BLASTX nr result
ID: Akebia25_contig00053652
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00053652
(297 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006469338.1| PREDICTED: putative pentatricopeptide repeat... 77 5e-18
ref|XP_006447959.1| hypothetical protein CICLE_v10014595mg [Citr... 77 5e-18
gb|EXB61171.1| hypothetical protein L484_007437 [Morus notabilis] 57 3e-15
ref|XP_004292328.1| PREDICTED: putative pentatricopeptide repeat... 69 3e-15
ref|XP_002303023.2| pentatricopeptide repeat-containing family p... 59 4e-15
ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat... 59 5e-15
emb|CBI38389.3| unnamed protein product [Vitis vinifera] 59 5e-15
ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat... 58 1e-14
emb|CBI18728.3| unnamed protein product [Vitis vinifera] 58 1e-14
ref|XP_007049557.1| Tetratricopeptide repeat-like superfamily pr... 63 3e-14
ref|XP_002527276.1| pentatricopeptide repeat-containing protein,... 52 3e-12
ref|NP_200728.2| protein ORGANELLE TRANSCRIPT PROCESSING 80 [Ara... 47 9e-10
ref|XP_004236339.1| PREDICTED: putative pentatricopeptide repeat... 44 2e-09
ref|XP_006282116.1| hypothetical protein CARUB_v10028364mg [Caps... 46 3e-09
ref|XP_006401000.1| hypothetical protein EUTSA_v10015737mg [Eutr... 43 2e-08
ref|XP_007151895.1| hypothetical protein PHAVU_004G084900g [Phas... 39 6e-06
>ref|XP_006469338.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Citrus sinensis]
Length = 631
Score = 76.6 bits (187), Expect(2) = 5e-18
Identities = 35/61 (57%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = -1
Query: 291 MGSSTLAVTGINF-PPNSNSRTKNSPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDP 115
M +ST+A+ G PPN ++++KNSP RNQ ISLLQ+C++IN+I IHA+I++NGH+QDP
Sbjct: 1 MINSTVAIAGRPVSPPNPDNKSKNSPYRNQTISLLQKCKHINQIRSIHAKIVRNGHDQDP 60
Query: 114 F 112
F
Sbjct: 61 F 61
Score = 40.0 bits (92), Expect(2) = 5e-18
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -2
Query: 83 SNCNSMDYASKIFEQIKNPNVYLYTAL 3
SN S++YASKIFE+ +PNV+LYTA+
Sbjct: 71 SNFKSLNYASKIFERTHHPNVFLYTAI 97
>ref|XP_006447959.1| hypothetical protein CICLE_v10014595mg [Citrus clementina]
gi|557550570|gb|ESR61199.1| hypothetical protein
CICLE_v10014595mg [Citrus clementina]
Length = 631
Score = 76.6 bits (187), Expect(2) = 5e-18
Identities = 35/61 (57%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = -1
Query: 291 MGSSTLAVTGINF-PPNSNSRTKNSPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDP 115
M +ST+A+ G PPN ++++KNSP RNQ ISLLQ+C++IN+I IHA+I++NGH+QDP
Sbjct: 1 MINSTVAIAGRPVSPPNPDNKSKNSPYRNQTISLLQKCKHINQIRSIHAKIVRNGHDQDP 60
Query: 114 F 112
F
Sbjct: 61 F 61
Score = 40.0 bits (92), Expect(2) = 5e-18
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -2
Query: 83 SNCNSMDYASKIFEQIKNPNVYLYTAL 3
SN S++YASKIFE+ +PNV+LYTA+
Sbjct: 71 SNFKSLNYASKIFERTHHPNVFLYTAI 97
>gb|EXB61171.1| hypothetical protein L484_007437 [Morus notabilis]
Length = 631
Score = 57.4 bits (137), Expect(2) = 3e-15
Identities = 24/48 (50%), Positives = 35/48 (72%)
Frame = -1
Query: 255 FPPNSNSRTKNSPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
FP NS ++ NS R ++I LLQ+C++I+ + HA+II+NG EQDPF
Sbjct: 14 FPRNSKPKSNNSTNRKEVIFLLQKCKHISHVQSTHAKIIRNGQEQDPF 61
Score = 49.7 bits (117), Expect(2) = 3e-15
Identities = 21/28 (75%), Positives = 26/28 (92%)
Frame = -2
Query: 86 CSNCNSMDYASKIFEQIKNPNVYLYTAL 3
CSN NS+DYASKIF++I+ PNV+LYTAL
Sbjct: 70 CSNLNSIDYASKIFQRIQTPNVFLYTAL 97
>ref|XP_004292328.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Fragaria vesca subsp.
vesca]
Length = 625
Score = 69.3 bits (168), Expect(2) = 3e-15
Identities = 32/58 (55%), Positives = 46/58 (79%)
Frame = -1
Query: 285 SSTLAVTGINFPPNSNSRTKNSPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
S+T+A+ FPPNSNS+ +N R ++ISLLQ+C++ +IPQIHA+II+NG +QDPF
Sbjct: 4 STTVALANPAFPPNSNSKLRNPQNRKELISLLQKCKHY-QIPQIHAKIIRNGQDQDPF 60
Score = 37.7 bits (86), Expect(2) = 3e-15
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = -2
Query: 68 MDYASKIFEQIKNPNVYLYTAL 3
+DYASK+F + ++PNVYLYTAL
Sbjct: 71 IDYASKVFRRTQSPNVYLYTAL 92
>ref|XP_002303023.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550345712|gb|EEE82296.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 621
Score = 58.9 bits (141), Expect(2) = 4e-15
Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = -1
Query: 252 PPNSNSRTKNSPVRNQ-IISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
PPNS ++ KN+P R + ISLLQ C++ ++IP IHA+II+N H QDPF
Sbjct: 18 PPNSGTKPKNTPNRRRHFISLLQNCKHNSEIPPIHAKIIRNHHHQDPF 65
Score = 47.8 bits (112), Expect(2) = 4e-15
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -2
Query: 86 CSNCNSMDYASKIFEQIKNPNVYLYTAL 3
CSN NS+ YASKIF +NPNVYLYTAL
Sbjct: 74 CSNLNSIGYASKIFSHTQNPNVYLYTAL 101
>ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 58.9 bits (141), Expect(2) = 5e-15
Identities = 30/48 (62%), Positives = 37/48 (77%), Gaps = 2/48 (4%)
Frame = -1
Query: 249 PNSNSRTKN--SPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
PNSNS K+ S + QIISLLQR R+IN++ IHAQ+I+NGH QDPF
Sbjct: 35 PNSNSNPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPF 82
Score = 47.4 bits (111), Expect(2) = 5e-15
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = -2
Query: 86 CSNCNSMDYASKIFEQIKNPNVYLYTAL 3
CS C+++DYAS+IF+ NPNVYLYTAL
Sbjct: 91 CSKCHAIDYASRIFQYTHNPNVYLYTAL 118
>emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 58.9 bits (141), Expect(2) = 5e-15
Identities = 30/48 (62%), Positives = 37/48 (77%), Gaps = 2/48 (4%)
Frame = -1
Query: 249 PNSNSRTKN--SPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
PNSNS K+ S + QIISLLQR R+IN++ IHAQ+I+NGH QDPF
Sbjct: 25 PNSNSNPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPF 72
Score = 47.4 bits (111), Expect(2) = 5e-15
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = -2
Query: 86 CSNCNSMDYASKIFEQIKNPNVYLYTAL 3
CS C+++DYAS+IF+ NPNVYLYTAL
Sbjct: 81 CSKCHAIDYASRIFQYTHNPNVYLYTAL 108
>ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 57.8 bits (138), Expect(2) = 1e-14
Identities = 29/48 (60%), Positives = 37/48 (77%), Gaps = 2/48 (4%)
Frame = -1
Query: 249 PNSNSRTKN--SPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
PNSNS K+ S + QIISLLQR ++IN++ IHAQ+I+NGH QDPF
Sbjct: 35 PNSNSNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPF 82
Score = 47.4 bits (111), Expect(2) = 1e-14
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = -2
Query: 86 CSNCNSMDYASKIFEQIKNPNVYLYTAL 3
CS C+++DYAS+IF+ NPNVYLYTAL
Sbjct: 91 CSKCHAIDYASRIFQYTHNPNVYLYTAL 118
>emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 57.8 bits (138), Expect(2) = 1e-14
Identities = 29/48 (60%), Positives = 37/48 (77%), Gaps = 2/48 (4%)
Frame = -1
Query: 249 PNSNSRTKN--SPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
PNSNS K+ S + QIISLLQR ++IN++ IHAQ+I+NGH QDPF
Sbjct: 18 PNSNSNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPF 65
Score = 47.4 bits (111), Expect(2) = 1e-14
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = -2
Query: 86 CSNCNSMDYASKIFEQIKNPNVYLYTAL 3
CS C+++DYAS+IF+ NPNVYLYTAL
Sbjct: 74 CSKCHAIDYASRIFQYTHNPNVYLYTAL 101
>ref|XP_007049557.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508701818|gb|EOX93714.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 632
Score = 63.2 bits (152), Expect(2) = 3e-14
Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Frame = -1
Query: 291 MGSSTLAVTG-INFPPNSNSRTKNSPV-RNQIISLLQRCRNINKIPQIHAQIIKNGHEQD 118
M STLAV G +PPNSN + NS + R + ISLL+ C+ IN+ IHA+II+ GH+QD
Sbjct: 1 MSYSTLAVVGNFTYPPNSNPYSFNSTLQRKEFISLLKNCKRINQTLPIHAKIIRTGHDQD 60
Query: 117 PF 112
PF
Sbjct: 61 PF 62
Score = 40.8 bits (94), Expect(2) = 3e-14
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -2
Query: 83 SNCNSMDYASKIFEQIKNPNVYLYTAL 3
S +S++YASKIF+Q NPNV+LYTAL
Sbjct: 72 STFHSINYASKIFQQTHNPNVFLYTAL 98
>ref|XP_002527276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223533369|gb|EEF35120.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 507
Score = 51.6 bits (122), Expect(2) = 3e-12
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = -1
Query: 261 INFPPNSNSRTKNSPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
I PP +KN P R Q+ISLLQ CR+ N+I IHA+II+N + D F
Sbjct: 121 IALPPILIPNSKNPPNRKQLISLLQSCRHSNQITPIHAKIIRNNYHNDAF 170
Score = 45.4 bits (106), Expect(2) = 3e-12
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = -2
Query: 86 CSNCNSMDYASKIFEQIKNPNVYLYTAL 3
CSN +S++YASKIF +NPNVYLYTAL
Sbjct: 179 CSNLSSINYASKIFSFTENPNVYLYTAL 206
>ref|NP_200728.2| protein ORGANELLE TRANSCRIPT PROCESSING 80 [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product
[Arabidopsis thaliana] gi|332009773|gb|AED97156.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 544
Score = 47.4 bits (111), Expect(2) = 9e-10
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = -1
Query: 291 MGSSTLAVTG--INFPPNSNSRTKNSPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQD 118
M SS A+TG F + +S T R +IS+L+ C+NI +P IHA+II+ H+QD
Sbjct: 1 MISSLAAITGGPSTFRRDPDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQD 60
Query: 117 PF 112
F
Sbjct: 61 AF 62
Score = 41.2 bits (95), Expect(2) = 9e-10
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = -2
Query: 86 CSNCNSMDYASKIFEQIKNPNVYLYTAL 3
CS +S+DYA +F + NPNVYLYTA+
Sbjct: 71 CSTLDSVDYAYDVFSYVSNPNVYLYTAM 98
>ref|XP_004236339.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Solanum lycopersicum]
Length = 630
Score = 44.3 bits (103), Expect(2) = 2e-09
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -2
Query: 86 CSNCNSMDYASKIFEQIKNPNVYLYTA 6
CS C S++YASKIF QI +PNV++YTA
Sbjct: 70 CSRCCSIEYASKIFRQIPDPNVFIYTA 96
Score = 43.1 bits (100), Expect(2) = 2e-09
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = -1
Query: 252 PPNSNSRTKNSPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
PP NS R Q++ LQ+C++I IHA IIKNG+ DPF
Sbjct: 15 PPYLNSNPGCFRDRKQLLFKLQKCKSIQHAAPIHAHIIKNGNPNDPF 61
>ref|XP_006282116.1| hypothetical protein CARUB_v10028364mg [Capsella rubella]
gi|482550820|gb|EOA15014.1| hypothetical protein
CARUB_v10028364mg [Capsella rubella]
Length = 550
Score = 45.8 bits (107), Expect(2) = 3e-09
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = -1
Query: 291 MGSSTLAVTGIN-FPPNSNSRTKNSPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDP 115
+ S T ++ G + F + +S T R +ISLL+ C+NI ++P IHA+II+ H+QD
Sbjct: 2 ISSLTASIGGPSAFRRDPDSNTLRLSRRKALISLLRNCKNITQVPCIHARIIRTFHDQDA 61
Query: 114 F 112
F
Sbjct: 62 F 62
Score = 40.8 bits (94), Expect(2) = 3e-09
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = -2
Query: 86 CSNCNSMDYASKIFEQIKNPNVYLYTAL 3
CS +S+DYA +F + NPNVYLYTA+
Sbjct: 71 CSALDSVDYACDVFRYVSNPNVYLYTAM 98
>ref|XP_006401000.1| hypothetical protein EUTSA_v10015737mg [Eutrema salsugineum]
gi|557102090|gb|ESQ42453.1| hypothetical protein
EUTSA_v10015737mg [Eutrema salsugineum]
Length = 533
Score = 43.1 bits (100), Expect(2) = 2e-08
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -1
Query: 282 STLAVTG--INFPPNSNSRTKNSPVRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
S++A TG F + T R ISLL+ C NI+++P IHA+II++ H QD F
Sbjct: 3 SSVAATGGPSAFRRDLEPNTLRLSRRKTFISLLRNCENISQVPSIHAKIIRSFHGQDAF 61
Score = 41.2 bits (95), Expect(2) = 2e-08
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = -2
Query: 86 CSNCNSMDYASKIFEQIKNPNVYLYTAL 3
CS +S+DYA +F + NPNVYLYTA+
Sbjct: 70 CSTLDSVDYAYDVFRYVSNPNVYLYTAM 97
>ref|XP_007151895.1| hypothetical protein PHAVU_004G084900g [Phaseolus vulgaris]
gi|561025204|gb|ESW23889.1| hypothetical protein
PHAVU_004G084900g [Phaseolus vulgaris]
Length = 632
Score = 39.3 bits (90), Expect(2) = 6e-06
Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 249 PNSNSRTKNSP-VRNQIISLLQRCRNINKIPQIHAQIIKNGHEQDPF 112
P+SNS N P +R +ISLL+ RN + IH IK G QDPF
Sbjct: 20 PHSNS---NDPYLRKNVISLLKNLRNPQHVQPIHGHAIKTGTSQDPF 63
Score = 36.2 bits (82), Expect(2) = 6e-06
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = -2
Query: 74 NSMDYASKIFEQIKNPNVYLYTAL 3
NS+D+A+K+F +NPN+YLYT+L
Sbjct: 76 NSIDHATKLFHCTQNPNMYLYTSL 99