BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00049413
         (308 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007008889.1| Ankyrin repeat family protein, putative isof...   116   3e-24
ref|XP_007008888.1| Ankyrin repeat family protein, putative isof...   116   3e-24
ref|XP_002520772.1| ankyrin repeat-containing protein, putative ...   116   3e-24
ref|XP_002273407.1| PREDICTED: ankyrin-3-like [Vitis vinifera]        113   2e-23
emb|CAN73340.1| hypothetical protein VITISV_042402 [Vitis vinifera]   113   2e-23
ref|XP_002316195.2| hypothetical protein POPTR_0010s19260g [Popu...   109   3e-22
gb|EYU20052.1| hypothetical protein MIMGU_mgv1a006127mg [Mimulus...   105   5e-21
gb|EXB29253.1| Serine/threonine-protein phosphatase 6 regulatory...   104   1e-20
ref|XP_006356470.1| PREDICTED: ankyrin-2-like [Solanum tuberosum]     104   1e-20
ref|XP_006435797.1| hypothetical protein CICLE_v10031427mg [Citr...   104   1e-20
ref|XP_006435796.1| hypothetical protein CICLE_v10031427mg [Citr...   104   1e-20
ref|XP_006435795.1| hypothetical protein CICLE_v10031427mg [Citr...   104   1e-20
ref|XP_004235236.1| PREDICTED: ankyrin-2-like [Solanum lycopersi...    97   2e-18
pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With...    80   2e-13
pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal...    80   2e-13
ref|XP_004994677.1| hypothetical protein PTSG_04582 [Salpingoeca...    80   3e-13
pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal...    80   3e-13
pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Nor...    79   5e-13
pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Nor...    79   5e-13
pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Nor...    79   7e-13

>ref|XP_007008889.1| Ankyrin repeat family protein, putative isoform 2 [Theobroma cacao]
           gi|508725802|gb|EOY17699.1| Ankyrin repeat family
           protein, putative isoform 2 [Theobroma cacao]
          Length = 440

 Score =  116 bits (291), Expect = 3e-24
 Identities = 58/89 (65%), Positives = 71/89 (79%)
 Frame = +2

Query: 38  RGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQM 217
           R EPLD RDKEGRTPLHLAAS+GN+ CAK+L+++G D NAK  D RTAL+RAAANGNR+M
Sbjct: 239 RREPLDWRDKEGRTPLHLAASKGNIECAKILVESGVDKNAKSKDGRTALFRAAANGNRRM 298

Query: 218 VEFLMEMGADPTICIAVTGQSPLDVAMEK 304
           VE L+E+ ADPTI     G+S  D+A +K
Sbjct: 299 VEMLIELDADPTI-PDDRGRSAFDIARDK 326


>ref|XP_007008888.1| Ankyrin repeat family protein, putative isoform 1 [Theobroma cacao]
           gi|508725801|gb|EOY17698.1| Ankyrin repeat family
           protein, putative isoform 1 [Theobroma cacao]
          Length = 478

 Score =  116 bits (291), Expect = 3e-24
 Identities = 58/89 (65%), Positives = 71/89 (79%)
 Frame = +2

Query: 38  RGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQM 217
           R EPLD RDKEGRTPLHLAAS+GN+ CAK+L+++G D NAK  D RTAL+RAAANGNR+M
Sbjct: 239 RREPLDWRDKEGRTPLHLAASKGNIECAKILVESGVDKNAKSKDGRTALFRAAANGNRRM 298

Query: 218 VEFLMEMGADPTICIAVTGQSPLDVAMEK 304
           VE L+E+ ADPTI     G+S  D+A +K
Sbjct: 299 VEMLIELDADPTI-PDDRGRSAFDIARDK 326


>ref|XP_002520772.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223539903|gb|EEF41481.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 469

 Score =  116 bits (291), Expect = 3e-24
 Identities = 58/86 (67%), Positives = 70/86 (81%)
 Frame = +2

Query: 47  PLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQMVEF 226
           PLD RD+EGRTPLHLAAS GN+RCAKVL+++GAD +A+  D RT LYRAAANG+R+MVE 
Sbjct: 240 PLDLRDREGRTPLHLAASRGNIRCAKVLVESGADKDARSKDGRTVLYRAAANGDRRMVEM 299

Query: 227 LMEMGADPTICIAVTGQSPLDVAMEK 304
           L+EMGADPTI     G+S  DVA +K
Sbjct: 300 LIEMGADPTIA-DDRGRSAFDVARDK 324



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/77 (40%), Positives = 47/77 (61%)
 Frame = +2

Query: 14  RLIEEACERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRA 193
           +++    E G  ++C+D EG +P+HLA   G+L   +VL+  GA++NAK     T LY A
Sbjct: 382 KIVAMLVEIGVDVECQDNEGHSPIHLAVEGGSLETVEVLVNKGANINAKSSQGATPLYLA 441

Query: 194 AANGNRQMVEFLMEMGA 244
            A G R++ EFL+  GA
Sbjct: 442 KAIGYREISEFLINRGA 458


>ref|XP_002273407.1| PREDICTED: ankyrin-3-like [Vitis vinifera]
          Length = 470

 Score =  113 bits (283), Expect = 2e-23
 Identities = 53/86 (61%), Positives = 68/86 (79%)
 Frame = +2

Query: 47  PLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQMVEF 226
           PLD RD EGRT LHLA S+GN++CA+ L++AGAD +AK  D RTALYRAA+NG+R M E 
Sbjct: 237 PLDFRDNEGRTALHLAVSKGNIQCARTLVEAGADKDAKSKDGRTALYRAASNGDRPMAEM 296

Query: 227 LMEMGADPTICIAVTGQSPLDVAMEK 304
           L+++GADPTI     G+SPLD+A +K
Sbjct: 297 LIQIGADPTITAGHRGRSPLDIARDK 322



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/68 (41%), Positives = 40/68 (58%)
 Frame = +2

Query: 41  GEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQMV 220
           G  L+C+D EG  PLHLA   G++   +VL+  GA++NA+     T LY A A G   + 
Sbjct: 389 GLGLECQDSEGHAPLHLAVEGGSMETVEVLVDEGANINARSKRGATPLYMANALGYHDIA 448

Query: 221 EFLMEMGA 244
           +FL+  GA
Sbjct: 449 QFLVNRGA 456


>emb|CAN73340.1| hypothetical protein VITISV_042402 [Vitis vinifera]
          Length = 989

 Score =  113 bits (283), Expect = 2e-23
 Identities = 53/86 (61%), Positives = 68/86 (79%)
 Frame = +2

Query: 47  PLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQMVEF 226
           PLD RD EGRT LHLA S+GN++CA+ L++AGAD +AK  D RTALYRAA+NG+R M E 
Sbjct: 237 PLDFRDNEGRTALHLAVSKGNIQCARTLVEAGADKDAKSKDGRTALYRAASNGDRPMAEM 296

Query: 227 LMEMGADPTICIAVTGQSPLDVAMEK 304
           L+++GADPTI     G+SPLD+A +K
Sbjct: 297 LIQIGADPTITAGHRGRSPLDIARDK 322



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/63 (41%), Positives = 37/63 (58%)
 Frame = +2

Query: 41  GEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQMV 220
           G  L+C+D EG  PLHLA   G++   +VL+  GA++NA+     T LY A A G   + 
Sbjct: 389 GLGLECQDSEGHAPLHLAVEGGSMETVEVLVDEGANINARSKRGATPLYMANALGYHDIA 448

Query: 221 EFL 229
           +FL
Sbjct: 449 QFL 451


>ref|XP_002316195.2| hypothetical protein POPTR_0010s19260g [Populus trichocarpa]
           gi|550330147|gb|EEF02366.2| hypothetical protein
           POPTR_0010s19260g [Populus trichocarpa]
          Length = 480

 Score =  109 bits (273), Expect = 3e-22
 Identities = 54/86 (62%), Positives = 70/86 (81%)
 Frame = +2

Query: 47  PLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQMVEF 226
           PLD RDKEGRTPLHLA+S GN++CAK+L+++ AD +AK  D RTALYRAAANG+R+MVE 
Sbjct: 240 PLDLRDKEGRTPLHLASSRGNIKCAKLLVESDADKDAKSKDGRTALYRAAANGDRRMVEM 299

Query: 227 LMEMGADPTICIAVTGQSPLDVAMEK 304
           L+++GADPTI     G+S +D A +K
Sbjct: 300 LIDVGADPTI-PDDRGRSAMDAARDK 324



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/90 (36%), Positives = 51/90 (56%)
 Frame = +2

Query: 11  TRLIEEACERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYR 190
           T ++    E G  L+C+D EG  PLHLA   G++   +VLI  GA+VNA+ +   T LY 
Sbjct: 381 TDIVSMLVEFGVDLECQDNEGHAPLHLAVEGGHIETVEVLINRGANVNARSNRGATPLYM 440

Query: 191 AAANGNRQMVEFLMEMGADPTICIAVTGQS 280
           A A G   + +FL++ GA  +  +++   S
Sbjct: 441 AKAIGYDDISQFLVDRGASSSPPLSLPSSS 470


>gb|EYU20052.1| hypothetical protein MIMGU_mgv1a006127mg [Mimulus guttatus]
          Length = 456

 Score =  105 bits (263), Expect = 5e-21
 Identities = 56/101 (55%), Positives = 75/101 (74%)
 Frame = +2

Query: 2   DKITRLIEEACERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTA 181
           +++ +L +E C     ++CRDKEGRTPLHLAAS+G+L  A+VL+ AGA+V+A+  D RTA
Sbjct: 223 EEVEQLAKEECGG---VECRDKEGRTPLHLAASKGHLGGARVLVSAGANVDARSKDGRTA 279

Query: 182 LYRAAANGNRQMVEFLMEMGADPTICIAVTGQSPLDVAMEK 304
           LYRAAANG+R MVE L+  GADPTI      +S +DVA +K
Sbjct: 280 LYRAAANGDRGMVEMLLGAGADPTIGDVDHCRSAIDVARDK 320


>gb|EXB29253.1| Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
           subunit A [Morus notabilis]
          Length = 461

 Score =  104 bits (260), Expect = 1e-20
 Identities = 55/101 (54%), Positives = 74/101 (73%)
 Frame = +2

Query: 2   DKITRLIEEACERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTA 181
           D++  L+      G  LD  D+EG+TPLH+AA +GN+RCA+VL+++GAD +A+  D RTA
Sbjct: 225 DEVVELVRTMRGCGS-LDRGDREGKTPLHVAAEKGNIRCARVLVESGADKDARSRDGRTA 283

Query: 182 LYRAAANGNRQMVEFLMEMGADPTICIAVTGQSPLDVAMEK 304
           L+RAAANG+R MVE LMEMGADPT      G+ P+DVA +K
Sbjct: 284 LHRAAANGDRPMVEMLMEMGADPT-NPNDRGRLPIDVARDK 323



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/74 (40%), Positives = 42/74 (56%)
 Frame = +2

Query: 35  ERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQ 214
           E G  L+  D EG +PLHLA   G+L     L+  GA++N K + S T LY A A G+  
Sbjct: 388 EFGLDLESPDNEGHSPLHLAVVGGSLDTVVALVIKGANINIKNNRSATPLYMATAMGHHD 447

Query: 215 MVEFLMEMGADPTI 256
           + EFL+  GA  ++
Sbjct: 448 IAEFLITKGASSSL 461


>ref|XP_006356470.1| PREDICTED: ankyrin-2-like [Solanum tuberosum]
          Length = 476

 Score =  104 bits (260), Expect = 1e-20
 Identities = 54/85 (63%), Positives = 65/85 (76%)
 Frame = +2

Query: 50  LDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQMVEFL 229
           LD RDKEGRTPLHLAAS+G +   KVLI AGA V+A+  D RTAL+RAAANG+ QMV+ L
Sbjct: 244 LDSRDKEGRTPLHLAASKGLMESGKVLIGAGAQVDARSKDGRTALFRAAANGDCQMVKML 303

Query: 230 MEMGADPTICIAVTGQSPLDVAMEK 304
           +EMGADPT+     G+S LD+A  K
Sbjct: 304 VEMGADPTLTELHLGRSALDIARAK 328


>ref|XP_006435797.1| hypothetical protein CICLE_v10031427mg [Citrus clementina]
           gi|557537993|gb|ESR49037.1| hypothetical protein
           CICLE_v10031427mg [Citrus clementina]
          Length = 469

 Score =  104 bits (260), Expect = 1e-20
 Identities = 54/87 (62%), Positives = 68/87 (78%)
 Frame = +2

Query: 44  EPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQMVE 223
           E LDCRDKEGRTPLHLA ++ ++ CAKVL+++GAD  AKG D +TAL+ AAANG+R+MVE
Sbjct: 224 ESLDCRDKEGRTPLHLAVNKTSIGCAKVLLESGADKEAKGKDGKTALHNAAANGDRRMVE 283

Query: 224 FLMEMGADPTICIAVTGQSPLDVAMEK 304
            L+EM ADPTI     G+S  DVA +K
Sbjct: 284 MLIEMEADPTI-KDDRGRSCFDVARDK 309



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/74 (37%), Positives = 40/74 (54%)
 Frame = +2

Query: 35  ERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQ 214
           E G  ++C+D EG  PLHLA   G+    +VL+  GA+ NA+     T LY A A G   
Sbjct: 384 EFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDG 443

Query: 215 MVEFLMEMGADPTI 256
           + + LM  GA  ++
Sbjct: 444 ISQLLMNRGASASL 457


>ref|XP_006435796.1| hypothetical protein CICLE_v10031427mg [Citrus clementina]
           gi|568865821|ref|XP_006486267.1| PREDICTED:
           ankyrin-2-like isoform X1 [Citrus sinensis]
           gi|557537992|gb|ESR49036.1| hypothetical protein
           CICLE_v10031427mg [Citrus clementina]
          Length = 459

 Score =  104 bits (260), Expect = 1e-20
 Identities = 54/87 (62%), Positives = 68/87 (78%)
 Frame = +2

Query: 44  EPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQMVE 223
           E LDCRDKEGRTPLHLA ++ ++ CAKVL+++GAD  AKG D +TAL+ AAANG+R+MVE
Sbjct: 224 ESLDCRDKEGRTPLHLAVNKTSIGCAKVLLESGADKEAKGKDGKTALHNAAANGDRRMVE 283

Query: 224 FLMEMGADPTICIAVTGQSPLDVAMEK 304
            L+EM ADPTI     G+S  DVA +K
Sbjct: 284 MLIEMEADPTI-KDDRGRSCFDVARDK 309



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/74 (37%), Positives = 40/74 (54%)
 Frame = +2

Query: 35  ERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQ 214
           E G  ++C+D EG  PLHLA   G+    +VL+  GA+ NA+     T LY A A G   
Sbjct: 374 EFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDG 433

Query: 215 MVEFLMEMGADPTI 256
           + + LM  GA  ++
Sbjct: 434 ISQLLMNRGASASL 447


>ref|XP_006435795.1| hypothetical protein CICLE_v10031427mg [Citrus clementina]
           gi|568865823|ref|XP_006486268.1| PREDICTED:
           ankyrin-2-like isoform X2 [Citrus sinensis]
           gi|557537991|gb|ESR49035.1| hypothetical protein
           CICLE_v10031427mg [Citrus clementina]
          Length = 451

 Score =  104 bits (260), Expect = 1e-20
 Identities = 54/87 (62%), Positives = 68/87 (78%)
 Frame = +2

Query: 44  EPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQMVE 223
           E LDCRDKEGRTPLHLA ++ ++ CAKVL+++GAD  AKG D +TAL+ AAANG+R+MVE
Sbjct: 224 ESLDCRDKEGRTPLHLAVNKTSIGCAKVLLESGADKEAKGKDGKTALHNAAANGDRRMVE 283

Query: 224 FLMEMGADPTICIAVTGQSPLDVAMEK 304
            L+EM ADPTI     G+S  DVA +K
Sbjct: 284 MLIEMEADPTI-KDDRGRSCFDVARDK 309



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/74 (37%), Positives = 40/74 (54%)
 Frame = +2

Query: 35  ERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQ 214
           E G  ++C+D EG  PLHLA   G+    +VL+  GA+ NA+     T LY A A G   
Sbjct: 366 EFGADVECQDNEGHAPLHLAVEGGSTETVEVLLDNGANANARSKSGATPLYTAQAMGYDG 425

Query: 215 MVEFLMEMGADPTI 256
           + + LM  GA  ++
Sbjct: 426 ISQLLMNRGASASL 439


>ref|XP_004235236.1| PREDICTED: ankyrin-2-like [Solanum lycopersicum]
          Length = 476

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 51/85 (60%), Positives = 62/85 (72%)
 Frame = +2

Query: 50  LDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQMVEFL 229
           LD RDKEGRTPLHLAAS+G L   K LI AGA V+A+  D RTAL+RAAANG+ +M + L
Sbjct: 244 LDSRDKEGRTPLHLAASKGLLGSGKALIGAGAQVDARSKDGRTALFRAAANGDCEMAKML 303

Query: 230 MEMGADPTICIAVTGQSPLDVAMEK 304
           +EMGADPT+      +S LD+A  K
Sbjct: 304 VEMGADPTLTELHLRRSALDIARAK 328


>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four
           Identical Consensus Repeats
          Length = 126

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 42/87 (48%), Positives = 59/87 (67%)
 Frame = +2

Query: 35  ERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQ 214
           E G  ++ +DK GRTPLHLAA  G+L   K+L++AGADVNAK  + RT L+ AA NG+ +
Sbjct: 23  EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE 82

Query: 215 MVEFLMEMGADPTICIAVTGQSPLDVA 295
           +V+ L+E GAD        G++PL +A
Sbjct: 83  VVKLLLEAGADVN-AKDKNGRTPLHLA 108



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 37/70 (52%), Positives = 51/70 (72%)
 Frame = +2

Query: 35  ERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQ 214
           E G  ++ +DK GRTPLHLAA  G+L   K+L++AGADVNAK  + RT L+ AA NG+ +
Sbjct: 56  EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE 115

Query: 215 MVEFLMEMGA 244
           +V+ L+E GA
Sbjct: 116 VVKLLLEAGA 125



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 38/75 (50%), Positives = 52/75 (69%)
 Frame = +2

Query: 71  GRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQMVEFLMEMGADP 250
           GRTPLHLAA  G+L   K+L++AGADVNAK  + RT L+ AA NG+ ++V+ L+E GAD 
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61

Query: 251 TICIAVTGQSPLDVA 295
                  G++PL +A
Sbjct: 62  N-AKDKNGRTPLHLA 75


>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of
           Designed Ankyrin Repeat Proteins With A Redesigned C-
           Capping Module. gi|303324765|pdb|2XEE|B Chain B,
           Structural Determinants For Improved Thermal Stability
           Of Designed Ankyrin Repeat Proteins With A Redesigned C-
           Capping Module. gi|303324766|pdb|2XEE|C Chain C,
           Structural Determinants For Improved Thermal Stability
           Of Designed Ankyrin Repeat Proteins With A Redesigned C-
           Capping Module. gi|303324767|pdb|2XEE|D Chain D,
           Structural Determinants For Improved Thermal Stability
           Of Designed Ankyrin Repeat Proteins With A Redesigned C-
           Capping Module
          Length = 157

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 42/95 (44%), Positives = 63/95 (66%)
 Frame = +2

Query: 17  LIEEACERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAA 196
           ++E   + G  ++ +DK+G TPLHLAA EG+L   +VL+KAGADVNAK  D  T L+ AA
Sbjct: 50  IVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAA 109

Query: 197 ANGNRQMVEFLMEMGADPTICIAVTGQSPLDVAME 301
             G+ ++VE L++ GAD        G++P D+A++
Sbjct: 110 REGHLEIVEVLLKAGADVN-AQDKFGKTPFDLAID 143



 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 37/69 (53%), Positives = 50/69 (72%)
 Frame = +2

Query: 41  GEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQMV 220
           G  ++ +DK+G TPLHLAA EG+L   +VL+KAGADVNAK  D  T L+ AA  G+ ++V
Sbjct: 25  GADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIV 84

Query: 221 EFLMEMGAD 247
           E L++ GAD
Sbjct: 85  EVLLKAGAD 93



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 32/73 (43%), Positives = 46/73 (63%)
 Frame = +2

Query: 17  LIEEACERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAA 196
           ++E   + G  ++ +DK+G TPLHLAA EG+L   +VL+KAGADVNA+    +T    A 
Sbjct: 83  IVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAI 142

Query: 197 ANGNRQMVEFLME 235
            NGN  + E L +
Sbjct: 143 DNGNEDIAEVLQK 155


>ref|XP_004994677.1| hypothetical protein PTSG_04582 [Salpingoeca rosetta]
           gi|326427284|gb|EGD72854.1| hypothetical protein
           PTSG_04582 [Salpingoeca rosetta]
          Length = 706

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 41/95 (43%), Positives = 64/95 (67%)
 Frame = +2

Query: 23  EEACERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAAN 202
           +E  + G P+D +D  G TPLH A + G+L  A++L+KA A+V+AKG +  T L+ AA N
Sbjct: 87  QELLDHGAPIDAKDNAGWTPLHEACNHGHLELAELLLKANANVDAKGFEDITPLHDAAMN 146

Query: 203 GNRQMVEFLMEMGADPTICIAVTGQSPLDVAMEKE 307
           G+  +V+ L++ GADPT+     GQ+ +D+A E+E
Sbjct: 147 GHTDVVKLLVKHGADPTL-ENKDGQTAIDLADEEE 180


>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of
           Designed Ankyrin Repeat Proteins With A Redesigned C-
           Capping Module. gi|303324769|pdb|2XEH|B Chain B,
           Structural Determinants For Improved Thermal Stability
           Of Designed Ankyrin Repeat Proteins With A Redesigned C-
           Capping Module. gi|303324770|pdb|2XEH|C Chain C,
           Structural Determinants For Improved Thermal Stability
           Of Designed Ankyrin Repeat Proteins With A Redesigned C-
           Capping Module
          Length = 157

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 42/96 (43%), Positives = 63/96 (65%)
 Frame = +2

Query: 17  LIEEACERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAA 196
           ++E   + G  ++ +DK+G TPLHLAA EG+L   +VL+KAGADVNAK  D  T L+ AA
Sbjct: 50  IVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAA 109

Query: 197 ANGNRQMVEFLMEMGADPTICIAVTGQSPLDVAMEK 304
             G+ ++VE L++ GAD        G++P D+A+ +
Sbjct: 110 REGHLEIVEVLLKAGADVN-AQDKFGKTPFDLAIRE 144



 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 37/69 (53%), Positives = 50/69 (72%)
 Frame = +2

Query: 41  GEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQMV 220
           G  ++ +DK+G TPLHLAA EG+L   +VL+KAGADVNAK  D  T L+ AA  G+ ++V
Sbjct: 25  GADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIV 84

Query: 221 EFLMEMGAD 247
           E L++ GAD
Sbjct: 85  EVLLKAGAD 93



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 30/73 (41%), Positives = 45/73 (61%)
 Frame = +2

Query: 17  LIEEACERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAA 196
           ++E   + G  ++ +DK+G TPLHLAA EG+L   +VL+KAGADVNA+    +T    A 
Sbjct: 83  IVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAI 142

Query: 197 ANGNRQMVEFLME 235
             G+  + E L +
Sbjct: 143 REGHEDIAEVLQK 155


>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast
           Structural Genomics Consortium Target Or265.
           gi|414145862|pdb|4HQD|B Chain B, Crystal Structure Of
           Engineered Protein. Northeast Structural Genomics
           Consortium Target Or265
          Length = 169

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 40/95 (42%), Positives = 61/95 (64%)
 Frame = +2

Query: 17  LIEEACERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAA 196
           +++    +G  ++ +D +GRTPLH AA EG+    K+LI  GADVNAK  D RT L+ AA
Sbjct: 52  IVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAA 111

Query: 197 ANGNRQMVEFLMEMGADPTICIAVTGQSPLDVAME 301
             G++++V+ L+  GAD     +  G++PLD+A E
Sbjct: 112 KEGHKEIVKLLISKGADVNTSDS-DGRTPLDLARE 145



 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 39/95 (41%), Positives = 59/95 (62%)
 Frame = +2

Query: 20  IEEACERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAA 199
           +++  E G  ++  D +GRTPLH AA EG+    K+LI  GADVNAK  D RT L+ AA 
Sbjct: 20  VKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAK 79

Query: 200 NGNRQMVEFLMEMGADPTICIAVTGQSPLDVAMEK 304
            G++++V+ L+  GAD     +  G++PL  A ++
Sbjct: 80  EGHKEIVKLLISKGADVNAKDS-DGRTPLHYAAKE 113



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/75 (40%), Positives = 45/75 (60%)
 Frame = +2

Query: 17  LIEEACERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAA 196
           +++    +G  ++ +D +GRTPLH AA EG+    K+LI  GADVN    D RT L  A 
Sbjct: 85  IVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNTSDSDGRTPLDLAR 144

Query: 197 ANGNRQMVEFLMEMG 241
            +GN ++V+ L + G
Sbjct: 145 EHGNEEIVKLLEKQG 159


>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast
           Structural Genomics Consortium Target Or264.
           gi|403072299|pdb|4GPM|B Chain B, Crystal Structure Of
           Engineered Protein. Northeast Structural Genomics
           Consortium Target Or264
          Length = 169

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 40/88 (45%), Positives = 58/88 (65%)
 Frame = +2

Query: 38  RGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQM 217
           +G  ++ +D +GRTPLH AA  G+    K+LI  GADVNAK  D RT L+ AA NG++++
Sbjct: 59  KGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 118

Query: 218 VEFLMEMGADPTICIAVTGQSPLDVAME 301
           V+ L+  GAD     +  G++PLD+A E
Sbjct: 119 VKLLISKGADVNTSDS-DGRTPLDLARE 145



 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 40/94 (42%), Positives = 58/94 (61%)
 Frame = +2

Query: 20  IEEACERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAA 199
           +++  E G  ++  D +GRTPLH AA  G+    K+LI  GADVNAK  D RT L+ AA 
Sbjct: 20  VKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAE 79

Query: 200 NGNRQMVEFLMEMGADPTICIAVTGQSPLDVAME 301
           NG++++V+ L+  GAD     +  G++PL  A E
Sbjct: 80  NGHKEVVKLLISKGADVNAKDS-DGRTPLHHAAE 112



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/68 (42%), Positives = 41/68 (60%)
 Frame = +2

Query: 38  RGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAANGNRQM 217
           +G  ++ +D +GRTPLH AA  G+    K+LI  GADVN    D RT L  A  +GN ++
Sbjct: 92  KGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEV 151

Query: 218 VEFLMEMG 241
           V+ L + G
Sbjct: 152 VKLLEKQG 159


>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast
           Structural Genomics Consortium Target Or267.
           gi|408536131|pdb|4HB5|B Chain B, Crystal Structure Of
           Engineered Protein. Northeast Structural Genomics
           Consortium Target Or267
          Length = 169

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 39/95 (41%), Positives = 60/95 (63%)
 Frame = +2

Query: 17  LIEEACERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAA 196
           +++    +G   + +D +GRTPLH AA  G+    K+L+  GAD NAK  D RT L+ AA
Sbjct: 52  IVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAA 111

Query: 197 ANGNRQMVEFLMEMGADPTICIAVTGQSPLDVAME 301
            NG++++V+ L+  GADP    +  G++PLD+A E
Sbjct: 112 ENGHKEIVKLLLSKGADPNTSDS-DGRTPLDLARE 145



 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 39/94 (41%), Positives = 57/94 (60%)
 Frame = +2

Query: 20  IEEACERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAAA 199
           +++  E G   +  D +GRTPLH AA  G+    K+L+  GAD NAK  D RT L+ AA 
Sbjct: 20  VKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAE 79

Query: 200 NGNRQMVEFLMEMGADPTICIAVTGQSPLDVAME 301
           NG++++V+ L+  GADP    +  G++PL  A E
Sbjct: 80  NGHKEIVKLLLSKGADPNAKDS-DGRTPLHYAAE 112



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/75 (36%), Positives = 42/75 (56%)
 Frame = +2

Query: 17  LIEEACERGEPLDCRDKEGRTPLHLAASEGNLRCAKVLIKAGADVNAKGHDSRTALYRAA 196
           +++    +G   + +D +GRTPLH AA  G+    K+L+  GAD N    D RT L  A 
Sbjct: 85  IVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNTSDSDGRTPLDLAR 144

Query: 197 ANGNRQMVEFLMEMG 241
            +GN ++V+ L + G
Sbjct: 145 EHGNEEIVKLLEKQG 159