BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00048010
         (762 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39452.3| unnamed protein product [Vitis vinifera]              299   8e-79
ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi...   299   8e-79
ref|XP_002511627.1| pentatricopeptide repeat-containing protein,...   298   2e-78
ref|XP_007052225.1| Tetratricopeptide repeat (TPR)-like superfam...   293   6e-77
ref|XP_004510607.1| PREDICTED: pentatricopeptide repeat-containi...   288   1e-75
ref|XP_007219156.1| hypothetical protein PRUPE_ppa016282mg, part...   287   3e-75
gb|EXB97272.1| hypothetical protein L484_024133 [Morus notabilis]     286   5e-75
ref|XP_007138408.1| hypothetical protein PHAVU_009G206300g [Phas...   281   1e-73
ref|XP_003622527.1| Pentatricopeptide repeat-containing protein ...   280   5e-73
ref|XP_006592806.1| PREDICTED: pentatricopeptide repeat-containi...   277   3e-72
ref|XP_003539494.2| PREDICTED: pentatricopeptide repeat-containi...   277   3e-72
ref|XP_006592805.1| PREDICTED: pentatricopeptide repeat-containi...   277   3e-72
ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   275   1e-71
ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containi...   275   1e-71
ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Popu...   270   3e-70
ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containi...   268   1e-69
ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containi...   266   8e-69
ref|NP_171708.1| pentatricopeptide repeat-containing protein [Ar...   262   1e-67
gb|EXB37231.1| hypothetical protein L484_020290 [Morus notabilis]     261   2e-67
ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containi...   259   9e-67

>emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  299 bits (765), Expect = 8e-79
 Identities = 152/218 (69%), Positives = 175/218 (80%), Gaps = 4/218 (1%)
 Frame = +3

Query: 120 INNHPWSPNLESFLSS---SLSKNTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTYFE 290
           IN  PWS  L+S L+    SLSK TVLQ L+LIRTP+KALHFF W + KGF+HN+Q+YF 
Sbjct: 73  INTEPWSHELQSSLAELAPSLSKTTVLQTLQLIRTPAKALHFFRWVEAKGFTHNEQSYFL 132

Query: 291 MLEILGXXXXXXXXXXXXXSIESKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMK 470
           M+EILG             SIE KSGG VKL DRFFNSLIRSYG AGL QESIKVF  MK
Sbjct: 133 MIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMK 192

Query: 471 SVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEMLST-GVSPDIFTFNILIRGFCLNSMV 647
            + VSPSV+TFNSLLSI+L+RGRT+MAK+LFDEML T GV+PD +TFNILIRGFC+NSMV
Sbjct: 193 EIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMV 252

Query: 648 EDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKVRIA 761
           ++GF FFKEM +F+CDPDVVTYNTLV GLCRAGKV+IA
Sbjct: 253 DEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIA 290



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           FN LIR +    ++ E    F  M   +  P V+T+N+L+  + R G+  +A  +   M+
Sbjct: 239 FNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMV 298

Query: 576 --STGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGK 749
             S  +SP++ T+  LIRG+C+   + +      EM      P+ +TYNTL+ GLC A K
Sbjct: 299 KKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQK 358

Query: 750 V 752
           +
Sbjct: 359 L 359



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           + +LIR Y     + E++ + + M S  + P+ IT+N+L+  +    + +  K++ + M+
Sbjct: 311 YTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMV 370

Query: 576 STG-VSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKV 752
             G   PD  T N LI+  C    +E+ F  F++M + R  PD  TY+ LV  LC+ G  
Sbjct: 371 GDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDF 430

Query: 753 RIA 761
           R A
Sbjct: 431 RRA 433



 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
 Frame = +3

Query: 399 NSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML- 575
           N+LI+++   G ++E+  VF  M  +RV P   T++ L+  + +RG    A++ FDE+  
Sbjct: 383 NTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAE 442

Query: 576 ------STGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLC 737
                   G  P +  +N +    C N   +   R F+++ + R   D  +Y TL+ G C
Sbjct: 443 KEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMK-RGTQDPPSYKTLILGHC 501

Query: 738 RAG 746
           R G
Sbjct: 502 REG 504


>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  299 bits (765), Expect = 8e-79
 Identities = 152/218 (69%), Positives = 175/218 (80%), Gaps = 4/218 (1%)
 Frame = +3

Query: 120 INNHPWSPNLESFLSS---SLSKNTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTYFE 290
           IN  PWS  L+S L+    SLSK TVLQ L+LIRTP+KALHFF W + KGF+HN+Q+YF 
Sbjct: 73  INTEPWSHELQSSLAELAPSLSKTTVLQTLQLIRTPAKALHFFRWVEAKGFTHNEQSYFL 132

Query: 291 MLEILGXXXXXXXXXXXXXSIESKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMK 470
           M+EILG             SIE KSGG VKL DRFFNSLIRSYG AGL QESIKVF  MK
Sbjct: 133 MIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMK 192

Query: 471 SVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEMLST-GVSPDIFTFNILIRGFCLNSMV 647
            + VSPSV+TFNSLLSI+L+RGRT+MAK+LFDEML T GV+PD +TFNILIRGFC+NSMV
Sbjct: 193 EIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMV 252

Query: 648 EDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKVRIA 761
           ++GF FFKEM +F+CDPDVVTYNTLV GLCRAGKV+IA
Sbjct: 253 DEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIA 290



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           FN LIR +    ++ E    F  M   +  P V+T+N+L+  + R G+  +A  +   M+
Sbjct: 239 FNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMV 298

Query: 576 --STGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGK 749
             S  +SP++ T+  LIRG+C+   + +      EM      P+ +TYNTL+ GLC A K
Sbjct: 299 KKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQK 358

Query: 750 V 752
           +
Sbjct: 359 L 359



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           + +LIR Y     + E++ + + M S  + P+ IT+N+L+  +    + +  K++ + M+
Sbjct: 311 YTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMV 370

Query: 576 STG-VSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKV 752
             G   PD  T N LI+  C    +E+ F  F++M + R  PD  TY+ LV  LC+ G  
Sbjct: 371 GDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDF 430

Query: 753 RIA 761
           R A
Sbjct: 431 RRA 433



 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
 Frame = +3

Query: 399 NSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML- 575
           N+LI+++   G ++E+  VF  M  +RV P   T++ L+  + +RG    A++ FDE+  
Sbjct: 383 NTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAE 442

Query: 576 ------STGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLC 737
                   G  P +  +N +    C N   +   R F+++ + R   D  +Y TL+ G C
Sbjct: 443 KEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMK-RGTQDPPSYKTLILGHC 501

Query: 738 RAG 746
           R G
Sbjct: 502 REG 504


>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1163

 Score =  298 bits (762), Expect = 2e-78
 Identities = 152/218 (69%), Positives = 177/218 (81%), Gaps = 4/218 (1%)
 Frame = +3

Query: 120 INNHPWSPNLESFLSS---SLSKNTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTYFE 290
           IN+ PWS  LES LSS   S+SK TV + LRLI+TPSKAL FFNWA   GF+HNDQ+YF 
Sbjct: 64  INSKPWSTELESSLSSLSPSISKTTVFEVLRLIKTPSKALQFFNWAPELGFTHNDQSYFL 123

Query: 291 MLEILGXXXXXXXXXXXXXSIESKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMK 470
           MLEILG             SI+ +S GTVKL+DRFFNSLIRSYG+AGL QES++VF+ MK
Sbjct: 124 MLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMK 183

Query: 471 SVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEMLST-GVSPDIFTFNILIRGFCLNSMV 647
           SV VSPSV+TFNSLL I+L+RGRTNMA+ +FDEMLST GV+PD +TFNILIRGFC NSMV
Sbjct: 184 SVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMV 243

Query: 648 EDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKVRIA 761
           ++GFRFFKEM +F+CDPD+VTYNTLV GLCRAGKV IA
Sbjct: 244 DEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIA 281



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 8/191 (4%)
 Frame = +3

Query: 204 LIRTPSKA------LHFFNWAQTKGFSHNDQTYFEMLEILGXXXXXXXXXXXXXSIESKS 365
           LIR+  KA      +  FN  ++ G S +  T+  +L IL               + S  
Sbjct: 162 LIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTY 221

Query: 366 GGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTN 545
           G T       FN LIR + +  ++ E  + F  M   +  P ++T+N+L+  + R G+ N
Sbjct: 222 GVTPDTYT--FNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVN 279

Query: 546 MAKKLFDEML--STGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNT 719
           +A  + + M+  ST ++PD+ T+  L+RG+C+   +++    F+EM      P+ +TYNT
Sbjct: 280 IAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNT 339

Query: 720 LVHGLCRAGKV 752
           L+ GLC   K+
Sbjct: 340 LIKGLCEVQKI 350



 Score = 63.5 bits (153), Expect = 8e-08
 Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           + +L+R Y     I E++ VF  M S  + P+ IT+N+L+  +    + +  K++F+  L
Sbjct: 302 YTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGAL 361

Query: 576 -STGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAG 746
              G  PD  T N L+   C    + D    F++M      PD  TY+ L+  LC+ G
Sbjct: 362 GGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRG 419



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 7/129 (5%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRV-------SPSVITFNSLLSIMLRRGRTNMAK 554
           ++ LIR+  Q G  + + ++F  +    +       +P V  + S+   + R G+T  A+
Sbjct: 408 YSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAE 467

Query: 555 KLFDEMLSTGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGL 734
           ++F +++  G   D  +F ILI+G C     E G+     M +    PD+ TY +L+ GL
Sbjct: 468 RVFRQLMKRGTQ-DPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGL 526

Query: 735 CRAGKVRIA 761
            + G+  +A
Sbjct: 527 LQKGEPLVA 535


>ref|XP_007052225.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao] gi|508704486|gb|EOX96382.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative [Theobroma cacao]
          Length = 724

 Score =  293 bits (749), Expect = 6e-77
 Identities = 149/218 (68%), Positives = 175/218 (80%), Gaps = 4/218 (1%)
 Frame = +3

Query: 120 INNHPWSPNLESFLSS---SLSKNTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTYFE 290
           IN+ PWS  LES LSS   SLSK TVLQ LRLI+ PSKAL FF+W Q  GF HN Q++F 
Sbjct: 68  INSTPWSSELESSLSSLSPSLSKTTVLQTLRLIKAPSKALQFFDWVQKMGFPHNAQSFFL 127

Query: 291 MLEILGXXXXXXXXXXXXXSIESKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMK 470
           +LEILG             SIE +S G+VKL+D+FFNSLIRSYG+AGL QESIKVF  MK
Sbjct: 128 ILEILGKERNLNAARNLLLSIEKRSNGSVKLEDQFFNSLIRSYGKAGLFQESIKVFETMK 187

Query: 471 SVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEMLST-GVSPDIFTFNILIRGFCLNSMV 647
            + VSPSV++FN+LL I+L+RGRTNMAK +FDEMLST GVSPD++TFNILIRGFC+NSMV
Sbjct: 188 GIGVSPSVVSFNNLLMILLKRGRTNMAKSVFDEMLSTYGVSPDVYTFNILIRGFCMNSMV 247

Query: 648 EDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKVRIA 761
           ++GFRFFKEM +F+CDPDVVTYNT+V GLCRAGKV IA
Sbjct: 248 DEGFRFFKEMERFKCDPDVVTYNTIVDGLCRAGKVGIA 285



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 36/115 (31%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           FN LIR +    ++ E  + F  M+  +  P V+T+N+++  + R G+  +A+ +   M 
Sbjct: 234 FNILIRGFCMNSMVDEGFRFFKEMERFKCDPDVVTYNTIVDGLCRAGKVGIARNVVRGMS 293

Query: 576 --STGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGL 734
             S  ++P++ T+  L+RG+C+   +++    FKEM   R  P+ +TYNTL+ GL
Sbjct: 294 KKSLDLNPNVVTYTTLVRGYCMKQEIDEALVVFKEMISRRLRPNRITYNTLIKGL 348



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           + +L+R Y     I E++ VF  M S R+ P+ IT+N+L+  +         K++ + M 
Sbjct: 306 YTTLVRGYCMKQEIDEALVVFKEMISRRLRPNRITYNTLIKGLSEVHEYEKIKEILEGMG 365

Query: 576 STG-VSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAG 746
             G   PD  T N LI   C    +++    FK M +    PD  TY+ ++  LC+ G
Sbjct: 366 EDGRFVPDTCTLNTLINAHCNAENMDEALNVFKRMSELNVLPDSATYSVIIRSLCQRG 423


>ref|XP_004510607.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cicer arietinum]
          Length = 740

 Score =  288 bits (738), Expect = 1e-75
 Identities = 146/215 (67%), Positives = 167/215 (77%), Gaps = 1/215 (0%)
 Frame = +3

Query: 120 INNHPWSPNLESFLSSSLSKNTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTYFEMLE 299
           IN  PWS  L S  ++SLSK TVLQ LR I+ PSKA HFFNW    GFSHN Q+YF MLE
Sbjct: 70  INFKPWSNGLLSSFTNSLSKTTVLQTLRHIKFPSKAFHFFNWVHENGFSHNSQSYFIMLE 129

Query: 300 ILGXXXXXXXXXXXXXSIESKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMKSVR 479
           ILG             SIE +S G VKL+DRFFNSLIRSYG+AGL +ESIK+F  MKS+ 
Sbjct: 130 ILGREKNLNVARNFLFSIEKRSNGEVKLEDRFFNSLIRSYGEAGLFKESIKLFQTMKSIG 189

Query: 480 VSPSVITFNSLLSIMLRRGRTNMAKKLFDEMLST-GVSPDIFTFNILIRGFCLNSMVEDG 656
           VSPSVITFNS+L I+LRRGRTNMAK++FDEMLST GV+PD +T+NILIRGFC NSMV++G
Sbjct: 190 VSPSVITFNSVLLILLRRGRTNMAKEVFDEMLSTYGVTPDTYTYNILIRGFCKNSMVDEG 249

Query: 657 FRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKVRIA 761
           F FFKEM  F CDPDVVTYNTLV GLCRAGK++ A
Sbjct: 250 FHFFKEMTSFNCDPDVVTYNTLVDGLCRAGKIKTA 284



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           +N LIR + +  ++ E    F  M S    P V+T+N+L+  + R G+   A  L + M 
Sbjct: 233 YNILIRGFCKNSMVDEGFHFFKEMTSFNCDPDVVTYNTLVDGLCRAGKIKTAHNLVNGMS 292

Query: 576 ST--GVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGK 749
               G+SPD+ T+  LIRG+C+   V +     +EM      P++VTYNTL+ GLC A K
Sbjct: 293 KKCGGLSPDVVTYTTLIRGYCMKQEVNEALVILEEMNGRGLKPNIVTYNTLIKGLCEAQK 352



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 30/118 (25%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           + +LIR Y     + E++ +   M    + P+++T+N+L+  +    + +  K + ++M 
Sbjct: 305 YTTLIRGYCMKQEVNEALVILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKDILEQMK 364

Query: 576 S-TGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAG 746
             +G  PD  TFN LI   C    +++ F+ F+ M + +   D  +Y+ L+  LC+ G
Sbjct: 365 GDSGAIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLQVSADSASYSVLIRSLCQIG 422


>ref|XP_007219156.1| hypothetical protein PRUPE_ppa016282mg, partial [Prunus persica]
           gi|462415618|gb|EMJ20355.1| hypothetical protein
           PRUPE_ppa016282mg, partial [Prunus persica]
          Length = 721

 Score =  287 bits (734), Expect = 3e-75
 Identities = 145/218 (66%), Positives = 172/218 (78%), Gaps = 4/218 (1%)
 Frame = +3

Query: 120 INNHPWSPNLESFLS---SSLSKNTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTYFE 290
           +N + WS  LES LS   SSLSK TV Q L LI+TP KAL FF W +  GFSHNDQ+YF 
Sbjct: 56  VNTNTWSSELESSLSTISSSLSKTTVHQTLHLIKTPHKALQFFKWVEVMGFSHNDQSYFL 115

Query: 291 MLEILGXXXXXXXXXXXXXSIESKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMK 470
           MLEILG             SIE +S G VKL+DRFFNSLIR+YG+AGL QESIK+F+ MK
Sbjct: 116 MLEILGRARNLNAARNLLFSIEKRSNGAVKLEDRFFNSLIRNYGRAGLFQESIKLFTTMK 175

Query: 471 SVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEMLST-GVSPDIFTFNILIRGFCLNSMV 647
           S+ VSPSV++FNSLLSI+L++GRTNMAK ++DEMLS  GV+PD +TFNILIRGFC+NSMV
Sbjct: 176 SLGVSPSVVSFNSLLSILLKKGRTNMAKNVYDEMLSMYGVTPDTYTFNILIRGFCMNSMV 235

Query: 648 EDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKVRIA 761
           ++G+RFFK+M  FRCDPDV+TYNTLV GLCRAGKV IA
Sbjct: 236 DEGYRFFKDMSGFRCDPDVITYNTLVDGLCRAGKVEIA 273



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           FN LIR +    ++ E  + F  M   R  P VIT+N+L+  + R G+  +A  + + M 
Sbjct: 222 FNILIRGFCMNSMVDEGYRFFKDMSGFRCDPDVITYNTLVDGLCRAGKVEIAHNVVNGMS 281

Query: 576 --STGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGK 749
             S  ++P++ T+  LIRG+C+   ++      +EM      P+  TYNTL+ GLC A K
Sbjct: 282 KRSGDLTPNVVTYTTLIRGYCVKQEIDKALSILEEMTTRGLKPNGFTYNTLIKGLCEAQK 341

Query: 750 V 752
           +
Sbjct: 342 L 342



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 7/182 (3%)
 Frame = +3

Query: 222 KALHFFNWAQTKGFSHNDQTYFEMLEILGXXXXXXXXXXXXXSIESKSGGTVKLQDRFFN 401
           KAL       T+G   N  TY  +++  G                +  GG        FN
Sbjct: 309 KALSILEEMTTRGLKPNGFTYNTLIK--GLCEAQKLDKIKEIFEGTMIGGEFTPDTCTFN 366

Query: 402 SLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDE---- 569
           +L+ S+  AG + E++KVF+ M  ++V P   T++ L+  + +RG    A++LFDE    
Sbjct: 367 TLMHSHCNAGNLDEALKVFAKMSELKVPPDSATYSVLICSLCQRGDYPRAEELFDELSKK 426

Query: 570 ---MLSTGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCR 740
              +   G  P + ++N +      N   +     F+++ + R   D ++Y TL+ G C+
Sbjct: 427 EILLRDDGCKPLVASYNPIFGYLSSNGKTQKAEEVFRQLMR-RGTQDPLSYKTLIMGNCK 485

Query: 741 AG 746
            G
Sbjct: 486 EG 487



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
 Frame = +3

Query: 357 SKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRG 536
           SK  G +      + +LIR Y     I +++ +   M +  + P+  T+N+L+  +    
Sbjct: 281 SKRSGDLTPNVVTYTTLIRGYCVKQEIDKALSILEEMTTRGLKPNGFTYNTLIKGLCEAQ 340

Query: 537 RTNMAKKLFD-EMLSTGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTY 713
           + +  K++F+  M+    +PD  TFN L+   C    +++  + F +M + +  PD  TY
Sbjct: 341 KLDKIKEIFEGTMIGGEFTPDTCTFNTLMHSHCNAGNLDEALKVFAKMSELKVPPDSATY 400

Query: 714 NTLVHGLCRAG 746
           + L+  LC+ G
Sbjct: 401 SVLICSLCQRG 411


>gb|EXB97272.1| hypothetical protein L484_024133 [Morus notabilis]
          Length = 786

 Score =  286 bits (732), Expect = 5e-75
 Identities = 145/219 (66%), Positives = 169/219 (77%), Gaps = 5/219 (2%)
 Frame = +3

Query: 120 INNHPWSPNLESFLSS----SLSKNTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTYF 287
           IN +PWS +LES LSS     LSK TVLQ LRLI +PSKA  FF W    GFSHNDQ+ F
Sbjct: 115 INTNPWSTDLESSLSSLFPFPLSKTTVLQTLRLITSPSKAFQFFKWVPQMGFSHNDQSCF 174

Query: 288 EMLEILGXXXXXXXXXXXXXSIESKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMM 467
            MLEILG             SIE KS G+VKL+DRFFNSLIRSYG AGL QES+K+FS M
Sbjct: 175 MMLEILGRSRNLNAARNFLFSIEKKSNGSVKLEDRFFNSLIRSYGNAGLFQESVKLFSTM 234

Query: 468 KSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEMLST-GVSPDIFTFNILIRGFCLNSM 644
           K + ++PSV+TFNSLL ++L+RGRTNMA+ +FDEML T GV PD FTFN+LIRGFC+NSM
Sbjct: 235 KELAIAPSVVTFNSLLLVLLKRGRTNMARNVFDEMLGTYGVEPDTFTFNVLIRGFCMNSM 294

Query: 645 VEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKVRIA 761
           V++GF FFKEM +F+C+PDVVTYNTLV GLCRAGKV IA
Sbjct: 295 VDEGFHFFKEMSRFKCEPDVVTYNTLVDGLCRAGKVDIA 333



 Score = 80.5 bits (197), Expect = 6e-13
 Identities = 39/121 (32%), Positives = 67/121 (55%), Gaps = 2/121 (1%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           FN LIR +    ++ E    F  M   +  P V+T+N+L+  + R G+ ++A+ +   M 
Sbjct: 282 FNVLIRGFCMNSMVDEGFHFFKEMSRFKCEPDVVTYNTLVDGLCRAGKVDIARNVVKGMS 341

Query: 576 --STGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGK 749
             S  ++P+I T+  LI+G+C    +++     KEM +    P+ +TYNTL+ GLC A K
Sbjct: 342 KKSVDLNPNIVTYTTLIKGYCGKQEIDEALLVLKEMTERGLKPNGITYNTLIKGLCEAQK 401

Query: 750 V 752
           +
Sbjct: 402 L 402



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDE-- 569
           FN+LI ++ QAG + E++KVF  M  ++V     T+++L+  + +RG    A++LFD+  
Sbjct: 425 FNTLIHTHCQAGRLDEALKVFEKMLELQVLQDSATYSALIRSLCQRGDYIRAEELFDKLS 484

Query: 570 -----MLSTGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGL 734
                +   G  P +  +N +    C N   +   R F+++ + R   D  +Y TL+ G 
Sbjct: 485 DKEILLSDDGCRPIVAAYNPMFEHLCRNGKTKKAERVFRQLMK-RGTQDPPSYKTLIMGH 543

Query: 735 CRAG 746
           CR G
Sbjct: 544 CREG 547



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMM--KSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDE 569
           +N+L+    +AG +  +  V   M  KSV ++P+++T+ +L+     +   + A  +  E
Sbjct: 317 YNTLVDGLCRAGKVDIARNVVKGMSKKSVDLNPNIVTYTTLIKGYCGKQEIDEALLVLKE 376

Query: 570 MLSTGVSPDIFTFNILIRGFCLNSMVEDGFRFFK-EMPQFRCDPDVVTYNTLVHGLCRAG 746
           M   G+ P+  T+N LI+G C    ++D  +     M +    P+  T+NTL+H  C+AG
Sbjct: 377 MTERGLKPNGITYNTLIKGLCEAQKLDDVRKILDGTMRRGEFVPNTCTFNTLIHTHCQAG 436

Query: 747 KV 752
           ++
Sbjct: 437 RL 438


>ref|XP_007138408.1| hypothetical protein PHAVU_009G206300g [Phaseolus vulgaris]
           gi|561011495|gb|ESW10402.1| hypothetical protein
           PHAVU_009G206300g [Phaseolus vulgaris]
          Length = 728

 Score =  281 bits (720), Expect = 1e-73
 Identities = 143/215 (66%), Positives = 167/215 (77%), Gaps = 1/215 (0%)
 Frame = +3

Query: 120 INNHPWSPNLESFLSSSLSKNTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTYFEMLE 299
           IN+ PWS  L S L + LSK TVL+ LRLI+ PSKALHFF WAQ  GF H  Q+YF ML+
Sbjct: 58  INSKPWSNALVSPLPTPLSKTTVLRTLRLIKDPSKALHFFKWAQQSGFPHTAQSYFIMLQ 117

Query: 300 ILGXXXXXXXXXXXXXSIESKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMKSVR 479
           ILG             SIE KS GTVKL DRFFN+LIRSY +AGL +ES+K+F  MKSV 
Sbjct: 118 ILGRHRNLNVARNLLFSIEKKSNGTVKLGDRFFNTLIRSYAEAGLFKESLKLFQTMKSVA 177

Query: 480 VSPSVITFNSLLSIMLRRGRTNMAKKLFDEMLST-GVSPDIFTFNILIRGFCLNSMVEDG 656
           VSPSV+TFNS+LSI+L+RGRTNMAK+++DEML T GV+PDI T+N+LIRGFC NSMV++G
Sbjct: 178 VSPSVVTFNSVLSILLKRGRTNMAKEVYDEMLHTYGVTPDICTYNVLIRGFCKNSMVDEG 237

Query: 657 FRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKVRIA 761
           FRFF EM    CDPD+VTYNTLV GLCRAGKVRIA
Sbjct: 238 FRFFNEMATVNCDPDIVTYNTLVDGLCRAGKVRIA 272



 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 39/121 (32%), Positives = 73/121 (60%), Gaps = 2/121 (1%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           +N LIR + +  ++ E  + F+ M +V   P ++T+N+L+  + R G+  +A+ L + M 
Sbjct: 221 YNVLIRGFCKNSMVDEGFRFFNEMATVNCDPDIVTYNTLVDGLCRAGKVRIARNLVNAMT 280

Query: 576 ST--GVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGK 749
               G++P++ T+  LIRG+C+   V++     +EM     +P+++TYNTL+ GLC A K
Sbjct: 281 KKCEGLNPNVVTYTTLIRGYCMKQEVDEALVVLEEMSGRGIEPNMITYNTLIKGLCEAHK 340

Query: 750 V 752
           +
Sbjct: 341 L 341



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           + +LIR Y     + E++ V   M    + P++IT+N+L+  +    + +  K +   M 
Sbjct: 293 YTTLIRGYCMKQEVDEALVVLEEMSGRGIEPNMITYNTLIKGLCEAHKLDKMKDVLKWMK 352

Query: 576 STG-VSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKV 752
             G  SPD FTFN +I   C    +++  + F+ M +F+   D  +Y+TL+  LC+ G  
Sbjct: 353 DNGGFSPDTFTFNTIIHSHCCAGNLDEALKVFESMKKFQVRMDSASYSTLIRSLCQKGDY 412

Query: 753 RIA 761
            +A
Sbjct: 413 DMA 415



 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 34/124 (27%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           FN++I S+  AG + E++KVF  MK  +V     ++++L+  + ++G  +MA+ LFDE+ 
Sbjct: 364 FNTIIHSHCCAGNLDEALKVFESMKKFQVRMDSASYSTLIRSLCQKGDYDMAELLFDELF 423

Query: 576 -------STGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGL 734
                  + G  P +  ++ L +  C +   +   R  +++ + R   D  +Y TL+ G 
Sbjct: 424 EKEILLCNFGSKPLVAAYSPLFQYLCEHGKSKKAERVMRQLMK-RGTQDAQSYKTLIMGH 482

Query: 735 CRAG 746
           C+ G
Sbjct: 483 CKEG 486


>ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355497542|gb|AES78745.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 721

 Score =  280 bits (715), Expect = 5e-73
 Identities = 146/256 (57%), Positives = 176/256 (68%), Gaps = 3/256 (1%)
 Frame = +3

Query: 3   SSSPRTLAPTLPVKQPNNE--DQNQKHXXXXXXXXXXXXXXINNHPWSPNLESFLSSSLS 176
           SSSP     ++  ++ NNE   Q Q                IN  PWS  L S  ++SLS
Sbjct: 25  SSSPLRCFCSVQTQKINNEVEQQQQPRSRNNSKTAKTIANLINYKPWSDELLSSFTTSLS 84

Query: 177 KNTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTYFEMLEILGXXXXXXXXXXXXXSIE 356
           K TV Q LR I+ P+KA  FFNW   KGFSHN QTYF MLEILG             SIE
Sbjct: 85  KTTVFQTLRHIKVPTKAFLFFNWIHEKGFSHNPQTYFIMLEILGREKNLNIARNFLYSIE 144

Query: 357 SKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRG 536
            +S G VKL+DRFFNSLIRSYG+AGL +ES+K+F  MK + VSP V+TFNS+L ++L+RG
Sbjct: 145 KRSNGEVKLEDRFFNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRG 204

Query: 537 RTNMAKKLFDEMLST-GVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTY 713
           RTNMAK+++DEML T GV PD +T+NILIRGFC NSMV++GF FFKEM  F CDPDVVTY
Sbjct: 205 RTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTY 264

Query: 714 NTLVHGLCRAGKVRIA 761
           NTLV GLCRAGK+++A
Sbjct: 265 NTLVDGLCRAGKIKVA 280



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
 Frame = +3

Query: 375 VKLQDRFFNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAK 554
           VK     +N LIR + +  ++ E    F  M S    P V+T+N+L+  + R G+  +A 
Sbjct: 222 VKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAH 281

Query: 555 KLFDEMLST--GVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVH 728
            L + M      +SPD+ T+  LIRG+C    V++     +EM      P++VTYNTL+ 
Sbjct: 282 NLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIK 341

Query: 729 GLCRAGK 749
           GLC A K
Sbjct: 342 GLCEAQK 348



 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           + +LIR Y +   + E++ +   M    + P+++T+N+L+  +    + +  K++ ++M 
Sbjct: 301 YTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMK 360

Query: 576 STGVS-PDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAG 746
             G S PD  TFN LI   C    +++ F+ F+ M +     D  +Y+ L+  LC+ G
Sbjct: 361 GDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKG 418


>ref|XP_006592806.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like isoform X3 [Glycine max]
          Length = 734

 Score =  277 bits (708), Expect = 3e-72
 Identities = 141/215 (65%), Positives = 167/215 (77%), Gaps = 1/215 (0%)
 Frame = +3

Query: 120 INNHPWSPNLESFLSSSLSKNTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTYFEMLE 299
           IN+ P+S  L S L  ++SK TVL+ LRLI+ PSKAL FF W Q KGFSH  ++YF MLE
Sbjct: 61  INSKPFSNGLLSSLLITISKTTVLRTLRLIKDPSKALRFFKWTQQKGFSHTPESYFIMLE 120

Query: 300 ILGXXXXXXXXXXXXXSIESKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMKSVR 479
           ILG             SIE  S GTVKL+DRFFNSLIRSY +AGL +ES+K+F  MKS+ 
Sbjct: 121 ILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIA 180

Query: 480 VSPSVITFNSLLSIMLRRGRTNMAKKLFDEMLST-GVSPDIFTFNILIRGFCLNSMVEDG 656
           VSPSV+TFNSL+SI+L+RGRTNMAK+++DEML T GVSPD  T+N+LIRGFC NSMV++G
Sbjct: 181 VSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEG 240

Query: 657 FRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKVRIA 761
           FRFF+EM  F CD DVVTYNTLV GLCRAGKVRIA
Sbjct: 241 FRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIA 275



 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEM- 572
           +N LIR + +  ++ E  + F  M+S      V+T+N+L+  + R G+  +A+ L + M 
Sbjct: 224 YNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMG 283

Query: 573 -LSTGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGK 749
               G++P++ T+  LIRG+C+   VE+     +EM      P+++TYNTLV GLC A K
Sbjct: 284 KKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHK 343

Query: 750 V 752
           +
Sbjct: 344 L 344



 Score = 73.6 bits (179), Expect = 7e-11
 Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           + +LIR Y     ++E++ V   M S  + P++IT+N+L+  +    + +  K + + M 
Sbjct: 296 YTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMK 355

Query: 576 STG-VSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKV 752
           S G  SPD FTFN +I   C    +++  + F+ M +FR   D  +Y+TL+  LC+ G  
Sbjct: 356 SDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDY 415

Query: 753 RIA 761
            +A
Sbjct: 416 DMA 418



 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 7/136 (5%)
 Frame = +3

Query: 360 KSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGR 539
           KS G        FN++I  +  AG + E++KVF  MK  R+     ++++L+  + ++G 
Sbjct: 355 KSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGD 414

Query: 540 TNMAKKLFDEMLST-------GVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDP 698
            +MA++LFDE+          G  P   ++N +    C +   +   R  +++ + R   
Sbjct: 415 YDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMK-RGTQ 473

Query: 699 DVVTYNTLVHGLCRAG 746
           D  +Y T++ G C+ G
Sbjct: 474 DPQSYTTVIMGHCKEG 489


>ref|XP_003539494.2| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like isoform X1 [Glycine max]
          Length = 741

 Score =  277 bits (708), Expect = 3e-72
 Identities = 141/215 (65%), Positives = 167/215 (77%), Gaps = 1/215 (0%)
 Frame = +3

Query: 120 INNHPWSPNLESFLSSSLSKNTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTYFEMLE 299
           IN+ P+S  L S L  ++SK TVL+ LRLI+ PSKAL FF W Q KGFSH  ++YF MLE
Sbjct: 59  INSKPFSNGLLSSLLITISKTTVLRTLRLIKDPSKALRFFKWTQQKGFSHTPESYFIMLE 118

Query: 300 ILGXXXXXXXXXXXXXSIESKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMKSVR 479
           ILG             SIE  S GTVKL+DRFFNSLIRSY +AGL +ES+K+F  MKS+ 
Sbjct: 119 ILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIA 178

Query: 480 VSPSVITFNSLLSIMLRRGRTNMAKKLFDEMLST-GVSPDIFTFNILIRGFCLNSMVEDG 656
           VSPSV+TFNSL+SI+L+RGRTNMAK+++DEML T GVSPD  T+N+LIRGFC NSMV++G
Sbjct: 179 VSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEG 238

Query: 657 FRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKVRIA 761
           FRFF+EM  F CD DVVTYNTLV GLCRAGKVRIA
Sbjct: 239 FRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIA 273



 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEM- 572
           +N LIR + +  ++ E  + F  M+S      V+T+N+L+  + R G+  +A+ L + M 
Sbjct: 222 YNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMG 281

Query: 573 -LSTGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGK 749
               G++P++ T+  LIRG+C+   VE+     +EM      P+++TYNTLV GLC A K
Sbjct: 282 KKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHK 341

Query: 750 V 752
           +
Sbjct: 342 L 342



 Score = 73.6 bits (179), Expect = 7e-11
 Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           + +LIR Y     ++E++ V   M S  + P++IT+N+L+  +    + +  K + + M 
Sbjct: 294 YTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMK 353

Query: 576 STG-VSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKV 752
           S G  SPD FTFN +I   C    +++  + F+ M +FR   D  +Y+TL+  LC+ G  
Sbjct: 354 SDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDY 413

Query: 753 RIA 761
            +A
Sbjct: 414 DMA 416



 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 7/136 (5%)
 Frame = +3

Query: 360 KSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGR 539
           KS G        FN++I  +  AG + E++KVF  MK  R+     ++++L+  + ++G 
Sbjct: 353 KSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGD 412

Query: 540 TNMAKKLFDEMLST-------GVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDP 698
            +MA++LFDE+          G  P   ++N +    C +   +   R  +++ + R   
Sbjct: 413 YDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMK-RGTQ 471

Query: 699 DVVTYNTLVHGLCRAG 746
           D  +Y T++ G C+ G
Sbjct: 472 DPQSYTTVIMGHCKEG 487


>ref|XP_006592805.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like isoform X2 [Glycine max]
          Length = 743

 Score =  277 bits (708), Expect = 3e-72
 Identities = 141/215 (65%), Positives = 167/215 (77%), Gaps = 1/215 (0%)
 Frame = +3

Query: 120 INNHPWSPNLESFLSSSLSKNTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTYFEMLE 299
           IN+ P+S  L S L  ++SK TVL+ LRLI+ PSKAL FF W Q KGFSH  ++YF MLE
Sbjct: 61  INSKPFSNGLLSSLLITISKTTVLRTLRLIKDPSKALRFFKWTQQKGFSHTPESYFIMLE 120

Query: 300 ILGXXXXXXXXXXXXXSIESKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMKSVR 479
           ILG             SIE  S GTVKL+DRFFNSLIRSY +AGL +ES+K+F  MKS+ 
Sbjct: 121 ILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIA 180

Query: 480 VSPSVITFNSLLSIMLRRGRTNMAKKLFDEMLST-GVSPDIFTFNILIRGFCLNSMVEDG 656
           VSPSV+TFNSL+SI+L+RGRTNMAK+++DEML T GVSPD  T+N+LIRGFC NSMV++G
Sbjct: 181 VSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEG 240

Query: 657 FRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKVRIA 761
           FRFF+EM  F CD DVVTYNTLV GLCRAGKVRIA
Sbjct: 241 FRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIA 275



 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEM- 572
           +N LIR + +  ++ E  + F  M+S      V+T+N+L+  + R G+  +A+ L + M 
Sbjct: 224 YNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMG 283

Query: 573 -LSTGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGK 749
               G++P++ T+  LIRG+C+   VE+     +EM      P+++TYNTLV GLC A K
Sbjct: 284 KKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHK 343

Query: 750 V 752
           +
Sbjct: 344 L 344



 Score = 73.6 bits (179), Expect = 7e-11
 Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           + +LIR Y     ++E++ V   M S  + P++IT+N+L+  +    + +  K + + M 
Sbjct: 296 YTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMK 355

Query: 576 STG-VSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKV 752
           S G  SPD FTFN +I   C    +++  + F+ M +FR   D  +Y+TL+  LC+ G  
Sbjct: 356 SDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDY 415

Query: 753 RIA 761
            +A
Sbjct: 416 DMA 418



 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 7/136 (5%)
 Frame = +3

Query: 360 KSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGR 539
           KS G        FN++I  +  AG + E++KVF  MK  R+     ++++L+  + ++G 
Sbjct: 355 KSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGD 414

Query: 540 TNMAKKLFDEMLST-------GVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDP 698
            +MA++LFDE+          G  P   ++N +    C +   +   R  +++ + R   
Sbjct: 415 YDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMK-RGTQ 473

Query: 699 DVVTYNTLVHGLCRAG 746
           D  +Y T++ G C+ G
Sbjct: 474 DPQSYTTVIMGHCKEG 489


>ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  275 bits (703), Expect = 1e-71
 Identities = 140/218 (64%), Positives = 171/218 (78%), Gaps = 4/218 (1%)
 Frame = +3

Query: 120 INNHPWSPNLESFLSS---SLSKNTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTYFE 290
           IN+ PWS +LES L+S   SLS+ TVLQ L  +R  SKAL FFNWAQ  G++H +Q+YF 
Sbjct: 57  INSKPWSSDLESSLASLSPSLSQTTVLQTLGFLRDTSKALQFFNWAQEMGYTHTEQSYFS 116

Query: 291 MLEILGXXXXXXXXXXXXXSIESKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMK 470
           MLEILG             SIE +S G VKL+ RFFNSL+R++ +AGL QESIKVF++MK
Sbjct: 117 MLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMK 176

Query: 471 SVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEMLST-GVSPDIFTFNILIRGFCLNSMV 647
           S  VSPSV+TFNSLL+I+L+RGRTNMAKK++DEMLST GV+PD FTFNILIRGFC+N MV
Sbjct: 177 SHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMV 236

Query: 648 EDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKVRIA 761
           +DGFR F ++ +F C+PDVVTYNTLV GLCRAGKV +A
Sbjct: 237 DDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVA 274



 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEM- 572
           FN LIR +   G++ +  ++F+ +      P V+T+N+L+  + R G+  +A  +   M 
Sbjct: 223 FNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMG 282

Query: 573 -LSTGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGK 749
             S  ++P++ T+  LIRG+C    +E     F+EM       + +TYNTL+ GLC A K
Sbjct: 283 KKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARK 342



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           + +LIR Y     I++++ VF  M +  +  + IT+N+L+  +    +    K + +   
Sbjct: 295 YTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTA 354

Query: 576 STGV-SPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAG 746
             G  SPD  TFN L+   C    ++D  + F+ M + +  PD  TY+ LV  LC+ G
Sbjct: 355 GDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGG 412



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
 Frame = +3

Query: 210 RTPSKALHFFNWAQTKGFSHNDQTYFEMLEILGXXXXXXXXXXXXXSIESKSG-GTVKLQ 386
           R   KAL  F     +G   N+ TY  +++ L               +E  +G GT    
Sbjct: 306 REIEKALAVFEEMVNQGLKANNITYNTLIKGL---CEARKFEKIKDILEGTAGDGTFSPD 362

Query: 387 DRFFNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFD 566
              FN+L+  +  AG + +++KVF  M  +++ P   T+++L+  + + G    A+ L D
Sbjct: 363 TCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLD 422

Query: 567 EML-------STGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLV 725
           ++L         G  P +  +N + +  C     +   + F+++ + R   D  +Y TL+
Sbjct: 423 KLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMR-RGTQDPPSYKTLI 481

Query: 726 HGLCRAG 746
            G C+ G
Sbjct: 482 MGHCKEG 488


>ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  275 bits (703), Expect = 1e-71
 Identities = 140/218 (64%), Positives = 171/218 (78%), Gaps = 4/218 (1%)
 Frame = +3

Query: 120 INNHPWSPNLESFLSS---SLSKNTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTYFE 290
           IN+ PWS +LES L+S   SLS+ TVLQ L  +R  SKAL FFNWAQ  G++H +Q+YF 
Sbjct: 57  INSKPWSSDLESSLASLSPSLSQTTVLQTLGFLRDTSKALQFFNWAQEMGYTHTEQSYFS 116

Query: 291 MLEILGXXXXXXXXXXXXXSIESKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMK 470
           MLEILG             SIE +S G VKL+ RFFNSL+R++ +AGL QESIKVF++MK
Sbjct: 117 MLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMK 176

Query: 471 SVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEMLST-GVSPDIFTFNILIRGFCLNSMV 647
           S  VSPSV+TFNSLL+I+L+RGRTNMAKK++DEMLST GV+PD FTFNILIRGFC+N MV
Sbjct: 177 SHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMV 236

Query: 648 EDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKVRIA 761
           +DGFR F ++ +F C+PDVVTYNTLV GLCRAGKV +A
Sbjct: 237 DDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVA 274



 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEM- 572
           FN LIR +   G++ +  ++F+ +      P V+T+N+L+  + R G+  +A  +   M 
Sbjct: 223 FNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMG 282

Query: 573 -LSTGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGK 749
             S  ++P++ T+  LIRG+C    +E     F+EM       + +TYNTL+ GLC A K
Sbjct: 283 KKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARK 342



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           + +LIR Y     I++++ VF  M +  +  + IT+N+L+  +    +    K + +   
Sbjct: 295 YTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTA 354

Query: 576 STGV-SPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAG 746
             G  SPD  TFN L+   C    ++D  + F+ M + +  PD  TY+ LV  LC+ G
Sbjct: 355 GDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGG 412



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 8/187 (4%)
 Frame = +3

Query: 210 RTPSKALHFFNWAQTKGFSHNDQTYFEMLEILGXXXXXXXXXXXXXSIESKSG-GTVKLQ 386
           R   KAL  F     +G   N+ TY  +++ L               +E  +G GT    
Sbjct: 306 REIEKALAVFEEMVNQGLKANNITYNTLIKGL---CEARKFEKIKDILEGTAGDGTFSPD 362

Query: 387 DRFFNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFD 566
              FN+L+  +  AG + +++KVF  M  +++ P   T+++L+  + + G    A+ L D
Sbjct: 363 TCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLD 422

Query: 567 EML-------STGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLV 725
           ++L         G  P +  +N + +  C     +   + F+++ + R   D  +Y TL+
Sbjct: 423 KLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMR-RGTQDPPSYKTLI 481

Query: 726 HGLCRAG 746
            G C+ G
Sbjct: 482 MGHCKEG 488


>ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Populus trichocarpa]
           gi|550323558|gb|ERP53036.1| hypothetical protein
           POPTR_0014s05550g [Populus trichocarpa]
          Length = 728

 Score =  270 bits (691), Expect = 3e-70
 Identities = 138/218 (63%), Positives = 164/218 (75%), Gaps = 4/218 (1%)
 Frame = +3

Query: 120 INNHPWSPNLESFL---SSSLSKNTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTYFE 290
           IN+ PWS  LES L   S S+SK T  Q LR I +P KA  FFNWA   GF+H+ ++YF 
Sbjct: 69  INSKPWSTELESSLFSLSPSISKTTFFQVLRFIASPPKAFEFFNWASRNGFAHDSRSYFM 128

Query: 291 MLEILGXXXXXXXXXXXXXSIESKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMK 470
           ML+ILG             SIE +S G+VK++DRF N+L+RSYG AGL  E+IK+FS+MK
Sbjct: 129 MLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMK 188

Query: 471 SVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEMLST-GVSPDIFTFNILIRGFCLNSMV 647
           S  VSPSVITFNSLL I+L+RGRTNMA  +FDEM  T GV+PD +TFNILIRGFC NSMV
Sbjct: 189 SSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMV 248

Query: 648 EDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKVRIA 761
           ++GFRFFKEM +F C+PDVVTYNTLV GLCRAGKVRIA
Sbjct: 249 DEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIA 286



 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 4/194 (2%)
 Frame = +3

Query: 180 NTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTYFEMLEILGXXXXXXXXXXXXXSIES 359
           NT+L+        ++A+  F+  ++ G S +  T+  +L IL              S+  
Sbjct: 165 NTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLIL----LKRGRTNMAHSVFD 220

Query: 360 KSGGT--VKLQDRFFNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRR 533
           +  GT  V      FN LIR + +  ++ E  + F  M      P V+T+N+L+  + R 
Sbjct: 221 EMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRA 280

Query: 534 GRTNMAKKLFDEMLST--GVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVV 707
           G+  +A  +   M+     +SPD+ T+  L+RG+C+   +++    F+EM      P+ +
Sbjct: 281 GKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDI 340

Query: 708 TYNTLVHGLCRAGK 749
           TYNTL+ GLC   K
Sbjct: 341 TYNTLIKGLCEVQK 354



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           + +L+R Y     I E++ VF  M S  + P+ IT+N+L+  +    + +  K++    +
Sbjct: 307 YTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAV 366

Query: 576 S-TGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAG 746
              G  PD  T+N L+   C     ++  + FK+M + +  PD  TY+ L+  LC+ G
Sbjct: 367 GGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRG 424



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDE-- 569
           +N+L+ +   AG   E++K+F  MK ++V P   T++ L+  + +RG    A++LFD+  
Sbjct: 378 YNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLS 437

Query: 570 -----MLSTGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGL 734
                +   G +P +  +N +    C N       R F+++ + +   D  +Y TL+ G 
Sbjct: 438 DEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMK-KGTQDPPSYKTLIIGH 496

Query: 735 CRAG 746
           C+ G
Sbjct: 497 CKEG 500


>ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 718

 Score =  268 bits (686), Expect = 1e-69
 Identities = 135/219 (61%), Positives = 163/219 (74%), Gaps = 5/219 (2%)
 Frame = +3

Query: 120 INNHPWSPNLESFLSS----SLSKNTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTYF 287
           IN +PWS +LES LSS    SLS  TVL  LR I+ P KAL+FFNW Q  GF H  Q+Y 
Sbjct: 63  INTNPWSSHLESSLSSLTQPSLSHTTVLHTLRFIKIPFKALYFFNWTQKMGFQHTHQSYL 122

Query: 288 EMLEILGXXXXXXXXXXXXXSIESKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMM 467
            ML++LG             SI  +S GTV LQDR+FN+LI+SYG+AGL QES+KVF +M
Sbjct: 123 LMLQLLGSSRSLNSARNFLLSIPRRSNGTVPLQDRYFNTLIQSYGKAGLFQESLKVFKVM 182

Query: 468 KSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEMLST-GVSPDIFTFNILIRGFCLNSM 644
           KS+ +SPSV+TFNSL SI+L+RGRT M  +LFDEML T G  PD++TFNILIRGFC+NSM
Sbjct: 183 KSLGISPSVVTFNSLFSILLKRGRTGMVYELFDEMLKTFGAKPDVYTFNILIRGFCMNSM 242

Query: 645 VEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKVRIA 761
           V+ GFRFFKEM +  C+PDV+TYNT+V GLCRAGKV IA
Sbjct: 243 VDKGFRFFKEMERHECEPDVITYNTIVDGLCRAGKVEIA 281



 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           FN LIR +    ++ +  + F  M+     P VIT+N+++  + R G+  +A  +   M+
Sbjct: 230 FNILIRGFCMNSMVDKGFRFFKEMERHECEPDVITYNTIVDGLCRAGKVEIAHNVLKGMV 289

Query: 576 STG--VSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRA 743
             G  +SP++ ++  L+RG+C    VE     F+EM      P  +TYNTLV GLC A
Sbjct: 290 KRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDCGLKPTSITYNTLVQGLCEA 347



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           + +L+R Y +   ++ ++ VF  M    + P+ IT+N+L+  +    R +  K++ +  L
Sbjct: 302 YTTLVRGYCEKQEVERALDVFEEMIDCGLKPTSITYNTLVQGLCEAKRFDRIKEILEGTL 361

Query: 576 -STGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAG 746
            S G+ PD  TFN LI   C    +++  + F+ M   +  PD  TY+ L+   C+ G
Sbjct: 362 GSGGLIPDTCTFNTLITFHCNVGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKG 419



 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 7/124 (5%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           FN+LI  +   G + E++KVF  M  ++V P   T++ L+    ++G  + A+KLFD+++
Sbjct: 373 FNTLITFHCNVGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKGYFDRAEKLFDDLM 432

Query: 576 -------STGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGL 734
                    G +P I  +N +   FC     +   + F+++ + R   D   Y  L+ G 
Sbjct: 433 KKEILLRDDGCTPLIAAYNPMFEYFCKIGKTKKAEKVFRQLMR-RGTQDPFAYELLIMGH 491

Query: 735 CRAG 746
           C+ G
Sbjct: 492 CKEG 495


>ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Solanum lycopersicum]
          Length = 710

 Score =  266 bits (679), Expect = 8e-69
 Identities = 133/219 (60%), Positives = 163/219 (74%), Gaps = 5/219 (2%)
 Frame = +3

Query: 120 INNHPWSPNLESFLSS----SLSKNTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTYF 287
           IN +PWS +LES LSS    SLS  TVL  LR I+ PSKAL+FFNW Q  GF H  Q+Y 
Sbjct: 57  INTNPWSSHLESSLSSITQPSLSHTTVLHTLRFIKIPSKALYFFNWTQKMGFQHTHQSYL 116

Query: 288 EMLEILGXXXXXXXXXXXXXSIESKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMM 467
            ML++LG             SI  +S G V LQDR+FN+LI+SYG+AGL QES+KVF +M
Sbjct: 117 LMLQLLGSSRSLNSARNFLLSIPRRSNGAVPLQDRYFNTLIQSYGKAGLFQESLKVFKVM 176

Query: 468 KSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEMLST-GVSPDIFTFNILIRGFCLNSM 644
           KS+ +SPSV+TFNSL +I+L+RGRT M  +LFDEML T G  PD++TFNILIRGFC+NSM
Sbjct: 177 KSLGISPSVVTFNSLFTILLKRGRTGMVYELFDEMLKTFGAKPDVYTFNILIRGFCINSM 236

Query: 645 VEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKVRIA 761
           V+ GFRFFKEM +  C+P+V+TYNT+V GLCRAGKV IA
Sbjct: 237 VDKGFRFFKEMERHECEPNVITYNTIVDGLCRAGKVEIA 275



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           FN LIR +    ++ +  + F  M+     P+VIT+N+++  + R G+  +A  +   M 
Sbjct: 224 FNILIRGFCINSMVDKGFRFFKEMERHECEPNVITYNTIVDGLCRAGKVEIAHNVLKGMA 283

Query: 576 STG--VSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRA 743
             G  +SP++ ++  L+RG+C    VE     F+EM      P  +TYNTLV GLC A
Sbjct: 284 KRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDRGLKPTSITYNTLVQGLCEA 341



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           + +L+R Y +   ++ ++ VF  M    + P+ IT+N+L+  +    R +  K++ +  L
Sbjct: 296 YTTLVRGYCEKQEVERALDVFEEMIDRGLKPTSITYNTLVQGLCEAKRFDRIKEILEGTL 355

Query: 576 -STGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAG 746
            S G+ PD  TFN LI   C    +++  + F+ M   +  PD  TY+ L+   C+ G
Sbjct: 356 GSGGLIPDTCTFNTLITYHCNVGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKG 413



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 7/124 (5%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           FN+LI  +   G + E++KVF  M  ++V P   T++ L+    ++G  + A+KLFD+++
Sbjct: 367 FNTLITYHCNVGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKGYFDRAEKLFDDLM 426

Query: 576 -------STGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGL 734
                    G +P I  +N +   FC     +   + F+++ + R   D   Y  L+ G 
Sbjct: 427 KKEVLLRDDGCTPLIAAYNPMFEYFCKIGKTKKAEKVFRQLMR-RGTQDPFAYELLIRGH 485

Query: 735 CRAG 746
           C+ G
Sbjct: 486 CKEG 489



 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
 Frame = +3

Query: 375 VKLQDRFFNSLIRSYGQAGLIQESIKVFS--MMKSVRV-----SPSVITFNSLLSIMLRR 533
           VK     ++ LIRS+ Q G    + K+F   M K V +     +P +  +N +     + 
Sbjct: 395 VKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKEVLLRDDGCTPLIAAYNPMFEYFCKI 454

Query: 534 GRTNMAKKLFDEMLSTGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTY 713
           G+T  A+K+F +++  G   D F + +LIRG C      D       M +    P++V Y
Sbjct: 455 GKTKKAEKVFRQLMRRGTQ-DPFAYELLIRGHCKEGTFNDAHGLLVLMLRRDYVPNIVIY 513

Query: 714 NTLVHGLCRAGKVRIA 761
            +L+ GL +    ++A
Sbjct: 514 ESLIEGLLQKNDPKVA 529


>ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806399|sp|O81908.2|PPR2_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g02060, chloroplastic; Flags: Precursor
           gi|332189251|gb|AEE27372.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  262 bits (669), Expect = 1e-67
 Identities = 131/220 (59%), Positives = 162/220 (73%), Gaps = 6/220 (2%)
 Frame = +3

Query: 120 INNHPWSPNLESFLSS-----SLSKNTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTY 284
           +N++PWS  LES LSS     ++S+ TVLQ LRLI+ P+  L FF+W   KGFSH +Q++
Sbjct: 44  VNSNPWSDELESSLSSLHPSQTISRTTVLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSF 103

Query: 285 FEMLEILGXXXXXXXXXXXXXSIESKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSM 464
           F MLE LG             SIE +S G VKLQDR+FNSLIRSYG AGL QES+K+F  
Sbjct: 104 FLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQT 163

Query: 465 MKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEMLST-GVSPDIFTFNILIRGFCLNS 641
           MK + +SPSV+TFNSLLSI+L+RGRT MA  LFDEM  T GV+PD +TFN LI GFC NS
Sbjct: 164 MKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNS 223

Query: 642 MVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKVRIA 761
           MV++ FR FK+M  + C+PDVVTYNT++ GLCRAGKV+IA
Sbjct: 224 MVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIA 263



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 35/118 (29%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           FN+LI  + +  ++ E+ ++F  M+    +P V+T+N+++  + R G+  +A  +   ML
Sbjct: 212 FNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGML 271

Query: 576 --STGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRA 743
             +T V P++ ++  L+RG+C+   +++    F +M      P+ VTYNTL+ GL  A
Sbjct: 272 KKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEA 329


>gb|EXB37231.1| hypothetical protein L484_020290 [Morus notabilis]
          Length = 415

 Score =  261 bits (666), Expect = 2e-67
 Identities = 131/200 (65%), Positives = 155/200 (77%), Gaps = 1/200 (0%)
 Frame = +3

Query: 165 SSLSKNTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTYFEMLEILGXXXXXXXXXXXX 344
           S LSK TVLQ LRLI +P KA  FFNW    GFSHNDQ+ F MLEILG            
Sbjct: 41  SPLSKTTVLQTLRLITSPFKAFQFFNWVPQMGFSHNDQSCFMMLEILGRSRNLNAARNFL 100

Query: 345 XSIESKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIM 524
            SIE KS G+VKL+DRFFNSLIRSYG AGL QES+++FS M+ + +SPS+ TFNSLLS++
Sbjct: 101 FSIEKKSIGSVKLEDRFFNSLIRSYGNAGLFQESLELFSTMERLGISPSLATFNSLLSVL 160

Query: 525 LRRGRTNMAKKLFDEMLST-GVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPD 701
           L+RGRTNMA+ +FDE+L T GV  D FTFN+LIRGFC NSMV++GF FFKEM +F+C+PD
Sbjct: 161 LKRGRTNMARNVFDEILGTLGVESDTFTFNVLIRGFCTNSMVDEGFHFFKEMSRFKCEPD 220

Query: 702 VVTYNTLVHGLCRAGKVRIA 761
           VVTYNTL+ GLCRAGKV IA
Sbjct: 221 VVTYNTLIDGLCRAGKVDIA 240



 Score = 83.2 bits (204), Expect = 9e-14
 Identities = 49/179 (27%), Positives = 87/179 (48%), Gaps = 2/179 (1%)
 Frame = +3

Query: 222 KALHFFNWAQTKGFSHNDQTYFEMLEILGXXXXXXXXXXXXXSIESKSGGTVKLQDRFFN 401
           ++L  F+  +  G S +  T+  +L +L               I    G  V+     FN
Sbjct: 133 ESLELFSTMERLGISPSLATFNSLLSVLLKRGRTNMARNVFDEILGTLG--VESDTFTFN 190

Query: 402 SLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEMLST 581
            LIR +    ++ E    F  M   +  P V+T+N+L+  + R G+ ++A+ + + M   
Sbjct: 191 VLIRGFCTNSMVDEGFHFFKEMSRFKCEPDVVTYNTLIDGLCRAGKVDIARNVVEGMKKK 250

Query: 582 GV--SPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKV 752
           GV  +P++ T+  LIRG+C    +++     KEM +    P+ +T+NTL+ GLC A K+
Sbjct: 251 GVDLNPNVVTYTTLIRGYCGKQEIDEALLVLKEMTERGLKPNGITHNTLIKGLCEAQKL 309


>ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1128

 Score =  259 bits (661), Expect = 9e-67
 Identities = 129/218 (59%), Positives = 163/218 (74%), Gaps = 4/218 (1%)
 Frame = +3

Query: 120 INNHPWSPNLESFLSS---SLSKNTVLQCLRLIRTPSKALHFFNWAQTKGFSHNDQTYFE 290
           IN+ PWSP+L+S LSS   S+S  TV Q LR I+TPS+A+ FFNW ++ GFSH   +YF 
Sbjct: 58  INSTPWSPHLQSSLSSLSPSISTTTVSQTLRRIKTPSQAIKFFNWVESLGFSHTSHSYFT 117

Query: 291 MLEILGXXXXXXXXXXXXXSIESKSGGTVKLQDRFFNSLIRSYGQAGLIQESIKVFSMMK 470
           +LE+LG             SIE +S G VKL+D+FFNSLIRSYG AGL QE++ VF  MK
Sbjct: 118 ILELLGRNRNLNAARNFLFSIEKRSNGKVKLEDKFFNSLIRSYGAAGLFQEAVNVFKTMK 177

Query: 471 SVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEMLST-GVSPDIFTFNILIRGFCLNSMV 647
           S+ +S SV +FNSL S++L+RGRT+M + ++DEML   GV PD  TFNILIRGFC++SMV
Sbjct: 178 SMGISASVFSFNSLFSVLLKRGRTSMVRNVYDEMLGMYGVEPDTHTFNILIRGFCMSSMV 237

Query: 648 EDGFRFFKEMPQFRCDPDVVTYNTLVHGLCRAGKVRIA 761
           ++GF FFKEM +F+C+PDVVTYNTLV GLCR GKV IA
Sbjct: 238 DEGFWFFKEMERFKCEPDVVTYNTLVDGLCRDGKVEIA 275



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDEML 575
           FN LIR +  + ++ E    F  M+  +  P V+T+N+L+  + R G+  +A+ +   M+
Sbjct: 224 FNILIRGFCMSSMVDEGFWFFKEMERFKCEPDVVTYNTLVDGLCRDGKVEIARNVVKGMM 283

Query: 576 STG-------VSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGL 734
           S         ++P++ T+  LIRG+C+   V++     +EM      P+ +TYNTL  GL
Sbjct: 284 SKSSEGELNQLNPNVVTYTTLIRGYCVRQEVDEALGVLEEMTSQGMKPNEITYNTLFKGL 343

Query: 735 CRAGKV 752
           C A ++
Sbjct: 344 CEAKRL 349



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFD-EM 572
           + +LIR Y     + E++ V   M S  + P+ IT+N+L   +    R +  K++ +  M
Sbjct: 301 YTTLIRGYCVRQEVDEALGVLEEMTSQGMKPNEITYNTLFKGLCEAKRLDKIKEILEGAM 360

Query: 573 LSTGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGLC 737
              G +PD  TFN L+   C+   +E+  + F+ M + +  PD  TY+ L+   C
Sbjct: 361 RGEGFTPDTCTFNTLMHSHCIAGNLEEALKVFRMMSELKVPPDSATYSVLIRSWC 415



 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
 Frame = +3

Query: 396 FNSLIRSYGQAGLIQESIKVFSMMKSVRVSPSVITFNSLLSIMLRRGRTNMAKKLFDE-- 569
           FN+L+ S+  AG ++E++KVF MM  ++V P   T++ L+     R   + A++LFDE  
Sbjct: 372 FNTLMHSHCIAGNLEEALKVFRMMSELKVPPDSATYSVLIRSWCERRDYSKAEELFDELS 431

Query: 570 -----MLSTGVSPDIFTFNILIRGFCLNSMVEDGFRFFKEMPQFRCDPDVVTYNTLVHGL 734
                +   G +P + ++  +    C N   +     F+++ + R   D  ++ TL+ G 
Sbjct: 432 KKQILLSDCGCTPIVASYKPIFEYLCSNGRTKKADEVFRQLLK-RGTQDPPSFKTLIMGH 490

Query: 735 CRAG 746
           CR G
Sbjct: 491 CREG 494