BLASTX nr result

ID: Akebia25_contig00050960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00050960
         (436 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein A...    44   7e-06

>ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 217

 Score = 43.9 bits (102), Expect(2) = 7e-06
 Identities = 18/63 (28%), Positives = 34/63 (53%)
 Frame = +2

Query: 14  ENFDHILIHCVFSRKIWSSFFLRFRAVGCVPSSVLGLLQCWQEWGSSFWGAKRVLWSLLP 193
           E  +H+ +HC ++ ++W  F  + +     P S++ +LQCW   G++    KR  W ++P
Sbjct: 104 ETVNHLFLHCKWTDQLWQMFIQKRKIKWTKPGSIIEVLQCWNRDGNAGKNEKR--WRIVP 161

Query: 194 FAI 202
             I
Sbjct: 162 ACI 164



 Score = 31.6 bits (70), Expect(2) = 7e-06
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = +3

Query: 207 WVLWNEQNSRCFDDKGAQXXXXXXXXXXXXFFWSK 311
           W +W E+N RCF+ K               +FW K
Sbjct: 166 WTIWKERNQRCFEGKQNNIQKIKTNCLGLYYFWCK 200


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