BLASTX nr result
ID: Akebia25_contig00047638
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00047638
(605 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put... 137 2e-30
emb|CBI40152.3| unnamed protein product [Vitis vinifera] 137 3e-30
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 137 3e-30
emb|CAN63470.1| hypothetical protein VITISV_024603 [Vitis vinifera] 137 3e-30
ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phas... 128 1e-27
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no... 127 2e-27
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 127 2e-27
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 125 7e-27
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 125 7e-27
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 124 2e-26
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub... 123 4e-26
ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|3555218... 122 6e-26
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag... 122 6e-26
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub... 122 1e-25
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub... 120 2e-25
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun... 120 2e-25
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 120 4e-25
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 119 9e-25
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub... 118 1e-24
gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinac... 117 3e-24
>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|590569189|ref|XP_007011000.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative isoform
1 [Theobroma cacao]
Length = 1788
Score = 137 bits (345), Expect = 2e-30
Identities = 60/81 (74%), Positives = 71/81 (87%)
Frame = +2
Query: 2 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 181
L+NVFT+HPDKA+KMG GVDYVMVSKHS+F DSRCFY+VSTDGR++DFSYRKC++NF+K
Sbjct: 1691 LENVFTHHPDKAIKMGAGVDYVMVSKHSNFPDSRCFYVVSTDGRKQDFSYRKCLDNFIKG 1750
Query: 182 KYPGMAESFNAKYLRKPPHSG 244
KYP MA+ F AKY RKP G
Sbjct: 1751 KYPDMADVFIAKYFRKPRFGG 1771
>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
Length = 1890
Score = 137 bits (344), Expect = 3e-30
Identities = 67/102 (65%), Positives = 78/102 (76%), Gaps = 6/102 (5%)
Frame = +2
Query: 2 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 181
LD VF HPDKAVKMGTG+DYVMVS+HSSF +SRCFY+VSTDG +EDFSYRKC+ENF+KE
Sbjct: 1781 LDKVFNNHPDKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKE 1840
Query: 182 KYPGMAESFNAKYLRKPPHSGGGRRFS------ENREQQM*P 289
KYP AE+F KY R+ P +GG R S NREQ + P
Sbjct: 1841 KYPDNAETFIGKYFRR-PRAGGNRERSVIPEDGGNREQSVVP 1881
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
Length = 1830
Score = 137 bits (344), Expect = 3e-30
Identities = 67/102 (65%), Positives = 78/102 (76%), Gaps = 6/102 (5%)
Frame = +2
Query: 2 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 181
LD VF HPDKAVKMGTG+DYVMVS+HSSF +SRCFY+VSTDG +EDFSYRKC+ENF+KE
Sbjct: 1721 LDKVFNNHPDKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKE 1780
Query: 182 KYPGMAESFNAKYLRKPPHSGGGRRFS------ENREQQM*P 289
KYP AE+F KY R+ P +GG R S NREQ + P
Sbjct: 1781 KYPDNAETFIGKYFRR-PRAGGNRERSVIPEDGGNREQSVVP 1821
>emb|CAN63470.1| hypothetical protein VITISV_024603 [Vitis vinifera]
Length = 1081
Score = 137 bits (344), Expect = 3e-30
Identities = 67/102 (65%), Positives = 78/102 (76%), Gaps = 6/102 (5%)
Frame = +2
Query: 2 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 181
LD VF HPDKAVKMGTG+DYVMVS+HSSF +SRCFY+VSTDG +EDFSYRKC+ENF+KE
Sbjct: 972 LDKVFNNHPDKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKE 1031
Query: 182 KYPGMAESFNAKYLRKPPHSGGGRRFS------ENREQQM*P 289
KYP AE+F KY R+ P +GG R S NREQ + P
Sbjct: 1032 KYPDNAETFIGKYFRR-PRAGGNRERSVIPEDGGNREQSVVP 1072
>ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris]
gi|561006762|gb|ESW05756.1| hypothetical protein
PHAVU_011G206900g [Phaseolus vulgaris]
Length = 2052
Score = 128 bits (322), Expect = 1e-27
Identities = 55/77 (71%), Positives = 67/77 (87%)
Frame = +2
Query: 2 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 181
L+NVF +HPDK KMG G+DYVMV+KHSSFQDSRCFY+V DGRREDFSYRKC++N++++
Sbjct: 1936 LENVFEHHPDKDTKMGAGIDYVMVNKHSSFQDSRCFYVVLKDGRREDFSYRKCLDNWIRK 1995
Query: 182 KYPGMAESFNAKYLRKP 232
KYP +AESF KY RKP
Sbjct: 1996 KYPELAESFFGKYFRKP 2012
>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
Length = 2054
Score = 127 bits (320), Expect = 2e-27
Identities = 54/87 (62%), Positives = 69/87 (79%)
Frame = +2
Query: 2 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 181
+DNVF YHPDKA KMG+G+D++M+S+HSSFQDSRC Y+VSTDGR+EDFSYRKC+ N +K
Sbjct: 1935 IDNVFNYHPDKAAKMGSGIDHLMISRHSSFQDSRCLYVVSTDGRKEDFSYRKCLGNLIKS 1994
Query: 182 KYPGMAESFNAKYLRKPPHSGGGRRFS 262
++P +A+ F KY RKP G R S
Sbjct: 1995 RFPDVADEFLDKYFRKPKPGGNQDRIS 2021
>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1 [Solanum lycopersicum]
Length = 1632
Score = 127 bits (319), Expect = 2e-27
Identities = 53/78 (67%), Positives = 66/78 (84%)
Frame = +2
Query: 2 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 181
+D V YHPDKAVKMG G+DY+ VSKH++FQD+RCFY+VSTDG ++DFS RKC+ENFV+
Sbjct: 1534 IDTVLNYHPDKAVKMGAGLDYITVSKHTNFQDTRCFYVVSTDGAKQDFSTRKCLENFVRS 1593
Query: 182 KYPGMAESFNAKYLRKPP 235
KYP AE+FN KY +KPP
Sbjct: 1594 KYPDKAETFNEKYFKKPP 1611
>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
sativus]
Length = 1959
Score = 125 bits (315), Expect = 7e-27
Identities = 53/77 (68%), Positives = 66/77 (85%)
Frame = +2
Query: 2 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 181
L +VF +HPDKA KMG G+D+ MVS+HSSFQ+SRCFY+V+TDG +EDFSYRKC++NF+K
Sbjct: 1846 LQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKG 1905
Query: 182 KYPGMAESFNAKYLRKP 232
KYP +AE F AKY RKP
Sbjct: 1906 KYPDLAEMFVAKYFRKP 1922
>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
1-like [Cucumis sativus]
Length = 2019
Score = 125 bits (315), Expect = 7e-27
Identities = 53/77 (68%), Positives = 66/77 (85%)
Frame = +2
Query: 2 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 181
L +VF +HPDKA KMG G+D+ MVS+HSSFQ+SRCFY+V+TDG +EDFSYRKC++NF+K
Sbjct: 1906 LQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKG 1965
Query: 182 KYPGMAESFNAKYLRKP 232
KYP +AE F AKY RKP
Sbjct: 1966 KYPDLAEMFVAKYFRKP 1982
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 124 bits (311), Expect = 2e-26
Identities = 54/76 (71%), Positives = 66/76 (86%)
Frame = +2
Query: 2 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 181
LDNVF YHPDKAVKMG G+D+V VS+HS+FQ+SRCFYIVSTDG ++DFSYRKC+ENF+K
Sbjct: 1825 LDNVFHYHPDKAVKMGAGIDHVTVSRHSNFQESRCFYIVSTDGCKQDFSYRKCLENFIKG 1884
Query: 182 KYPGMAESFNAKYLRK 229
KYP +A+ F AKY +
Sbjct: 1885 KYPDLADEFIAKYFAR 1900
>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2082
Score = 123 bits (309), Expect = 4e-26
Identities = 53/81 (65%), Positives = 65/81 (80%)
Frame = +2
Query: 2 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 181
L+NVF +HPDK KMGTG+DYVMV+KHSSFQ+SRCFY+V DG +DFSYRKC+ N++ +
Sbjct: 1959 LENVFEHHPDKETKMGTGIDYVMVNKHSSFQESRCFYVVCKDGESKDFSYRKCLANYISK 2018
Query: 182 KYPGMAESFNAKYLRKPPHSG 244
KYP +AESF KY RKP G
Sbjct: 2019 KYPDLAESFLGKYFRKPRARG 2039
>ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|355521872|gb|AET02326.1|
Protein DCL [Medicago truncatula]
Length = 481
Score = 122 bits (307), Expect = 6e-26
Identities = 54/77 (70%), Positives = 64/77 (83%)
Frame = +2
Query: 2 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 181
L+NVF +HPDK KMG GVD+VMVSKHS+FQDSRC Y+V DG++EDFSYRKC+EN V++
Sbjct: 331 LENVFEHHPDKETKMGVGVDHVMVSKHSNFQDSRCLYVVLKDGKKEDFSYRKCLENLVRK 390
Query: 182 KYPGMAESFNAKYLRKP 232
KYP AESF KY RKP
Sbjct: 391 KYPETAESFCGKYFRKP 407
>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
subunit [Medicago truncatula]
Length = 2032
Score = 122 bits (307), Expect = 6e-26
Identities = 54/77 (70%), Positives = 64/77 (83%)
Frame = +2
Query: 2 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 181
L+NVF +HPDK KMG GVD+VMVSKHS+FQDSRC Y+V DG++EDFSYRKC+EN V++
Sbjct: 1882 LENVFEHHPDKETKMGVGVDHVMVSKHSNFQDSRCLYVVLKDGKKEDFSYRKCLENLVRK 1941
Query: 182 KYPGMAESFNAKYLRKP 232
KYP AESF KY RKP
Sbjct: 1942 KYPETAESFCGKYFRKP 1958
>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
Length = 2020
Score = 122 bits (305), Expect = 1e-25
Identities = 52/81 (64%), Positives = 65/81 (80%)
Frame = +2
Query: 2 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 181
L+NVF +HPDK KMG G+DYVMV+KHSSFQ+SRCFY+V DG+ +DFSYRKC+ N++ +
Sbjct: 1916 LENVFEHHPDKETKMGAGIDYVMVNKHSSFQESRCFYVVCKDGQSKDFSYRKCLANYISK 1975
Query: 182 KYPGMAESFNAKYLRKPPHSG 244
KYP +AESF KY RKP G
Sbjct: 1976 KYPDLAESFLGKYFRKPRARG 1996
>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
arietinum]
Length = 2263
Score = 120 bits (302), Expect = 2e-25
Identities = 57/103 (55%), Positives = 74/103 (71%), Gaps = 7/103 (6%)
Frame = +2
Query: 2 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 181
L+NVF +HPDK KMG G+D+VMVS+HS+FQ+SRCFY+V DG++EDFSYRKC+E+FV++
Sbjct: 2117 LENVFEHHPDKETKMGVGIDHVMVSRHSNFQESRCFYVVLKDGKKEDFSYRKCLESFVRK 2176
Query: 182 KYPGMAESFNAKYLRKP-------PHSGGGRRFSENREQQM*P 289
KY AESF KY RKP +SGG + + EQ P
Sbjct: 2177 KYADTAESFCGKYFRKPRPKRDQIANSGGEQTANPGGEQTATP 2219
>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
gi|462415343|gb|EMJ20080.1| hypothetical protein
PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 120 bits (302), Expect = 2e-25
Identities = 49/76 (64%), Positives = 65/76 (85%)
Frame = +2
Query: 2 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 181
LDNVF YHPDKA KMG G+D++ V++H SFQDSRCF++VSTDGR EDFSYRKC++N+++E
Sbjct: 1749 LDNVFNYHPDKAAKMGCGIDHLTVNRHGSFQDSRCFFVVSTDGRTEDFSYRKCLDNYIRE 1808
Query: 182 KYPGMAESFNAKYLRK 229
K+P +AE+F KY +
Sbjct: 1809 KFPDLAETFIGKYFSR 1824
>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
sinensis]
Length = 1865
Score = 120 bits (300), Expect = 4e-25
Identities = 55/97 (56%), Positives = 70/97 (72%)
Frame = +2
Query: 5 DNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKEK 184
DNVF YHPDKA+KMG G+D+ V KH SFQDSRC ++VSTDG ++DFSYRKC+E+F++ K
Sbjct: 1768 DNVFNYHPDKAMKMGAGIDHFKVDKHGSFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGK 1827
Query: 185 YPGMAESFNAKYLRKPPHSGGGRRFSENREQQM*P*P 295
YP + + F KY R+ P SGG NRE + P P
Sbjct: 1828 YPDLVDEFIGKYFRR-PRSGG------NREPSLPPVP 1857
>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
gi|557522591|gb|ESR33958.1| hypothetical protein
CICLE_v10004129mg [Citrus clementina]
Length = 1867
Score = 119 bits (297), Expect = 9e-25
Identities = 55/97 (56%), Positives = 69/97 (71%)
Frame = +2
Query: 5 DNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKEK 184
DNVF YHPDKA+KMG G+D+ V KH SFQDSRC ++VSTDG ++DFSYRKC+E+F++ K
Sbjct: 1770 DNVFNYHPDKAMKMGAGIDHFKVDKHGSFQDSRCLFVVSTDGSQQDFSYRKCLESFIRGK 1829
Query: 185 YPGMAESFNAKYLRKPPHSGGGRRFSENREQQM*P*P 295
YP + F KY R+ P SGG NRE + P P
Sbjct: 1830 YPEFVDEFIGKYFRR-PRSGG------NREPSLPPVP 1859
>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1991
Score = 118 bits (296), Expect = 1e-24
Identities = 47/77 (61%), Positives = 63/77 (81%)
Frame = +2
Query: 2 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 181
LD VF +HP+K KMG+G+DY V +H SFQ+SRC +++STDGR+EDFSYRKC++N +KE
Sbjct: 1895 LDKVFNFHPEKEAKMGSGIDYFTVDRHGSFQESRCLFVISTDGRKEDFSYRKCLQNMIKE 1954
Query: 182 KYPGMAESFNAKYLRKP 232
KYP +AE+FN KY +P
Sbjct: 1955 KYPELAEAFNDKYFSRP 1971
>gb|AAX12374.1| DNA-directed RNA polymerase alpha subunit [Spinacia oleracea]
Length = 1902
Score = 117 bits (292), Expect = 3e-24
Identities = 49/76 (64%), Positives = 62/76 (81%)
Frame = +2
Query: 2 LDNVFTYHPDKAVKMGTGVDYVMVSKHSSFQDSRCFYIVSTDGRREDFSYRKCMENFVKE 181
+DN+ YHPDKA K+G GVD++ V KHS+FQ+SRCFY+VSTDG+ DFSY KC+E FVK
Sbjct: 1792 IDNILNYHPDKAAKIGAGVDFITVKKHSNFQESRCFYVVSTDGKDTDFSYIKCIETFVKG 1851
Query: 182 KYPGMAESFNAKYLRK 229
KYP +AESF +KY R+
Sbjct: 1852 KYPSVAESFTSKYFRR 1867