BLASTX nr result

ID: Akebia25_contig00053652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00053652
         (297 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006469338.1| PREDICTED: putative pentatricopeptide repeat...    77   5e-18
ref|XP_006447959.1| hypothetical protein CICLE_v10014595mg [Citr...    77   5e-18
gb|EXB61171.1| hypothetical protein L484_007437 [Morus notabilis]      57   3e-15
ref|XP_004292328.1| PREDICTED: putative pentatricopeptide repeat...    69   3e-15
ref|XP_002303023.2| pentatricopeptide repeat-containing family p...    59   4e-15
ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat...    59   5e-15
emb|CBI38389.3| unnamed protein product [Vitis vinifera]               59   5e-15
ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat...    58   1e-14
emb|CBI18728.3| unnamed protein product [Vitis vinifera]               58   1e-14
ref|XP_007049557.1| Tetratricopeptide repeat-like superfamily pr...    63   3e-14
ref|XP_002527276.1| pentatricopeptide repeat-containing protein,...    52   3e-12
ref|NP_200728.2| protein ORGANELLE TRANSCRIPT PROCESSING 80 [Ara...    47   9e-10
ref|XP_004236339.1| PREDICTED: putative pentatricopeptide repeat...    44   2e-09
ref|XP_006282116.1| hypothetical protein CARUB_v10028364mg [Caps...    46   3e-09
ref|XP_006401000.1| hypothetical protein EUTSA_v10015737mg [Eutr...    43   2e-08
ref|XP_007151895.1| hypothetical protein PHAVU_004G084900g [Phas...    39   6e-06

>ref|XP_006469338.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Citrus sinensis]
          Length = 631

 Score = 76.6 bits (187), Expect(2) = 5e-18
 Identities = 35/61 (57%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
 Frame = -1

Query: 291 MGSSTLAVTGINF-PPNSNSRTKNSPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDP 115
           M +ST+A+ G    PPN ++++KNSP RNQ ISLLQ+C++IN+I  IHA+I++NGH+QDP
Sbjct: 1   MINSTVAIAGRPVSPPNPDNKSKNSPYRNQTISLLQKCKHINQIRSIHAKIVRNGHDQDP 60

Query: 114 F 112
           F
Sbjct: 61  F 61



 Score = 40.0 bits (92), Expect(2) = 5e-18
 Identities = 17/27 (62%), Positives = 23/27 (85%)
 Frame = -2

Query: 83  SNCNSMDYASKIFEQIKNPNVYLYTAL 3
           SN  S++YASKIFE+  +PNV+LYTA+
Sbjct: 71  SNFKSLNYASKIFERTHHPNVFLYTAI 97


>ref|XP_006447959.1| hypothetical protein CICLE_v10014595mg [Citrus clementina]
           gi|557550570|gb|ESR61199.1| hypothetical protein
           CICLE_v10014595mg [Citrus clementina]
          Length = 631

 Score = 76.6 bits (187), Expect(2) = 5e-18
 Identities = 35/61 (57%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
 Frame = -1

Query: 291 MGSSTLAVTGINF-PPNSNSRTKNSPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDP 115
           M +ST+A+ G    PPN ++++KNSP RNQ ISLLQ+C++IN+I  IHA+I++NGH+QDP
Sbjct: 1   MINSTVAIAGRPVSPPNPDNKSKNSPYRNQTISLLQKCKHINQIRSIHAKIVRNGHDQDP 60

Query: 114 F 112
           F
Sbjct: 61  F 61



 Score = 40.0 bits (92), Expect(2) = 5e-18
 Identities = 17/27 (62%), Positives = 23/27 (85%)
 Frame = -2

Query: 83  SNCNSMDYASKIFEQIKNPNVYLYTAL 3
           SN  S++YASKIFE+  +PNV+LYTA+
Sbjct: 71  SNFKSLNYASKIFERTHHPNVFLYTAI 97


>gb|EXB61171.1| hypothetical protein L484_007437 [Morus notabilis]
          Length = 631

 Score = 57.4 bits (137), Expect(2) = 3e-15
 Identities = 24/48 (50%), Positives = 35/48 (72%)
 Frame = -1

Query: 255 FPPNSNSRTKNSPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
           FP NS  ++ NS  R ++I LLQ+C++I+ +   HA+II+NG EQDPF
Sbjct: 14  FPRNSKPKSNNSTNRKEVIFLLQKCKHISHVQSTHAKIIRNGQEQDPF 61



 Score = 49.7 bits (117), Expect(2) = 3e-15
 Identities = 21/28 (75%), Positives = 26/28 (92%)
 Frame = -2

Query: 86  CSNCNSMDYASKIFEQIKNPNVYLYTAL 3
           CSN NS+DYASKIF++I+ PNV+LYTAL
Sbjct: 70  CSNLNSIDYASKIFQRIQTPNVFLYTAL 97


>ref|XP_004292328.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Fragaria vesca subsp.
           vesca]
          Length = 625

 Score = 69.3 bits (168), Expect(2) = 3e-15
 Identities = 32/58 (55%), Positives = 46/58 (79%)
 Frame = -1

Query: 285 SSTLAVTGINFPPNSNSRTKNSPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
           S+T+A+    FPPNSNS+ +N   R ++ISLLQ+C++  +IPQIHA+II+NG +QDPF
Sbjct: 4   STTVALANPAFPPNSNSKLRNPQNRKELISLLQKCKHY-QIPQIHAKIIRNGQDQDPF 60



 Score = 37.7 bits (86), Expect(2) = 3e-15
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = -2

Query: 68  MDYASKIFEQIKNPNVYLYTAL 3
           +DYASK+F + ++PNVYLYTAL
Sbjct: 71  IDYASKVFRRTQSPNVYLYTAL 92


>ref|XP_002303023.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550345712|gb|EEE82296.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 621

 Score = 58.9 bits (141), Expect(2) = 4e-15
 Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
 Frame = -1

Query: 252 PPNSNSRTKNSPVRNQ-IISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
           PPNS ++ KN+P R +  ISLLQ C++ ++IP IHA+II+N H QDPF
Sbjct: 18  PPNSGTKPKNTPNRRRHFISLLQNCKHNSEIPPIHAKIIRNHHHQDPF 65



 Score = 47.8 bits (112), Expect(2) = 4e-15
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -2

Query: 86  CSNCNSMDYASKIFEQIKNPNVYLYTAL 3
           CSN NS+ YASKIF   +NPNVYLYTAL
Sbjct: 74  CSNLNSIGYASKIFSHTQNPNVYLYTAL 101


>ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score = 58.9 bits (141), Expect(2) = 5e-15
 Identities = 30/48 (62%), Positives = 37/48 (77%), Gaps = 2/48 (4%)
 Frame = -1

Query: 249 PNSNSRTKN--SPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
           PNSNS  K+  S  + QIISLLQR R+IN++  IHAQ+I+NGH QDPF
Sbjct: 35  PNSNSNPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPF 82



 Score = 47.4 bits (111), Expect(2) = 5e-15
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = -2

Query: 86  CSNCNSMDYASKIFEQIKNPNVYLYTAL 3
           CS C+++DYAS+IF+   NPNVYLYTAL
Sbjct: 91  CSKCHAIDYASRIFQYTHNPNVYLYTAL 118


>emb|CBI38389.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score = 58.9 bits (141), Expect(2) = 5e-15
 Identities = 30/48 (62%), Positives = 37/48 (77%), Gaps = 2/48 (4%)
 Frame = -1

Query: 249 PNSNSRTKN--SPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
           PNSNS  K+  S  + QIISLLQR R+IN++  IHAQ+I+NGH QDPF
Sbjct: 25  PNSNSNPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPF 72



 Score = 47.4 bits (111), Expect(2) = 5e-15
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = -2

Query: 86  CSNCNSMDYASKIFEQIKNPNVYLYTAL 3
           CS C+++DYAS+IF+   NPNVYLYTAL
Sbjct: 81  CSKCHAIDYASRIFQYTHNPNVYLYTAL 108


>ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score = 57.8 bits (138), Expect(2) = 1e-14
 Identities = 29/48 (60%), Positives = 37/48 (77%), Gaps = 2/48 (4%)
 Frame = -1

Query: 249 PNSNSRTKN--SPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
           PNSNS  K+  S  + QIISLLQR ++IN++  IHAQ+I+NGH QDPF
Sbjct: 35  PNSNSNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPF 82



 Score = 47.4 bits (111), Expect(2) = 1e-14
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = -2

Query: 86  CSNCNSMDYASKIFEQIKNPNVYLYTAL 3
           CS C+++DYAS+IF+   NPNVYLYTAL
Sbjct: 91  CSKCHAIDYASRIFQYTHNPNVYLYTAL 118


>emb|CBI18728.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score = 57.8 bits (138), Expect(2) = 1e-14
 Identities = 29/48 (60%), Positives = 37/48 (77%), Gaps = 2/48 (4%)
 Frame = -1

Query: 249 PNSNSRTKN--SPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
           PNSNS  K+  S  + QIISLLQR ++IN++  IHAQ+I+NGH QDPF
Sbjct: 18  PNSNSNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPF 65



 Score = 47.4 bits (111), Expect(2) = 1e-14
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = -2

Query: 86  CSNCNSMDYASKIFEQIKNPNVYLYTAL 3
           CS C+++DYAS+IF+   NPNVYLYTAL
Sbjct: 74  CSKCHAIDYASRIFQYTHNPNVYLYTAL 101


>ref|XP_007049557.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
           gi|508701818|gb|EOX93714.1| Tetratricopeptide
           repeat-like superfamily protein [Theobroma cacao]
          Length = 632

 Score = 63.2 bits (152), Expect(2) = 3e-14
 Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
 Frame = -1

Query: 291 MGSSTLAVTG-INFPPNSNSRTKNSPV-RNQIISLLQRCRNINKIPQIHAQIIKNGHEQD 118
           M  STLAV G   +PPNSN  + NS + R + ISLL+ C+ IN+   IHA+II+ GH+QD
Sbjct: 1   MSYSTLAVVGNFTYPPNSNPYSFNSTLQRKEFISLLKNCKRINQTLPIHAKIIRTGHDQD 60

Query: 117 PF 112
           PF
Sbjct: 61  PF 62



 Score = 40.8 bits (94), Expect(2) = 3e-14
 Identities = 18/27 (66%), Positives = 23/27 (85%)
 Frame = -2

Query: 83  SNCNSMDYASKIFEQIKNPNVYLYTAL 3
           S  +S++YASKIF+Q  NPNV+LYTAL
Sbjct: 72  STFHSINYASKIFQQTHNPNVFLYTAL 98


>ref|XP_002527276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533369|gb|EEF35120.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score = 51.6 bits (122), Expect(2) = 3e-12
 Identities = 25/50 (50%), Positives = 32/50 (64%)
 Frame = -1

Query: 261 INFPPNSNSRTKNSPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
           I  PP     +KN P R Q+ISLLQ CR+ N+I  IHA+II+N +  D F
Sbjct: 121 IALPPILIPNSKNPPNRKQLISLLQSCRHSNQITPIHAKIIRNNYHNDAF 170



 Score = 45.4 bits (106), Expect(2) = 3e-12
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = -2

Query: 86  CSNCNSMDYASKIFEQIKNPNVYLYTAL 3
           CSN +S++YASKIF   +NPNVYLYTAL
Sbjct: 179 CSNLSSINYASKIFSFTENPNVYLYTAL 206


>ref|NP_200728.2| protein ORGANELLE TRANSCRIPT PROCESSING 80 [Arabidopsis thaliana]
           gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g59200, chloroplastic; Flags: Precursor
           gi|9759241|dbj|BAB09765.1| unnamed protein product
           [Arabidopsis thaliana] gi|332009773|gb|AED97156.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 544

 Score = 47.4 bits (111), Expect(2) = 9e-10
 Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
 Frame = -1

Query: 291 MGSSTLAVTG--INFPPNSNSRTKNSPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQD 118
           M SS  A+TG    F  + +S T     R  +IS+L+ C+NI  +P IHA+II+  H+QD
Sbjct: 1   MISSLAAITGGPSTFRRDPDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQD 60

Query: 117 PF 112
            F
Sbjct: 61  AF 62



 Score = 41.2 bits (95), Expect(2) = 9e-10
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = -2

Query: 86  CSNCNSMDYASKIFEQIKNPNVYLYTAL 3
           CS  +S+DYA  +F  + NPNVYLYTA+
Sbjct: 71  CSTLDSVDYAYDVFSYVSNPNVYLYTAM 98


>ref|XP_004236339.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Solanum lycopersicum]
          Length = 630

 Score = 44.3 bits (103), Expect(2) = 2e-09
 Identities = 18/27 (66%), Positives = 23/27 (85%)
 Frame = -2

Query: 86  CSNCNSMDYASKIFEQIKNPNVYLYTA 6
           CS C S++YASKIF QI +PNV++YTA
Sbjct: 70  CSRCCSIEYASKIFRQIPDPNVFIYTA 96



 Score = 43.1 bits (100), Expect(2) = 2e-09
 Identities = 21/47 (44%), Positives = 27/47 (57%)
 Frame = -1

Query: 252 PPNSNSRTKNSPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
           PP  NS       R Q++  LQ+C++I     IHA IIKNG+  DPF
Sbjct: 15  PPYLNSNPGCFRDRKQLLFKLQKCKSIQHAAPIHAHIIKNGNPNDPF 61


>ref|XP_006282116.1| hypothetical protein CARUB_v10028364mg [Capsella rubella]
           gi|482550820|gb|EOA15014.1| hypothetical protein
           CARUB_v10028364mg [Capsella rubella]
          Length = 550

 Score = 45.8 bits (107), Expect(2) = 3e-09
 Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
 Frame = -1

Query: 291 MGSSTLAVTGIN-FPPNSNSRTKNSPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDP 115
           + S T ++ G + F  + +S T     R  +ISLL+ C+NI ++P IHA+II+  H+QD 
Sbjct: 2   ISSLTASIGGPSAFRRDPDSNTLRLSRRKALISLLRNCKNITQVPCIHARIIRTFHDQDA 61

Query: 114 F 112
           F
Sbjct: 62  F 62



 Score = 40.8 bits (94), Expect(2) = 3e-09
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = -2

Query: 86  CSNCNSMDYASKIFEQIKNPNVYLYTAL 3
           CS  +S+DYA  +F  + NPNVYLYTA+
Sbjct: 71  CSALDSVDYACDVFRYVSNPNVYLYTAM 98


>ref|XP_006401000.1| hypothetical protein EUTSA_v10015737mg [Eutrema salsugineum]
           gi|557102090|gb|ESQ42453.1| hypothetical protein
           EUTSA_v10015737mg [Eutrema salsugineum]
          Length = 533

 Score = 43.1 bits (100), Expect(2) = 2e-08
 Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
 Frame = -1

Query: 282 STLAVTG--INFPPNSNSRTKNSPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
           S++A TG    F  +    T     R   ISLL+ C NI+++P IHA+II++ H QD F
Sbjct: 3   SSVAATGGPSAFRRDLEPNTLRLSRRKTFISLLRNCENISQVPSIHAKIIRSFHGQDAF 61



 Score = 41.2 bits (95), Expect(2) = 2e-08
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = -2

Query: 86  CSNCNSMDYASKIFEQIKNPNVYLYTAL 3
           CS  +S+DYA  +F  + NPNVYLYTA+
Sbjct: 70  CSTLDSVDYAYDVFRYVSNPNVYLYTAM 97


>ref|XP_007151895.1| hypothetical protein PHAVU_004G084900g [Phaseolus vulgaris]
           gi|561025204|gb|ESW23889.1| hypothetical protein
           PHAVU_004G084900g [Phaseolus vulgaris]
          Length = 632

 Score = 39.3 bits (90), Expect(2) = 6e-06
 Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -1

Query: 249 PNSNSRTKNSP-VRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
           P+SNS   N P +R  +ISLL+  RN   +  IH   IK G  QDPF
Sbjct: 20  PHSNS---NDPYLRKNVISLLKNLRNPQHVQPIHGHAIKTGTSQDPF 63



 Score = 36.2 bits (82), Expect(2) = 6e-06
 Identities = 14/24 (58%), Positives = 21/24 (87%)
 Frame = -2

Query: 74  NSMDYASKIFEQIKNPNVYLYTAL 3
           NS+D+A+K+F   +NPN+YLYT+L
Sbjct: 76  NSIDHATKLFHCTQNPNMYLYTSL 99


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