BLASTX nr result
ID: Akebia25_contig00047177
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia25_contig00047177 (616 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas... 65 1e-08 ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A... 62 2e-07 gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas... 60 5e-07 ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596... 58 2e-06 emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694... 57 3e-06 ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260... 57 4e-06 emb|CAN66134.1| hypothetical protein VITISV_006848 [Vitis vinifera] 57 6e-06 gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 56 7e-06 emb|CAN83807.1| hypothetical protein VITISV_026962 [Vitis vinifera] 56 1e-05 >gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago truncatula] Length = 528 Score = 65.5 bits (158), Expect = 1e-08 Identities = 28/57 (49%), Positives = 41/57 (71%) Frame = +2 Query: 14 GFFKGSRGLR*GDPLSPSLFILAEEAFSKGLNSLLQNGKIERFASSRNSFIPSHLLF 184 G+F SRG+R GDPLSP LF LAE+ S+ L L++ GK+++ +RN +PSH+L+ Sbjct: 311 GYFSCSRGVRQGDPLSPLLFCLAEDVLSRSLTKLVEQGKLKQMRGTRNCLVPSHILY 367 >ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria vesca subsp. vesca] Length = 872 Score = 61.6 bits (148), Expect = 2e-07 Identities = 27/58 (46%), Positives = 42/58 (72%) Frame = +2 Query: 11 FGFFKGSRGLR*GDPLSPSLFILAEEAFSKGLNSLLQNGKIERFASSRNSFIPSHLLF 184 +G+F +G+R GDPLSP LF LAEE S+G++ L+ +G+++R S R + PS++LF Sbjct: 131 YGYFSCGQGVRQGDPLSPLLFCLAEEVLSRGISMLVSSGQVKRIHSPRGTLSPSYVLF 188 >gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago truncatula] Length = 642 Score = 60.1 bits (144), Expect = 5e-07 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 2/86 (2%) Frame = +2 Query: 14 GFFKGSRGLR*GDPLSPSLFILAEEAFSKGLNSLLQNGKIERFASSRNSFIPSHLLFRIS 193 GFF +RG+R GDPLSP LF + EE S+ ++ L G I+ A+SRN+ +P H F + Sbjct: 372 GFFNCNRGVRQGDPLSPLLFCIVEEVLSRSISILADKGLIDLIAASRNNCLPFH-CFYVD 430 Query: 194 NEAAVC--AISSQVLNK*LLDRVAWC 265 + C +SS ++ K L R A C Sbjct: 431 DLMVFCKAKMSSLIVLKSLFTRYADC 456 >ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum] Length = 1135 Score = 58.2 bits (139), Expect = 2e-06 Identities = 28/58 (48%), Positives = 40/58 (68%) Frame = +2 Query: 11 FGFFKGSRGLR*GDPLSPSLFILAEEAFSKGLNSLLQNGKIERFASSRNSFIPSHLLF 184 FGFF+ +RGL+ GDPLSP+LFI+A E S+GLNSL ++ + + S + SHL + Sbjct: 494 FGFFQSTRGLKQGDPLSPTLFIIAAEVLSRGLNSLFEDPDYIGYGMPKWSPVVSHLSY 551 >emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1| putative protein [Arabidopsis thaliana] Length = 1141 Score = 57.4 bits (137), Expect = 3e-06 Identities = 31/57 (54%), Positives = 38/57 (66%) Frame = +2 Query: 14 GFFKGSRGLR*GDPLSPSLFILAEEAFSKGLNSLLQNGKIERFASSRNSFIPSHLLF 184 GFFK ++GLR GDPLSP LF+LA E FSK LNS +G I R+ + SHL+F Sbjct: 620 GFFKSAKGLRQGDPLSPYLFVLAMEVFSKLLNSRFDSGYI-RYHPKASDLSISHLMF 675 >ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260201 [Solanum lycopersicum] Length = 1531 Score = 57.0 bits (136), Expect = 4e-06 Identities = 28/57 (49%), Positives = 36/57 (63%) Frame = +2 Query: 14 GFFKGSRGLR*GDPLSPSLFILAEEAFSKGLNSLLQNGKIERFASSRNSFIPSHLLF 184 GFF +RGL+ GDPLSP+LFI+ E FS+ LN L QN F+ +N +HL F Sbjct: 919 GFFHSTRGLKQGDPLSPALFIIGAEVFSRNLNLLYQNQLYRGFSMEKNGPQTNHLSF 975 >emb|CAN66134.1| hypothetical protein VITISV_006848 [Vitis vinifera] Length = 626 Score = 56.6 bits (135), Expect = 6e-06 Identities = 33/60 (55%), Positives = 37/60 (61%), Gaps = 3/60 (5%) Frame = +2 Query: 14 GFFKGSRGLR*GDPLSPSLFILAEEAFSKGLNSLLQNGKIERF---ASSRNSFIPSHLLF 184 GFF+ SRGLR GDPLSP LFI+A EA S L LQ G +E F A + SHLLF Sbjct: 322 GFFQRSRGLRQGDPLSPFLFIIAMEALSSILKRALQGGYLEGFMAGARGGEGVVVSHLLF 381 >gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] Length = 1213 Score = 56.2 bits (134), Expect = 7e-06 Identities = 31/57 (54%), Positives = 39/57 (68%) Frame = +2 Query: 14 GFFKGSRGLR*GDPLSPSLFILAEEAFSKGLNSLLQNGKIERFASSRNSFIPSHLLF 184 GFFK ++GLR GDPLSP LF+LA EAFS L+S ++G I + N I SHL+F Sbjct: 642 GFFKSTKGLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSI-SHLMF 697 >emb|CAN83807.1| hypothetical protein VITISV_026962 [Vitis vinifera] Length = 806 Score = 55.8 bits (133), Expect = 1e-05 Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 3/74 (4%) Frame = +2 Query: 14 GFFKGSRGLR*GDPLSPSLFILAEEAFSKGLNSLLQNGKIERFASSR---NSFIPSHLLF 184 GFF+ SRGLR GDPLSP LFI+A E S L LQ G +E F + + SHLLF Sbjct: 357 GFFQSSRGLRQGDPLSPFLFIIAMEVLSSILKRALQGGYLEGFMAGERGGEGVVVSHLLF 416 Query: 185 RISNEAAVCAISSQ 226 + + C S + Sbjct: 417 -VDDTLVFCDASKE 429