BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00053735
         (350 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008993682.1| RNA polymerase beta' subunit (chloroplast) [...    58   1e-06
ref|YP_008993854.1| RNA polymerase beta' subunit (chloroplast) [...    58   1e-06
ref|YP_008993510.1| RNA polymerase beta' subunit (chloroplast) [...    58   1e-06
ref|YP_008993424.1| RNA polymerase beta' subunit (chloroplast) [...    58   1e-06
gb|AEX98324.1| RNA polymerase beta subunit-2 (chloroplast) [Magn...    58   1e-06
gb|AEX98241.1| RNA polymerase beta' subunit (chloroplast) [Magno...    58   1e-06
ref|YP_006576105.1| RpoC2 (chloroplast) [Magnolia denudata] gi|3...    58   1e-06
gb|ABD93728.1| RNA polymerase beta chain [Akebia quinata]              57   2e-06
gb|ABD93729.1| RNA polymerase beta chain [Euptelea polyandra]          57   2e-06
gb|ABD93771.1| RNA polymerase beta chain [Lardizabala biternata]       57   3e-06
ref|YP_009026871.1| RNA polymerase beta'' subunit [Magnolia trip...    57   3e-06
ref|YP_008993768.1| RNA polymerase beta' subunit (chloroplast) [...    57   3e-06
ref|YP_008993338.1| RNA polymerase beta' subunit (chloroplast) [...    57   3e-06
ref|YP_008993252.1| RNA polymerase beta' subunit (chloroplast) [...    57   3e-06
ref|YP_007474526.1| RNA polymerase beta subunit-2 (chloroplast) ...    57   3e-06
ref|YP_007474442.1| RNA polymerase beta subunit-2 (chloroplast) ...    57   3e-06
ref|YP_007474360.1| RNA polymerase beta subunit-2 (chloroplast) ...    57   3e-06
ref|YP_004769704.1| RNA polymerase beta' subunit [Magnolia kwang...    57   3e-06
gb|ABD93748.1| RNA polymerase beta chain [Magnolia tripetala]          57   3e-06
ref|YP_008993596.1| RNA polymerase beta' subunit (chloroplast) [...    56   6e-06

>ref|YP_008993682.1| RNA polymerase beta' subunit (chloroplast) [Magnolia salicifolia]
          Length = 1380

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = -3

Query: 261 GLNDLV*DFIRMDLVKSLISYIGKRNDSARSGLGPD 154
           G NDL+ DFIRMDLVKS ISYIGKRND+A SGL PD
Sbjct: 861 GANDLIRDFIRMDLVKSPISYIGKRNDTAGSGLIPD 896


>ref|YP_008993854.1| RNA polymerase beta' subunit (chloroplast) [Magnolia sprengeri]
          Length = 1382

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = -3

Query: 261 GLNDLV*DFIRMDLVKSLISYIGKRNDSARSGLGPD 154
           G NDL+ DFIRMDLVKS ISYIGKRND+A SGL PD
Sbjct: 861 GANDLIRDFIRMDLVKSPISYIGKRNDTAGSGLIPD 896


>ref|YP_008993510.1| RNA polymerase beta' subunit (chloroplast) [Magnolia liliifera]
          Length = 1382

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = -3

Query: 261 GLNDLV*DFIRMDLVKSLISYIGKRNDSARSGLGPD 154
           G NDL+ DFIRMDLVKS ISYIGKRND+A SGL PD
Sbjct: 861 GANDLIRDFIRMDLVKSPISYIGKRNDTAGSGLIPD 896


>ref|YP_008993424.1| RNA polymerase beta' subunit (chloroplast) [Magnolia kobus]
          Length = 1382

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = -3

Query: 261 GLNDLV*DFIRMDLVKSLISYIGKRNDSARSGLGPD 154
           G NDL+ DFIRMDLVKS ISYIGKRND+A SGL PD
Sbjct: 861 GANDLIRDFIRMDLVKSPISYIGKRNDTAGSGLIPD 896


>gb|AEX98324.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia denudata]
          Length = 1382

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = -3

Query: 261 GLNDLV*DFIRMDLVKSLISYIGKRNDSARSGLGPD 154
           G NDL+ DFIRMDLVKS ISYIGKRND+A SGL PD
Sbjct: 861 GANDLIRDFIRMDLVKSPISYIGKRNDTAGSGLIPD 896


>gb|AEX98241.1| RNA polymerase beta' subunit (chloroplast) [Magnolia liliiflora]
          Length = 1382

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = -3

Query: 261 GLNDLV*DFIRMDLVKSLISYIGKRNDSARSGLGPD 154
           G NDL+ DFIRMDLVKS ISYIGKRND+A SGL PD
Sbjct: 861 GANDLIRDFIRMDLVKSPISYIGKRNDTAGSGLIPD 896


>ref|YP_006576105.1| RpoC2 (chloroplast) [Magnolia denudata] gi|343887529|gb|AEM65208.1|
           RpoC2 [Magnolia denudata]
          Length = 1382

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/36 (80%), Positives = 31/36 (86%)
 Frame = -3

Query: 261 GLNDLV*DFIRMDLVKSLISYIGKRNDSARSGLGPD 154
           G NDL+ DFIRMDLVKS ISYIGKRND+A SGL PD
Sbjct: 861 GANDLIRDFIRMDLVKSPISYIGKRNDTAGSGLIPD 896


>gb|ABD93728.1| RNA polymerase beta chain [Akebia quinata]
          Length = 861

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/34 (85%), Positives = 30/34 (88%)
 Frame = -3

Query: 258 LNDLV*DFIRMDLVKSLISYIGKRNDSARSGLGP 157
           LNDL+ DFIRMDLVKSLISY GKRNDSA SGL P
Sbjct: 415 LNDLIRDFIRMDLVKSLISYTGKRNDSAGSGLIP 448


>gb|ABD93729.1| RNA polymerase beta chain [Euptelea polyandra]
          Length = 796

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/102 (40%), Positives = 45/102 (44%), Gaps = 33/102 (32%)
 Frame = -3

Query: 258 LNDLV*DFIRMDLVKSLISYIGKRNDSARSGLGPD------------------------- 154
           +NDL+ DFIRMDLVKS ISY GKRND A SGL PD                         
Sbjct: 415 VNDLIRDFIRMDLVKSPISYTGKRNDPAGSGLSPDNGSDRNRTNTNLNSFYSKARIQQYL 474

Query: 153 --------TCS*IEMRGVYXXXXXXSNCPCLGSFKALKYNNV 52
                   T   I            SNC  +G FK+LKYNNV
Sbjct: 475 THHQGTIRTLLNINTECQSLIILSSSNCSRMGPFKSLKYNNV 516


>gb|ABD93771.1| RNA polymerase beta chain [Lardizabala biternata]
          Length = 861

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/34 (85%), Positives = 30/34 (88%)
 Frame = -3

Query: 258 LNDLV*DFIRMDLVKSLISYIGKRNDSARSGLGP 157
           LNDL+ DFIRMDLVKSLISY GKRNDSA SGL P
Sbjct: 415 LNDLIRDFIRMDLVKSLISYTGKRNDSAWSGLIP 448


>ref|YP_009026871.1| RNA polymerase beta'' subunit [Magnolia tripetala]
           gi|608608394|gb|AHW51948.1| RNA polymerase beta''
           subunit [Magnolia tripetala]
          Length = 1382

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -3

Query: 261 GLNDLV*DFIRMDLVKSLISYIGKRNDSARSGLGPD 154
           G NDL+ DFIR+DLVKS ISYIGKRND+A SGL PD
Sbjct: 861 GTNDLIRDFIRIDLVKSPISYIGKRNDTAGSGLIPD 896


>ref|YP_008993768.1| RNA polymerase beta' subunit (chloroplast) [Magnolia sinica]
          Length = 1382

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -3

Query: 261 GLNDLV*DFIRMDLVKSLISYIGKRNDSARSGLGPD 154
           G NDL+ DFIR+DLVKS ISYIGKRND+A SGL PD
Sbjct: 861 GANDLIRDFIRIDLVKSPISYIGKRNDTAGSGLIPD 896


>ref|YP_008993338.1| RNA polymerase beta' subunit (chloroplast) [Magnolia pyramidata]
          Length = 1382

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -3

Query: 261 GLNDLV*DFIRMDLVKSLISYIGKRNDSARSGLGPD 154
           G NDL+ DFIR+DLVKS ISYIGKRND+A SGL PD
Sbjct: 861 GANDLIRDFIRIDLVKSPISYIGKRNDTAGSGLIPD 896


>ref|YP_008993252.1| RNA polymerase beta' subunit (chloroplast) [Magnolia dealbata]
          Length = 1382

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -3

Query: 261 GLNDLV*DFIRMDLVKSLISYIGKRNDSARSGLGPD 154
           G NDL+ DFIR+DLVKS ISYIGKRND+A SGL PD
Sbjct: 861 GANDLIRDFIRIDLVKSPISYIGKRNDTAGSGLIPD 896


>ref|YP_007474526.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia grandiflora]
           gi|372862833|gb|AEX98909.1| RNA polymerase beta
           subunit-2 (chloroplast) [Magnolia grandiflora]
           gi|372863003|gb|AEX99077.1| RNA polymerase beta
           subunit-2 (chloroplast) [Magnolia grandiflora]
          Length = 1382

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -3

Query: 261 GLNDLV*DFIRMDLVKSLISYIGKRNDSARSGLGPD 154
           G NDL+ DFIR+DLVKS ISYIGKRND+A SGL PD
Sbjct: 861 GANDLIRDFIRIDLVKSPISYIGKRNDTAGSGLIPD 896


>ref|YP_007474442.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis
           subsp. biloba] gi|372862494|gb|AEX98574.1| RNA
           polymerase beta subunit-2 (chloroplast) [Magnolia
           officinalis subsp. biloba] gi|372862579|gb|AEX98658.1|
           RNA polymerase beta subunit-2 (chloroplast) [Magnolia
           officinalis subsp. biloba] gi|372862664|gb|AEX98742.1|
           RNA polymerase beta subunit-2 (chloroplast) [Magnolia
           officinalis subsp. biloba]
          Length = 1382

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -3

Query: 261 GLNDLV*DFIRMDLVKSLISYIGKRNDSARSGLGPD 154
           G NDL+ DFIR+DLVKS ISYIGKRND+A SGL PD
Sbjct: 861 GTNDLIRDFIRIDLVKSPISYIGKRNDTAGSGLIPD 896


>ref|YP_007474360.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis]
           gi|372862411|gb|AEX98492.1| RNA polymerase beta
           subunit-2 (chloroplast) [Magnolia officinalis]
          Length = 1382

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -3

Query: 261 GLNDLV*DFIRMDLVKSLISYIGKRNDSARSGLGPD 154
           G NDL+ DFIR+DLVKS ISYIGKRND+A SGL PD
Sbjct: 861 GTNDLIRDFIRIDLVKSPISYIGKRNDTAGSGLIPD 896


>ref|YP_004769704.1| RNA polymerase beta' subunit [Magnolia kwangsiensis]
           gi|302424170|gb|ADL39046.1| RNA polymerase beta' subunit
           [Magnolia kwangsiensis]
          Length = 1382

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -3

Query: 261 GLNDLV*DFIRMDLVKSLISYIGKRNDSARSGLGPD 154
           G NDL+ DFIR+DLVKS ISYIGKRND+A SGL PD
Sbjct: 861 GANDLIRDFIRIDLVKSPISYIGKRNDTAGSGLIPD 896


>gb|ABD93748.1| RNA polymerase beta chain [Magnolia tripetala]
          Length = 859

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -3

Query: 261 GLNDLV*DFIRMDLVKSLISYIGKRNDSARSGLGPD 154
           G NDL+ DFIR+DLVKS ISYIGKRND+A SGL PD
Sbjct: 413 GTNDLIRDFIRIDLVKSPISYIGKRNDTAGSGLIPD 448


>ref|YP_008993596.1| RNA polymerase beta' subunit (chloroplast) [Magnolia odora]
          Length = 1382

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = -3

Query: 261 GLNDLV*DFIRMDLVKSLISYIGKRNDSARSGLGPD 154
           G NDL+ DF+R+DLVKS ISYIGKRND+A SGL PD
Sbjct: 861 GANDLIRDFLRIDLVKSPISYIGKRNDTAGSGLIPD 896