BLASTX nr result

ID: Akebia25_contig00047472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00047472
         (297 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha...    57   2e-06
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia...    57   2e-06
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...    56   5e-06

>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
          Length = 1392

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/64 (39%), Positives = 40/64 (62%)
 Frame = -3

Query: 202 TLFSNRFRKINEDGWHPHLGHPQQKIVYHLGDKKFIFFDSENKNDCICESCQLGISCRLP 23
           T +S R +  +++ WH  LGHP ++++ HL   K I  +  + N  +CE+CQ+G  CRLP
Sbjct: 447 TYYSTRQQSSDDEVWHQRLGHPNKEVLQHLIKTKAIVVNKTSSN--MCEACQMGKVCRLP 504

Query: 22  FIPS 11
           F+ S
Sbjct: 505 FVAS 508


>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
           gi|7267767|emb|CAB81170.1| retrotransposon like protein
           [Arabidopsis thaliana]
          Length = 1515

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/64 (39%), Positives = 40/64 (62%)
 Frame = -3

Query: 202 TLFSNRFRKINEDGWHPHLGHPQQKIVYHLGDKKFIFFDSENKNDCICESCQLGISCRLP 23
           T +S R +  +++ WH  LGHP ++++ HL   K I  +  + N  +CE+CQ+G  CRLP
Sbjct: 444 TYYSTRQQSSDDEVWHQRLGHPNKEVLQHLIKTKAIVVNKTSSN--MCEACQMGKVCRLP 501

Query: 22  FIPS 11
           F+ S
Sbjct: 502 FVAS 505


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
           Arabidopsis thaliana BAC gb|AF080119 and is a member of
           the reverse transcriptase family PF|00078 [Arabidopsis
           thaliana]
          Length = 1415

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = -3

Query: 226 YALDGEQYT-LFSNRFRKINEDGWHPHLGHPQQKIVYHLGDKKFIFFDSENKNDCICESC 50
           Y L+ +++  L+SNR     E+ WH  LGH   K + HL + K I   ++++   +CE C
Sbjct: 433 YVLENQEFVALYSNRQCAATEEVWHHRLGHANSKALQHLQNSKAIQI-NKSRTSPVCEPC 491

Query: 49  QLGISCRLPFIPSNN 5
           Q+G S RLPF+ S++
Sbjct: 492 QMGKSSRLPFLISDS 506


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