BLASTX nr result
ID: Akebia25_contig00051702
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia25_contig00051702 (258 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 52 3e-07 gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D... 55 6e-07 gb|AAD17357.1| contains similarity to retrovirus-related polypro... 54 6e-07 ref|XP_004150929.1| PREDICTED: uncharacterized protein LOC101213... 53 1e-06 dbj|BAA22288.1| polyprotein [Oryza australiensis] 52 2e-06 ref|XP_004153206.1| PREDICTED: uncharacterized protein LOC101203... 51 3e-06 emb|CAE03687.2| OSJNBb0026E15.5 [Oryza sativa Japonica Group] 52 3e-06 emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group] 49 4e-06 gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja... 50 4e-06 gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc... 50 4e-06 gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subc... 54 5e-06 gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 50 6e-06 gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc... 51 6e-06 gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group] 51 6e-06 gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 52 6e-06 gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-... 51 6e-06 emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera] 54 1e-05 >gb|ADJ18449.1| gag/pol protein [Bryonia dioica] Length = 1292 Score = 52.4 bits (124), Expect(2) = 3e-07 Identities = 27/50 (54%), Positives = 35/50 (70%) Frame = +2 Query: 107 TL*SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256 TL SD GG+Y+ S+ DYL + I SQ +AP PQ+N S RRN+TLLD+ Sbjct: 566 TLRSDRGGEYMDSKFQDYLIEFGIQSQLSAPSTPQQNGVSERRNRTLLDM 615 Score = 27.7 bits (60), Expect(2) = 3e-07 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +1 Query: 1 TRYGYTNLLHHKSENILK 54 +RYG+ LLHHKSE+ K Sbjct: 531 SRYGHVYLLHHKSESFEK 548 >gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w] Length = 1303 Score = 55.5 bits (132), Expect(2) = 6e-07 Identities = 29/47 (61%), Positives = 34/47 (72%) Frame = +2 Query: 116 SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256 SD GG+YLS E LDYLK+ IVSQ T P PQ N + RRN+TLLD+ Sbjct: 539 SDRGGEYLSIEFLDYLKECGIVSQLTPPRTPQLNGVAERRNRTLLDM 585 Score = 23.5 bits (49), Expect(2) = 6e-07 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +1 Query: 1 TRYGYTNLLHHKSENILK 54 +RYGY L+ HKS+ K Sbjct: 501 SRYGYIYLIKHKSDTFEK 518 >gb|AAD17357.1| contains similarity to retrovirus-related polyproteins [Arabidopsis thaliana] gi|7267382|emb|CAB77943.1| putative transposon protein [Arabidopsis thaliana] Length = 769 Score = 54.3 bits (129), Expect(2) = 6e-07 Identities = 28/47 (59%), Positives = 33/47 (70%) Frame = +2 Query: 116 SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256 SD GG+YLS D+L++ IVSQ T PG PQ N S RRNQTLLD+ Sbjct: 240 SDRGGEYLSQVFSDHLRECGIVSQLTPPGTPQGNGVSERRNQTLLDM 286 Score = 24.6 bits (52), Expect(2) = 6e-07 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = +1 Query: 4 RYGYTNLLHHKSENILKSSK 63 RYGY L+ HK E+ KS + Sbjct: 203 RYGYVYLMKHKLESFEKSKE 222 >ref|XP_004150929.1| PREDICTED: uncharacterized protein LOC101213227 [Cucumis sativus] Length = 513 Score = 52.8 bits (125), Expect(2) = 1e-06 Identities = 26/47 (55%), Positives = 32/47 (68%) Frame = +2 Query: 116 SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256 SD GG+Y+ DYL +N I SQ +AP PQ+N S RRNQTLLD+ Sbjct: 340 SDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNQTLLDM 386 Score = 25.4 bits (54), Expect(2) = 1e-06 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = +1 Query: 1 TRYGYTNLLHHKSENILK 54 +RYG+ L+HHKS ++ K Sbjct: 302 SRYGHIYLIHHKSNSLEK 319 >dbj|BAA22288.1| polyprotein [Oryza australiensis] Length = 1317 Score = 52.0 bits (123), Expect(2) = 2e-06 Identities = 27/47 (57%), Positives = 33/47 (70%) Frame = +2 Query: 116 SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256 SD GG+Y+S E ++LKD IV Q T PG PQ N S RRN+TLLD+ Sbjct: 564 SDRGGEYVSQEFGNHLKDCGIVPQLTPPGTPQWNGVSERRNRTLLDM 610 Score = 25.4 bits (54), Expect(2) = 2e-06 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +1 Query: 1 TRYGYTNLLHHKSENILK 54 +RYGY L+ HKSE+ K Sbjct: 526 SRYGYIYLMRHKSESFEK 543 >ref|XP_004153206.1| PREDICTED: uncharacterized protein LOC101203928, partial [Cucumis sativus] Length = 486 Score = 51.2 bits (121), Expect(2) = 3e-06 Identities = 25/47 (53%), Positives = 32/47 (68%) Frame = +2 Query: 116 SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256 SD GG+Y+ DYL +N I SQ +AP PQ+N S RRN+TLLD+ Sbjct: 367 SDRGGEYMDLRFQDYLIENGIKSQLSAPSTPQQNGVSERRNRTLLDM 413 Score = 25.4 bits (54), Expect(2) = 3e-06 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = +1 Query: 1 TRYGYTNLLHHKSENILK 54 +RYG+ L+HHKS ++ K Sbjct: 329 SRYGHIYLIHHKSNSLEK 346 >emb|CAE03687.2| OSJNBb0026E15.5 [Oryza sativa Japonica Group] Length = 448 Score = 52.0 bits (123), Expect(2) = 3e-06 Identities = 31/70 (44%), Positives = 39/70 (55%) Frame = +2 Query: 47 F*KVQRIHTXXXXXXXXFI*TL*SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS 226 F K + H I L SD GG+YL+ E ++LK+ IV Q T PG PQ N S Sbjct: 120 FEKFKEFHNEVQNHLDKTIKYLRSDRGGEYLTLEFGNHLKEGGIVPQLTPPGMPQWNGVS 179 Query: 227 *RRNQTLLDV 256 RRN+TLLD+ Sbjct: 180 ERRNRTLLDM 189 Score = 24.6 bits (52), Expect(2) = 3e-06 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = +1 Query: 1 TRYGYTNLLHHKSE 42 +RYGY L+ HKSE Sbjct: 105 SRYGYVYLMRHKSE 118 >emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group] Length = 923 Score = 49.3 bits (116), Expect(2) = 4e-06 Identities = 26/47 (55%), Positives = 32/47 (68%) Frame = +2 Query: 116 SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256 SD GG+YLS E ++LK I Q+T PG PQ N S RRN+TLLD+ Sbjct: 523 SDCGGEYLSLEFGNHLKKCGIAPQFTPPGTPQWNGVSERRNRTLLDM 569 Score = 26.9 bits (58), Expect(2) = 4e-06 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +1 Query: 1 TRYGYTNLLHHKSENILKSSK 63 +RYGY L+ HKSE+ K K Sbjct: 485 SRYGYVYLMRHKSESFEKFKK 505 >gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group] Length = 700 Score = 50.4 bits (119), Expect(2) = 4e-06 Identities = 31/72 (43%), Positives = 40/72 (55%) Frame = +2 Query: 41 KTF*KVQRIHTXXXXXXXXFI*TL*SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENS 220 ++F K + H I L SD GG+Y S E ++LK+ IV Q T PG PQ N Sbjct: 88 ESFEKFKEFHNEVQNHLDKTIKYLRSDRGGEYWSLEFGNHLKECGIVPQLTPPGTPQLNG 147 Query: 221 AS*RRNQTLLDV 256 S RRN+TLLD+ Sbjct: 148 VSKRRNRTLLDM 159 Score = 25.8 bits (55), Expect(2) = 4e-06 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +1 Query: 1 TRYGYTNLLHHKSENILK 54 +RYGY L+ HKSE+ K Sbjct: 75 SRYGYVYLMRHKSESFEK 92 >gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 655 Score = 50.4 bits (119), Expect(2) = 4e-06 Identities = 31/72 (43%), Positives = 40/72 (55%) Frame = +2 Query: 41 KTF*KVQRIHTXXXXXXXXFI*TL*SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENS 220 ++F K + H I L SD GG+Y S E ++LK+ IV Q T PG PQ N Sbjct: 88 ESFEKFKEFHNEVQNHLDKTIKYLRSDRGGEYWSLEFGNHLKECGIVPQLTPPGTPQLNG 147 Query: 221 AS*RRNQTLLDV 256 S RRN+TLLD+ Sbjct: 148 VSKRRNRTLLDM 159 Score = 25.8 bits (55), Expect(2) = 4e-06 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +1 Query: 1 TRYGYTNLLHHKSENILK 54 +RYGY L+ HKSE+ K Sbjct: 75 SRYGYVYLMRHKSESFEK 92 >gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 810 Score = 53.5 bits (127), Expect(2) = 5e-06 Identities = 33/72 (45%), Positives = 40/72 (55%) Frame = +2 Query: 41 KTF*KVQRIHTXXXXXXXXFI*TL*SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENS 220 +TF K + I L SD GGKYLS E ++LK+ IV Q T PG PQ N Sbjct: 248 ETFEKFKEFQNEVQNHLGKTIKYLRSDRGGKYLSLEFGNHLKECRIVPQLTLPGTPQWNG 307 Query: 221 AS*RRNQTLLDV 256 S RRN+TLLD+ Sbjct: 308 VSERRNRTLLDM 319 Score = 22.3 bits (46), Expect(2) = 5e-06 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = +1 Query: 1 TRYGYTNLLHHKSENILK 54 +RYGY L+ KSE K Sbjct: 235 SRYGYVYLMRQKSETFEK 252 >gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group] gi|62701883|gb|AAX92956.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gi|108864259|gb|ABA92827.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1184 Score = 49.7 bits (117), Expect(2) = 6e-06 Identities = 31/72 (43%), Positives = 40/72 (55%) Frame = +2 Query: 41 KTF*KVQRIHTXXXXXXXXFI*TL*SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENS 220 ++F K + H I L SD GG+YLS E ++LK+ IV Q T PG PQ N Sbjct: 515 ESFEKFKEFHNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNG 574 Query: 221 AS*RRNQTLLDV 256 S RN+TLLD+ Sbjct: 575 VSEWRNRTLLDM 586 Score = 25.8 bits (55), Expect(2) = 6e-06 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +1 Query: 1 TRYGYTNLLHHKSENILK 54 +RYGY L+ HKSE+ K Sbjct: 502 SRYGYVYLMRHKSESFEK 519 >gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1073 Score = 50.8 bits (120), Expect(2) = 6e-06 Identities = 27/47 (57%), Positives = 33/47 (70%) Frame = +2 Query: 116 SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256 SD GG+YLS E ++LK+ IV Q T PG PQ N S RRN+TLLD+ Sbjct: 656 SDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGVSERRNRTLLDM 702 Score = 24.6 bits (52), Expect(2) = 6e-06 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +1 Query: 1 TRYGYTNLLHHKSENILKSSK 63 +R GY L+ HKSE++ K K Sbjct: 618 SRCGYVYLMRHKSESVEKFKK 638 >gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1063 Score = 50.8 bits (120), Expect(2) = 6e-06 Identities = 27/47 (57%), Positives = 33/47 (70%) Frame = +2 Query: 116 SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256 SD GG+YLS E ++LK+ IV Q T PG PQ N S RRN+TLLD+ Sbjct: 656 SDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGVSERRNRTLLDM 702 Score = 24.6 bits (52), Expect(2) = 6e-06 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +1 Query: 1 TRYGYTNLLHHKSENILKSSK 63 +R GY L+ HKSE++ K K Sbjct: 618 SRCGYVYLMRHKSESVEKFKK 638 >gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score 19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1| putative retrotransposon protein [Arabidopsis thaliana] Length = 964 Score = 52.4 bits (124), Expect(2) = 6e-06 Identities = 27/47 (57%), Positives = 33/47 (70%) Frame = +2 Query: 116 SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256 SD GG+YLS D+L++ IVSQ T PG PQ N S RRN+TLLD+ Sbjct: 208 SDRGGEYLSQVFSDHLRECGIVSQLTPPGTPQWNGVSERRNRTLLDM 254 Score = 23.1 bits (48), Expect(2) = 6e-06 Identities = 8/15 (53%), Positives = 12/15 (80%) Frame = +1 Query: 1 TRYGYTNLLHHKSEN 45 +RYGY L+ HKS++ Sbjct: 170 SRYGYVYLMKHKSKS 184 >gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gi|77550379|gb|ABA93176.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 938 Score = 50.8 bits (120), Expect(2) = 6e-06 Identities = 27/47 (57%), Positives = 33/47 (70%) Frame = +2 Query: 116 SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256 SD GG+YLS E ++LK+ IV Q T PG PQ N S RRN+TLLD+ Sbjct: 449 SDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGVSERRNRTLLDM 495 Score = 24.6 bits (52), Expect(2) = 6e-06 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +1 Query: 1 TRYGYTNLLHHKSENILK 54 +RYGY L+ HKS++ K Sbjct: 411 SRYGYVYLMRHKSDSFEK 428 >emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera] Length = 1544 Score = 53.9 bits (128), Expect(2) = 1e-05 Identities = 25/53 (47%), Positives = 38/53 (71%) Frame = +2 Query: 98 FI*TL*SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256 +I TL SD GG+Y+S E + +L + I SQ +APG PQ+N + RRN+TL+++ Sbjct: 882 YIKTLRSDHGGEYISREFITFLSEQGITSQLSAPGMPQQNGVAERRNRTLMEM 934 Score = 20.8 bits (42), Expect(2) = 1e-05 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +1 Query: 1 TRYGYTNLLHHKSE 42 +RYGY LL KSE Sbjct: 850 SRYGYIYLLCRKSE 863