BLASTX nr result
ID: Akebia25_contig00053174
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00053174
(720 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADW82088.1| photosystem II D2 protein [Phaeoceros carolinianus] 77 6e-12
ref|YP_001876562.1| photosystem II protein D2 [Welwitschia mirab... 77 6e-12
ref|NP_569626.1| photosystem II protein D2 [Psilotum nudum] gi|7... 77 8e-12
gb|AGQ03791.1| photosystem II protein D2 (chloroplast) [Helminth... 77 8e-12
gb|AFM54146.1| PsbD (chloroplast) [Ceratozamia hildae] gi|392283... 77 8e-12
ref|YP_005352943.1| psbD gene product (chloroplast) [Mankyua che... 77 8e-12
dbj|BAL03645.1| photosystem II protein D2 (chloroplast) [Bowenia... 77 8e-12
gb|ACA49176.1| photosystem II D2 protein [Tmesipteris elongata] 77 8e-12
gb|ACA49170.1| photosystem II D2 protein [Helminthostachys zeyla... 77 8e-12
ref|YP_001312191.1| photosystem II protein D2 [Cycas taitungensi... 77 8e-12
gb|AAW21845.1| photosystem II D2 protein, partial (chloroplast) ... 77 8e-12
gb|AAQ04781.1| photosystem II D2 protein [Bowenia serrulata] 77 8e-12
gb|AAQ04785.1| photosystem II D2 protein [Ceratozamia miqueliana... 77 8e-12
gb|AAQ04787.1| photosystem II D2 protein [Cycas revoluta] 77 8e-12
gb|AAF73303.1| photosystem II D2 protein [Zamia furfuracea] 77 8e-12
gb|AGQ03783.1| photosystem II protein D2 (chloroplast) [Botrychi... 76 1e-11
gb|ADZ93625.1| photosystem II D2 protein [Joinvillea ascendens] 76 1e-11
gb|AFA27472.1| photosystem II protein D2 [Joinvillea ascendens] 76 1e-11
gb|ACT67287.1| photosystem II protein D2, partial (chloroplast) ... 76 1e-11
gb|ABR21942.1| photosystem II D2 protein [Joinvillea plicata] 76 1e-11
>gb|ADW82088.1| photosystem II D2 protein [Phaeoceros carolinianus]
Length = 327
Score = 77.0 bits (188), Expect = 6e-12
Identities = 41/68 (60%), Positives = 49/68 (72%)
Frame = +3
Query: 192 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLVNAKDSLHAVAPNT 371
FV HGSFGLIGFM+ F+LA SVQL+PYNAI FS IAVFVSVFL+ + + +
Sbjct: 88 FVALHGSFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLI------YPLGQSG 141
Query: 372 W*FSLSFG 395
W F+LSFG
Sbjct: 142 WFFALSFG 149
>ref|YP_001876562.1| photosystem II protein D2 [Welwitschia mirabilis]
gi|221222715|sp|B2Y1U5.1|PSBD_WELMI RecName:
Full=Photosystem II D2 protein; Short=PSII D2 protein;
AltName: Full=Photosystem Q(A) protein
gi|163311617|gb|ABY26775.1| photosystem II protein D2
[Welwitschia mirabilis] gi|220983405|dbj|BAH11174.1|
photosystem II protein D2 (chloroplast) [Welwitschia
mirabilis]
Length = 353
Score = 77.0 bits (188), Expect = 6e-12
Identities = 41/68 (60%), Positives = 50/68 (73%)
Frame = +3
Query: 192 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLVNAKDSLHAVAPNT 371
FV FHG+FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+ + + +
Sbjct: 114 FVAFHGAFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI------YPLGQSG 167
Query: 372 W*FSLSFG 395
W F+ SFG
Sbjct: 168 WFFAPSFG 175
>ref|NP_569626.1| photosystem II protein D2 [Psilotum nudum]
gi|75248913|sp|Q8WI19.1|PSBD_PSINU RecName:
Full=Photosystem II D2 protein; Short=PSII D2 protein;
AltName: Full=Photosystem Q(A) protein
gi|18389461|dbj|BAB84213.1| PSII D2-protein [Psilotum
nudum] gi|441018014|gb|AGC26790.1| photosystem II D2
protein (chloroplast) [Psilotum nudum]
Length = 353
Score = 76.6 bits (187), Expect = 8e-12
Identities = 40/68 (58%), Positives = 50/68 (73%)
Frame = +3
Query: 192 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLVNAKDSLHAVAPNT 371
F+ FHG+FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+ + + +
Sbjct: 114 FIAFHGAFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI------YPLGQSG 167
Query: 372 W*FSLSFG 395
W F+ SFG
Sbjct: 168 WFFAPSFG 175
>gb|AGQ03791.1| photosystem II protein D2 (chloroplast) [Helminthostachys
zeylanica]
Length = 353
Score = 76.6 bits (187), Expect = 8e-12
Identities = 41/68 (60%), Positives = 49/68 (72%)
Frame = +3
Query: 192 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLVNAKDSLHAVAPNT 371
FV FHGSFGLIGFM+ F+LA SVQL+PYNAI FS IAVFVSVFL+ + + +
Sbjct: 114 FVAFHGSFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLI------YPLGQSG 167
Query: 372 W*FSLSFG 395
W F+ SFG
Sbjct: 168 WFFAPSFG 175
>gb|AFM54146.1| PsbD (chloroplast) [Ceratozamia hildae] gi|392283332|gb|AFM54147.1|
PsbD (chloroplast) [Zamia furfuracea]
Length = 353
Score = 76.6 bits (187), Expect = 8e-12
Identities = 41/68 (60%), Positives = 49/68 (72%)
Frame = +3
Query: 192 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLVNAKDSLHAVAPNT 371
FV FHG FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+ + + +
Sbjct: 114 FVAFHGGFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI------YPLGQSG 167
Query: 372 W*FSLSFG 395
W F+ SFG
Sbjct: 168 WFFAPSFG 175
>ref|YP_005352943.1| psbD gene product (chloroplast) [Mankyua chejuensis]
gi|325975839|gb|ADZ47975.1| photosystem II protein D2
[Mankyua chejuensis]
Length = 353
Score = 76.6 bits (187), Expect = 8e-12
Identities = 41/68 (60%), Positives = 49/68 (72%)
Frame = +3
Query: 192 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLVNAKDSLHAVAPNT 371
FV FHGSFGLIGFM+ F+LA SVQL+PYNAI FS IAVFVSVFL+ + + +
Sbjct: 114 FVAFHGSFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLI------YPLGQSG 167
Query: 372 W*FSLSFG 395
W F+ SFG
Sbjct: 168 WFFAPSFG 175
>dbj|BAL03645.1| photosystem II protein D2 (chloroplast) [Bowenia serrulata]
Length = 353
Score = 76.6 bits (187), Expect = 8e-12
Identities = 41/68 (60%), Positives = 49/68 (72%)
Frame = +3
Query: 192 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLVNAKDSLHAVAPNT 371
FV FHG FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+ + + +
Sbjct: 114 FVAFHGGFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI------YPLGQSG 167
Query: 372 W*FSLSFG 395
W F+ SFG
Sbjct: 168 WFFAPSFG 175
>gb|ACA49176.1| photosystem II D2 protein [Tmesipteris elongata]
Length = 322
Score = 76.6 bits (187), Expect = 8e-12
Identities = 40/68 (58%), Positives = 50/68 (73%)
Frame = +3
Query: 192 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLVNAKDSLHAVAPNT 371
F+ FHG+FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+ + + +
Sbjct: 83 FIAFHGAFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI------YPLGQSG 136
Query: 372 W*FSLSFG 395
W F+ SFG
Sbjct: 137 WFFAPSFG 144
>gb|ACA49170.1| photosystem II D2 protein [Helminthostachys zeylanica]
Length = 326
Score = 76.6 bits (187), Expect = 8e-12
Identities = 41/68 (60%), Positives = 49/68 (72%)
Frame = +3
Query: 192 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLVNAKDSLHAVAPNT 371
FV FHGSFGLIGFM+ F+LA SVQL+PYNAI FS IAVFVSVFL+ + + +
Sbjct: 87 FVAFHGSFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLI------YPLGQSG 140
Query: 372 W*FSLSFG 395
W F+ SFG
Sbjct: 141 WFFAPSFG 148
>ref|YP_001312191.1| photosystem II protein D2 [Cycas taitungensis]
gi|452848984|ref|YP_007474663.1| photosystem II protein
D2 (chloroplast) [Cycas revoluta]
gi|221222684|sp|A6H5G6.1|PSBD_CYCTA RecName:
Full=Photosystem II D2 protein; Short=PSII D2 protein;
AltName: Full=Photosystem Q(A) protein
gi|149941508|dbj|BAF64932.1| photosystem II protein D2
(chloroplast) [Cycas taitungensis]
gi|156598075|gb|ABU85303.1| photosystem II protein D2
[Cycas micronesica] gi|372863139|gb|AEX99212.1|
photosystem II protein D2 (chloroplast) [Cycas revoluta]
Length = 353
Score = 76.6 bits (187), Expect = 8e-12
Identities = 41/68 (60%), Positives = 49/68 (72%)
Frame = +3
Query: 192 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLVNAKDSLHAVAPNT 371
FV FHG FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+ + + +
Sbjct: 114 FVAFHGGFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI------YPLGQSG 167
Query: 372 W*FSLSFG 395
W F+ SFG
Sbjct: 168 WFFAPSFG 175
>gb|AAW21845.1| photosystem II D2 protein, partial (chloroplast) [Microcycas
calocoma]
Length = 312
Score = 76.6 bits (187), Expect = 8e-12
Identities = 41/68 (60%), Positives = 49/68 (72%)
Frame = +3
Query: 192 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLVNAKDSLHAVAPNT 371
FV FHG FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+ + + +
Sbjct: 73 FVAFHGGFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI------YPLGQSG 126
Query: 372 W*FSLSFG 395
W F+ SFG
Sbjct: 127 WFFAPSFG 134
>gb|AAQ04781.1| photosystem II D2 protein [Bowenia serrulata]
Length = 326
Score = 76.6 bits (187), Expect = 8e-12
Identities = 41/68 (60%), Positives = 49/68 (72%)
Frame = +3
Query: 192 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLVNAKDSLHAVAPNT 371
FV FHG FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+ + + +
Sbjct: 87 FVAFHGGFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI------YPLGQSG 140
Query: 372 W*FSLSFG 395
W F+ SFG
Sbjct: 141 WFFAPSFG 148
>gb|AAQ04785.1| photosystem II D2 protein [Ceratozamia miqueliana]
gi|33317762|gb|AAQ04791.1| photosystem II D2 protein
[Encephalartos barteri] gi|33317771|gb|AAQ04797.1|
photosystem II D2 protein [Stangeria eriopus]
gi|56683010|gb|AAW21841.1| photosystem II D2 protein,
partial (chloroplast) [Lepidozamia hopei]
gi|56683013|gb|AAW21843.1| photosystem II D2 protein,
partial (chloroplast) [Macrozamia moorei]
Length = 326
Score = 76.6 bits (187), Expect = 8e-12
Identities = 41/68 (60%), Positives = 49/68 (72%)
Frame = +3
Query: 192 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLVNAKDSLHAVAPNT 371
FV FHG FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+ + + +
Sbjct: 87 FVAFHGGFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI------YPLGQSG 140
Query: 372 W*FSLSFG 395
W F+ SFG
Sbjct: 141 WFFAPSFG 148
>gb|AAQ04787.1| photosystem II D2 protein [Cycas revoluta]
Length = 326
Score = 76.6 bits (187), Expect = 8e-12
Identities = 41/68 (60%), Positives = 49/68 (72%)
Frame = +3
Query: 192 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLVNAKDSLHAVAPNT 371
FV FHG FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+ + + +
Sbjct: 87 FVAFHGGFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI------YPLGQSG 140
Query: 372 W*FSLSFG 395
W F+ SFG
Sbjct: 141 WFFAPSFG 148
>gb|AAF73303.1| photosystem II D2 protein [Zamia furfuracea]
Length = 326
Score = 76.6 bits (187), Expect = 8e-12
Identities = 41/68 (60%), Positives = 49/68 (72%)
Frame = +3
Query: 192 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLVNAKDSLHAVAPNT 371
FV FHG FGLIGFM+ F+LA SVQL+PYNAI FSA IAVFVSVFL+ + + +
Sbjct: 87 FVAFHGGFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLI------YPLGQSG 140
Query: 372 W*FSLSFG 395
W F+ SFG
Sbjct: 141 WFFAPSFG 148
>gb|AGQ03783.1| photosystem II protein D2 (chloroplast) [Botrychium strictum]
Length = 353
Score = 76.3 bits (186), Expect = 1e-11
Identities = 41/68 (60%), Positives = 49/68 (72%)
Frame = +3
Query: 192 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLVNAKDSLHAVAPNT 371
FV FHGSFGLIGFM+ F+LA SVQL+PYNAI FS IAVFVSVF S++ + +
Sbjct: 114 FVAFHGSFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVF------SIYPLGQSG 167
Query: 372 W*FSLSFG 395
W F+ SFG
Sbjct: 168 WFFAPSFG 175
>gb|ADZ93625.1| photosystem II D2 protein [Joinvillea ascendens]
Length = 294
Score = 76.3 bits (186), Expect = 1e-11
Identities = 41/68 (60%), Positives = 50/68 (73%)
Frame = +3
Query: 192 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLVNAKDSLHAVAPNT 371
FV HGSFGLIGFM+ F+LA SVQL+PYNAI+FSA IAVFVSVFL+ + + +
Sbjct: 55 FVALHGSFGLIGFMLRQFELARSVQLRPYNAISFSAPIAVFVSVFLI------YPLGQSG 108
Query: 372 W*FSLSFG 395
W F+ SFG
Sbjct: 109 WFFAPSFG 116
>gb|AFA27472.1| photosystem II protein D2 [Joinvillea ascendens]
Length = 353
Score = 76.3 bits (186), Expect = 1e-11
Identities = 41/68 (60%), Positives = 50/68 (73%)
Frame = +3
Query: 192 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLVNAKDSLHAVAPNT 371
FV HGSFGLIGFM+ F+LA SVQL+PYNAI+FSA IAVFVSVFL+ + + +
Sbjct: 114 FVALHGSFGLIGFMLRQFELARSVQLRPYNAISFSAPIAVFVSVFLI------YPLGQSG 167
Query: 372 W*FSLSFG 395
W F+ SFG
Sbjct: 168 WFFAPSFG 175
>gb|ACT67287.1| photosystem II protein D2, partial (chloroplast) [Joinvillea
plicata]
Length = 345
Score = 76.3 bits (186), Expect = 1e-11
Identities = 41/68 (60%), Positives = 50/68 (73%)
Frame = +3
Query: 192 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLVNAKDSLHAVAPNT 371
FV HGSFGLIGFM+ F+LA SVQL+PYNAI+FSA IAVFVSVFL+ + + +
Sbjct: 106 FVALHGSFGLIGFMLRQFELARSVQLRPYNAISFSAPIAVFVSVFLI------YPLGQSG 159
Query: 372 W*FSLSFG 395
W F+ SFG
Sbjct: 160 WFFAPSFG 167
>gb|ABR21942.1| photosystem II D2 protein [Joinvillea plicata]
Length = 326
Score = 76.3 bits (186), Expect = 1e-11
Identities = 41/68 (60%), Positives = 50/68 (73%)
Frame = +3
Query: 192 FVTFHGSFGLIGFMVH*FKLA*SVQLQPYNAITFSASIAVFVSVFLVNAKDSLHAVAPNT 371
FV HGSFGLIGFM+ F+LA SVQL+PYNAI+FSA IAVFVSVFL+ + + +
Sbjct: 87 FVALHGSFGLIGFMLRQFELARSVQLRPYNAISFSAPIAVFVSVFLI------YPLGQSG 140
Query: 372 W*FSLSFG 395
W F+ SFG
Sbjct: 141 WFFAPSFG 148