BLASTX nr result
ID: Akebia25_contig00048284
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia25_contig00048284 (591 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006476161.1| PREDICTED: pentatricopeptide repeat-containi... 276 2e-72 ref|XP_006450596.1| hypothetical protein CICLE_v10010742mg [Citr... 276 2e-72 ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containi... 272 4e-71 ref|XP_004292867.1| PREDICTED: pentatricopeptide repeat-containi... 272 6e-71 ref|XP_007227273.1| hypothetical protein PRUPE_ppa017736mg [Prun... 270 3e-70 ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containi... 269 4e-70 ref|XP_007137157.1| hypothetical protein PHAVU_009G104600g [Phas... 261 8e-68 ref|XP_002324255.1| pentatricopeptide repeat-containing family p... 260 2e-67 ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containi... 258 1e-66 ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 257 1e-66 ref|XP_004501200.1| PREDICTED: pentatricopeptide repeat-containi... 249 4e-64 ref|XP_002884209.1| pentatricopeptide repeat-containing protein ... 248 1e-63 ref|XP_004247963.1| PREDICTED: pentatricopeptide repeat-containi... 247 2e-63 ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis th... 244 1e-62 ref|XP_006299486.1| hypothetical protein CARUB_v10015651mg [Caps... 244 2e-62 gb|EXC32781.1| hypothetical protein L484_019895 [Morus notabilis] 243 3e-62 ref|XP_003603587.1| Pentatricopeptide repeat-containing protein ... 241 8e-62 ref|XP_006408981.1| hypothetical protein EUTSA_v10001958mg [Eutr... 239 4e-61 ref|XP_006360941.1| PREDICTED: pentatricopeptide repeat-containi... 238 7e-61 ref|XP_002516590.1| pentatricopeptide repeat-containing protein,... 238 1e-60 >ref|XP_006476161.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540-like [Citrus sinensis] Length = 541 Score = 276 bits (707), Expect = 2e-72 Identities = 125/196 (63%), Positives = 161/196 (82%) Frame = -2 Query: 590 LLFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKA 411 LLF Q+ +PN+FLYNA++R YT+NHLY AI ++KQ+LR P+ PDKFT P IK+ Sbjct: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKS 126 Query: 410 CCGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISW 231 C GLLC LGKQIH +VCKFG S+S+ +NA++D+Y KCD L +AH+VFEEM+DRD+++W Sbjct: 127 CAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW 186 Query: 230 NIIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMK 51 N +ISG+ARLGQM++AR +FD MPYKTIVSWT +ISGYT IG Y +ALDVFR+MQ VG++ Sbjct: 187 NNLISGYARLGQMKKARMLFDKMPYKTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246 Query: 50 PDEITIVSILPACAHL 3 PDEI+IVS+LPACA L Sbjct: 247 PDEISIVSVLPACAQL 262 Score = 91.7 bits (226), Expect = 1e-16 Identities = 55/195 (28%), Positives = 96/195 (49%) Frame = -2 Query: 590 LLFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKA 411 +LF+++ I + A++ YTH Y +A+ +F+Q+ PD+ + + A Sbjct: 204 MLFDKMPYKTIVSWTAMISGYTHIGSYAEALDVFRQM-----QMVGIEPDEISIVSVLPA 258 Query: 410 CCGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISW 231 C L L+LG+ IH K + +VI NA+++MY+KC + A Q+F++M +RDV+SW Sbjct: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318 Query: 230 NIIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMK 51 + +I G A G+ + A+ +F MQ + + Sbjct: 319 STVIGGLANHGKAHK-------------------------------AIHLFHEMQRLKVP 347 Query: 50 PDEITIVSILPACAH 6 P++IT + +L ACAH Sbjct: 348 PNDITFIGLLSACAH 362 >ref|XP_006450596.1| hypothetical protein CICLE_v10010742mg [Citrus clementina] gi|557553822|gb|ESR63836.1| hypothetical protein CICLE_v10010742mg [Citrus clementina] Length = 605 Score = 276 bits (707), Expect = 2e-72 Identities = 125/196 (63%), Positives = 161/196 (82%) Frame = -2 Query: 590 LLFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKA 411 LLF Q+ +PN+FLYNA++R YT+NHLY AI ++KQ+LR P+ PDKFT P IK+ Sbjct: 67 LLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFTLPFVIKS 126 Query: 410 CCGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISW 231 C GLLC LGKQIH +VCKFG S+S+ +NA++D+Y KCD L +AH+VFEEM+DRD+++W Sbjct: 127 CAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMTDRDIVAW 186 Query: 230 NIIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMK 51 N +ISG+ARLGQM++AR +FD MPYKTIVSWT +ISGYT IG Y +ALDVFR+MQ VG++ Sbjct: 187 NNLISGYARLGQMKKARMLFDKMPYKTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIE 246 Query: 50 PDEITIVSILPACAHL 3 PDEI+IVS+LPACA L Sbjct: 247 PDEISIVSVLPACAQL 262 Score = 91.7 bits (226), Expect = 1e-16 Identities = 55/195 (28%), Positives = 96/195 (49%) Frame = -2 Query: 590 LLFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKA 411 +LF+++ I + A++ YTH Y +A+ +F+Q+ PD+ + + A Sbjct: 204 MLFDKMPYKTIVSWTAMISGYTHIGSYAEALDVFRQM-----QMVGIEPDEISIVSVLPA 258 Query: 410 CCGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISW 231 C L L+LG+ IH K + +VI NA+++MY+KC + A Q+F++M +RDV+SW Sbjct: 259 CAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFDQMVERDVVSW 318 Query: 230 NIIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMK 51 + +I G A G+ + A+ +F MQ + + Sbjct: 319 STVIGGLANHGKAHK-------------------------------AIHLFHEMQRLKVP 347 Query: 50 PDEITIVSILPACAH 6 P++IT + +L ACAH Sbjct: 348 PNDITFIGLLSACAH 362 >ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20540-like [Vitis vinifera] Length = 541 Score = 272 bits (696), Expect = 4e-71 Identities = 119/196 (60%), Positives = 158/196 (80%) Frame = -2 Query: 590 LLFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKA 411 LLF ++ PN FLYNA++R Y HN +Y+ AIT++KQ+L H + FPDKFTFP +K+ Sbjct: 67 LLFKRVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKS 126 Query: 410 CCGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISW 231 C GL+C DLGKQ+H +V KFG SN+V++N++++MY+KCD+L DAH+VFEEM++RD +SW Sbjct: 127 CAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSW 186 Query: 230 NIIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMK 51 N +ISGH RLGQMRRAR +F+ M KTI SWT ++SGY RIGCY DAL+ FRRMQ VG++ Sbjct: 187 NTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIE 246 Query: 50 PDEITIVSILPACAHL 3 PDEI++VS+LPACA L Sbjct: 247 PDEISLVSVLPACAQL 262 Score = 88.6 bits (218), Expect = 1e-15 Identities = 54/194 (27%), Positives = 93/194 (47%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 +F ++ IF + AI+ Y Y A+ F+++ PD+ + + AC Sbjct: 205 IFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRM-----QMVGIEPDEISLVSVLPAC 259 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 L L+LGK IH K G + N + NA+++MY KC ++ + ++F++M++RDVISW+ Sbjct: 260 AQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNERDVISWS 319 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 +I G A G+ +A+++F+ MQ ++P Sbjct: 320 TMIVGLANHGRAH-------------------------------EAIELFQEMQKAKIEP 348 Query: 47 DEITIVSILPACAH 6 + IT V +L ACAH Sbjct: 349 NIITFVGLLSACAH 362 >ref|XP_004292867.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540-like [Fragaria vesca subsp. vesca] Length = 544 Score = 272 bits (695), Expect = 6e-71 Identities = 119/196 (60%), Positives = 162/196 (82%) Frame = -2 Query: 590 LLFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKA 411 LLF Q+++PN+FL+NA++R YTHN++Y AI ++KQ+LRHP+++ FPDKFTFP IK Sbjct: 67 LLFKQVLEPNVFLFNAMIRAYTHNYVYDSAIALYKQMLRHPESETLIFPDKFTFPFVIKC 126 Query: 410 CCGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISW 231 C GL C DLG+Q+H V KFGP S+ +I+NA+M Y KCDNL DAH+VF+EM++RDVISW Sbjct: 127 CAGLGCEDLGRQVHGQVWKFGPGSHLLIENALMAFYTKCDNLRDAHKVFDEMTERDVISW 186 Query: 230 NIIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMK 51 N ++SG+ RLGQM +AR +F+ M K+IVSWT ++SGYTRIGCY DAL++FRRMQ +G++ Sbjct: 187 NSLLSGYVRLGQMTKARAVFEEMSDKSIVSWTAMVSGYTRIGCYGDALEIFRRMQMLGIE 246 Query: 50 PDEITIVSILPACAHL 3 PDEI++VS+LPAC+ L Sbjct: 247 PDEISVVSVLPACSQL 262 Score = 79.7 bits (195), Expect = 5e-13 Identities = 53/194 (27%), Positives = 94/194 (48%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 +F ++ +I + A++ YT Y A+ IF+++ PD+ + + AC Sbjct: 205 VFEEMSDKSIVSWTAMVSGYTRIGCYGDALEIFRRM-----QMLGIEPDEISVVSVLPAC 259 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 L L++GK IH K + + + NA+++MY+KC + A Q+F++MS RDVISW+ Sbjct: 260 SQLGALEVGKWIHRYSDKKRLLQSVSVCNALIEMYVKCGCIDQAWQLFDQMSGRDVISWS 319 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 +I+G A G+ +A+++F+ MQ V +P Sbjct: 320 TMIAGLANNGKAH-------------------------------EAVELFQEMQRVKTEP 348 Query: 47 DEITIVSILPACAH 6 + IT + +L AC+H Sbjct: 349 NGITFLGVLSACSH 362 >ref|XP_007227273.1| hypothetical protein PRUPE_ppa017736mg [Prunus persica] gi|462424209|gb|EMJ28472.1| hypothetical protein PRUPE_ppa017736mg [Prunus persica] Length = 544 Score = 270 bits (689), Expect = 3e-70 Identities = 120/196 (61%), Positives = 163/196 (83%) Frame = -2 Query: 590 LLFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKA 411 LLF Q+++PN+FL+NA++R YTH+ +Y A+T++KQ+ R+ QA+ FPDKFTFP IK+ Sbjct: 67 LLFKQVLEPNVFLFNAMIRAYTHHQMYDLAVTLYKQMPRYSQAENPIFPDKFTFPFIIKS 126 Query: 410 CCGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISW 231 C GL C LG QIH V KFGP S+ +I+NA++D+Y KC+NLTDAH+VF+ M++ DV+SW Sbjct: 127 CAGLFCEGLGTQIHAQVRKFGPKSHLLIENALLDLYTKCENLTDAHKVFDGMTEMDVVSW 186 Query: 230 NIIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMK 51 N ++SG+ARLGQMR+AR +F+ +P KTIVSWTT+ISGYTRIGCY DALD+FR+MQ +G++ Sbjct: 187 NSLLSGYARLGQMRKARGVFEEIPNKTIVSWTTMISGYTRIGCYADALDIFRQMQVLGIE 246 Query: 50 PDEITIVSILPACAHL 3 DEI+IVS+LPACA L Sbjct: 247 ADEISIVSVLPACAQL 262 Score = 79.7 bits (195), Expect = 5e-13 Identities = 53/194 (27%), Positives = 91/194 (46%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 +F +I I + ++ YT Y A+ IF+Q+ D+ + + AC Sbjct: 205 VFEEIPNKTIVSWTTMISGYTRIGCYADALDIFRQM-----QVLGIEADEISIVSVLPAC 259 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 L L++GK IH K + ++ + NA+++MY+KC + A Q+F++M +RDVISW+ Sbjct: 260 AQLGALEVGKWIHMYSDKKRLLQSTCVCNALIEMYVKCGCVDQAWQLFDKMLERDVISWS 319 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 +I+G A G+ R +A+ +F+ MQ +KP Sbjct: 320 TMIAGLANHGKAR-------------------------------EAIKLFQGMQRAKVKP 348 Query: 47 DEITIVSILPACAH 6 + IT + +L AC H Sbjct: 349 NGITFLGLLSACTH 362 >ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540 [Vitis vinifera] Length = 537 Score = 269 bits (688), Expect = 4e-70 Identities = 118/196 (60%), Positives = 157/196 (80%) Frame = -2 Query: 590 LLFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKA 411 LLF + PN FLYNA++R Y HN +Y+ AIT++KQ+L +P + FPDKFTFP +K+ Sbjct: 67 LLFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKS 126 Query: 410 CCGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISW 231 C GL+C DLGKQ+H +V KFG SN+V++N++++MY+KCD+L DAH+VFEEM++RD +SW Sbjct: 127 CAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSW 186 Query: 230 NIIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMK 51 N +ISGH RLGQMRRAR +F+ M KTI SWT ++SGY RIGCY DAL+ FRRMQ VG++ Sbjct: 187 NTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIE 246 Query: 50 PDEITIVSILPACAHL 3 PDEI++VS+LP CA L Sbjct: 247 PDEISLVSVLPDCAQL 262 Score = 87.0 bits (214), Expect = 3e-15 Identities = 54/194 (27%), Positives = 90/194 (46%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 +F ++ IF + AI+ Y Y A+ F+++ PD+ + + C Sbjct: 205 IFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRM-----QMVGIEPDEISLVSVLPDC 259 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 L L+LGK IH K G + N + NA+++MY KC ++ ++F++M +RDVISW+ Sbjct: 260 AQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWS 319 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 +I G A G+ R +A+++F+ MQ ++P Sbjct: 320 TMIVGLANHGRAR-------------------------------EAIELFQEMQKAKIEP 348 Query: 47 DEITIVSILPACAH 6 IT V +L ACAH Sbjct: 349 SIITFVGLLTACAH 362 >ref|XP_007137157.1| hypothetical protein PHAVU_009G104600g [Phaseolus vulgaris] gi|561010244|gb|ESW09151.1| hypothetical protein PHAVU_009G104600g [Phaseolus vulgaris] Length = 527 Score = 261 bits (668), Expect = 8e-68 Identities = 119/196 (60%), Positives = 155/196 (79%) Frame = -2 Query: 590 LLFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKA 411 L+F + PN+F YNAI+RT THNH + AIT+F ++LRH A SA PDKFTFP IK+ Sbjct: 60 LIFQNLEDPNVFSYNAIIRTCTHNHKHSLAITVFNEMLRH--AMKSALPDKFTFPSVIKS 117 Query: 410 CCGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISW 231 C G+LC LG+Q+H VCKFGP S+++ DNA++DMY KC +L+ A+QVFEEM+DRD +SW Sbjct: 118 CAGILCHRLGQQVHAQVCKFGPKSHAITDNALIDMYTKCGDLSGAYQVFEEMADRDSVSW 177 Query: 230 NIIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMK 51 N +ISGHARLGQM+ AR FD MP +TIVSWTT+I+GY R GC +AL++FR MQ VG++ Sbjct: 178 NSLISGHARLGQMKSAREAFDEMPCRTIVSWTTMINGYARAGCSVEALEIFREMQVVGIE 237 Query: 50 PDEITIVSILPACAHL 3 PDEI+++S+LPACA L Sbjct: 238 PDEISVISVLPACAQL 253 Score = 72.0 bits (175), Expect = 1e-10 Identities = 49/193 (25%), Positives = 88/193 (45%) Frame = -2 Query: 584 FNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKACC 405 F+++ I + ++ Y ++A+ IF+++ PD+ + + AC Sbjct: 197 FDEMPCRTIVSWTTMINGYARAGCSVEALEIFREM-----QVVGIEPDEISVISVLPACA 251 Query: 404 GLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWNI 225 L L++GK IH K G + + + NA+++MY KC + ++ +F++M ++DVI W+ Sbjct: 252 QLGALEVGKWIHKYSEKSGFLKKTAVCNALIEMYSKCGCIDESLGLFDQMVEKDVICWST 311 Query: 224 IISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKPD 45 +I G A G+ GY A+ VF MQ G+ P+ Sbjct: 312 MIGGLANHGK------------------------GYA-------AIRVFEDMQNAGVAPN 340 Query: 44 EITIVSILPACAH 6 +T V +L AC H Sbjct: 341 GVTFVGVLSACVH 353 >ref|XP_002324255.1| pentatricopeptide repeat-containing family protein [Populus trichocarpa] gi|222865689|gb|EEF02820.1| pentatricopeptide repeat-containing family protein [Populus trichocarpa] Length = 547 Score = 260 bits (665), Expect = 2e-67 Identities = 118/198 (59%), Positives = 158/198 (79%), Gaps = 2/198 (1%) Frame = -2 Query: 590 LLFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILR--HPQAKPSAFPDKFTFPITI 417 LLF Q+ +PN +LYNA++R +THN +Y AI +K++LR P+++ FPD+FTFP I Sbjct: 67 LLFKQVKEPNGYLYNAMIRAHTHNKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVI 126 Query: 416 KACCGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVI 237 K+C GL+C +LGKQ+H ++CKFGP SN ++NA++DMY KC +L DAH+VF+ M +RD I Sbjct: 127 KSCSGLVCYNLGKQVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAI 186 Query: 236 SWNIIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVG 57 SWN IISGH +GQMR+A +FDLMPY+TIVSWT +ISGYTR+G Y DAL VFR+MQ VG Sbjct: 187 SWNSIISGHVGVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVG 246 Query: 56 MKPDEITIVSILPACAHL 3 ++PDEI+I+S+LPACA L Sbjct: 247 VEPDEISIISVLPACAQL 264 Score = 86.3 bits (212), Expect = 6e-15 Identities = 56/194 (28%), Positives = 94/194 (48%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 LF+ + I + A++ YT Y A+ +F+Q+ PD+ + + AC Sbjct: 207 LFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQM-----QIVGVEPDEISIISVLPAC 261 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 L L++GK IH + G + + I NA+M+MY KC + A+Q+F++MS DVISW+ Sbjct: 262 AQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSKGDVISWS 321 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 +I G A G+ R +A+++F+RM+ ++P Sbjct: 322 TMIGGLANHGKAR-------------------------------EAIELFKRMKKAKIEP 350 Query: 47 DEITIVSILPACAH 6 + IT + +L ACAH Sbjct: 351 NGITFLGLLSACAH 364 >ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540-like [Glycine max] Length = 535 Score = 258 bits (658), Expect = 1e-66 Identities = 115/196 (58%), Positives = 155/196 (79%) Frame = -2 Query: 590 LLFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKA 411 ++F Q+ PN+F YNAI+RTYTHNH + AIT+F Q+L SA PDKFTFP IK+ Sbjct: 60 MIFQQLENPNVFSYNAIIRTYTHNHKHPLAITVFNQML----TTKSASPDKFTFPFVIKS 115 Query: 410 CCGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISW 231 C GLLC LG+Q+H +VCKFGP ++++ +NA++DMY KC +++ A+QV+EEM++RD +SW Sbjct: 116 CAGLLCRRLGQQVHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSW 175 Query: 230 NIIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMK 51 N +ISGH RLGQM+ AR +FD MP +TIVSWTT+I+GY R GCY DAL +FR MQ VG++ Sbjct: 176 NSLISGHVRLGQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIE 235 Query: 50 PDEITIVSILPACAHL 3 PDEI+++S+LPACA L Sbjct: 236 PDEISVISVLPACAQL 251 Score = 79.3 bits (194), Expect = 7e-13 Identities = 54/194 (27%), Positives = 90/194 (46%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 +F+++ I + ++ Y Y A+ IF+++ PD+ + + AC Sbjct: 194 VFDEMPCRTIVSWTTMINGYARGGCYADALGIFREM-----QVVGIEPDEISVISVLPAC 248 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 L L++GK IH K G + N+ + NA+++MY KC + +A +F +M ++DVISW+ Sbjct: 249 AQLGALEVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQMIEKDVISWS 308 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 +I G A G+ GY A+ VF MQ G+ P Sbjct: 309 TMIGGLANHGK------------------------GYA-------AIRVFEDMQKAGVTP 337 Query: 47 DEITIVSILPACAH 6 + +T V +L ACAH Sbjct: 338 NGVTFVGVLSACAH 351 >ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g20540-like [Vitis vinifera] Length = 515 Score = 257 bits (657), Expect = 1e-66 Identities = 115/196 (58%), Positives = 153/196 (78%) Frame = -2 Query: 590 LLFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKA 411 LLF ++ PN FLYNA++R Y HN +YI AIT+ KQ+L H + FPDKFTFP +K Sbjct: 41 LLFKRVADPNAFLYNAMIRAYKHNKVYILAITVHKQMLGHSHGENPXFPDKFTFPFVVKX 100 Query: 410 CCGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISW 231 C GL+C +LGKQ+H + KFGP SN+VI+N++++MY+KCD+L DAH+VFEEM++RD +SW Sbjct: 101 CAGLMCYNLGKQVHGHAFKFGPKSNTVIENSLVEMYVKCDSLDDAHRVFEEMTERDAVSW 160 Query: 230 NIIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMK 51 N +ISGH RLGQMRRAR +F+ + KTI SWT ++SGY RIGC+ AL+ FRRMQ V ++ Sbjct: 161 NTLISGHVRLGQMRRARAIFEELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVDIE 220 Query: 50 PDEITIVSILPACAHL 3 DEI++VS+LPACA L Sbjct: 221 LDEISLVSVLPACAQL 236 Score = 75.5 bits (184), Expect = 1e-11 Identities = 50/194 (25%), Positives = 91/194 (46%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 +F ++ IF + AI+ Y + A+ F+++ D+ + + AC Sbjct: 179 IFEELQDKTIFSWTAIVSGYARIGCHAVALEFFRRM-----QMVDIELDEISLVSVLPAC 233 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 L L+LGK IH K G + + + NA++++Y K ++ + ++F +M++RDVISW+ Sbjct: 234 AQLGALELGKWIHIYADKAGFLRDICVCNALIEVYAKRGSMDEGRRLFHKMNERDVISWS 293 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 +I G A G+ R +A+++F+ MQ ++P Sbjct: 294 TMIVGLANHGRAR-------------------------------EAIELFQEMQKAKVEP 322 Query: 47 DEITIVSILPACAH 6 + IT V +L ACAH Sbjct: 323 NIITFVGLLSACAH 336 >ref|XP_004501200.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540-like isoform X1 [Cicer arietinum] gi|502132029|ref|XP_004501201.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540-like isoform X2 [Cicer arietinum] gi|502132032|ref|XP_004501202.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540-like isoform X3 [Cicer arietinum] gi|502132034|ref|XP_004501203.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540-like isoform X4 [Cicer arietinum] Length = 553 Score = 249 bits (636), Expect = 4e-64 Identities = 117/196 (59%), Positives = 153/196 (78%) Frame = -2 Query: 590 LLFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKA 411 LLF Q++ PN F YNAI+RTYTHN + AITIF Q+L H + S+FPDKFTFP +K+ Sbjct: 63 LLFQQLLHPNNFSYNAIIRTYTHNRHHSLAITIFIQMLAH--STKSSFPDKFTFPFVVKS 120 Query: 410 CCGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISW 231 C G+LC LG QIH V KFG S+++ +NA++DMY KC NLT+A VF+EM+ RDV+SW Sbjct: 121 CAGILCHRLGMQIHAVVFKFGCNSHNITENALIDMYTKCGNLTNACHVFDEMTHRDVVSW 180 Query: 230 NIIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMK 51 N +I G+A+LGQM+ AR +FD MP++TIVSWTT+I+G R GCY DALD+FR MQ VG++ Sbjct: 181 NSLIFGYAKLGQMKSARKLFDEMPFRTIVSWTTMITGNARTGCYGDALDIFREMQMVGIE 240 Query: 50 PDEITIVSILPACAHL 3 PDEI+I+++LPACA L Sbjct: 241 PDEISIIAVLPACAQL 256 Score = 75.5 bits (184), Expect = 1e-11 Identities = 51/194 (26%), Positives = 90/194 (46%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 LF+++ I + ++ Y A+ IF+++ PD+ + + AC Sbjct: 199 LFDEMPFRTIVSWTTMITGNARTGCYGDALDIFREM-----QMVGIEPDEISIIAVLPAC 253 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 L L++GK IH K G + + I NA+++MY KC + +A +F+++ ++DVISW+ Sbjct: 254 AQLGALEVGKWIHMYADKNGFLQKTGICNALVEMYAKCGCIDEARSLFDQLVEKDVISWS 313 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 +I G A G+ GY A+ +F+ MQ + P Sbjct: 314 TMIGGLANHGK------------------------GYA-------AIQLFQEMQKAQVTP 342 Query: 47 DEITIVSILPACAH 6 +EIT + +L AC+H Sbjct: 343 NEITFLGVLLACSH 356 >ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 534 Score = 248 bits (632), Expect = 1e-63 Identities = 115/195 (58%), Positives = 151/195 (77%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 LFNQ+ PN+FLYN+I+R YTHN LY I I+KQ+LR K FPD+FTFP K+C Sbjct: 64 LFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLR----KTIEFPDRFTFPFMFKSC 119 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 L LGKQ+H ++ KFGP + V +NA++DMYMK D+L DAH+VF+EMS+RDVISWN Sbjct: 120 ASLGSCYLGKQVHGHLYKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWN 179 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 ++SG+ARLGQM++A+ +F LM KTIVSWT +ISGYT IGCY +A+D FR MQ G++P Sbjct: 180 SLLSGYARLGQMKKAKGLFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEP 239 Query: 47 DEITIVSILPACAHL 3 DEI+++S+LP+CAHL Sbjct: 240 DEISLISVLPSCAHL 254 Score = 85.5 bits (210), Expect = 1e-14 Identities = 55/195 (28%), Positives = 92/195 (47%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 LF+ +I I + A++ YT Y++A+ F+++ PD+ + + +C Sbjct: 197 LFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREM-----QLAGIEPDEISLISVLPSC 251 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 L L+LGK IH + G + + + NA+++MY KC L+ A Q+FE+ +DVISW+ Sbjct: 252 AHLGSLELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQTKGKDVISWS 311 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 +ISG+A G R A + F MQ +KP Sbjct: 312 TMISGYAYHGNAHR-------------------------------AFETFIEMQRAKVKP 340 Query: 47 DEITIVSILPACAHL 3 + IT + +L AC+H+ Sbjct: 341 NGITFLGLLSACSHV 355 >ref|XP_004247963.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540-like [Solanum lycopersicum] Length = 534 Score = 247 bits (630), Expect = 2e-63 Identities = 112/196 (57%), Positives = 151/196 (77%) Frame = -2 Query: 590 LLFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKA 411 LLF Q+ PN +LYN+I+R YTH H YI I ++KQ++ + PD++T+P I++ Sbjct: 65 LLFKQVEHPNNYLYNSIIRAYTHKHRYISCINVYKQMMTC-----AISPDEYTYPFVIRS 119 Query: 410 CCGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISW 231 C +L +D+G+Q H +VCKFG ++VI N+++DMY+KCD + DAH VF+EMSDRDVISW Sbjct: 120 CSAILRVDVGEQFHVHVCKFGLYCSNVIANSLLDMYVKCDRMRDAHMVFDEMSDRDVISW 179 Query: 230 NIIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMK 51 N +I GH RL Q+R+AR +FD+MP K+IVSWT +ISGYT+ GCY DALDVFRRMQ VG+K Sbjct: 180 NSLICGHVRLRQVRKARALFDVMPDKSIVSWTAMISGYTKTGCYGDALDVFRRMQMVGVK 239 Query: 50 PDEITIVSILPACAHL 3 PD I++VS+LPACA L Sbjct: 240 PDWISLVSVLPACAQL 255 Score = 94.4 bits (233), Expect = 2e-17 Identities = 59/194 (30%), Positives = 95/194 (48%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 LF+ + +I + A++ YT Y A+ +F+++ PD + + AC Sbjct: 198 LFDVMPDKSIVSWTAMISGYTKTGCYGDALDVFRRM-----QMVGVKPDWISLVSVLPAC 252 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 L L+LGK IH K+G + + + NA+M+MY KC ++ +A Q+F +MS+RDVISW+ Sbjct: 253 AQLGALELGKWIHFYADKYGYLRKTSVCNALMEMYAKCGSVNEAWQLFNQMSERDVISWS 312 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 +I G A G+ + +AL +F MQ ++P Sbjct: 313 TMIGGLANHGRAQ-------------------------------EALKLFHEMQRSAVEP 341 Query: 47 DEITIVSILPACAH 6 +EIT V +L ACAH Sbjct: 342 NEITFVGLLCACAH 355 >ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana] gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540 gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana] gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana] Length = 534 Score = 244 bits (623), Expect = 1e-62 Identities = 113/195 (57%), Positives = 149/195 (76%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 LFNQ+ PN+FLYN+I+R YTHN LY I I+KQ+LR K PD+FTFP K+C Sbjct: 64 LFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLR----KSFELPDRFTFPFMFKSC 119 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 L LGKQ+H ++CKFGP + V +NA++DMYMK D+L DAH+VF+EM +RDVISWN Sbjct: 120 ASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWN 179 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 ++SG+ARLGQM++A+ +F LM KTIVSWT +ISGYT IGCY +A+D FR MQ G++P Sbjct: 180 SLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEP 239 Query: 47 DEITIVSILPACAHL 3 DEI+++S+LP+CA L Sbjct: 240 DEISLISVLPSCAQL 254 Score = 82.4 bits (202), Expect = 8e-14 Identities = 52/195 (26%), Positives = 92/195 (47%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 LF+ ++ I + A++ YT Y++A+ F+++ PD+ + + +C Sbjct: 197 LFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREM-----QLAGIEPDEISLISVLPSC 251 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 L L+LGK IH + G + + + NA+++MY KC ++ A Q+F +M +DVISW+ Sbjct: 252 AQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWS 311 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 +ISG+A G A++ F MQ +KP Sbjct: 312 TMISGYAYHGNAH-------------------------------GAIETFNEMQRAKVKP 340 Query: 47 DEITIVSILPACAHL 3 + IT + +L AC+H+ Sbjct: 341 NGITFLGLLSACSHV 355 >ref|XP_006299486.1| hypothetical protein CARUB_v10015651mg [Capsella rubella] gi|482568195|gb|EOA32384.1| hypothetical protein CARUB_v10015651mg [Capsella rubella] Length = 534 Score = 244 bits (622), Expect = 2e-62 Identities = 111/195 (56%), Positives = 150/195 (76%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 LFNQ+ PN+FLYN+I+R YTH+ LY + I I++Q+ K PD+FTFP K+C Sbjct: 64 LFNQVSYPNVFLYNSIIRAYTHHSLYCEVIRIYRQLFM----KSIELPDRFTFPFMFKSC 119 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 L LGKQ+H ++CKFGP + V +NA++DMYMK D+L DA +VF+EMSDRDVISWN Sbjct: 120 ASLGSCYLGKQVHGHLCKFGPKFHVVTENALIDMYMKFDDLADADRVFDEMSDRDVISWN 179 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 ++SG+ARLGQM++A+ +F LMP KTIVSWT +ISGY+ IGCY +A+D FR MQ G++P Sbjct: 180 SLLSGYARLGQMKKAKALFRLMPDKTIVSWTAMISGYSGIGCYVEAMDFFREMQLAGIEP 239 Query: 47 DEITIVSILPACAHL 3 DEI+++S+LP+CAHL Sbjct: 240 DEISLISVLPSCAHL 254 Score = 80.9 bits (198), Expect = 2e-13 Identities = 51/195 (26%), Positives = 92/195 (47%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 LF + I + A++ Y+ Y++A+ F+++ PD+ + + +C Sbjct: 197 LFRLMPDKTIVSWTAMISGYSGIGCYVEAMDFFREM-----QLAGIEPDEISLISVLPSC 251 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 L L+LGK IH + + + + NA+++MY KC ++ A Q+F++M +DVISW+ Sbjct: 252 AHLGSLELGKWIHMYAERRRFLKQTGVCNALIEMYSKCGVISQAIQLFDQMKRKDVISWS 311 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 +ISG+A G R A+++F MQ +KP Sbjct: 312 TMISGYAHHGNAHR-------------------------------AIEIFNEMQRAKVKP 340 Query: 47 DEITIVSILPACAHL 3 + IT + +L AC+H+ Sbjct: 341 NGITFLGLLSACSHV 355 >gb|EXC32781.1| hypothetical protein L484_019895 [Morus notabilis] Length = 549 Score = 243 bits (620), Expect = 3e-62 Identities = 108/198 (54%), Positives = 154/198 (77%), Gaps = 2/198 (1%) Frame = -2 Query: 590 LLFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRH--PQAKPSAFPDKFTFPITI 417 LLF Q++Q N+FLYNAI++ Y +N Y A+ ++KQ++ K P+KFTFP + Sbjct: 67 LLFQQVVQGNVFLYNAIIKAYANNSRYSLALILYKQMVSQISEDEKNPMLPNKFTFPFVV 126 Query: 416 KACCGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVI 237 K+C GLLC+ LG+Q+H +V KFG S+S+ DNA+MDMYMKC +L AH++FEEM +RD++ Sbjct: 127 KSCAGLLCVSLGRQVHAHVWKFGTKSHSITDNALMDMYMKCGSLEYAHKLFEEMRERDLV 186 Query: 236 SWNIIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVG 57 SWN ++SG+ARLGQMR+AR +F+ MP K+IVSWT LISGY IGCY++AL++FR MQ + Sbjct: 187 SWNGLLSGYARLGQMRKARELFEEMPDKSIVSWTVLISGYVGIGCYSEALEIFREMQMLD 246 Query: 56 MKPDEITIVSILPACAHL 3 ++PDE++++S+LPACA L Sbjct: 247 IEPDEVSVISVLPACAQL 264 Score = 78.2 bits (191), Expect = 2e-12 Identities = 52/194 (26%), Positives = 91/194 (46%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 LF ++ +I + ++ Y Y +A+ IF+++ PD+ + + AC Sbjct: 207 LFEEMPDKSIVSWTVLISGYVGIGCYSEALEIFREM-----QMLDIEPDEVSVISVLPAC 261 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 L L++GK IH K G ++ + NA+++MY KC + A Q+FE+M +RDV+SW+ Sbjct: 262 AQLGVLEIGKWIHIYSDKNGLSRSTGVCNALIEMYAKCGCIDPALQLFEKMMERDVVSWS 321 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 +I G A G+ +A+++FR MQ ++P Sbjct: 322 TMIGGLANHGKAH-------------------------------EAIELFRDMQRTRIEP 350 Query: 47 DEITIVSILPACAH 6 + IT + +L AC H Sbjct: 351 NGITFLGLLSACIH 364 >ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 568 Score = 241 bits (616), Expect = 8e-62 Identities = 116/196 (59%), Positives = 149/196 (76%) Frame = -2 Query: 590 LLFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKA 411 LLF Q++ PNIF YNAI+RTY HN + AI++F Q+L H + S FPDKFTFP IK+ Sbjct: 63 LLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTH--STNSVFPDKFTFPFVIKS 120 Query: 410 CCGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISW 231 C G+LC LG Q+H V KFG + + +NA++DMY K +LT+A +VFEEMS RDVISW Sbjct: 121 CTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISW 180 Query: 230 NIIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMK 51 N +I G+ +LGQM AR +FD MP +TIVSWTT+I+GY R+GCY DALDVFR MQ VG++ Sbjct: 181 NSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIE 240 Query: 50 PDEITIVSILPACAHL 3 PDEI+I+++LPACA L Sbjct: 241 PDEISIIAVLPACAQL 256 Score = 74.3 bits (181), Expect = 2e-11 Identities = 51/194 (26%), Positives = 90/194 (46%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 LF+ + I + ++ Y Y A+ +F+++ PD+ + + AC Sbjct: 199 LFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREM-----QMVGIEPDEISIIAVLPAC 253 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 L L++GK IH K G + + I NA+++MY KC + +A +F+++ ++DVISW+ Sbjct: 254 AQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWS 313 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 +I G A G+ GY +A+ +F M V + P Sbjct: 314 TMIGGLANHGK------------------------GY-------EAIQLFEEMCKVRVAP 342 Query: 47 DEITIVSILPACAH 6 +EIT + +L AC+H Sbjct: 343 NEITFLGVLLACSH 356 >ref|XP_006408981.1| hypothetical protein EUTSA_v10001958mg [Eutrema salsugineum] gi|557110137|gb|ESQ50434.1| hypothetical protein EUTSA_v10001958mg [Eutrema salsugineum] Length = 531 Score = 239 bits (610), Expect = 4e-61 Identities = 110/195 (56%), Positives = 147/195 (75%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 LF Q+ PN+FLYN+I+R Y HN LY I I++Q+LR K PD+FTFP K+C Sbjct: 64 LFKQVANPNVFLYNSIIRAYAHNSLYRDVIRIYRQLLR----KSLDLPDRFTFPFMFKSC 119 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 + LGKQ H ++CKFGP + V +NA++DMYMK D+L DAH+VF+EMS RDVISWN Sbjct: 120 ASIGSYYLGKQAHGHLCKFGPKFHLVTENALIDMYMKFDDLADAHKVFDEMSVRDVISWN 179 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 ++SG+ARLGQM++A+ +F MP KTIVSWT +ISGYT IGCY +A++ FR MQ G++P Sbjct: 180 SLLSGYARLGQMKKAKALFHSMPDKTIVSWTAMISGYTGIGCYVEAMEFFRGMQLAGIEP 239 Query: 47 DEITIVSILPACAHL 3 DEI+++S+LP+CAHL Sbjct: 240 DEISLISVLPSCAHL 254 Score = 80.1 bits (196), Expect = 4e-13 Identities = 51/195 (26%), Positives = 90/195 (46%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 LF+ + I + A++ YT Y++A+ F+ + PD+ + + +C Sbjct: 197 LFHSMPDKTIVSWTAMISGYTGIGCYVEAMEFFRGM-----QLAGIEPDEISLISVLPSC 251 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 L L+LGK IH + G + + + NA+++MY KC ++ A ++F M +DVISW+ Sbjct: 252 AHLGSLELGKWIHMYADRKGFLKQTGVCNALIEMYSKCGLISQAIELFSRMKRKDVISWS 311 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 +ISG+A G + A++ F MQ +KP Sbjct: 312 TMISGYAHHGNAHQ-------------------------------AIETFNEMQRAKVKP 340 Query: 47 DEITIVSILPACAHL 3 + IT + +L AC+H+ Sbjct: 341 NGITFLGLLSACSHV 355 >ref|XP_006360941.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540-like [Solanum tuberosum] Length = 536 Score = 238 bits (608), Expect = 7e-61 Identities = 110/196 (56%), Positives = 149/196 (76%) Frame = -2 Query: 590 LLFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKA 411 LLF Q+ PN +LYN+I+R YTH YI I ++KQ++ + PD++T+P I++ Sbjct: 67 LLFKQVEDPNNYLYNSIIRAYTHKQRYISCINVYKQMMIC-----TISPDEYTYPFVIRS 121 Query: 410 CCGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISW 231 C +L +D+G+Q H +V KFG ++VI N+++DMY+KCD + DAH VF+EMSDRDVISW Sbjct: 122 CSAILRVDVGEQFHVHVWKFGLYYSNVIANSLLDMYVKCDRMRDAHMVFDEMSDRDVISW 181 Query: 230 NIIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMK 51 N +I GH RL Q+R+AR +FD+MP K+IVSWT +ISGYT+ GCY DALDVFRRMQ VG+K Sbjct: 182 NSLICGHVRLRQVRKARALFDVMPDKSIVSWTAMISGYTKTGCYGDALDVFRRMQMVGVK 241 Query: 50 PDEITIVSILPACAHL 3 PD I++VS+LPACA L Sbjct: 242 PDWISLVSVLPACAQL 257 Score = 94.0 bits (232), Expect = 3e-17 Identities = 59/194 (30%), Positives = 95/194 (48%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 LF+ + +I + A++ YT Y A+ +F+++ PD + + AC Sbjct: 200 LFDVMPDKSIVSWTAMISGYTKTGCYGDALDVFRRM-----QMVGVKPDWISLVSVLPAC 254 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 L L+LGK IH K+G + + + NA+M+MY KC ++ +A Q+F +MS+RDVISW+ Sbjct: 255 AQLGALELGKWIHFYAEKYGYLRKTSVCNALMEMYAKCGSVNEAWQLFNQMSERDVISWS 314 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 +I G A G+ + +AL +F MQ ++P Sbjct: 315 TMIGGLANHGRAQ-------------------------------EALKLFHEMQRSAVEP 343 Query: 47 DEITIVSILPACAH 6 +EIT V +L ACAH Sbjct: 344 NEITFVGLLCACAH 357 >ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 517 Score = 238 bits (606), Expect = 1e-60 Identities = 113/199 (56%), Positives = 144/199 (72%), Gaps = 4/199 (2%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSA----FPDKFTFPIT 420 LF ++I PN +LYNA++R THN +Y I +KQ+LR + ++ PD+FTFP Sbjct: 42 LFKEVIDPNAYLYNAMIRACTHNSMYSLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFV 101 Query: 419 IKACCGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDV 240 +KAC L +LGKQ+H KFG S+ + +NA++DMY KCDNL DAH +F+EM +R Sbjct: 102 VKACARLGLHNLGKQVHAQFFKFGKKSHLITENALIDMYTKCDNLLDAHNLFDEMHERGA 161 Query: 239 ISWNIIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFV 60 ISWN IISGH RLGQMRRAR +FD MP +TIVSWT +ISGYTRIG Y DALDVFR MQ Sbjct: 162 ISWNGIISGHVRLGQMRRARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIA 221 Query: 59 GMKPDEITIVSILPACAHL 3 G++PDE +I+S+LPACA L Sbjct: 222 GIEPDEASIISVLPACAKL 240 Score = 90.5 bits (223), Expect = 3e-16 Identities = 58/194 (29%), Positives = 93/194 (47%) Frame = -2 Query: 587 LFNQIIQPNIFLYNAILRTYTHNHLYIQAITIFKQILRHPQAKPSAFPDKFTFPITIKAC 408 LF+++ I + AI+ YT YI A+ +F+++ PD+ + + AC Sbjct: 183 LFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREM-----QIAGIEPDEASIISVLPAC 237 Query: 407 CGLLCLDLGKQIHCNVCKFGPISNSVIDNAIMDMYMKCDNLTDAHQVFEEMSDRDVISWN 228 L L+ GK IH + G + + I NA+++MY KC + A Q+F++M RDVISW+ Sbjct: 238 AKLGALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWS 297 Query: 227 IIISGHARLGQMRRARTMFDLMPYKTIVSWTTLISGYTRIGCYTDALDVFRRMQFVGMKP 48 +I G A G++R +A+ +F RM+ +KP Sbjct: 298 TMIGGLANHGKVR-------------------------------EAIAIFERMKQTNIKP 326 Query: 47 DEITIVSILPACAH 6 + IT V +L ACAH Sbjct: 327 NGITFVGLLSACAH 340