BLASTX nr result
ID: Akebia25_contig00047472
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia25_contig00047472 (297 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha... 57 2e-06 emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia... 57 2e-06 gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas... 56 5e-06 >gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana] Length = 1392 Score = 57.4 bits (137), Expect = 2e-06 Identities = 25/64 (39%), Positives = 40/64 (62%) Frame = -3 Query: 202 TLFSNRFRKINEDGWHPHLGHPQQKIVYHLGDKKFIFFDSENKNDCICESCQLGISCRLP 23 T +S R + +++ WH LGHP ++++ HL K I + + N +CE+CQ+G CRLP Sbjct: 447 TYYSTRQQSSDDEVWHQRLGHPNKEVLQHLIKTKAIVVNKTSSN--MCEACQMGKVCRLP 504 Query: 22 FIPS 11 F+ S Sbjct: 505 FVAS 508 >emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana] gi|7267767|emb|CAB81170.1| retrotransposon like protein [Arabidopsis thaliana] Length = 1515 Score = 57.4 bits (137), Expect = 2e-06 Identities = 25/64 (39%), Positives = 40/64 (62%) Frame = -3 Query: 202 TLFSNRFRKINEDGWHPHLGHPQQKIVYHLGDKKFIFFDSENKNDCICESCQLGISCRLP 23 T +S R + +++ WH LGHP ++++ HL K I + + N +CE+CQ+G CRLP Sbjct: 444 TYYSTRQQSSDDEVWHQRLGHPNKEVLQHLIKTKAIVVNKTSSN--MCEACQMGKVCRLP 501 Query: 22 FIPS 11 F+ S Sbjct: 502 FVAS 505 >gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from Arabidopsis thaliana BAC gb|AF080119 and is a member of the reverse transcriptase family PF|00078 [Arabidopsis thaliana] Length = 1415 Score = 56.2 bits (134), Expect = 5e-06 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Frame = -3 Query: 226 YALDGEQYT-LFSNRFRKINEDGWHPHLGHPQQKIVYHLGDKKFIFFDSENKNDCICESC 50 Y L+ +++ L+SNR E+ WH LGH K + HL + K I ++++ +CE C Sbjct: 433 YVLENQEFVALYSNRQCAATEEVWHHRLGHANSKALQHLQNSKAIQI-NKSRTSPVCEPC 491 Query: 49 QLGISCRLPFIPSNN 5 Q+G S RLPF+ S++ Sbjct: 492 QMGKSSRLPFLISDS 506