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPN 364
           MCE GEL EA RLWD+MVEKGCVPN F+YNMLI GFCK G A EG+R+ EEML+  C+PN
Sbjct: 460 MCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPN 519

Query: 365 KFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVT--GESDSWRPVF 538
           K TY+IL+E LY  G+E E + +L +A+S GG+  D +CW +F  K    G  D      
Sbjct: 520 KATYAILLEGLYELGLEGEVTNVLSMASSRGGV--DAECWGVFLAKFVNGGNIDVEGAKI 577

Query: 539 DGILSET 559
           D IL E+
Sbjct: 578 DRILVES 584



 Score = 80.9 bits (198), Expect = 7e-13
 Identities = 43/144 (29%), Positives = 80/144 (55%), Gaps = 7/144 (4%)
 Frame = +2

Query: 26  LLRKNC------TPDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISG 184
           L+ KNC       P+    + L+  + KK  I  A ++ +E    G IP+V+TY T++ G
Sbjct: 226 LMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGG 285

Query: 185 MCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPN 364
              +G++  A R++ +++++G VP+  +Y +L++G+CK G+  + V++ +EM E    PN
Sbjct: 286 YVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPN 345

Query: 365 KFTYSILVESLYGSGMEEEASKLL 436
             TY +++E+        E   LL
Sbjct: 346 DVTYGVIIEAYCKEKKSGEVLNLL 369



 Score = 74.3 bits (181), Expect = 7e-11
 Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
 Frame = +2

Query: 47  PDNAISSTLIYWVSKKGKIWEARKLFDEF-EKGSIPSVLTYNTLISGMCERGELQEAGRL 223
           P+    +T++     KG +  AR++F E  ++G +P   TY  L+ G C++G   +A ++
Sbjct: 274 PNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKV 333

Query: 224 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 403
            D+M E    PN  +Y ++I  +CK  K+ E + + ++MLEK+ +P+      +++ L  
Sbjct: 334 MDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCE 393

Query: 404 SGMEEEASKL 433
            G  E A +L
Sbjct: 394 EGKVEVACEL 403



 Score = 71.6 bits (174), Expect = 4e-10
 Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
 Frame = +2

Query: 14  VWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSI-PSVLTYNTLISGMC 190
           V+ ++L +   PD    + L+    KKG+  +A K+ DE E+  + P+ +TY  +I   C
Sbjct: 298 VFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYC 357

Query: 191 ERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKF 370
           +  +  E   L DDM+EK  +P+      +I+  C+ GK      +++++L+K C P+  
Sbjct: 358 KEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNA 417

Query: 371 TYSILVESLYGSGMEEEASKL 433
             S L+  L   G   EA KL
Sbjct: 418 ITSTLIHWLCKEGKVWEARKL 438


>gb|EXC20587.1| hypothetical protein L484_027142 [Morus notabilis]
          Length = 531

 Score =  250 bits (639), Expect = 5e-64
 Identities = 121/185 (65%), Positives = 143/185 (77%)
 Frame = +2

Query: 2   EACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLIS 181
           +AC++WK+LL+ NCTPDNAISSTLIYW+ KKGK+WEARKLFD+FEKGSIPS+LTYNTLI+
Sbjct: 349 DACELWKRLLKNNCTPDNAISSTLIYWLCKKGKVWEARKLFDQFEKGSIPSILTYNTLIA 408

Query: 182 GMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVP 361
           GMCE GEL EAGRLWDDMVEKGC PN F+YNMLI GFC  GKA EG+RI EEML K C P
Sbjct: 409 GMCEEGELCEAGRLWDDMVEKGCAPNSFTYNMLIKGFCNTGKAEEGIRILEEMLCKGCSP 468

Query: 362 NKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGESDSWRPVFD 541
            K TY +L++ L     E E +K+L +A SS  I  DNDCW IF   + G+ D+   V +
Sbjct: 469 GKSTYGMLIDGL--RRKEGEVTKVLSVAMSSREI--DNDCWDIFFATMIGDLDTGATVLE 524

Query: 542 GILSE 556
            ILSE
Sbjct: 525 KILSE 529



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 38/131 (29%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
 Frame = +2

Query: 47  PDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCERGELQEAGRL 223
           P+    + LI  +  K  +  AR++ DE    G +P+V+TY T++ G   RG++  A R+
Sbjct: 189 PNVFTCNILIKALCNKNDMEGARRVLDEMPAMGMVPNVVTYTTIMGGHVSRGDMVGAKRV 248

Query: 224 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 403
           + +++++G +P+  +Y +L++G+ K G+ ++ +++ +EM E   +PN  TY +++E+   
Sbjct: 249 FGEILDRGWLPDATTYTILMDGYVKIGRLADAIKVMDEMEENGVLPNDVTYGVMIEAYCK 308

Query: 404 SGMEEEASKLL 436
                EA  LL
Sbjct: 309 GNKSGEALNLL 319



 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 37/130 (28%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
 Frame = +2

Query: 47  PDNAISSTLIYWVSKKGKIWEARKLFDEF-EKGSIPSVLTYNTLISGMCERGELQEAGRL 223
           P+    +T++     +G +  A+++F E  ++G +P   TY  L+ G  + G L +A ++
Sbjct: 224 PNVVTYTTIMGGHVSRGDMVGAKRVFGEILDRGWLPDATTYTILMDGYVKIGRLADAIKV 283

Query: 224 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 403
            D+M E G +PN  +Y ++I  +CK  K+ E + + E+MLE + +P+      +++ L  
Sbjct: 284 MDEMEENGVLPNDVTYGVMIEAYCKGNKSGEALNLLEDMLEGKYIPSSALCCKVIDVLCQ 343

Query: 404 SGMEEEASKL 433
            G  E+A +L
Sbjct: 344 QGKVEDACEL 353



 Score = 67.8 bits (164), Expect = 6e-09
 Identities = 36/113 (31%), Positives = 61/113 (53%)
 Frame = +2

Query: 140 GSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEG 319
           G +P+V T N LI  +C + +++ A R+ D+M   G VPNV +Y  ++ G    G     
Sbjct: 186 GVVPNVFTCNILIKALCNKNDMEGARRVLDEMPAMGMVPNVVTYTTIMGGHVSRGDMVGA 245

Query: 320 VRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDND 478
            R+F E+L++  +P+  TY+IL++     G   +A K++     +G   L ND
Sbjct: 246 KRVFGEILDRGWLPDATTYTILMDGYVKIGRLADAIKVMDEMEENG--VLPND 296


>emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
          Length = 844

 Score =  250 bits (639), Expect = 5e-64
 Identities = 112/168 (66%), Positives = 138/168 (82%)
 Frame = +2

Query: 5   ACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLISG 184
           AC++WKKLL+KNCTPDNAI+STLI+W+ K+GK+WEARKLFDEFEKGSIPS LTYN LI+G
Sbjct: 400 ACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTLTYNALIAG 459

Query: 185 MCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPN 364
           MCE GEL EA RLWD+MVEKGCVPN F+YNMLI GFCK G A EG+R+ EEML+  C+PN
Sbjct: 460 MCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPN 519

Query: 365 KFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVT 508
           K TY+IL+E LY  G+E E + +L +A+S GG+  D +CW +F  K +
Sbjct: 520 KATYAILLEGLYELGLEGEVTNVLSMASSRGGV--DAECWGVFLAKTS 565



 Score = 80.9 bits (198), Expect = 7e-13
 Identities = 43/144 (29%), Positives = 80/144 (55%), Gaps = 7/144 (4%)
 Frame = +2

Query: 26  LLRKNC------TPDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISG 184
           L+ KNC       P+    + L+  + KK  I  A ++ +E    G IP+V+TY T++ G
Sbjct: 226 LMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGG 285

Query: 185 MCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPN 364
              +G++  A R++ +++++G VP+  +Y +L++G+CK G+  + V++ +EM E    PN
Sbjct: 286 YVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPN 345

Query: 365 KFTYSILVESLYGSGMEEEASKLL 436
             TY +++E+        E   LL
Sbjct: 346 DVTYGVIIEAYCKEKKSGEVLNLL 369



 Score = 74.3 bits (181), Expect = 7e-11
 Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
 Frame = +2

Query: 47  PDNAISSTLIYWVSKKGKIWEARKLFDEF-EKGSIPSVLTYNTLISGMCERGELQEAGRL 223
           P+    +T++     KG +  AR++F E  ++G +P   TY  L+ G C++G   +A ++
Sbjct: 274 PNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKV 333

Query: 224 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 403
            D+M E    PN  +Y ++I  +CK  K+ E + + ++MLEK+ +P+      +++ L  
Sbjct: 334 MDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCE 393

Query: 404 SGMEEEASKL 433
            G  E A +L
Sbjct: 394 EGKVEVACEL 403



 Score = 71.6 bits (174), Expect = 4e-10
 Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
 Frame = +2

Query: 14  VWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSI-PSVLTYNTLISGMC 190
           V+ ++L +   PD    + L+    KKG+  +A K+ DE E+  + P+ +TY  +I   C
Sbjct: 298 VFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYC 357

Query: 191 ERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKF 370
           +  +  E   L DDM+EK  +P+      +I+  C+ GK      +++++L+K C P+  
Sbjct: 358 KEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNA 417

Query: 371 TYSILVESLYGSGMEEEASKL 433
             S L+  L   G   EA KL
Sbjct: 418 ITSTLIHWLCKEGKVWEARKL 438


>ref|XP_007051476.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao] gi|508703737|gb|EOX95633.1| Pentatricopeptide
           repeat (PPR-like) superfamily protein [Theobroma cacao]
          Length = 545

 Score =  249 bits (636), Expect = 1e-63
 Identities = 115/186 (61%), Positives = 141/186 (75%)
 Frame = +2

Query: 2   EACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLIS 181
           E C +WKK+L+ +C PDNAI STLI+W+ KKGK+WEARK+FDEFEKGS+PS+LTYNTLI+
Sbjct: 356 EGCYLWKKMLKNDCLPDNAILSTLIHWLCKKGKVWEARKMFDEFEKGSVPSLLTYNTLIN 415

Query: 182 GMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVP 361
           GMCERGEL EAG+LWDDMVEKGC PNVF+YNMLI GFCK G   EG+RI EEML+K C P
Sbjct: 416 GMCERGELNEAGKLWDDMVEKGCNPNVFTYNMLIKGFCKMGNVMEGIRILEEMLDKGCFP 475

Query: 362 NKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGESDSWRPVFD 541
           NK TYS+L+E L   G E E  K++ +A S G +  D   W +F  K+ G+ DS   V D
Sbjct: 476 NKVTYSVLIEGLQDMGKEGEVGKVVSMAMSRGRV--DGSSWDLFLTKIVGKLDSGVDVLD 533

Query: 542 GILSET 559
            +L E+
Sbjct: 534 QLLLES 539



 Score = 91.3 bits (225), Expect = 5e-16
 Identities = 43/130 (33%), Positives = 80/130 (61%), Gaps = 1/130 (0%)
 Frame = +2

Query: 47  PDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCERGELQEAGRL 223
           P+    + LI  + ++  +  A K+FDE    G +P+V+TY T++ G   RG+++ A R+
Sbjct: 196 PNVFTCNILIKALCQENDVEAAYKVFDEMPSMGMVPNVVTYTTILGGYVARGDMKNAKRV 255

Query: 224 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 403
           + +++++G VP+  +Y +L++G+C+ GK SE V++ +EM E   VPN+ TY +++E+   
Sbjct: 256 FGELLDRGWVPDATTYTVLMDGYCRLGKFSEAVKVMDEMEENGVVPNEVTYGVMIEAFCK 315

Query: 404 SGMEEEASKL 433
                EA  L
Sbjct: 316 EKKSGEALNL 325



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 42/144 (29%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
 Frame = +2

Query: 5   ACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEF-EKGSIPSVLTYNTLIS 181
           A  V+ ++      P+    +T++     +G +  A+++F E  ++G +P   TY  L+ 
Sbjct: 217 AYKVFDEMPSMGMVPNVVTYTTILGGYVARGDMKNAKRVFGELLDRGWVPDATTYTVLMD 276

Query: 182 GMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVP 361
           G C  G+  EA ++ D+M E G VPN  +Y ++I  FCK  K+ E + +F++MLE++ +P
Sbjct: 277 GYCRLGKFSEAVKVMDEMEENGVVPNEVTYGVMIEAFCKEKKSGEALNLFDDMLERKYIP 336

Query: 362 NKFTYSILVESLYGSGMEEEASKL 433
           +      +++ L   G  EE   L
Sbjct: 337 SSSLCCKVIDVLCDEGKVEEGCYL 360



 Score = 78.2 bits (191), Expect = 5e-12
 Identities = 45/141 (31%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
 Frame = +2

Query: 14  VWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMC 190
           V+ +LL +   PD    + L+    + GK  EA K+ DE E+ G +P+ +TY  +I   C
Sbjct: 255 VFGELLDRGWVPDATTYTVLMDGYCRLGKFSEAVKVMDEMEENGVVPNEVTYGVMIEAFC 314

Query: 191 ERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKF 370
           +  +  EA  L+DDM+E+  +P+      +I+  C  GK  EG  ++++ML+ +C+P+  
Sbjct: 315 KEKKSGEALNLFDDMLERKYIPSSSLCCKVIDVLCDEGKVEEGCYLWKKMLKNDCLPDNA 374

Query: 371 TYSILVESLYGSGMEEEASKL 433
             S L+  L   G   EA K+
Sbjct: 375 ILSTLIHWLCKKGKVWEARKM 395



 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 33/106 (31%), Positives = 60/106 (56%)
 Frame = +2

Query: 140 GSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEG 319
           G +P+V T N LI  +C+  +++ A +++D+M   G VPNV +Y  ++ G+   G     
Sbjct: 193 GVVPNVFTCNILIKALCQENDVEAAYKVFDEMPSMGMVPNVVTYTTILGGYVARGDMKNA 252

Query: 320 VRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSG 457
            R+F E+L++  VP+  TY++L++     G   EA K++     +G
Sbjct: 253 KRVFGELLDRGWVPDATTYTVLMDGYCRLGKFSEAVKVMDEMEENG 298


>ref|XP_006491330.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Citrus sinensis]
          Length = 571

 Score =  246 bits (629), Expect = 8e-63
 Identities = 113/183 (61%), Positives = 143/183 (78%)
 Frame = +2

Query: 2   EACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLIS 181
           +AC++WK+LLRKNC PDNAISST+I+W+ K+GKIWEA+KLFDEFE+GSIPS+LTYNTLI+
Sbjct: 387 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIA 446

Query: 182 GMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVP 361
           GMCE  EL EAGRLWDDMVEKG  PNVF+YNMLI GFCK G A EG+RI EEML+K C P
Sbjct: 447 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 506

Query: 362 NKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGESDSWRPVFD 541
           NK ++S+L+E LY SG E E  K++ +AT+SG +  ++D W     ++  + DS     D
Sbjct: 507 NKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV--ESDSWNFLLTRIVSDLDSGAGALD 564

Query: 542 GIL 550
            +L
Sbjct: 565 ELL 567



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 38/131 (29%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
 Frame = +2

Query: 47  PDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCERGELQEAGRL 223
           P+    + LI  + KK  +  A ++ DE    G +P+++T+ T++ G   RG+++ A R+
Sbjct: 227 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 286

Query: 224 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 403
           + D++++G VP+  +Y +L++G+ K G+ ++ V++ +EM +    PN+ TY +++E+   
Sbjct: 287 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 346

Query: 404 SGMEEEASKLL 436
                EA  LL
Sbjct: 347 GKKSGEARNLL 357



 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 37/130 (28%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
 Frame = +2

Query: 47  PDNAISSTLIYWVSKKGKIWEARKLF-DEFEKGSIPSVLTYNTLISGMCERGELQEAGRL 223
           P+    +T++     +G I  A+++F D  ++G +P   TY  L+ G  + G L +A ++
Sbjct: 262 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 321

Query: 224 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 403
            D+M + G  PN  +Y ++I  FCK  K+ E   + ++ML+++ VP+      +++ L  
Sbjct: 322 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 381

Query: 404 SGMEEEASKL 433
            G  E+A +L
Sbjct: 382 EGKVEDACEL 391



 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
 Frame = +2

Query: 14  VWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSI-PSVLTYNTLISGMC 190
           V+  +L +   PD    + L+    K G++ +A K+ DE E   + P+ +TY  +I   C
Sbjct: 286 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 345

Query: 191 ERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKF 370
           +  +  EA  L DDM+++  VP+      +I+  C+ GK  +   +++ +L K C+P+  
Sbjct: 346 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 405

Query: 371 TYSILVESLYGSGMEEEASKL 433
             S ++  L   G   EA KL
Sbjct: 406 ISSTIIHWLCKEGKIWEAKKL 426



 Score = 63.9 bits (154), Expect = 9e-08
 Identities = 29/104 (27%), Positives = 59/104 (56%)
 Frame = +2

Query: 146 IPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVR 325
           +P+V T N LI  +C++ +++ A R+ D+M   G VPN+ ++  ++ G+   G      R
Sbjct: 226 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 285

Query: 326 IFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSG 457
           +F ++L++  VP+  TY++L++     G   +A K++     +G
Sbjct: 286 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 329


>ref|XP_006444781.1| hypothetical protein CICLE_v10024306mg [Citrus clementina]
           gi|557547043|gb|ESR58021.1| hypothetical protein
           CICLE_v10024306mg [Citrus clementina]
          Length = 537

 Score =  245 bits (625), Expect = 2e-62
 Identities = 117/201 (58%), Positives = 151/201 (75%), Gaps = 4/201 (1%)
 Frame = +2

Query: 2   EACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLIS 181
           +AC++WK+LLRKNC PDNAISST+I+W+ K+GKIWEA+KLFDEFE+GSIPS+LTYNTLI+
Sbjct: 343 DACELWKRLLRKNCMPDNAISSTIIHWLCKEGKIWEAKKLFDEFERGSIPSLLTYNTLIA 402

Query: 182 GMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVP 361
           GMCE  EL EAGRLWDDMVEKG  PNVF+YNMLI GFCK G A EG+RI EEML+K C P
Sbjct: 403 GMCESAELTEAGRLWDDMVEKGVEPNVFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFP 462

Query: 362 NKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGESDS----WR 529
           NK ++S+L+E LY SG E E  K++ +AT+SG +  ++D W     ++  + DS      
Sbjct: 463 NKTSFSLLIEGLYESGNEGEVGKVVSMATASGSV--ESDSWNFLLTRIVSDLDSGAVNGA 520

Query: 530 PVFDGILSETDVR*IGSHIQY 592
              +G+L + +     SH+QY
Sbjct: 521 TTTNGLLVQWE----KSHLQY 537



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 38/131 (29%), Positives = 78/131 (59%), Gaps = 1/131 (0%)
 Frame = +2

Query: 47  PDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCERGELQEAGRL 223
           P+    + LI  + KK  +  A ++ DE    G +P+++T+ T++ G   RG+++ A R+
Sbjct: 183 PNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKRV 242

Query: 224 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 403
           + D++++G VP+  +Y +L++G+ K G+ ++ V++ +EM +    PN+ TY +++E+   
Sbjct: 243 FGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFCK 302

Query: 404 SGMEEEASKLL 436
                EA  LL
Sbjct: 303 GKKSGEARNLL 313



 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 37/130 (28%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
 Frame = +2

Query: 47  PDNAISSTLIYWVSKKGKIWEARKLF-DEFEKGSIPSVLTYNTLISGMCERGELQEAGRL 223
           P+    +T++     +G I  A+++F D  ++G +P   TY  L+ G  + G L +A ++
Sbjct: 218 PNLVTHTTILGGYVWRGDIENAKRVFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKV 277

Query: 224 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 403
            D+M + G  PN  +Y ++I  FCK  K+ E   + ++ML+++ VP+      +++ L  
Sbjct: 278 MDEMEDNGVEPNEVTYGVMIEAFCKGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCE 337

Query: 404 SGMEEEASKL 433
            G  E+A +L
Sbjct: 338 EGKVEDACEL 347



 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
 Frame = +2

Query: 14  VWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSI-PSVLTYNTLISGMC 190
           V+  +L +   PD    + L+    K G++ +A K+ DE E   + P+ +TY  +I   C
Sbjct: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNGVEPNEVTYGVMIEAFC 301

Query: 191 ERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKF 370
           +  +  EA  L DDM+++  VP+      +I+  C+ GK  +   +++ +L K C+P+  
Sbjct: 302 KGKKSGEARNLLDDMLQRKYVPSSALCCKVIDLLCEEGKVEDACELWKRLLRKNCMPDNA 361

Query: 371 TYSILVESLYGSGMEEEASKL 433
             S ++  L   G   EA KL
Sbjct: 362 ISSTIIHWLCKEGKIWEAKKL 382



 Score = 63.9 bits (154), Expect = 9e-08
 Identities = 29/104 (27%), Positives = 59/104 (56%)
 Frame = +2

Query: 146 IPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVR 325
           +P+V T N LI  +C++ +++ A R+ D+M   G VPN+ ++  ++ G+   G      R
Sbjct: 182 VPNVFTCNILIKALCKKDDVEGAIRVLDEMPSMGMVPNLVTHTTILGGYVWRGDIENAKR 241

Query: 326 IFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSG 457
           +F ++L++  VP+  TY++L++     G   +A K++     +G
Sbjct: 242 VFGDILDRGWVPDATTYTVLMDGYIKLGRLTDAVKVMDEMEDNG 285


>ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537382|gb|EEF39010.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 544

 Score =  242 bits (618), Expect = 1e-61
 Identities = 110/185 (59%), Positives = 139/185 (75%)
 Frame = +2

Query: 2   EACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLIS 181
           EAC++WK++L+KNC PDNAI STLI+W+ K+GK+WEARKLF EFE+G+IPS+LTYNTLI+
Sbjct: 359 EACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGAIPSLLTYNTLIA 418

Query: 182 GMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVP 361
           GMCE+GEL EAG+LWDDM+EKG  PN F+YNMLI GF K G A EG+RI EEML+  C+P
Sbjct: 419 GMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMP 478

Query: 362 NKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGESDSWRPVFD 541
           NK TY+IL+E L   GME E  K++ +A +SGG+  D+D W +F  K  G  D      D
Sbjct: 479 NKSTYAILIEELCKMGMEGEVDKVVSMAMASGGV--DSDSWDLFLNKAVGNLDRGSKALD 536

Query: 542 GILSE 556
               E
Sbjct: 537 SFFKE 541



 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 45/130 (34%), Positives = 76/130 (58%), Gaps = 1/130 (0%)
 Frame = +2

Query: 47  PDNAISSTLIYWVSKKGKIWEARKLFDE-FEKGSIPSVLTYNTLISGMCERGELQEAGRL 223
           P+    +T++   S +G +  A K+F E F++G +P   TY  L++G CE+G L +A +L
Sbjct: 234 PNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKL 293

Query: 224 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 403
            DDM E G  PN  +Y +++  +CK  KA E   + ++MLE++ VP+      +++ L  
Sbjct: 294 MDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCE 353

Query: 404 SGMEEEASKL 433
           +G  EEA +L
Sbjct: 354 AGKIEEACEL 363



 Score = 85.1 bits (209), Expect = 4e-14
 Identities = 43/141 (30%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
 Frame = +2

Query: 35  KNCT------PDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCE 193
           KNC       P+    + LI  + KK  +  A K+ DE    G IP+V+TY T++ G   
Sbjct: 189 KNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSS 248

Query: 194 RGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFT 373
           RG++  A +++ ++ ++G +P+  +Y +L+NG+C+ G+ ++ +++ ++M E    PN+ T
Sbjct: 249 RGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVT 308

Query: 374 YSILVESLYGSGMEEEASKLL 436
           Y ++VE+        EA  LL
Sbjct: 309 YGVMVEAYCKEKKAGEARNLL 329


>ref|XP_004230006.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Solanum lycopersicum]
          Length = 561

 Score =  238 bits (606), Expect = 4e-60
 Identities = 114/188 (60%), Positives = 138/188 (73%)
 Frame = +2

Query: 2   EACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLIS 181
           EACD+WKKLL KNCTPDN ISSTL++W+ KKG+I EARKLFDEFEK S PSVLTYN LI+
Sbjct: 377 EACDLWKKLLVKNCTPDNTISSTLVHWLCKKGQIREARKLFDEFEKSSSPSVLTYNMLIA 436

Query: 182 GMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVP 361
           GMCE+GEL EAGRLWDDMV+KGC+PN F+YNMLI GFCK G A EG+R+ EEML+K C P
Sbjct: 437 GMCEKGELHEAGRLWDDMVDKGCIPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLDKGCHP 496

Query: 362 NKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGESDSWRPVFD 541
           NK TYSIL++ L  S +  E  ++L LA S     +D + W +   K   +  +   V D
Sbjct: 497 NKSTYSILIKGLLDSELNAEILRVLALAASGD---VDPETWGVLVAKFVTDIQNVCAVLD 553

Query: 542 GILSETDV 565
             LSE +V
Sbjct: 554 KTLSENEV 561



 Score = 78.6 bits (192), Expect = 4e-12
 Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
 Frame = +2

Query: 29  LRKNC------TPDNAISSTLIYWVSKKGKIWEARKLFDEFE-KGSIPSVLTYNTLISGM 187
           L KNC      TP     + L+  + KK  I  A K+ DE    G +P+V++Y T++   
Sbjct: 205 LFKNCQKKLHITPSVFTCNILLNALCKKDDINSATKVLDEMPVMGIVPNVVSYTTILGCY 264

Query: 188 CERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNK 367
              G+L  A R++D++V++G +P+  +Y +L++G+ K GK  +  +I +EM +    PN+
Sbjct: 265 VSLGDLLGAKRMFDEIVDRGWLPDATTYTILMHGYVKQGKFIDAAKIMDEMDDNGIGPNE 324

Query: 368 FTYSILVESLYGSGMEEEASKLL 436
            TY I++E+        EA  LL
Sbjct: 325 VTYGIMIEAFCKEKKSGEAVNLL 347



 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 3/130 (2%)
 Frame = +2

Query: 53  NAISSTLIY--WVSKKGKIWEARKLFDEF-EKGSIPSVLTYNTLISGMCERGELQEAGRL 223
           N +S T I   +VS  G +  A+++FDE  ++G +P   TY  L+ G  ++G+  +A ++
Sbjct: 253 NVVSYTTILGCYVSL-GDLLGAKRMFDEIVDRGWLPDATTYTILMHGYVKQGKFIDAAKI 311

Query: 224 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 403
            D+M + G  PN  +Y ++I  FCK  K+ E V +  +ML+K  +P+    S +++ L  
Sbjct: 312 MDEMDDNGIGPNEVTYGIMIEAFCKEKKSGEAVNLLNDMLDKRYIPSPTLCSKVIDVLCE 371

Query: 404 SGMEEEASKL 433
            G  EEA  L
Sbjct: 372 EGKVEEACDL 381



 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
 Frame = +2

Query: 14  VWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSI-PSVLTYNTLISGMC 190
           ++ +++ +   PD    + L++   K+GK  +A K+ DE +   I P+ +TY  +I   C
Sbjct: 276 MFDEIVDRGWLPDATTYTILMHGYVKQGKFIDAAKIMDEMDDNGIGPNEVTYGIMIEAFC 335

Query: 191 ERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKF 370
           +  +  EA  L +DM++K  +P+    + +I+  C+ GK  E   +++++L K C P+  
Sbjct: 336 KEKKSGEAVNLLNDMLDKRYIPSPTLCSKVIDVLCEEGKVEEACDLWKKLLVKNCTPDNT 395

Query: 371 TYSILVESLYGSGMEEEASKL 433
             S LV  L   G   EA KL
Sbjct: 396 ISSTLVHWLCKKGQIREARKL 416



 Score = 63.9 bits (154), Expect = 9e-08
 Identities = 30/103 (29%), Positives = 58/103 (56%)
 Frame = +2

Query: 149 PSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRI 328
           PSV T N L++ +C++ ++  A ++ D+M   G VPNV SY  ++  +   G      R+
Sbjct: 217 PSVFTCNILLNALCKKDDINSATKVLDEMPVMGIVPNVVSYTTILGCYVSLGDLLGAKRM 276

Query: 329 FEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSG 457
           F+E++++  +P+  TY+IL+      G   +A+K++     +G
Sbjct: 277 FDEIVDRGWLPDATTYTILMHGYVKQGKFIDAAKIMDEMDDNG 319


>ref|XP_004308728.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like, partial [Fragaria vesca subsp.
           vesca]
          Length = 506

 Score =  236 bits (602), Expect = 1e-59
 Identities = 111/184 (60%), Positives = 139/184 (75%)
 Frame = +2

Query: 5   ACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLISG 184
           AC++W++LL+KNC PDNA+  TLIYW+ KKGK+WEARKLFD+FE    P V+TYN LISG
Sbjct: 322 ACELWRRLLKKNCMPDNAVLGTLIYWLCKKGKVWEARKLFDQFETSEPPDVMTYNVLISG 381

Query: 185 MCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPN 364
           MCE GEL EAGRLWDDMVEKG  PN F+YN+LI GFCK  KA+EG+RI +EMLEK C+PN
Sbjct: 382 MCEAGELCEAGRLWDDMVEKGYTPNSFTYNVLIKGFCKIKKATEGIRILDEMLEKGCLPN 441

Query: 365 KFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGESDSWRPVFDG 544
           K TY++L+E L  SG E E ++L+ +A SSG +  D+D W +F  KV  + DS   V + 
Sbjct: 442 KSTYAMLMEGLCDSGEEAEINRLISMAMSSGHV--DSDSWDLFLTKVVCDLDSGESVLNR 499

Query: 545 ILSE 556
           IL E
Sbjct: 500 ILQE 503



 Score = 71.6 bits (174), Expect = 4e-10
 Identities = 39/150 (26%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
 Frame = +2

Query: 5   ACDVWKKLLRKN-----CTPDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTY 166
           +CD+   + R +      +P+ +  + LI  + K+  +  AR++ DE    G +P+V+++
Sbjct: 142 SCDLVHSVFRSSKERFGVSPNVSSCNILIKALCKRNDLETARQVLDEMPAMGFVPNVVSF 201

Query: 167 NTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLE 346
            T++ G   R ++  A R++ +++++G  P+  +Y +L++G+ K GK  E V++ +EM +
Sbjct: 202 TTILGGYVSRRDMVGAKRVFGEILDRGWCPDATTYTVLMDGYVKEGKLVEAVKVMDEMED 261

Query: 347 KECVPNKFTYSILVESLYGSGMEEEASKLL 436
                N+ TY +++E         EA  LL
Sbjct: 262 NGVGANEVTYGVMIEGYCKGRKGGEAVNLL 291



 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
 Frame = +2

Query: 53  NAISSTLIY--WVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLISGMCERGELQEAGRLW 226
           N +S T I   +VS++  +   R   +  ++G  P   TY  L+ G  + G+L EA ++ 
Sbjct: 197 NVVSFTTILGGYVSRRDMVGAKRVFGEILDRGWCPDATTYTVLMDGYVKEGKLVEAVKVM 256

Query: 227 DDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYGS 406
           D+M + G   N  +Y ++I G+CK  K  E V +  +M++K  VP       +V+ L   
Sbjct: 257 DEMEDNGVGANEVTYGVMIEGYCKGRKGGEAVNLLNDMVDKRYVPCSALCCKVVDVLCCQ 316

Query: 407 GMEEEASKL 433
           G  E A +L
Sbjct: 317 GKVENACEL 325



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
 Frame = +2

Query: 14  VWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSI-PSVLTYNTLISGMC 190
           V+ ++L +   PD    + L+    K+GK+ EA K+ DE E   +  + +TY  +I G C
Sbjct: 220 VFGEILDRGWCPDATTYTVLMDGYVKEGKLVEAVKVMDEMEDNGVGANEVTYGVMIEGYC 279

Query: 191 ERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKF 370
           +  +  EA  L +DMV+K  VP       +++  C  GK      ++  +L+K C+P+  
Sbjct: 280 KGRKGGEAVNLLNDMVDKRYVPCSALCCKVVDVLCCQGKVENACELWRRLLKKNCMPDNA 339

Query: 371 TYSILVESLYGSGMEEEASKL 433
               L+  L   G   EA KL
Sbjct: 340 VLGTLIYWLCKKGKVWEARKL 360



 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 32/106 (30%), Positives = 57/106 (53%)
 Frame = +2

Query: 140 GSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEG 319
           G  P+V + N LI  +C+R +L+ A ++ D+M   G VPNV S+  ++ G+         
Sbjct: 158 GVSPNVSSCNILIKALCKRNDLETARQVLDEMPAMGFVPNVVSFTTILGGYVSRRDMVGA 217

Query: 320 VRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSG 457
            R+F E+L++   P+  TY++L++     G   EA K++     +G
Sbjct: 218 KRVFGEILDRGWCPDATTYTVLMDGYVKEGKLVEAVKVMDEMEDNG 263


>ref|XP_002317747.2| hypothetical protein POPTR_0012s01390g, partial [Populus
           trichocarpa] gi|550326138|gb|EEE95967.2| hypothetical
           protein POPTR_0012s01390g, partial [Populus trichocarpa]
          Length = 515

 Score =  236 bits (601), Expect = 1e-59
 Identities = 108/172 (62%), Positives = 134/172 (77%)
 Frame = +2

Query: 5   ACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLISG 184
           AC +WK++L KNC PDNAI STLI+W+ K+GK+WEARKLFDEFE+G+IPS++TYNTLI+G
Sbjct: 346 ACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEFEQGTIPSLMTYNTLIAG 405

Query: 185 MCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPN 364
           MCERGEL EAGRLWDDMVEK C PN F+YNMLI GF KAG   EGVRI EEML+  C+PN
Sbjct: 406 MCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPN 465

Query: 365 KFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGESD 520
           K TY++L+E L  SGME +  K++ +A +S  +  D D W +F  K+ G  D
Sbjct: 466 KSTYTLLIEGLQESGMEGDVDKVMSMAMASREV--DADSWDLFLHKIVGNLD 515



 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 42/141 (29%), Positives = 78/141 (55%), Gaps = 7/141 (4%)
 Frame = +2

Query: 35  KNCT------PDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCE 193
           KNC       P+    + LI  + KK  +  A K+FDE    G IP+++TY T++ G   
Sbjct: 175 KNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVS 234

Query: 194 RGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFT 373
           RG+L  A +++ ++ +KG +P+  +Y +L+ G+CK G+ S+ +++ + M      PN+ T
Sbjct: 235 RGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVT 294

Query: 374 YSILVESLYGSGMEEEASKLL 436
           Y +++++        EA  L+
Sbjct: 295 YGVMIDAYCKEKKSGEARNLI 315



 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 40/144 (27%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
 Frame = +2

Query: 5   ACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEF-EKGSIPSVLTYNTLIS 181
           A  V+ ++      P+    +T++     +G +  A K+F E  +KG +P   TY  L+ 
Sbjct: 206 ALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMV 265

Query: 182 GMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVP 361
           G C++G L +A ++ D+M   G  PN  +Y ++I+ +CK  K+ E   + ++ML+K+ +P
Sbjct: 266 GYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLP 325

Query: 362 NKFTYSILVESLYGSGMEEEASKL 433
           +      +++ L   G  E A  L
Sbjct: 326 SSTLCCKVIDVLCEDGKVENACHL 349



 Score = 71.6 bits (174), Expect = 4e-10
 Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
 Frame = +2

Query: 14  VWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSI-PSVLTYNTLISGMC 190
           V+ ++  K   PD    + L+    K+G++ +A K+ D  E   + P+ +TY  +I   C
Sbjct: 244 VFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYC 303

Query: 191 ERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKF 370
           +  +  EA  L DDM++K  +P+      +I+  C+ GK      +++ MLEK C+P+  
Sbjct: 304 KEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNA 363

Query: 371 TYSILVESLYGSGMEEEASKL 433
             S L+  L   G   EA KL
Sbjct: 364 IMSTLIHWLCKEGKVWEARKL 384


>ref|XP_006339749.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Solanum tuberosum]
          Length = 564

 Score =  235 bits (600), Expect = 2e-59
 Identities = 114/188 (60%), Positives = 137/188 (72%)
 Frame = +2

Query: 2   EACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLIS 181
           EACD+WKKLL KNCTPDN I STLI+W+ KKG+I EARKLFDEFEK S PSVLTYN LI+
Sbjct: 380 EACDLWKKLLVKNCTPDNTILSTLIHWLCKKGQIREARKLFDEFEKSSSPSVLTYNMLIA 439

Query: 182 GMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVP 361
           GMCE+G+L EAGRLWDDMV+KGCVPN F+YNMLI GFCK G A EG+R+ EEML+K C P
Sbjct: 440 GMCEKGKLHEAGRLWDDMVDKGCVPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLDKGCHP 499

Query: 362 NKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGESDSWRPVFD 541
           NK TYSIL++ L  S +  E  ++L LA S     +D++ W +   K      +   V D
Sbjct: 500 NKSTYSILIKGLLDSELNAEVLRVLALAASGD---VDSETWGVLVAKFVTNVQNVCSVLD 556

Query: 542 GILSETDV 565
             LSE +V
Sbjct: 557 KTLSENEV 564



 Score = 77.4 bits (189), Expect = 8e-12
 Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
 Frame = +2

Query: 44  TPDNAISSTLIYWVSKKGKIWEARKLFDEFE-KGSIPSVLTYNTLISGMCERGELQEAGR 220
           TP     + L+  + KK  I  A K+ DE    G IP+V++Y T++      G+L  A R
Sbjct: 219 TPSVFTCNILLNALCKKDDINSAIKVLDEMPVMGIIPNVVSYTTILGCYVSLGDLVGAKR 278

Query: 221 LWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLY 400
           ++D++V++G +P+  +Y +L++G+ K GK  +  +I +EM +    PN+ TY I++E+  
Sbjct: 279 MFDEIVDRGWLPDATTYTILMHGYAKQGKFIDAAKIMDEMEDNGIGPNEVTYGIMIEAFC 338

Query: 401 GSGMEEEASKLL 436
                 EA  LL
Sbjct: 339 KETKSGEAINLL 350



 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 3/130 (2%)
 Frame = +2

Query: 53  NAISSTLIY--WVSKKGKIWEARKLFDEF-EKGSIPSVLTYNTLISGMCERGELQEAGRL 223
           N +S T I   +VS  G +  A+++FDE  ++G +P   TY  L+ G  ++G+  +A ++
Sbjct: 256 NVVSYTTILGCYVSL-GDLVGAKRMFDEIVDRGWLPDATTYTILMHGYAKQGKFIDAAKI 314

Query: 224 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 403
            D+M + G  PN  +Y ++I  FCK  K+ E + +  +ML+K  +P+    S +++ L  
Sbjct: 315 MDEMEDNGIGPNEVTYGIMIEAFCKETKSGEAINLLNDMLDKRYIPSPTLCSKVIDVLCE 374

Query: 404 SGMEEEASKL 433
            G  EEA  L
Sbjct: 375 EGKVEEACDL 384



 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 29/103 (28%), Positives = 58/103 (56%)
 Frame = +2

Query: 149 PSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRI 328
           PSV T N L++ +C++ ++  A ++ D+M   G +PNV SY  ++  +   G      R+
Sbjct: 220 PSVFTCNILLNALCKKDDINSAIKVLDEMPVMGIIPNVVSYTTILGCYVSLGDLVGAKRM 279

Query: 329 FEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSG 457
           F+E++++  +P+  TY+IL+      G   +A+K++     +G
Sbjct: 280 FDEIVDRGWLPDATTYTILMHGYAKQGKFIDAAKIMDEMEDNG 322


>ref|XP_007220019.1| hypothetical protein PRUPE_ppa003879mg [Prunus persica]
           gi|462416481|gb|EMJ21218.1| hypothetical protein
           PRUPE_ppa003879mg [Prunus persica]
          Length = 542

 Score =  230 bits (587), Expect = 6e-58
 Identities = 107/185 (57%), Positives = 137/185 (74%)
 Frame = +2

Query: 2   EACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLIS 181
           + C++WK+LL+ NCTPDNAISSTLIYW+ K+GK+WEA+KLFD+ +   IP V+TYN LI+
Sbjct: 357 DGCELWKRLLKNNCTPDNAISSTLIYWLCKEGKVWEAKKLFDQLKTDLIPGVMTYNMLIA 416

Query: 182 GMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVP 361
           G+CE GEL EAGRLWDDMVEKGC PN F+YNMLI GFCK GKA EG+R+ EEML+K C+P
Sbjct: 417 GLCEVGELCEAGRLWDDMVEKGCAPNAFTYNMLIKGFCKIGKAEEGIRMLEEMLDKGCLP 476

Query: 362 NKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGESDSWRPVFD 541
            K TY +L+E L     E+E +K++ LA S+G I  ++  W I   K  G+ D+   V D
Sbjct: 477 TKSTYGMLIEGLCDLRKEDEVTKVISLAMSNGDI--ESASWDILLTKFVGDLDNGGAVMD 534

Query: 542 GILSE 556
            IL E
Sbjct: 535 KILVE 539



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 44/141 (31%), Positives = 79/141 (56%), Gaps = 7/141 (4%)
 Frame = +2

Query: 35  KNC------TPDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCE 193
           KNC       P+    + LI  + +K  +  A K+ DE    G +P V+TY T++ G   
Sbjct: 187 KNCGQRFGVRPNVFTCNILIKALCQKDDVETALKVLDEMPAMGFVPDVVTYTTVLGGYVS 246

Query: 194 RGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFT 373
           RG++  A R++ +++++G  P+  +Y +L++GF K GK  + V++ +EM E +  PN+ T
Sbjct: 247 RGDMVGAKRVFGEVLDRGWHPDATTYTILMDGFVKQGKLVDAVKVMDEMEENKVGPNEVT 306

Query: 374 YSILVESLYGSGMEEEASKLL 436
           Y +++E+   +    EA  LL
Sbjct: 307 YGVMIEAYCKAKKSGEAVNLL 327



 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
 Frame = +2

Query: 14  VWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSI-PSVLTYNTLISGMC 190
           V+ ++L +   PD    + L+    K+GK+ +A K+ DE E+  + P+ +TY  +I   C
Sbjct: 256 VFGEVLDRGWHPDATTYTILMDGFVKQGKLVDAVKVMDEMEENKVGPNEVTYGVMIEAYC 315

Query: 191 ERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKF 370
           +  +  EA  L +DM+EK  VP+      +I+  C  GKA +G  +++ +L+  C P+  
Sbjct: 316 KAKKSGEAVNLLNDMIEKRYVPSSALCCKVIDVLCHEGKAEDGCELWKRLLKNNCTPDNA 375

Query: 371 TYSILVESLYGSGMEEEASKL 433
             S L+  L   G   EA KL
Sbjct: 376 ISSTLIYWLCKEGKVWEAKKL 396



 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 38/130 (29%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
 Frame = +2

Query: 47  PDNAISSTLIYWVSKKGKIWEARKLFDE-FEKGSIPSVLTYNTLISGMCERGELQEAGRL 223
           PD    +T++     +G +  A+++F E  ++G  P   TY  L+ G  ++G+L +A ++
Sbjct: 232 PDVVTYTTVLGGYVSRGDMVGAKRVFGEVLDRGWHPDATTYTILMDGFVKQGKLVDAVKV 291

Query: 224 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 403
            D+M E    PN  +Y ++I  +CKA K+ E V +  +M+EK  VP+      +++ L  
Sbjct: 292 MDEMEENKVGPNEVTYGVMIEAYCKAKKSGEAVNLLNDMIEKRYVPSSALCCKVIDVLCH 351

Query: 404 SGMEEEASKL 433
            G  E+  +L
Sbjct: 352 EGKAEDGCEL 361


>ref|XP_006400179.1| hypothetical protein EUTSA_v10013226mg [Eutrema salsugineum]
           gi|557101269|gb|ESQ41632.1| hypothetical protein
           EUTSA_v10013226mg [Eutrema salsugineum]
          Length = 530

 Score =  229 bits (584), Expect = 1e-57
 Identities = 109/186 (58%), Positives = 136/186 (73%)
 Frame = +2

Query: 2   EACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLIS 181
           EAC +W+K+L+ NC PDNA+ STLI+W+ K G++ EARKLFDEFEKGSIPS+LTYNTLIS
Sbjct: 344 EACSLWRKMLKNNCMPDNALLSTLIHWLCKDGRVSEARKLFDEFEKGSIPSLLTYNTLIS 403

Query: 182 GMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVP 361
           GMCE+GEL EAGRLWDDMVE+ C PN F+YN+LI G  K G   EGVR+ EEMLEK C P
Sbjct: 404 GMCEKGELTEAGRLWDDMVERRCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEKGCFP 463

Query: 362 NKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGESDSWRPVFD 541
           NK T+ IL E L   G EE+A K++ +A  SG +  D + W +F +K  GE D    V +
Sbjct: 464 NKTTFLILFEGLQKLGKEEDAIKIVSMAVMSGKV--DKESWELFLKKFAGELDKGVVVLE 521

Query: 542 GILSET 559
            +L E+
Sbjct: 522 ELLRES 527



 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 44/141 (31%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
 Frame = +2

Query: 35  KNC------TPDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCE 193
           KNC      TP+    + L+  + KK  I  A K+ DE    G +P+++TY T++ G   
Sbjct: 174 KNCKESFGITPNIFTCNLLVKALCKKNDIESAFKVLDEIPAMGLVPNLVTYTTILGGYVA 233

Query: 194 RGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFT 373
           RG+++ A R+  +M+++G  P+  +Y +L++G+CK G+ SE   + ++M + E  PN+ T
Sbjct: 234 RGDMEAAKRVLREMMDRGWDPDATTYTVLMDGYCKLGRFSEAAMVMDDMEKNEIEPNEVT 293

Query: 374 YSILVESLYGSGMEEEASKLL 436
           Y +++ +L       EA  +L
Sbjct: 294 YGVMIGALCKEKKAGEARNML 314



 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
 Frame = +2

Query: 47  PDNAISSTLIYWVSKKGKIWEARKLFDEF-EKGSIPSVLTYNTLISGMCERGELQEAGRL 223
           P+    +T++     +G +  A+++  E  ++G  P   TY  L+ G C+ G   EA  +
Sbjct: 219 PNLVTYTTILGGYVARGDMEAAKRVLREMMDRGWDPDATTYTVLMDGYCKLGRFSEAAMV 278

Query: 224 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 403
            DDM +    PN  +Y ++I   CK  KA E   + +EM+++  VP+      ++++L  
Sbjct: 279 MDDMEKNEIEPNEVTYGVMIGALCKEKKAGEARNMLDEMIDRSFVPDSSLCCKVIDALCE 338

Query: 404 SGMEEEASKL 433
               +EA  L
Sbjct: 339 DHKVDEACSL 348


>ref|XP_006832985.1| hypothetical protein AMTR_s00221p00020810 [Amborella trichopoda]
           gi|548837495|gb|ERM98263.1| hypothetical protein
           AMTR_s00221p00020810 [Amborella trichopoda]
          Length = 549

 Score =  229 bits (583), Expect = 2e-57
 Identities = 110/176 (62%), Positives = 136/176 (77%)
 Frame = +2

Query: 2   EACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLIS 181
           EAC +WKKLL++NC PDNAI STLIYW+ K  KI EARKLFDEFEKG +PS+LTYNTLIS
Sbjct: 366 EACVLWKKLLKRNCIPDNAIYSTLIYWLCKGEKIKEARKLFDEFEKGFLPSILTYNTLIS 425

Query: 182 GMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVP 361
            MCE+GELQEAGRLWD+M+EKGCVPNVF+YN+LI GF   G+  EG+R+ EEMLEK C  
Sbjct: 426 AMCEKGELQEAGRLWDNMIEKGCVPNVFTYNILIKGFSIIGRGREGLRVLEEMLEKRCEA 485

Query: 362 NKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGESDSWR 529
           NK TY+IL++  +GS   ++  KLL +AT+S G  LD D W +F  KV  + + W+
Sbjct: 486 NKSTYAILMDGFHGS--TDDIMKLL-VATTSRGFLLDLDSWGLFVDKVICDREGWK 538



 Score = 95.1 bits (235), Expect = 4e-17
 Identities = 48/143 (33%), Positives = 84/143 (58%), Gaps = 6/143 (4%)
 Frame = +2

Query: 26  LLRKNCT-----PDNAISSTLIYWVSKKGKIWEARKLFDEF-EKGSIPSVLTYNTLISGM 187
           +L KNC      P+    + LI  + +   +  A ++ +E   +G +P+ +TY T++SG 
Sbjct: 194 ILYKNCQKFGIFPNIFTCNILIKALCQMNNLESAFRVLEEMPSQGFVPNPVTYTTILSGF 253

Query: 188 CERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNK 367
           C RG+L  A R++D+++ KG VP+  +Y ++I+GFCK G+  + V++ ++M E   +PN 
Sbjct: 254 CARGDLIRAKRIFDEIITKGWVPDPITYTVMIDGFCKKGRLMDAVKLMDDMEENGVLPND 313

Query: 368 FTYSILVESLYGSGMEEEASKLL 436
            TY +++ES    G   EA  LL
Sbjct: 314 VTYGVVIESYCKEGRSGEALSLL 336



 Score = 87.8 bits (216), Expect = 6e-15
 Identities = 44/141 (31%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
 Frame = +2

Query: 14  VWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEF-EKGSIPSVLTYNTLISGMC 190
           V +++  +   P+    +T++     +G +  A+++FDE   KG +P  +TY  +I G C
Sbjct: 230 VLEEMPSQGFVPNPVTYTTILSGFCARGDLIRAKRIFDEIITKGWVPDPITYTVMIDGFC 289

Query: 191 ERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKF 370
           ++G L +A +L DDM E G +PN  +Y ++I  +CK G++ E + +  EMLEK+ +P   
Sbjct: 290 KKGRLMDAVKLMDDMEENGVLPNDVTYGVVIESYCKEGRSGEALSLLNEMLEKKFIPCST 349

Query: 371 TYSILVESLYGSGMEEEASKL 433
               +V+ L      +EA  L
Sbjct: 350 LCCKIVDLLCQESKVDEACVL 370


>ref|XP_006287468.1| hypothetical protein CARUB_v10000680mg [Capsella rubella]
           gi|482556174|gb|EOA20366.1| hypothetical protein
           CARUB_v10000680mg [Capsella rubella]
          Length = 533

 Score =  222 bits (566), Expect = 2e-55
 Identities = 106/188 (56%), Positives = 134/188 (71%)
 Frame = +2

Query: 2   EACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLIS 181
           EAC +W+K+L+ NC PDNA+ STLI+W+ K+G++ EARKLFDEFEKGSIPS+LT+NTLIS
Sbjct: 347 EACALWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFEKGSIPSLLTFNTLIS 406

Query: 182 GMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVP 361
           GMCE+GEL EAGRLWDDMVE+ C PN F+YN+LI G  K G   EGVR+ EEMLE  C P
Sbjct: 407 GMCEKGELTEAGRLWDDMVERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLENGCFP 466

Query: 362 NKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGESDSWRPVFD 541
           NK T+ IL E +   G EE+A K++ +A   G +  D + W +F +K  GE D    V  
Sbjct: 467 NKTTFLILFEGIQELGKEEDAIKVVSMAVMRGKV--DKESWELFLKKFAGELDKGVLVLK 524

Query: 542 GILSETDV 565
            +L E  V
Sbjct: 525 ELLHEVSV 532



 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 41/131 (31%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
 Frame = +2

Query: 44  TPDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCERGELQEAGR 220
           TP+    + L+  + KK  I  A K+ DE    G +P+++TY T++ G   RG+++ A R
Sbjct: 186 TPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMEAAKR 245

Query: 221 LWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLY 400
           +  +M+++G  P+  +Y +L++G+CK G+ SE   + +EM + E  PN+ TY +++  L 
Sbjct: 246 VLGEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDEMEKNEVEPNEVTYGVMIRGLC 305

Query: 401 GSGMEEEASKL 433
                 EA  +
Sbjct: 306 KEKKSGEARNM 316



 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
 Frame = +2

Query: 23  KLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSI-PSVLTYNTLISGMCERG 199
           ++L +   PD    + L+    K G+  EA  + DE EK  + P+ +TY  +I G+C+  
Sbjct: 249 EMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDEMEKNEVEPNEVTYGVMIRGLCKEK 308

Query: 200 ELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYS 379
           +  EA  ++D+M++K  +P+      +I+  C+  K  E   ++ +ML+  C+P+    S
Sbjct: 309 KSGEARNMFDEMLDKSFMPDSSLCCKVIDALCEDHKVDEACALWRKMLKNNCMPDNALLS 368

Query: 380 ILVESLYGSGMEEEASKL 433
            L+  L   G   EA KL
Sbjct: 369 TLIHWLCKEGRVSEARKL 386



 Score = 67.8 bits (164), Expect = 6e-09
 Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
 Frame = +2

Query: 47  PDNAISSTLIYWVSKKGKIWEARKLFDEF-EKGSIPSVLTYNTLISGMCERGELQEAGRL 223
           P+    +T++     +G +  A+++  E  ++G  P   TY  L+ G C+ G   EA  +
Sbjct: 222 PNLVTYTTILGGYVARGDMEAAKRVLGEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATV 281

Query: 224 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 403
            D+M +    PN  +Y ++I G CK  K+ E   +F+EML+K  +P+      ++++L  
Sbjct: 282 MDEMEKNEVEPNEVTYGVMIRGLCKEKKSGEARNMFDEMLDKSFMPDSSLCCKVIDALCE 341

Query: 404 SGMEEEASKL 433
               +EA  L
Sbjct: 342 DHKVDEACAL 351



 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 26/99 (26%), Positives = 55/99 (55%)
 Frame = +2

Query: 140 GSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEG 319
           G  P++ T N L+  +C++ +++ A ++ D++   G VPN+ +Y  ++ G+   G     
Sbjct: 184 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMEAA 243

Query: 320 VRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLL 436
            R+  EML++   P+  TY++L++     G   EA+ ++
Sbjct: 244 KRVLGEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVM 282


>ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
           gi|449492939|ref|XP_004159147.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
          Length = 535

 Score =  221 bits (562), Expect = 4e-55
 Identities = 107/186 (57%), Positives = 134/186 (72%)
 Frame = +2

Query: 2   EACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLIS 181
           EAC +W+KLL+KNCTPDNAI+STLI+W+ K+G IWEARKLF+EFE+G+I S+LTYNTLI+
Sbjct: 350 EACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEFERGTISSLLTYNTLIA 409

Query: 182 GMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVP 361
           GMCE GEL EA RLWDDM+EKGCVPN F+YNMLI GF K GKA E +++ EEML+K C+ 
Sbjct: 410 GMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLL 469

Query: 362 NKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGESDSWRPVFD 541
           N+ TY ILVE L   G  EE   +L +  SSG +  D   W +F        +    + +
Sbjct: 470 NESTYLILVEGLLKLGKREELLNILSMIISSGAV--DFKAWNLFVPHFVSNVNEQANILE 527

Query: 542 GILSET 559
            IL ET
Sbjct: 528 KILIET 533



 Score = 80.9 bits (198), Expect = 7e-13
 Identities = 41/141 (29%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
 Frame = +2

Query: 14  VWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDE-FEKGSIPSVLTYNTLISGMC 190
           V+ ++      P+    +T++     +G +  A+++F E F+ G +P   TY  L+ G  
Sbjct: 214 VFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYV 273

Query: 191 ERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKF 370
           ++G   +A ++ D+M E G  PN  +Y ++I G+CK  K+ E + +  +MLEK+ +PN  
Sbjct: 274 KQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSA 333

Query: 371 TYSILVESLYGSGMEEEASKL 433
               +++ L G G  +EA K+
Sbjct: 334 LCCKVIDVLCGEGRVKEACKM 354



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
 Frame = +2

Query: 47  PDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCERGELQEAGRL 223
           P+    + LI  + KK  +  ARK+FDE    G +P+V+TY T++ G   RG++  A R+
Sbjct: 190 PNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRV 249

Query: 224 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 403
           + ++ + G +P+  +Y +L++G+ K G+ ++ V++ +EM E    PN  TY +++     
Sbjct: 250 FGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCK 309

Query: 404 SGMEEEASKLL 436
                EA  LL
Sbjct: 310 ERKSGEALNLL 320



 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
 Frame = +2

Query: 14  VWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSI-PSVLTYNTLISGMC 190
           V+ +L      PD    + L+    K+G+  +A K+ DE E+  + P+ +TY  +I G C
Sbjct: 249 VFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYC 308

Query: 191 ERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKF 370
           +  +  EA  L +DM+EK  +PN      +I+  C  G+  E  +++E++L+K C P+  
Sbjct: 309 KERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNA 368

Query: 371 TYSILVESLYGSGMEEEASKL 433
             S L+  L   G   EA KL
Sbjct: 369 ITSTLIHWLCKEGNIWEARKL 389



 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 31/106 (29%), Positives = 59/106 (55%)
 Frame = +2

Query: 140 GSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEG 319
           G +P+V T N LI  +C++ +++ A +++D+M   G VPNV +Y  ++ G+   G     
Sbjct: 187 GVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGA 246

Query: 320 VRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSG 457
            R+F E+ +   +P+  TY+IL++     G   +A K++     +G
Sbjct: 247 KRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENG 292


>ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial; Flags: Precursor
           gi|9759124|dbj|BAB09609.1| salt-inducible protein-like
           [Arabidopsis thaliana] gi|332004907|gb|AED92290.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 535

 Score =  220 bits (560), Expect = 8e-55
 Identities = 102/173 (58%), Positives = 129/173 (74%)
 Frame = +2

Query: 2   EACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLIS 181
           EAC +W+K+L+ NC PDNA+ STLI+W+ K+G++ EARKLFDEFEKGSIPS+LTYNTLI+
Sbjct: 349 EACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIA 408

Query: 182 GMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVP 361
           GMCE+GEL EAGRLWDDM E+ C PN F+YN+LI G  K G   EGVR+ EEMLE  C P
Sbjct: 409 GMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFP 468

Query: 362 NKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGESD 520
           NK T+ IL E L   G EE+A K++ +A  +G +  D + W +F +K  GE D
Sbjct: 469 NKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKV--DKESWELFLKKFAGELD 519



 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 40/131 (30%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
 Frame = +2

Query: 44  TPDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCERGELQEAGR 220
           TP+    + L+  + KK  I  A K+ DE    G +P+++TY T++ G   RG+++ A R
Sbjct: 188 TPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKR 247

Query: 221 LWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLY 400
           + ++M+++G  P+  +Y +L++G+CK G+ SE   + ++M + E  PN+ TY +++ +L 
Sbjct: 248 VLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 307

Query: 401 GSGMEEEASKL 433
                 EA  +
Sbjct: 308 KEKKSGEARNM 318



 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
 Frame = +2

Query: 14  VWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSI-PSVLTYNTLISGMC 190
           V +++L +   PD    + L+    K G+  EA  + D+ EK  I P+ +TY  +I  +C
Sbjct: 248 VLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 307

Query: 191 ERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKF 370
           +  +  EA  ++D+M+E+  +P+      +I+  C+  K  E   ++ +ML+  C+P+  
Sbjct: 308 KEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNA 367

Query: 371 TYSILVESLYGSGMEEEASKL 433
             S L+  L   G   EA KL
Sbjct: 368 LLSTLIHWLCKEGRVTEARKL 388



 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
 Frame = +2

Query: 47  PDNAISSTLIYWVSKKGKIWEARKLFDEF-EKGSIPSVLTYNTLISGMCERGELQEAGRL 223
           P+    +T++     +G +  A+++ +E  ++G  P   TY  L+ G C+ G   EA  +
Sbjct: 224 PNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATV 283

Query: 224 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 403
            DDM +    PN  +Y ++I   CK  K+ E   +F+EMLE+  +P+      ++++L  
Sbjct: 284 MDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCE 343

Query: 404 SGMEEEASKL 433
               +EA  L
Sbjct: 344 DHKVDEACGL 353



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 27/99 (27%), Positives = 56/99 (56%)
 Frame = +2

Query: 140 GSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEG 319
           G  P++ T N L+  +C++ +++ A ++ D++   G VPN+ +Y  ++ G+   G     
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245

Query: 320 VRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLL 436
            R+ EEML++   P+  TY++L++     G   EA+ ++
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVM 284


>ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317554|gb|EFH47976.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 533

 Score =  219 bits (558), Expect = 1e-54
 Identities = 104/188 (55%), Positives = 132/188 (70%)
 Frame = +2

Query: 2   EACDVWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLIS 181
           EAC +W+K+L+ NC PDNA+ STLI+W+ K+G++ EARKLFDEF+KGSIPS+LTYNTLI+
Sbjct: 347 EACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFDKGSIPSLLTYNTLIA 406

Query: 182 GMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVP 361
           GMCE+GEL EAGRLWDDM E+ C PN F+YN+LI G  K G   EGVR+ EEMLE  C P
Sbjct: 407 GMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFP 466

Query: 362 NKFTYSILVESLYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGESDSWRPVFD 541
           NK T+ IL E L   G EE+A K++ +A  +G +  D + W +F  K  GE D       
Sbjct: 467 NKTTFLILFEGLQKLGKEEDAIKIVSMAVMNGKV--DKESWELFLNKFVGELDKGVLALK 524

Query: 542 GILSETDV 565
            +L E  V
Sbjct: 525 ELLHEISV 532



 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 40/131 (30%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
 Frame = +2

Query: 44  TPDNAISSTLIYWVSKKGKIWEARKLFDEFEK-GSIPSVLTYNTLISGMCERGELQEAGR 220
           TP+    + L+  + KK  I  A K+ DE    G +P+++TY T++ G   RG+++ A R
Sbjct: 186 TPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKR 245

Query: 221 LWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLY 400
           + ++M+++G  P+  +Y +L++G+CK G+ SE   + ++M + E  PN+ TY +++ +L 
Sbjct: 246 VLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 305

Query: 401 GSGMEEEASKL 433
                 EA  +
Sbjct: 306 KEKKSGEARNM 316



 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 39/141 (27%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
 Frame = +2

Query: 14  VWKKLLRKNCTPDNAISSTLIYWVSKKGKIWEARKLFDEFEKGSI-PSVLTYNTLISGMC 190
           V +++L +   PD    + L+    K G+  EA  + D+ EK  I P+ +TY  +I  +C
Sbjct: 246 VLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 305

Query: 191 ERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKF 370
           +  +  EA  ++D+M+++  +P+      +I+  C+  K  E   ++ +ML+  C+P+  
Sbjct: 306 KEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNA 365

Query: 371 TYSILVESLYGSGMEEEASKL 433
             S L+  L   G   EA KL
Sbjct: 366 LLSTLIHWLCKEGRVSEARKL 386



 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
 Frame = +2

Query: 47  PDNAISSTLIYWVSKKGKIWEARKLFDEF-EKGSIPSVLTYNTLISGMCERGELQEAGRL 223
           P+    +T++     +G +  A+++ +E  ++G  P  +TY  L+ G C+ G   EA  +
Sbjct: 222 PNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATV 281

Query: 224 WDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYG 403
            DDM +    PN  +Y ++I   CK  K+ E   +F+EML++  +P+      ++++L  
Sbjct: 282 MDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCE 341

Query: 404 SGMEEEASKL 433
               +EA  L
Sbjct: 342 DHKVDEACGL 351



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 27/99 (27%), Positives = 56/99 (56%)
 Frame = +2

Query: 140 GSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEG 319
           G  P++ T N L+  +C++ +++ A ++ D++   G VPN+ +Y  ++ G+   G     
Sbjct: 184 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESA 243

Query: 320 VRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLL 436
            R+ EEML++   P+  TY++L++     G   EA+ ++
Sbjct: 244 KRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVM 282


>ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498082|gb|AES79285.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  209 bits (533), Expect = 1e-51
 Identities = 103/187 (55%), Positives = 134/187 (71%), Gaps = 2/187 (1%)
 Frame = +2

Query: 2   EACDVWKKLLRKNCTPDNAIS-STLIYWVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLI 178
           +AC++W+ + RKNC  + A+  STLI+W+ KKGK+ EAR +FDEF KGS+ S+LTYNTLI
Sbjct: 349 KACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVFDEFGKGSVASLLTYNTLI 408

Query: 179 SGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECV 358
           +G+CE GEL EA RLWDDMVEKG  PN F+YNMLI GFCK G A EG+R+ EEMLE  C+
Sbjct: 409 AGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRCL 468

Query: 359 PNKFTYSILVES-LYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGESDSWRPV 535
           PNK TY+IL++  L   GM++E +K++ LA S+G   +D D W IF + V G  +     
Sbjct: 469 PNKSTYTILIDGILLLGGMKQEINKVVSLAMSTG---VDADLWNIFVKPVVGNDNGGEAE 525

Query: 536 FDGILSE 556
            D IL E
Sbjct: 526 LDRILLE 532



 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 40/144 (27%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
 Frame = +2

Query: 26  LLRKNC------TPDNAISSTLIYWVSKKGKIWEARKLFDEFE-KGSIPSVLTYNTLISG 184
           L+ KNC       P+    + L+  + K  ++  A K+ DE    G +P+V++Y T++ G
Sbjct: 176 LVFKNCGERFRVLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGG 235

Query: 185 MCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPN 364
              RG++  A +++ +++++G  P+V SY +L++GFC+ GK  + +R+ + M +    PN
Sbjct: 236 FVWRGDMDGAMKVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPN 295

Query: 365 KFTYSILVESLYGSGMEEEASKLL 436
           + TY +++++        EA  L+
Sbjct: 296 EVTYGVMIQAYCKEKKSGEAVNLI 319



 Score = 67.8 bits (164), Expect = 6e-09
 Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
 Frame = +2

Query: 92  KGKIWEARKLFDE-FEKGSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFS 268
           +G +  A K+F E  ++G  P V +Y  L+ G C  G+L +A R+ D M + G  PN  +
Sbjct: 239 RGDMDGAMKVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVT 298

Query: 269 YNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKL 433
           Y ++I  +CK  K+ E V + E+M+ K+ V        +V+ L   G  E+A ++
Sbjct: 299 YGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEM 353



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 29/104 (27%), Positives = 60/104 (57%)
 Frame = +2

Query: 146 IPSVLTYNTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVR 325
           +P+V++ N L+  +C+  E++ A ++ D+M   G VPNV SY  ++ GF   G     ++
Sbjct: 188 LPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMK 247

Query: 326 IFEEMLEKECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSG 457
           +F E+L++   P+  +Y++LV+     G   +A +++ +   +G
Sbjct: 248 VFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNG 291


>ref|XP_003613759.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355515094|gb|AES96717.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 733

 Score =  203 bits (516), Expect = 1e-49
 Identities = 100/187 (53%), Positives = 130/187 (69%), Gaps = 2/187 (1%)
 Frame = +2

Query: 2   EACDVWKKLLRKNCTPDNAIS-STLIYWVSKKGKIWEARKLFDEFEKGSIPSVLTYNTLI 178
           +AC+VW+ + RKNC  + A+  STL +W+ KKGK+ EAR +FDEF KG + S+LTYNTLI
Sbjct: 213 KACEVWRMVSRKNCGLNGAVVVSTLTHWLCKKGKVLEARNMFDEFGKGLVASLLTYNTLI 272

Query: 179 SGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECV 358
           +G+CE G+L EA RLWD+MVEKG  PN F+YNMLI GFCK   A EG+R+ EEMLE  C 
Sbjct: 273 AGLCEGGKLCEAARLWDEMVEKGVAPNAFTYNMLIKGFCKVRNAKEGIRVLEEMLENRCF 332

Query: 359 PNKFTYSILVES-LYGSGMEEEASKLLGLATSSGGIFLDNDCWAIFARKVTGESDSWRPV 535
           PNK TY+IL++  L   GM++E +K++ LA S+G   +D D W IF + V G  D     
Sbjct: 333 PNKSTYTILIDGILLSGGMKQEINKVVSLAMSTG---VDADLWNIFVKPVVGNDDGGAAE 389

Query: 536 FDGILSE 556
            D IL E
Sbjct: 390 LDRILLE 396



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 40/153 (26%), Positives = 82/153 (53%), Gaps = 6/153 (3%)
 Frame = +2

Query: 71  LIYWVSKKGKIWEARKLFDEFE-KGSIPSVLTYNTLISGMCERGELQEAGRLWDDMVEKG 247
           L+  + K  ++  A K+ DE    G +P+V++Y T++ G   RG++  A +++ +++++G
Sbjct: 75  LLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRG 134

Query: 248 CVPNVFSYNMLINGFCKAGKASEGVRIFEEMLEKECVPNKFTYSI--LVESLYGSGM--- 412
             P+V SY +L++GFC+ GK  + +R+ + M E    PN+ +     L+E +    +   
Sbjct: 135 WSPDVTSYTVLVDGFCRLGKLVDAIRVMDVMEENGVEPNEKSGEAVNLIEDMIAKDLVVG 194

Query: 413 EEEASKLLGLATSSGGIFLDNDCWAIFARKVTG 511
            E   K++ +    G +    + W + +RK  G
Sbjct: 195 SELCCKVVDVLCEEGNVEKACEVWRMVSRKNCG 227



 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 27/97 (27%), Positives = 54/97 (55%)
 Frame = +2

Query: 167 NTLISGMCERGELQEAGRLWDDMVEKGCVPNVFSYNMLINGFCKAGKASEGVRIFEEMLE 346
           N L+  +C+  E++ A ++ D+M   G VPNV SY  ++ GF   G     +++F E+L+
Sbjct: 73  NILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLD 132

Query: 347 KECVPNKFTYSILVESLYGSGMEEEASKLLGLATSSG 457
           +   P+  +Y++LV+     G   +A +++ +   +G
Sbjct: 133 RGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDVMEENG 169