BLASTX nr result
ID: Akebia25_contig00049973
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00049973
(417 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007028824.1| Mitochondrial RNAediting factor 1 [Theobroma... 108 1e-21
ref|XP_006493918.1| PREDICTED: putative pentatricopeptide repeat... 104 1e-20
ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 96 4e-18
ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat... 96 4e-18
ref|XP_006349560.1| PREDICTED: putative pentatricopeptide repeat... 95 9e-18
ref|XP_004234835.1| PREDICTED: putative pentatricopeptide repeat... 95 1e-17
gb|EXB53136.1| hypothetical protein L484_006956 [Morus notabilis] 94 2e-17
ref|XP_003625160.1| Pentatricopeptide repeat-containing protein ... 87 2e-15
gb|EYU18757.1| hypothetical protein MIMGU_mgv1a021536mg, partial... 85 9e-15
ref|XP_004301443.1| PREDICTED: putative pentatricopeptide repeat... 85 9e-15
ref|XP_004493520.1| PREDICTED: putative pentatricopeptide repeat... 82 6e-14
ref|XP_002322703.2| hypothetical protein POPTR_0016s05390g [Popu... 81 1e-13
ref|XP_002864185.1| pentatricopeptide repeat-containing protein ... 71 1e-10
ref|XP_006280222.1| hypothetical protein CARUB_v10026131mg [Caps... 70 3e-10
ref|NP_200075.1| pentatricopeptide repeat protein MEF1 [Arabidop... 70 4e-10
ref|XP_007162241.1| hypothetical protein PHAVU_001G135800g [Phas... 67 3e-09
gb|EPS65002.1| hypothetical protein M569_09774, partial [Genlise... 67 3e-09
ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat... 64 2e-08
>ref|XP_007028824.1| Mitochondrial RNAediting factor 1 [Theobroma cacao]
gi|508717429|gb|EOY09326.1| Mitochondrial RNAediting
factor 1 [Theobroma cacao]
Length = 595
Score = 108 bits (269), Expect = 1e-21
Identities = 49/67 (73%), Positives = 60/67 (89%)
Frame = -2
Query: 203 QNPLIPSSFEQNYRNICNLILSFTHARSLPKGQRLHAHVIKSGVQTIPLLSNHLINFYSK 24
QNPL +SFEQNYRNICN++LS TH+RSLPKG +LHAH+IK+G+QTIPL+S+HL+NFYSK
Sbjct: 10 QNPLNQNSFEQNYRNICNVLLSLTHSRSLPKGLQLHAHIIKAGLQTIPLISHHLLNFYSK 69
Query: 23 CQRPLDS 3
Q PL S
Sbjct: 70 TQLPLFS 76
>ref|XP_006493918.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Citrus sinensis]
Length = 610
Score = 104 bits (259), Expect = 1e-20
Identities = 55/96 (57%), Positives = 68/96 (70%)
Frame = -2
Query: 296 LLQIPKRTLQTPINLTISKTPTSPNNLTNFSQNPLIPSSFEQNYRNICNLILSFTHARSL 117
+LQ+ L +P S +P PN+ QNPL SSFE YR IC L+LS T+AR+L
Sbjct: 1 MLQVAAEPLPSP-----SPSPHIPNH--KIPQNPLNQSSFELTYREICTLLLSLTYARNL 53
Query: 116 PKGQRLHAHVIKSGVQTIPLLSNHLINFYSKCQRPL 9
KG +LHAH+IKSG+QTIPL+S+HLINFYSK QRPL
Sbjct: 54 TKGLQLHAHIIKSGLQTIPLVSHHLINFYSKTQRPL 89
>ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 96.3 bits (238), Expect = 4e-18
Identities = 46/68 (67%), Positives = 57/68 (83%)
Frame = -2
Query: 206 SQNPLIPSSFEQNYRNICNLILSFTHARSLPKGQRLHAHVIKSGVQTIPLLSNHLINFYS 27
SQNPL +SFEQNYR ICNL+LSFT +RSL +G +LHAH++K G+QTIPL+S++LIN YS
Sbjct: 12 SQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYS 71
Query: 26 KCQRPLDS 3
K Q PL S
Sbjct: 72 KTQLPLFS 79
>ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 96.3 bits (238), Expect = 4e-18
Identities = 46/68 (67%), Positives = 57/68 (83%)
Frame = -2
Query: 206 SQNPLIPSSFEQNYRNICNLILSFTHARSLPKGQRLHAHVIKSGVQTIPLLSNHLINFYS 27
SQNPL +SFEQNYR ICNL+LSFT +RSL +G +LHAH++K G+QTIPL+S++LIN YS
Sbjct: 12 SQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYS 71
Query: 26 KCQRPLDS 3
K Q PL S
Sbjct: 72 KTQLPLFS 79
>ref|XP_006349560.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Solanum tuberosum]
Length = 596
Score = 95.1 bits (235), Expect = 9e-18
Identities = 48/75 (64%), Positives = 55/75 (73%)
Frame = -2
Query: 227 PNNLTNFSQNPLIPSSFEQNYRNICNLILSFTHARSLPKGQRLHAHVIKSGVQTIPLLSN 48
P T FSQ SF NYR ICN +LS T +RSLPKG LHAH+IKSG+Q IPL+S+
Sbjct: 9 PLQQTTFSQ------SFNLNYRAICNNLLSLTQSRSLPKGLALHAHIIKSGIQIIPLVSH 62
Query: 47 HLINFYSKCQRPLDS 3
HLINFYSK QRP+DS
Sbjct: 63 HLINFYSKLQRPIDS 77
>ref|XP_004234835.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Solanum lycopersicum]
Length = 596
Score = 94.7 bits (234), Expect = 1e-17
Identities = 48/75 (64%), Positives = 55/75 (73%)
Frame = -2
Query: 227 PNNLTNFSQNPLIPSSFEQNYRNICNLILSFTHARSLPKGQRLHAHVIKSGVQTIPLLSN 48
P T FSQ SF NYR ICN +LS T +RSLPKG LHAH+IKSG+Q IPL+S+
Sbjct: 9 PLQETTFSQ------SFNLNYRAICNNLLSLTQSRSLPKGLALHAHIIKSGIQIIPLVSH 62
Query: 47 HLINFYSKCQRPLDS 3
HLINFYSK QRP+DS
Sbjct: 63 HLINFYSKLQRPIDS 77
>gb|EXB53136.1| hypothetical protein L484_006956 [Morus notabilis]
Length = 616
Score = 94.0 bits (232), Expect = 2e-17
Identities = 50/99 (50%), Positives = 67/99 (67%)
Frame = -2
Query: 299 MLLQIPKRTLQTPINLTISKTPTSPNNLTNFSQNPLIPSSFEQNYRNICNLILSFTHARS 120
ML Q+PKR Q P T++ T P F+ L+ ++Y+ IC+L+LS T +RS
Sbjct: 1 MLHQLPKRRFQLPPPPTVTPTIPKPPLNPPFNHKTLVEPI--KDYKQICDLLLSQTRSRS 58
Query: 119 LPKGQRLHAHVIKSGVQTIPLLSNHLINFYSKCQRPLDS 3
LPKG +LHA +IKSG+Q+IPL+S+HLINFYSK Q PL S
Sbjct: 59 LPKGLQLHAQIIKSGIQSIPLVSHHLINFYSKTQFPLHS 97
>ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360204|gb|ABN08217.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355500175|gb|AES81378.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 596
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/65 (64%), Positives = 50/65 (76%), Gaps = 2/65 (3%)
Frame = -2
Query: 191 IPSSFEQN--YRNICNLILSFTHARSLPKGQRLHAHVIKSGVQTIPLLSNHLINFYSKCQ 18
+P SF Q YRN+CN +LS T +RSLPKG +LHAH+IK G+QTIPLLS+HLINFYSK
Sbjct: 10 LPHSFNQQPLYRNLCNTLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTH 69
Query: 17 RPLDS 3
P S
Sbjct: 70 LPYSS 74
>gb|EYU18757.1| hypothetical protein MIMGU_mgv1a021536mg, partial [Mimulus
guttatus]
Length = 589
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/66 (60%), Positives = 48/66 (72%)
Frame = -2
Query: 209 FSQNPLIPSSFEQNYRNICNLILSFTHARSLPKGQRLHAHVIKSGVQTIPLLSNHLINFY 30
F N L SFE NYR ICN ++ FT ++L +GQ HAHVIKSG+QTIPL+ +HLINFY
Sbjct: 1 FPHNSLNQQSFELNYRCICNHLIEFTRGKNLLRGQSFHAHVIKSGLQTIPLICHHLINFY 60
Query: 29 SKCQRP 12
SK Q P
Sbjct: 61 SKVQLP 66
>ref|XP_004301443.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Fragaria vesca subsp. vesca]
Length = 590
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/53 (75%), Positives = 48/53 (90%)
Frame = -2
Query: 161 NICNLILSFTHARSLPKGQRLHAHVIKSGVQTIPLLSNHLINFYSKCQRPLDS 3
+ICNL+LS THAR+LPKG +LHAHVIKSG+Q+IPL+S+HLINFYSK Q PL S
Sbjct: 19 HICNLLLSLTHARALPKGLQLHAHVIKSGLQSIPLVSHHLINFYSKNQLPLFS 71
>ref|XP_004493520.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cicer arietinum]
Length = 594
Score = 82.4 bits (202), Expect = 6e-14
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = -2
Query: 167 YRNICNLILSFTHARSLPKGQRLHAHVIKSGVQTIPLLSNHLINFYSKCQRPLDS 3
YR ICN +LS T++RSLPKG +LHAH++K G+QTIPLLS+HLINFYSK P S
Sbjct: 19 YRKICNTLLSLTYSRSLPKGLQLHAHILKLGLQTIPLLSHHLINFYSKTHLPYSS 73
>ref|XP_002322703.2| hypothetical protein POPTR_0016s05390g [Populus trichocarpa]
gi|550320891|gb|EEF04464.2| hypothetical protein
POPTR_0016s05390g [Populus trichocarpa]
Length = 627
Score = 81.3 bits (199), Expect = 1e-13
Identities = 50/106 (47%), Positives = 66/106 (62%), Gaps = 9/106 (8%)
Frame = -2
Query: 299 MLLQIPKRTLQTPIN--LTISKTPTSPNNLTNFSQNPLI-----PSSF--EQNYRNICNL 147
ML PKR L P+ LT S+ + SQ I P+ F E+ Y +IC+L
Sbjct: 1 MLQHGPKRPLYVPLQNILTKSQHQNPIIKTQSLSQEGTITPQNSPNRFCSEKKYGHICDL 60
Query: 146 ILSFTHARSLPKGQRLHAHVIKSGVQTIPLLSNHLINFYSKCQRPL 9
+LS T +RSL KGQ++HAH+IKSG+Q IPL+ ++LINFYSK Q PL
Sbjct: 61 LLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPL 106
>ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297310020|gb|EFH40444.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 588
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/56 (55%), Positives = 43/56 (76%)
Frame = -2
Query: 170 NYRNICNLILSFTHARSLPKGQRLHAHVIKSGVQTIPLLSNHLINFYSKCQRPLDS 3
NY IC+L+LS +RS+ KG +LH +++KSG+ IPL++N+LINFYSK Q P DS
Sbjct: 14 NYNQICDLLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDS 69
>ref|XP_006280222.1| hypothetical protein CARUB_v10026131mg [Capsella rubella]
gi|482548926|gb|EOA13120.1| hypothetical protein
CARUB_v10026131mg [Capsella rubella]
Length = 588
Score = 70.1 bits (170), Expect = 3e-10
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = -2
Query: 170 NYRNICNLILSFTHARSLPKGQRLHAHVIKSGVQTIPLLSNHLINFYSKCQRPLDS 3
NY IC+L+LS RS KG +LH +V+KSG+ IPL++N+LINFYSK Q P DS
Sbjct: 14 NYNQICDLLLSSARTRSTVKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDS 69
>ref|NP_200075.1| pentatricopeptide repeat protein MEF1 [Arabidopsis thaliana]
gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At5g52630 gi|8953718|dbj|BAA98081.1|
selenium-binding protein-like [Arabidopsis thaliana]
gi|332008860|gb|AED96243.1| pentatricopeptide repeat
protein MEF1 [Arabidopsis thaliana]
Length = 588
Score = 69.7 bits (169), Expect = 4e-10
Identities = 32/56 (57%), Positives = 41/56 (73%)
Frame = -2
Query: 170 NYRNICNLILSFTHARSLPKGQRLHAHVIKSGVQTIPLLSNHLINFYSKCQRPLDS 3
NY IC+L+LS RS KG +LH +V+KSG+ IPL++N+LINFYSK Q P DS
Sbjct: 14 NYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDS 69
>ref|XP_007162241.1| hypothetical protein PHAVU_001G135800g [Phaseolus vulgaris]
gi|561035705|gb|ESW34235.1| hypothetical protein
PHAVU_001G135800g [Phaseolus vulgaris]
Length = 583
Score = 67.0 bits (162), Expect = 3e-09
Identities = 29/58 (50%), Positives = 42/58 (72%)
Frame = -2
Query: 176 EQNYRNICNLILSFTHARSLPKGQRLHAHVIKSGVQTIPLLSNHLINFYSKCQRPLDS 3
+ + R+IC +++ TH+RSLPKG +LHA+VIK G + +PL+ +H INFYSK P S
Sbjct: 5 QSDCRDICKVLVCLTHSRSLPKGLQLHAYVIKLGFEALPLVCHHFINFYSKTNLPHSS 62
>gb|EPS65002.1| hypothetical protein M569_09774, partial [Genlisea aurea]
Length = 575
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/60 (51%), Positives = 41/60 (68%)
Frame = -2
Query: 182 SFEQNYRNICNLILSFTHARSLPKGQRLHAHVIKSGVQTIPLLSNHLINFYSKCQRPLDS 3
+FE N R ICN ++ R+L +GQ LH HV+KSG+Q IP + +HLINFYSK + P S
Sbjct: 8 NFESNCRLICNDLVDCISRRNLRRGQSLHGHVVKSGIQLIPQVCHHLINFYSKVELPYRS 67
>ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/54 (55%), Positives = 38/54 (70%)
Frame = -2
Query: 164 RNICNLILSFTHARSLPKGQRLHAHVIKSGVQTIPLLSNHLINFYSKCQRPLDS 3
R+IC +++ FTH RSL KG +LH VIK G + IPL+ +HLINFYSK P S
Sbjct: 8 RDICKVLVWFTHTRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSS 61