BLASTX nr result

ID: Akebia25_contig00053566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00053566
         (293 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]                68   1e-09

>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 36/72 (50%), Positives = 47/72 (65%)
 Frame = -3

Query: 219 KPKGNCYVCGKPGHFIAEYRFRSTKERLRQNVVNLT*TDEDSIVAVIL*VNLVKNIRE*V 40
           K KGNC+VCGKPGH   + R R+  +   +   NL    ED+IVAV+  VNLV N+ + V
Sbjct: 267 KKKGNCFVCGKPGHHAPQCRHRAKNDYPPK--ANLA-EGEDTIVAVVSQVNLVTNVSKWV 323

Query: 39  IDTGAIRHICGN 4
           +D+GA RHIC N
Sbjct: 324 VDSGATRHICAN 335


Top