BLASTX nr result

ID: Akebia25_contig00047177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00047177
         (616 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...    65   1e-08
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...    62   2e-07
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...    60   5e-07
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596...    58   2e-06
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694...    57   3e-06
ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260...    57   4e-06
emb|CAN66134.1| hypothetical protein VITISV_006848 [Vitis vinifera]    57   6e-06
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        56   7e-06
emb|CAN83807.1| hypothetical protein VITISV_026962 [Vitis vinifera]    56   1e-05

>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 28/57 (49%), Positives = 41/57 (71%)
 Frame = +2

Query: 14  GFFKGSRGLR*GDPLSPSLFILAEEAFSKGLNSLLQNGKIERFASSRNSFIPSHLLF 184
           G+F  SRG+R GDPLSP LF LAE+  S+ L  L++ GK+++   +RN  +PSH+L+
Sbjct: 311 GYFSCSRGVRQGDPLSPLLFCLAEDVLSRSLTKLVEQGKLKQMRGTRNCLVPSHILY 367


>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 872

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 27/58 (46%), Positives = 42/58 (72%)
 Frame = +2

Query: 11  FGFFKGSRGLR*GDPLSPSLFILAEEAFSKGLNSLLQNGKIERFASSRNSFIPSHLLF 184
           +G+F   +G+R GDPLSP LF LAEE  S+G++ L+ +G+++R  S R +  PS++LF
Sbjct: 131 YGYFSCGQGVRQGDPLSPLLFCLAEEVLSRGISMLVSSGQVKRIHSPRGTLSPSYVLF 188


>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
 Frame = +2

Query: 14  GFFKGSRGLR*GDPLSPSLFILAEEAFSKGLNSLLQNGKIERFASSRNSFIPSHLLFRIS 193
           GFF  +RG+R GDPLSP LF + EE  S+ ++ L   G I+  A+SRN+ +P H  F + 
Sbjct: 372 GFFNCNRGVRQGDPLSPLLFCIVEEVLSRSISILADKGLIDLIAASRNNCLPFH-CFYVD 430

Query: 194 NEAAVC--AISSQVLNK*LLDRVAWC 265
           +    C   +SS ++ K L  R A C
Sbjct: 431 DLMVFCKAKMSSLIVLKSLFTRYADC 456


>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
          Length = 1135

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/58 (48%), Positives = 40/58 (68%)
 Frame = +2

Query: 11  FGFFKGSRGLR*GDPLSPSLFILAEEAFSKGLNSLLQNGKIERFASSRNSFIPSHLLF 184
           FGFF+ +RGL+ GDPLSP+LFI+A E  S+GLNSL ++     +   + S + SHL +
Sbjct: 494 FGFFQSTRGLKQGDPLSPTLFIIAAEVLSRGLNSLFEDPDYIGYGMPKWSPVVSHLSY 551


>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
           putative protein [Arabidopsis thaliana]
          Length = 1141

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 31/57 (54%), Positives = 38/57 (66%)
 Frame = +2

Query: 14  GFFKGSRGLR*GDPLSPSLFILAEEAFSKGLNSLLQNGKIERFASSRNSFIPSHLLF 184
           GFFK ++GLR GDPLSP LF+LA E FSK LNS   +G I R+    +    SHL+F
Sbjct: 620 GFFKSAKGLRQGDPLSPYLFVLAMEVFSKLLNSRFDSGYI-RYHPKASDLSISHLMF 675


>ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260201 [Solanum
            lycopersicum]
          Length = 1531

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 28/57 (49%), Positives = 36/57 (63%)
 Frame = +2

Query: 14   GFFKGSRGLR*GDPLSPSLFILAEEAFSKGLNSLLQNGKIERFASSRNSFIPSHLLF 184
            GFF  +RGL+ GDPLSP+LFI+  E FS+ LN L QN     F+  +N    +HL F
Sbjct: 919  GFFHSTRGLKQGDPLSPALFIIGAEVFSRNLNLLYQNQLYRGFSMEKNGPQTNHLSF 975


>emb|CAN66134.1| hypothetical protein VITISV_006848 [Vitis vinifera]
          Length = 626

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 33/60 (55%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
 Frame = +2

Query: 14  GFFKGSRGLR*GDPLSPSLFILAEEAFSKGLNSLLQNGKIERF---ASSRNSFIPSHLLF 184
           GFF+ SRGLR GDPLSP LFI+A EA S  L   LQ G +E F   A      + SHLLF
Sbjct: 322 GFFQRSRGLRQGDPLSPFLFIIAMEALSSILKRALQGGYLEGFMAGARGGEGVVVSHLLF 381


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 31/57 (54%), Positives = 39/57 (68%)
 Frame = +2

Query: 14  GFFKGSRGLR*GDPLSPSLFILAEEAFSKGLNSLLQNGKIERFASSRNSFIPSHLLF 184
           GFFK ++GLR GDPLSP LF+LA EAFS  L+S  ++G I     + N  I SHL+F
Sbjct: 642 GFFKSTKGLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSI-SHLMF 697


>emb|CAN83807.1| hypothetical protein VITISV_026962 [Vitis vinifera]
          Length = 806

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
 Frame = +2

Query: 14  GFFKGSRGLR*GDPLSPSLFILAEEAFSKGLNSLLQNGKIERFASSR---NSFIPSHLLF 184
           GFF+ SRGLR GDPLSP LFI+A E  S  L   LQ G +E F +        + SHLLF
Sbjct: 357 GFFQSSRGLRQGDPLSPFLFIIAMEVLSSILKRALQGGYLEGFMAGERGGEGVVVSHLLF 416

Query: 185 RISNEAAVCAISSQ 226
            + +    C  S +
Sbjct: 417 -VDDTLVFCDASKE 429


Top