BLASTX nr result
ID: Akebia25_contig00047108
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00047108
(337 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 65 1e-12
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 63 8e-12
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 63 8e-12
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 61 8e-12
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 61 8e-12
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 64 8e-12
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 62 1e-11
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 62 1e-11
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 60 2e-11
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 61 2e-11
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 61 2e-11
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 58 1e-10
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 59 1e-10
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 59 1e-10
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-... 59 2e-10
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group] 62 5e-10
emb|CAN66588.1| hypothetical protein VITISV_017097 [Vitis vinifera] 57 2e-09
emb|CAE02229.2| OSJNBb0015C06.7 [Oryza sativa Japonica Group] 56 3e-09
emb|CAN60570.1| hypothetical protein VITISV_000227 [Vitis vinifera] 53 9e-09
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 55 6e-08
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 65.5 bits (158), Expect(2) = 1e-12
Identities = 30/49 (61%), Positives = 38/49 (77%)
Frame = -2
Query: 207 MERSRCMLSNASLEQELWAEAVSMAYYLINRSSSVALENKNPNEVWYGN 61
+ ++RCMLSNASL ++ WAEAVS A YLINRS S A++ K P EVW G+
Sbjct: 513 ISKARCMLSNASLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGS 561
Score = 32.7 bits (73), Expect(2) = 1e-12
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -3
Query: 65 GTPSDYSDLKFFGCDAYA 12
G+P++YSDL+ FGC AYA
Sbjct: 560 GSPANYSDLRVFGCTAYA 577
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 62.8 bits (151), Expect(2) = 8e-12
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = -2
Query: 207 MERSRCMLSNASLEQELWAEAVSMAYYLINRSSSVALENKNPNEVWYGN 61
+ ++RC+LSNA L ++ WAEAVS A YLINRS S A++ K P EVW G+
Sbjct: 811 ISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGS 859
Score = 32.7 bits (73), Expect(2) = 8e-12
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -3
Query: 65 GTPSDYSDLKFFGCDAYA 12
G+P++YSDL+ FGC AYA
Sbjct: 858 GSPANYSDLRVFGCTAYA 875
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 62.8 bits (151), Expect(2) = 8e-12
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = -2
Query: 207 MERSRCMLSNASLEQELWAEAVSMAYYLINRSSSVALENKNPNEVWYGN 61
+ ++RC+LSNA L ++ WAEAVS A YLINRS S A++ K P EVW G+
Sbjct: 604 ISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGS 652
Score = 32.7 bits (73), Expect(2) = 8e-12
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -3
Query: 65 GTPSDYSDLKFFGCDAYA 12
G+P++YSDL+ FGC AYA
Sbjct: 651 GSPANYSDLRVFGCTAYA 668
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 60.8 bits (146), Expect(2) = 8e-12
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = -2
Query: 207 MERSRCMLSNASLEQELWAEAVSMAYYLINRSSSVALENKNPNEVWYGN 61
+ ++RCMLSNA L ++ WAEAVS A YLINRS A++ K P +VW G+
Sbjct: 589 ISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSGS 637
Score = 34.7 bits (78), Expect(2) = 8e-12
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -3
Query: 80 MKCGMGTPSDYSDLKFFGCDAYA 12
+K G+P++YSDLK FGC AYA
Sbjct: 631 IKVWSGSPANYSDLKVFGCTAYA 653
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 60.8 bits (146), Expect(2) = 8e-12
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = -2
Query: 207 MERSRCMLSNASLEQELWAEAVSMAYYLINRSSSVALENKNPNEVWYGN 61
+ ++RCMLSNA L ++ WAEAVS A YLINRS A++ K P +VW G+
Sbjct: 421 ISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSGS 469
Score = 34.7 bits (78), Expect(2) = 8e-12
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -3
Query: 80 MKCGMGTPSDYSDLKFFGCDAYA 12
+K G+P++YSDLK FGC AYA
Sbjct: 463 IKVWSGSPANYSDLKVFGCTAYA 485
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 63.9 bits (154), Expect(2) = 8e-12
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = -2
Query: 207 MERSRCMLSNASLEQELWAEAVSMAYYLINRSSSVALENKNPNEVWYGN 61
+ ++RCMLSNA L ++ WAEAVS A YLINRS S A++ K P EVW G+
Sbjct: 570 ISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGS 618
Score = 31.6 bits (70), Expect(2) = 8e-12
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -3
Query: 65 GTPSDYSDLKFFGCDAYA 12
G+P +YSDL+ FGC AYA
Sbjct: 617 GSPVNYSDLRVFGCTAYA 634
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 62.4 bits (150), Expect(2) = 1e-11
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = -2
Query: 207 MERSRCMLSNASLEQELWAEAVSMAYYLINRSSSVALENKNPNEVWYGN 61
+ ++RCMLSNA L ++ WAEAVS A YLINRS A++ K P EVW G+
Sbjct: 576 ISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIEVWSGS 624
Score = 32.7 bits (73), Expect(2) = 1e-11
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -3
Query: 65 GTPSDYSDLKFFGCDAYA 12
G+P++YSDL+ FGC AYA
Sbjct: 623 GSPTNYSDLRVFGCTAYA 640
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gi|20087076|gb|AAM10749.1|AC112514_2 Putative
retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 62.4 bits (150), Expect(2) = 1e-11
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = -2
Query: 207 MERSRCMLSNASLEQELWAEAVSMAYYLINRSSSVALENKNPNEVWYGN 61
+ ++RCMLSNA L ++ WAEAVS A YLINRS S A++ K P +VW G+
Sbjct: 565 ISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIKVWSGS 613
Score = 32.7 bits (73), Expect(2) = 1e-11
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -3
Query: 80 MKCGMGTPSDYSDLKFFGCDAYA 12
+K G+P++YSDL+ FGC AYA
Sbjct: 607 IKVWSGSPANYSDLRVFGCIAYA 629
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 60.5 bits (145), Expect(2) = 2e-11
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = -2
Query: 207 MERSRCMLSNASLEQELWAEAVSMAYYLINRSSSVALENKNPNEVWYGN 61
+ ++RCMLSNA L + WAEA S A YLINRS S A++ K P E+W G+
Sbjct: 543 ISKARCMLSNAGLPRRFWAEAASTACYLINRSPSYAIDKKTPIEMWSGS 591
Score = 33.9 bits (76), Expect(2) = 2e-11
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -3
Query: 65 GTPSDYSDLKFFGCDAYA 12
G+P++YSDLK FGC AYA
Sbjct: 590 GSPANYSDLKVFGCTAYA 607
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 61.2 bits (147), Expect(2) = 2e-11
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = -2
Query: 207 MERSRCMLSNASLEQELWAEAVSMAYYLINRSSSVALENKNPNEVWYGN 61
+ ++RCMLSNA L ++ WAEAVS YLINRS S A + K P EVW G+
Sbjct: 639 ISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGS 687
Score = 32.7 bits (73), Expect(2) = 2e-11
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -3
Query: 65 GTPSDYSDLKFFGCDAYA 12
G+P++YSDL+ FGC AYA
Sbjct: 686 GSPANYSDLRVFGCTAYA 703
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 61.2 bits (147), Expect(2) = 2e-11
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = -2
Query: 207 MERSRCMLSNASLEQELWAEAVSMAYYLINRSSSVALENKNPNEVWYGN 61
+ ++RCMLSNA L ++ WAEAVS YLINRS S A + K P EVW G+
Sbjct: 639 ISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGS 687
Score = 32.7 bits (73), Expect(2) = 2e-11
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -3
Query: 65 GTPSDYSDLKFFGCDAYA 12
G+P++YSDL+ FGC AYA
Sbjct: 686 GSPANYSDLRVFGCTAYA 703
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 57.8 bits (138), Expect(2) = 1e-10
Identities = 29/49 (59%), Positives = 35/49 (71%)
Frame = -2
Query: 207 MERSRCMLSNASLEQELWAEAVSMAYYLINRSSSVALENKNPNEVWYGN 61
+ ++RCMLSNA L ++ WAEAVS A YLINRS S A K P EVW G+
Sbjct: 604 ISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYA-NKKTPIEVWSGS 651
Score = 33.9 bits (76), Expect(2) = 1e-10
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -3
Query: 65 GTPSDYSDLKFFGCDAYA 12
G+P++YSDLK FGC AYA
Sbjct: 650 GSPANYSDLKVFGCTAYA 667
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 58.9 bits (141), Expect(2) = 1e-10
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Frame = -2
Query: 285 F*SQIRKVYGTSHQVFKRIMGESSHSMER--------SRCMLSNASLEQELWAEAVSMAY 130
F S+I K Y S + + + + ER +RCMLSNA L ++ WA AVS
Sbjct: 398 FCSKIFKSYCKSEGIVRHYTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAAAVSTTC 457
Query: 129 YLINRSSSVALENKNPNEVWYG 64
YLINRS S A++ K P +VW G
Sbjct: 458 YLINRSPSYAIDKKTPIKVWSG 479
Score = 32.3 bits (72), Expect(2) = 1e-10
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3
Query: 80 MKCGMGTPSDYSDLKFFGCDAYA 12
+K G P++YSDL+ FGC AYA
Sbjct: 474 IKVWSGFPANYSDLRVFGCTAYA 496
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 58.9 bits (141), Expect(2) = 1e-10
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Frame = -2
Query: 285 F*SQIRKVYGTSHQVFKRIMGESSHSMER--------SRCMLSNASLEQELWAEAVSMAY 130
F S+I K Y S + + + + ER +RCMLSNA L ++ WA AVS
Sbjct: 398 FCSKIFKSYCKSEGIVRHYTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAAAVSTTC 457
Query: 129 YLINRSSSVALENKNPNEVWYG 64
YLINRS S A++ K P +VW G
Sbjct: 458 YLINRSPSYAIDKKTPIKVWSG 479
Score = 32.3 bits (72), Expect(2) = 1e-10
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3
Query: 80 MKCGMGTPSDYSDLKFFGCDAYA 12
+K G P++YSDL+ FGC AYA
Sbjct: 474 IKVWSGFPANYSDLRVFGCTAYA 496
>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549746|gb|ABA92543.1|
retrotransposon protein, putative, Ty1-copia subclass,
expressed [Oryza sativa Japonica Group]
Length = 1170
Score = 58.5 bits (140), Expect(2) = 2e-10
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = -2
Query: 207 MERSRCMLSNASLEQELWAEAVSMAYYLINRSSSVALENKNPNEVWYGN 61
+ +SRCML L ++ WAEAVS A YLINRS S A++ K P EVW G+
Sbjct: 639 ISKSRCMLPYVGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGS 687
Score = 32.0 bits (71), Expect(2) = 2e-10
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -3
Query: 65 GTPSDYSDLKFFGCDAYA 12
G+P++YSDL+ FGC AYA
Sbjct: 686 GSPANYSDLRVFGCIAYA 703
>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
Length = 1009
Score = 62.0 bits (149), Expect(2) = 5e-10
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = -2
Query: 207 MERSRCMLSNASLEQELWAEAVSMAYYLINRSSSVALENKNPNEVW 70
+ ++RCMLSNA L ++ WAEAVS A YLINRS S A++ K P EVW
Sbjct: 425 ISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVW 470
Score = 27.3 bits (59), Expect(2) = 5e-10
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 62 TPSDYSDLKFFGCDAYA 12
+P+ YSDL+ F C AYA
Sbjct: 473 SPAKYSDLRVFSCTAYA 489
>emb|CAN66588.1| hypothetical protein VITISV_017097 [Vitis vinifera]
Length = 815
Score = 56.6 bits (135), Expect(2) = 2e-09
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = -2
Query: 207 MERSRCMLSNASLEQELWAEAVSMAYYLINRSSSVALENKNPNEVWYGN 61
+ER+RC+ NA LE++ WAE V+M YLINRS AL+ K EVW G+
Sbjct: 248 IERARCLRLNAGLEKKFWAEVVNMVCYLINRSPIAALDGKVVKEVWTGS 296
Score = 30.8 bits (68), Expect(2) = 2e-09
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 65 GTPSDYSDLKFFGCDAYALIP 3
G+P DYS L+ FGC Y IP
Sbjct: 295 GSPVDYSGLRVFGCPVYVHIP 315
>emb|CAE02229.2| OSJNBb0015C06.7 [Oryza sativa Japonica Group]
Length = 977
Score = 55.8 bits (133), Expect(2) = 3e-09
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = -2
Query: 207 MERSRCMLSNASLEQELWAEAVSMAYYLINRSSSVALENKNPNEVWYG 64
+ ++RCMLSNA + + WAEA + YLINRS ++ + K P +VW+G
Sbjct: 418 ISKARCMLSNAHMNKRFWAEAANTICYLINRSPTIPISKKTPIDVWFG 465
Score = 30.8 bits (68), Expect(2) = 3e-09
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 65 GTPSDYSDLKFFGCDAYA 12
G P+DYS ++ FGC AYA
Sbjct: 465 GMPADYSQMRVFGCTAYA 482
>emb|CAN60570.1| hypothetical protein VITISV_000227 [Vitis vinifera]
Length = 605
Score = 53.1 bits (126), Expect(2) = 9e-09
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = -2
Query: 204 ERSRCMLSNASLEQELWAEAVSMAYYLINRSSSVALENKNPNEVWYGN 61
ER++C+ N LE + W EAV+MA YLINRS L K +EVW G+
Sbjct: 103 ERTQCLKLNVGLENKFWVEAVNMACYLINRSPRATLHGKVVDEVWIGS 150
Score = 32.0 bits (71), Expect(2) = 9e-09
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 68 MGTPSDYSDLKFFGCDAYALIP 3
+G+P DYS L+ FGC Y IP
Sbjct: 148 IGSPVDYSSLRLFGCPTYVHIP 169
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 55.5 bits (132), Expect(2) = 6e-08
Identities = 24/48 (50%), Positives = 34/48 (70%)
Frame = -2
Query: 207 MERSRCMLSNASLEQELWAEAVSMAYYLINRSSSVALENKNPNEVWYG 64
++++RCML N+ L + WAEAV+ A YL+NRS S A+ K P E+W G
Sbjct: 594 VDKTRCMLINSKLPRSFWAEAVNTASYLVNRSPSSAIGFKTPEELWNG 641
Score = 26.9 bits (58), Expect(2) = 6e-08
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 65 GTPSDYSDLKFFGCDAY 15
G P++Y +L+ FGC AY
Sbjct: 641 GKPANYQNLRVFGCPAY 657