BLASTX nr result

ID: Akebia25_contig00051653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00051653
         (229 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC10733.1| hypothetical protein L484_025317 [Morus notabilis]      74   3e-11
emb|CBI16054.3| unnamed protein product [Vitis vinifera]               72   8e-11
ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
ref|XP_006427693.1| hypothetical protein CICLE_v10025096mg [Citr...    69   7e-10
ref|XP_007016304.1| Tetratricopeptide repeat (TPR)-like superfam...    68   1e-09
ref|XP_006493448.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09
ref|XP_002520500.1| pentatricopeptide repeat-containing protein,...    64   2e-08
ref|XP_002313416.2| chlororespiratory reduction 2 family protein...    63   4e-08
ref|XP_004491940.1| PREDICTED: pentatricopeptide repeat-containi...    63   4e-08
ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containi...    63   5e-08
ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containi...    62   8e-08
ref|XP_006353232.1| PREDICTED: pentatricopeptide repeat-containi...    61   2e-07
ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07
ref|XP_006418855.1| hypothetical protein EUTSA_v10002433mg [Eutr...    59   7e-07
ref|XP_004250510.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_006290707.1| hypothetical protein CARUB_v10016805mg [Caps...    58   1e-06
ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arab...    57   2e-06
ref|XP_004307227.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|NP_190263.1| protein CHLORORESPIRATORY REDUCTION 2 [Arabidop...    57   4e-06

>gb|EXC10733.1| hypothetical protein L484_025317 [Morus notabilis]
          Length = 659

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 36/62 (58%), Positives = 47/62 (75%)
 Frame = -2

Query: 186 KHSHKTPLSFRQTSITSSLRTNSQRLNNNQLIQSLCKQGNLKQALQILPNEPNPTQHTYE 7
           ++S K P+S    +I  S+ T     + N+LIQSLCKQGNL+QAL++LP+EPNPTQHTYE
Sbjct: 25  RNSPKPPIS--SITIKPSISTTKDTNDKNKLIQSLCKQGNLRQALKLLPHEPNPTQHTYE 82

Query: 6   LL 1
           LL
Sbjct: 83  LL 84


>emb|CBI16054.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 33/47 (70%), Positives = 38/47 (80%)
 Frame = -2

Query: 141 TSSLRTNSQRLNNNQLIQSLCKQGNLKQALQILPNEPNPTQHTYELL 1
           +++ R+N    NNN LIQSLCKQGNL QALQ+L  EPNPTQHTYELL
Sbjct: 38  STTTRSNGDSNNNNPLIQSLCKQGNLNQALQVLSQEPNPTQHTYELL 84


>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 33/47 (70%), Positives = 38/47 (80%)
 Frame = -2

Query: 141 TSSLRTNSQRLNNNQLIQSLCKQGNLKQALQILPNEPNPTQHTYELL 1
           +++ R+N    NNN LIQSLCKQGNL QALQ+L  EPNPTQHTYELL
Sbjct: 38  STTTRSNGDSNNNNPLIQSLCKQGNLNQALQVLSQEPNPTQHTYELL 84


>ref|XP_006427693.1| hypothetical protein CICLE_v10025096mg [Citrus clementina]
           gi|557529683|gb|ESR40933.1| hypothetical protein
           CICLE_v10025096mg [Citrus clementina]
          Length = 662

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 32/47 (68%), Positives = 38/47 (80%)
 Frame = -2

Query: 141 TSSLRTNSQRLNNNQLIQSLCKQGNLKQALQILPNEPNPTQHTYELL 1
           +S+  T+    N N+LIQSLCKQGNLKQAL +L +EPNPTQHTYELL
Sbjct: 40  SSTTPTSLSSRNKNELIQSLCKQGNLKQALDVLSSEPNPTQHTYELL 86


>ref|XP_007016304.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao] gi|508786667|gb|EOY33923.1| Tetratricopeptide
           repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 651

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 32/58 (55%), Positives = 42/58 (72%)
 Frame = -2

Query: 174 KTPLSFRQTSITSSLRTNSQRLNNNQLIQSLCKQGNLKQALQILPNEPNPTQHTYELL 1
           +T      +S+T +   ++  LNNNQLIQSLCK+GNLKQA ++L  EPNP+Q TYELL
Sbjct: 20  RTSPKLPSSSLTLNPSISTSNLNNNQLIQSLCKEGNLKQAFKLLSQEPNPSQRTYELL 77


>ref|XP_006493448.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Citrus sinensis]
          Length = 662

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 31/47 (65%), Positives = 37/47 (78%)
 Frame = -2

Query: 141 TSSLRTNSQRLNNNQLIQSLCKQGNLKQALQILPNEPNPTQHTYELL 1
           +S+  T+    N N+LIQSLCKQGNL+QAL +L  EPNPTQHTYELL
Sbjct: 40  SSTTPTSLSSRNKNELIQSLCKQGNLRQALDVLSIEPNPTQHTYELL 86


>ref|XP_002520500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540342|gb|EEF41913.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 414

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 29/36 (80%), Positives = 33/36 (91%)
 Frame = -2

Query: 108 NNNQLIQSLCKQGNLKQALQILPNEPNPTQHTYELL 1
           N+N+LIQSLCKQGNLKQAL +L NEP+P QHTYELL
Sbjct: 42  NSNKLIQSLCKQGNLKQALNLLCNEPDPAQHTYELL 77


>ref|XP_002313416.2| chlororespiratory reduction 2 family protein [Populus trichocarpa]
           gi|550331005|gb|EEE87371.2| chlororespiratory reduction
           2 family protein [Populus trichocarpa]
          Length = 650

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = -2

Query: 135 SLRTNSQRLNNNQLIQSLCKQGNLKQALQILPNEPNPTQHTYELL 1
           +L   +   +NN+LIQSLCKQGNL QAL++L  EPNP QHTYELL
Sbjct: 32  TLNPTASTADNNKLIQSLCKQGNLTQALELLSLEPNPAQHTYELL 76


>ref|XP_004491940.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cicer arietinum]
          Length = 661

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
 Frame = -2

Query: 180 SHKTPLSFRQTSITSSLR-TNSQRLNNNQLIQSLCKQGNLKQALQILPNEPNPTQHTYEL 4
           S + P+ F   + +SS   TN    NNN LIQSLC+ GNLKQA+Q+L  EPNPTQ T+E+
Sbjct: 27  SSRLPVCFVSLNPSSSTNPTNDITNNNNDLIQSLCRGGNLKQAIQVLCTEPNPTQKTFEV 86

Query: 3   L 1
           L
Sbjct: 87  L 87


>ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/60 (56%), Positives = 42/60 (70%)
 Frame = -2

Query: 180 SHKTPLSFRQTSITSSLRTNSQRLNNNQLIQSLCKQGNLKQALQILPNEPNPTQHTYELL 1
           S + P+SF   + +++L  N    NNNQLIQSLCK GNLKQAL +L  EPNPTQ T+E L
Sbjct: 26  SSRVPVSFVSLNPSANL-INDINSNNNQLIQSLCKGGNLKQALHLLCCEPNPTQQTFEHL 84


>ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/60 (55%), Positives = 43/60 (71%)
 Frame = -2

Query: 180 SHKTPLSFRQTSITSSLRTNSQRLNNNQLIQSLCKQGNLKQALQILPNEPNPTQHTYELL 1
           S + P+SF   + +++L  N  + NNNQLIQSLCK GNLKQA+ +L  EPNPTQ T+E L
Sbjct: 26  SSRVPVSFVSLNPSANLM-NDIKGNNNQLIQSLCKGGNLKQAIHLLCCEPNPTQRTFEHL 84


>ref|XP_006353232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Solanum tuberosum]
          Length = 653

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/55 (52%), Positives = 37/55 (67%)
 Frame = -2

Query: 165 LSFRQTSITSSLRTNSQRLNNNQLIQSLCKQGNLKQALQILPNEPNPTQHTYELL 1
           ++F  ++  S    +  R N N  IQS CK+G LK+ALQ+L  EPNPTQHTYELL
Sbjct: 31  IAFGHSTGNSKSINSISRCNYNDSIQSFCKKGQLKEALQLLSQEPNPTQHTYELL 85


>ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449474033|ref|XP_004154055.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449510921|ref|XP_004163811.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/55 (61%), Positives = 36/55 (65%)
 Frame = -2

Query: 165 LSFRQTSITSSLRTNSQRLNNNQLIQSLCKQGNLKQALQILPNEPNPTQHTYELL 1
           LS    S   S   NS   NNN LIQSLCKQGNLKQAL +L +E NPTQ T ELL
Sbjct: 24  LSVSSFSFNPSTPPNS---NNNHLIQSLCKQGNLKQALYLLSHESNPTQQTCELL 75


>ref|XP_006418855.1| hypothetical protein EUTSA_v10002433mg [Eutrema salsugineum]
           gi|557096783|gb|ESQ37291.1| hypothetical protein
           EUTSA_v10002433mg [Eutrema salsugineum]
          Length = 659

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 26/42 (61%), Positives = 35/42 (83%)
 Frame = -2

Query: 126 TNSQRLNNNQLIQSLCKQGNLKQALQILPNEPNPTQHTYELL 1
           ++  + +NNQLIQSLCK+GNLKQAL++L  E +P+Q TYELL
Sbjct: 43  SDGAKASNNQLIQSLCKEGNLKQALRVLSQESSPSQQTYELL 84


>ref|XP_004250510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Solanum lycopersicum]
          Length = 652

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/38 (71%), Positives = 29/38 (76%)
 Frame = -2

Query: 114 RLNNNQLIQSLCKQGNLKQALQILPNEPNPTQHTYELL 1
           R N N  IQS CK+G LKQALQ+L  EPNP QHTYELL
Sbjct: 47  RCNYNDSIQSYCKKGELKQALQLLSQEPNPNQHTYELL 84


>ref|XP_006290707.1| hypothetical protein CARUB_v10016805mg [Capsella rubella]
           gi|482559414|gb|EOA23605.1| hypothetical protein
           CARUB_v10016805mg [Capsella rubella]
          Length = 657

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/58 (50%), Positives = 39/58 (67%)
 Frame = -2

Query: 174 KTPLSFRQTSITSSLRTNSQRLNNNQLIQSLCKQGNLKQALQILPNEPNPTQHTYELL 1
           K PL     +  S   +   +++NNQLIQSLCK+G LKQAL++L  E +P+Q TYELL
Sbjct: 26  KPPLCSVALNNPSIAASAGAKISNNQLIQSLCKEGKLKQALRVLSQESSPSQQTYELL 83


>ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata] gi|297323351|gb|EFH53772.1| hypothetical protein
           ARALYDRAFT_905886 [Arabidopsis lyrata subsp. lyrata]
          Length = 657

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/38 (65%), Positives = 33/38 (86%)
 Frame = -2

Query: 114 RLNNNQLIQSLCKQGNLKQALQILPNEPNPTQHTYELL 1
           +++NNQLIQSLCK+G LKQAL++L  E +P+Q TYELL
Sbjct: 46  KISNNQLIQSLCKEGKLKQALRVLSQESSPSQQTYELL 83


>ref|XP_004307227.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 776

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = -2

Query: 108 NNNQLIQSLCKQGNLKQALQILPNEPNPTQHTYELL 1
           N NQLIQSLC QG+LK ALQ+ P+EPNP+Q T ELL
Sbjct: 167 NKNQLIQSLCNQGDLKLALQLFPHEPNPSQQTCELL 202


>ref|NP_190263.1| protein CHLORORESPIRATORY REDUCTION 2 [Arabidopsis thaliana]
           gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g46790, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
           gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis
           thaliana] gi|110741961|dbj|BAE98921.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332644684|gb|AEE78205.1| protein chlororespiratory
           reduction 2 [Arabidopsis thaliana]
          Length = 657

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 24/38 (63%), Positives = 33/38 (86%)
 Frame = -2

Query: 114 RLNNNQLIQSLCKQGNLKQALQILPNEPNPTQHTYELL 1
           +++NNQLIQSLCK+G LKQA+++L  E +P+Q TYELL
Sbjct: 46  KISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELL 83


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