BLASTX nr result

ID: Akebia25_contig00051702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00051702
         (258 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                        52   3e-07
gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D...    55   6e-07
gb|AAD17357.1| contains similarity to retrovirus-related polypro...    54   6e-07
ref|XP_004150929.1| PREDICTED: uncharacterized protein LOC101213...    53   1e-06
dbj|BAA22288.1| polyprotein [Oryza australiensis]                      52   2e-06
ref|XP_004153206.1| PREDICTED: uncharacterized protein LOC101203...    51   3e-06
emb|CAE03687.2| OSJNBb0026E15.5 [Oryza sativa Japonica Group]          52   3e-06
emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]          49   4e-06
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja...    50   4e-06
gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc...    50   4e-06
gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subc...    54   5e-06
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...    50   6e-06
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...    51   6e-06
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]      51   6e-06
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...    52   6e-06
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-...    51   6e-06
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]    54   1e-05

>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score = 52.4 bits (124), Expect(2) = 3e-07
 Identities = 27/50 (54%), Positives = 35/50 (70%)
 Frame = +2

Query: 107 TL*SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256
           TL SD GG+Y+ S+  DYL +  I SQ +AP  PQ+N  S RRN+TLLD+
Sbjct: 566 TLRSDRGGEYMDSKFQDYLIEFGIQSQLSAPSTPQQNGVSERRNRTLLDM 615



 Score = 27.7 bits (60), Expect(2) = 3e-07
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +1

Query: 1   TRYGYTNLLHHKSENILK 54
           +RYG+  LLHHKSE+  K
Sbjct: 531 SRYGHVYLLHHKSESFEK 548


>gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
          Length = 1303

 Score = 55.5 bits (132), Expect(2) = 6e-07
 Identities = 29/47 (61%), Positives = 34/47 (72%)
 Frame = +2

Query: 116 SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256
           SD GG+YLS E LDYLK+  IVSQ T P  PQ N  + RRN+TLLD+
Sbjct: 539 SDRGGEYLSIEFLDYLKECGIVSQLTPPRTPQLNGVAERRNRTLLDM 585



 Score = 23.5 bits (49), Expect(2) = 6e-07
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 1   TRYGYTNLLHHKSENILK 54
           +RYGY  L+ HKS+   K
Sbjct: 501 SRYGYIYLIKHKSDTFEK 518


>gb|AAD17357.1| contains similarity to retrovirus-related polyproteins [Arabidopsis
           thaliana] gi|7267382|emb|CAB77943.1| putative transposon
           protein [Arabidopsis thaliana]
          Length = 769

 Score = 54.3 bits (129), Expect(2) = 6e-07
 Identities = 28/47 (59%), Positives = 33/47 (70%)
 Frame = +2

Query: 116 SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256
           SD GG+YLS    D+L++  IVSQ T PG PQ N  S RRNQTLLD+
Sbjct: 240 SDRGGEYLSQVFSDHLRECGIVSQLTPPGTPQGNGVSERRNQTLLDM 286



 Score = 24.6 bits (52), Expect(2) = 6e-07
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 4   RYGYTNLLHHKSENILKSSK 63
           RYGY  L+ HK E+  KS +
Sbjct: 203 RYGYVYLMKHKLESFEKSKE 222


>ref|XP_004150929.1| PREDICTED: uncharacterized protein LOC101213227 [Cucumis sativus]
          Length = 513

 Score = 52.8 bits (125), Expect(2) = 1e-06
 Identities = 26/47 (55%), Positives = 32/47 (68%)
 Frame = +2

Query: 116 SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256
           SD GG+Y+     DYL +N I SQ +AP  PQ+N  S RRNQTLLD+
Sbjct: 340 SDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNQTLLDM 386



 Score = 25.4 bits (54), Expect(2) = 1e-06
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 1   TRYGYTNLLHHKSENILK 54
           +RYG+  L+HHKS ++ K
Sbjct: 302 SRYGHIYLIHHKSNSLEK 319


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score = 52.0 bits (123), Expect(2) = 2e-06
 Identities = 27/47 (57%), Positives = 33/47 (70%)
 Frame = +2

Query: 116 SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256
           SD GG+Y+S E  ++LKD  IV Q T PG PQ N  S RRN+TLLD+
Sbjct: 564 SDRGGEYVSQEFGNHLKDCGIVPQLTPPGTPQWNGVSERRNRTLLDM 610



 Score = 25.4 bits (54), Expect(2) = 2e-06
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 1   TRYGYTNLLHHKSENILK 54
           +RYGY  L+ HKSE+  K
Sbjct: 526 SRYGYIYLMRHKSESFEK 543


>ref|XP_004153206.1| PREDICTED: uncharacterized protein LOC101203928, partial [Cucumis
           sativus]
          Length = 486

 Score = 51.2 bits (121), Expect(2) = 3e-06
 Identities = 25/47 (53%), Positives = 32/47 (68%)
 Frame = +2

Query: 116 SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256
           SD GG+Y+     DYL +N I SQ +AP  PQ+N  S RRN+TLLD+
Sbjct: 367 SDRGGEYMDLRFQDYLIENGIKSQLSAPSTPQQNGVSERRNRTLLDM 413



 Score = 25.4 bits (54), Expect(2) = 3e-06
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 1   TRYGYTNLLHHKSENILK 54
           +RYG+  L+HHKS ++ K
Sbjct: 329 SRYGHIYLIHHKSNSLEK 346


>emb|CAE03687.2| OSJNBb0026E15.5 [Oryza sativa Japonica Group]
          Length = 448

 Score = 52.0 bits (123), Expect(2) = 3e-06
 Identities = 31/70 (44%), Positives = 39/70 (55%)
 Frame = +2

Query: 47  F*KVQRIHTXXXXXXXXFI*TL*SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS 226
           F K +  H          I  L SD GG+YL+ E  ++LK+  IV Q T PG PQ N  S
Sbjct: 120 FEKFKEFHNEVQNHLDKTIKYLRSDRGGEYLTLEFGNHLKEGGIVPQLTPPGMPQWNGVS 179

Query: 227 *RRNQTLLDV 256
            RRN+TLLD+
Sbjct: 180 ERRNRTLLDM 189



 Score = 24.6 bits (52), Expect(2) = 3e-06
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 1   TRYGYTNLLHHKSE 42
           +RYGY  L+ HKSE
Sbjct: 105 SRYGYVYLMRHKSE 118


>emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]
          Length = 923

 Score = 49.3 bits (116), Expect(2) = 4e-06
 Identities = 26/47 (55%), Positives = 32/47 (68%)
 Frame = +2

Query: 116 SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256
           SD GG+YLS E  ++LK   I  Q+T PG PQ N  S RRN+TLLD+
Sbjct: 523 SDCGGEYLSLEFGNHLKKCGIAPQFTPPGTPQWNGVSERRNRTLLDM 569



 Score = 26.9 bits (58), Expect(2) = 4e-06
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 1   TRYGYTNLLHHKSENILKSSK 63
           +RYGY  L+ HKSE+  K  K
Sbjct: 485 SRYGYVYLMRHKSESFEKFKK 505


>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
          Length = 700

 Score = 50.4 bits (119), Expect(2) = 4e-06
 Identities = 31/72 (43%), Positives = 40/72 (55%)
 Frame = +2

Query: 41  KTF*KVQRIHTXXXXXXXXFI*TL*SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENS 220
           ++F K +  H          I  L SD GG+Y S E  ++LK+  IV Q T PG PQ N 
Sbjct: 88  ESFEKFKEFHNEVQNHLDKTIKYLRSDRGGEYWSLEFGNHLKECGIVPQLTPPGTPQLNG 147

Query: 221 AS*RRNQTLLDV 256
            S RRN+TLLD+
Sbjct: 148 VSKRRNRTLLDM 159



 Score = 25.8 bits (55), Expect(2) = 4e-06
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 1   TRYGYTNLLHHKSENILK 54
           +RYGY  L+ HKSE+  K
Sbjct: 75  SRYGYVYLMRHKSESFEK 92


>gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 655

 Score = 50.4 bits (119), Expect(2) = 4e-06
 Identities = 31/72 (43%), Positives = 40/72 (55%)
 Frame = +2

Query: 41  KTF*KVQRIHTXXXXXXXXFI*TL*SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENS 220
           ++F K +  H          I  L SD GG+Y S E  ++LK+  IV Q T PG PQ N 
Sbjct: 88  ESFEKFKEFHNEVQNHLDKTIKYLRSDRGGEYWSLEFGNHLKECGIVPQLTPPGTPQLNG 147

Query: 221 AS*RRNQTLLDV 256
            S RRN+TLLD+
Sbjct: 148 VSKRRNRTLLDM 159



 Score = 25.8 bits (55), Expect(2) = 4e-06
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 1   TRYGYTNLLHHKSENILK 54
           +RYGY  L+ HKSE+  K
Sbjct: 75  SRYGYVYLMRHKSESFEK 92


>gb|ABA97705.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 810

 Score = 53.5 bits (127), Expect(2) = 5e-06
 Identities = 33/72 (45%), Positives = 40/72 (55%)
 Frame = +2

Query: 41  KTF*KVQRIHTXXXXXXXXFI*TL*SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENS 220
           +TF K +             I  L SD GGKYLS E  ++LK+  IV Q T PG PQ N 
Sbjct: 248 ETFEKFKEFQNEVQNHLGKTIKYLRSDRGGKYLSLEFGNHLKECRIVPQLTLPGTPQWNG 307

Query: 221 AS*RRNQTLLDV 256
            S RRN+TLLD+
Sbjct: 308 VSERRNRTLLDM 319



 Score = 22.3 bits (46), Expect(2) = 5e-06
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 1   TRYGYTNLLHHKSENILK 54
           +RYGY  L+  KSE   K
Sbjct: 235 SRYGYVYLMRQKSETFEK 252


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score = 49.7 bits (117), Expect(2) = 6e-06
 Identities = 31/72 (43%), Positives = 40/72 (55%)
 Frame = +2

Query: 41  KTF*KVQRIHTXXXXXXXXFI*TL*SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENS 220
           ++F K +  H          I  L SD GG+YLS E  ++LK+  IV Q T PG PQ N 
Sbjct: 515 ESFEKFKEFHNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNG 574

Query: 221 AS*RRNQTLLDV 256
            S  RN+TLLD+
Sbjct: 575 VSEWRNRTLLDM 586



 Score = 25.8 bits (55), Expect(2) = 6e-06
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 1   TRYGYTNLLHHKSENILK 54
           +RYGY  L+ HKSE+  K
Sbjct: 502 SRYGYVYLMRHKSESFEK 519


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1073

 Score = 50.8 bits (120), Expect(2) = 6e-06
 Identities = 27/47 (57%), Positives = 33/47 (70%)
 Frame = +2

Query: 116 SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256
           SD GG+YLS E  ++LK+  IV Q T PG PQ N  S RRN+TLLD+
Sbjct: 656 SDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGVSERRNRTLLDM 702



 Score = 24.6 bits (52), Expect(2) = 6e-06
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 1   TRYGYTNLLHHKSENILKSSK 63
           +R GY  L+ HKSE++ K  K
Sbjct: 618 SRCGYVYLMRHKSESVEKFKK 638


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score = 50.8 bits (120), Expect(2) = 6e-06
 Identities = 27/47 (57%), Positives = 33/47 (70%)
 Frame = +2

Query: 116 SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256
           SD GG+YLS E  ++LK+  IV Q T PG PQ N  S RRN+TLLD+
Sbjct: 656 SDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGVSERRNRTLLDM 702



 Score = 24.6 bits (52), Expect(2) = 6e-06
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 1   TRYGYTNLLHHKSENILKSSK 63
           +R GY  L+ HKSE++ K  K
Sbjct: 618 SRCGYVYLMRHKSESVEKFKK 638


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score = 52.4 bits (124), Expect(2) = 6e-06
 Identities = 27/47 (57%), Positives = 33/47 (70%)
 Frame = +2

Query: 116 SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256
           SD GG+YLS    D+L++  IVSQ T PG PQ N  S RRN+TLLD+
Sbjct: 208 SDRGGEYLSQVFSDHLRECGIVSQLTPPGTPQWNGVSERRNRTLLDM 254



 Score = 23.1 bits (48), Expect(2) = 6e-06
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 1   TRYGYTNLLHHKSEN 45
           +RYGY  L+ HKS++
Sbjct: 170 SRYGYVYLMKHKSKS 184


>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77550379|gb|ABA93176.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 938

 Score = 50.8 bits (120), Expect(2) = 6e-06
 Identities = 27/47 (57%), Positives = 33/47 (70%)
 Frame = +2

Query: 116 SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256
           SD GG+YLS E  ++LK+  IV Q T PG PQ N  S RRN+TLLD+
Sbjct: 449 SDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGVSERRNRTLLDM 495



 Score = 24.6 bits (52), Expect(2) = 6e-06
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 1   TRYGYTNLLHHKSENILK 54
           +RYGY  L+ HKS++  K
Sbjct: 411 SRYGYVYLMRHKSDSFEK 428


>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
          Length = 1544

 Score = 53.9 bits (128), Expect(2) = 1e-05
 Identities = 25/53 (47%), Positives = 38/53 (71%)
 Frame = +2

Query: 98   FI*TL*SD*GGKYLSSEILDYLKDNEIVSQWTAPGKPQENSAS*RRNQTLLDV 256
            +I TL SD GG+Y+S E + +L +  I SQ +APG PQ+N  + RRN+TL+++
Sbjct: 882  YIKTLRSDHGGEYISREFITFLSEQGITSQLSAPGMPQQNGVAERRNRTLMEM 934



 Score = 20.8 bits (42), Expect(2) = 1e-05
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 1   TRYGYTNLLHHKSE 42
           +RYGY  LL  KSE
Sbjct: 850 SRYGYIYLLCRKSE 863


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