BLASTX nr result

ID: Akebia25_contig00051268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00051268
         (333 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL78659.1|AF405557_1 reverse transcriptase [Fagus sylvatica]       38   9e-06

>gb|AAL78659.1|AF405557_1 reverse transcriptase [Fagus sylvatica]
          Length = 168

 Score = 38.1 bits (87), Expect(2) = 9e-06
 Identities = 20/53 (37%), Positives = 28/53 (52%)
 Frame = -3

Query: 160 DWGFLDYLLGGMGFWEKYK*WNQTIFLVIFSPIMVNGFIIG*FKSSGDLRQGD 2
           +W  L ++L  MGF  K+  W +     +   ++VNG   G F SS  LRQGD
Sbjct: 79  NWDCLFFILDRMGFGRKWVCWMKACVSTVRYSVIVNGSPTGFFDSSRGLRQGD 131



 Score = 37.0 bits (84), Expect(2) = 9e-06
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -2

Query: 269 DELLITNKCMDSRRKYMFLRAVCKIGMEKTYHYRKW 162
           D +LI N+C+DSR K      +CK+ +EK Y +  W
Sbjct: 45  DSVLIANECLDSRIKSGIPGLICKLDIEKAYDHVNW 80


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