BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00046315
         (372 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30094.3| unnamed protein product [Vitis vinifera]              181   9e-44
ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containi...   181   9e-44
ref|XP_007204422.1| hypothetical protein PRUPE_ppb002215mg [Prun...   171   7e-41
ref|XP_004308620.1| PREDICTED: pentatricopeptide repeat-containi...   168   6e-40
gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis]     167   1e-39
ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   163   3e-38
ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containi...   163   3e-38
ref|XP_007028547.1| Pentatricopeptide repeat (PPR) superfamily p...   159   3e-37
ref|XP_006296159.1| hypothetical protein CARUB_v10025312mg [Caps...   149   4e-34
ref|XP_006340092.1| PREDICTED: pentatricopeptide repeat-containi...   149   5e-34
ref|XP_004237347.1| PREDICTED: pentatricopeptide repeat-containi...   148   7e-34
ref|XP_002529164.1| pentatricopeptide repeat-containing protein,...   148   7e-34
ref|XP_002881370.1| pentatricopeptide repeat-containing protein ...   147   2e-33
ref|XP_004498123.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   145   4e-33
ref|XP_003589755.1| Pentatricopeptide repeat-containing protein ...   145   7e-33
ref|XP_006587960.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
ref|NP_181048.1| pentatricopeptide repeat-containing protein [Ar...   144   2e-32
ref|XP_007161435.1| hypothetical protein PHAVU_001G068400g [Phas...   142   6e-32
ref|XP_006410659.1| hypothetical protein EUTSA_v10016379mg [Eutr...   140   1e-31
gb|EYU18647.1| hypothetical protein MIMGU_mgv1a022303mg, partial...   129   5e-28

>emb|CBI30094.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  181 bits (459), Expect = 9e-44
 Identities = 82/119 (68%), Positives = 104/119 (87%)
 Frame = +3

Query: 15  KIFTTDRDHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCG 194
           KI    +D T+D N++R NW IT LS++G+I+EAR+LFD+M E DV+TWTTVISGYIKCG
Sbjct: 53  KISIPRKDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCG 112

Query: 195 LVKEARFLFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +++EAR LFD+V+AKKNVVTWTA++ GYIRSN+IS+AEKLF +MP+KNVVSWNTMI GY
Sbjct: 113 MIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGY 171



 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 49/123 (39%), Positives = 82/123 (66%), Gaps = 2/123 (1%)
 Frame = +3

Query: 6   KPNKIFTTDR--DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISG 179
           + NKI   ++  +   ++N+   N  I   ++ G+I  A  LF++MPER+VV+W TV+S 
Sbjct: 142 RSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSM 201

Query: 180 YIKCGLVKEARFLFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTM 359
             +CG ++EAR LFD++  +++V++WTA+IAG      + EA  LF +MP++++ SWNTM
Sbjct: 202 LAQCGRIEEARRLFDRM-PERDVISWTAMIAGL-----LDEALDLFERMPERDLPSWNTM 255

Query: 360 ISG 368
           I+G
Sbjct: 256 ITG 258



 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 45/107 (42%), Positives = 75/107 (70%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++N+   N  ++ L++ G+I EAR+LFD+MPERDV++WT +I+G     L+ EA  LF++
Sbjct: 189 ERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAG-----LLDEALDLFER 243

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISG 368
           +  ++++ +W  +I G I++  +  A KLF +MP KNV+SW TMI+G
Sbjct: 244 M-PERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITG 289


>ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Vitis vinifera]
          Length = 635

 Score =  181 bits (459), Expect = 9e-44
 Identities = 82/119 (68%), Positives = 104/119 (87%)
 Frame = +3

Query: 15  KIFTTDRDHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCG 194
           KI    +D T+D N++R NW IT LS++G+I+EAR+LFD+M E DV+TWTTVISGYIKCG
Sbjct: 38  KISIPRKDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCG 97

Query: 195 LVKEARFLFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +++EAR LFD+V+AKKNVVTWTA++ GYIRSN+IS+AEKLF +MP+KNVVSWNTMI GY
Sbjct: 98  MIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGY 156



 Score =  107 bits (266), Expect = 2e-21
 Identities = 50/107 (46%), Positives = 81/107 (75%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++N+   N  ++ L++ G+I EAR+LFD+MPERDV++WT +I+G  K G + EAR LFD+
Sbjct: 174 ERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDR 233

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISG 368
           +  ++NVV+W A+I GY ++ ++ EA  LF +MP++++ SWNTMI+G
Sbjct: 234 M-PERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITG 279



 Score =  106 bits (264), Expect = 4e-21
 Identities = 53/124 (42%), Positives = 86/124 (69%), Gaps = 2/124 (1%)
 Frame = +3

Query: 6   KPNKIFTTDR--DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISG 179
           + NKI   ++  +   ++N+   N  I   ++ G+I  A  LF++MPER+VV+W TV+S 
Sbjct: 127 RSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSM 186

Query: 180 YIKCGLVKEARFLFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTM 359
             +CG ++EAR LFD++  +++V++WTA+IAG  ++ +I EA  LF +MP++NVVSWN M
Sbjct: 187 LAQCGRIEEARRLFDRM-PERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAM 245

Query: 360 ISGY 371
           I+GY
Sbjct: 246 ITGY 249



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 38/101 (37%), Positives = 65/101 (64%)
 Frame = +3

Query: 36  DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 215
           D   ++N+   N  IT  ++  ++ EA  LF++MPERD+ +W T+I+G I+ G ++ AR 
Sbjct: 232 DRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARK 291

Query: 216 LFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKN 338
           LF+++  KKNV++WT +I G ++  +  EA K+F +M   N
Sbjct: 292 LFNEM-PKKNVISWTTMITGCVQEGESEEALKIFSRMLSTN 331


>ref|XP_007204422.1| hypothetical protein PRUPE_ppb002215mg [Prunus persica]
           gi|462399953|gb|EMJ05621.1| hypothetical protein
           PRUPE_ppb002215mg [Prunus persica]
          Length = 634

 Score =  171 bits (434), Expect = 7e-41
 Identities = 77/119 (64%), Positives = 102/119 (85%)
 Frame = +3

Query: 15  KIFTTDRDHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCG 194
           +I + DRD +   N+++SNW IT+LS++GK  EARQ+FD MP++DVVTWTTVI+GYI+CG
Sbjct: 39  RITSPDRDFSASFNVAQSNWLITRLSKDGKFREARQVFDGMPDKDVVTWTTVITGYIRCG 98

Query: 195 LVKEARFLFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +++EAR LFD+V+AKK+V+TWTAL++GYIR  Q+ EAE+LF QMP KNVVSWNTMI GY
Sbjct: 99  MMEEARSLFDRVDAKKDVITWTALVSGYIRLKQMKEAERLFYQMPVKNVVSWNTMIDGY 157



 Score =  105 bits (262), Expect = 6e-21
 Identities = 47/108 (43%), Positives = 79/108 (73%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++N+   N  +T L+  G+I EAR  F+ MPERDV++WT +++G+ + G++ EAR  FD+
Sbjct: 175 EKNVVSWNTVLTALAHSGRIEEARTRFNLMPERDVISWTAMVAGFSRNGMIDEAREFFDR 234

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +  K+NVV+W A+I GY ++ ++ EA +LF +MP +++ SWNTMI+G+
Sbjct: 235 M-PKRNVVSWNAMITGYTQNMRLDEALELFERMPGRDMPSWNTMITGF 281



 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 43/107 (40%), Positives = 73/107 (68%)
 Frame = +3

Query: 51  QNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKV 230
           +N+   N  I   +R  ++  A +LF++MPE++VV+W TV++     G ++EAR  F+ +
Sbjct: 145 KNVVSWNTMIDGYARNCQVDMALELFERMPEKNVVSWNTVLTALAHSGRIEEARTRFN-L 203

Query: 231 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
             +++V++WTA++AG+ R+  I EA + F +MP +NVVSWN MI+GY
Sbjct: 204 MPERDVISWTAMVAGFSRNGMIDEAREFFDRMPKRNVVSWNAMITGY 250



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 38/106 (35%), Positives = 65/106 (61%)
 Frame = +3

Query: 36  DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 215
           D    +N+   N  IT  ++  ++ EA +LF++MP RD+ +W T+I+G+I+ G +K A+ 
Sbjct: 233 DRMPKRNVVSWNAMITGYTQNMRLDEALELFERMPGRDMPSWNTMITGFIQNGDLKRAQE 292

Query: 216 LFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWN 353
           LF ++  +KNV++WT +I GY++  Q  +A   F +M   N V  N
Sbjct: 293 LFIRM-PQKNVISWTTMITGYVQDGQNEKALMFFSKMLVDNGVKPN 337


>ref|XP_004308620.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 714

 Score =  168 bits (426), Expect = 6e-40
 Identities = 76/119 (63%), Positives = 98/119 (82%)
 Frame = +3

Query: 15  KIFTTDRDHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCG 194
           +I T  RDH+   ++++SNW ITKLSR+G+I EARQ+FD+MPERDVVTWTTVI+ Y+K G
Sbjct: 36  RITTPHRDHSASSDVAKSNWLITKLSRDGRIREARQVFDEMPERDVVTWTTVITAYVKSG 95

Query: 195 LVKEARFLFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +++EAR LFD+ +A KNV+TWTAL+ GYIR  ++ EAE LF QMP +NVVSWNTMI GY
Sbjct: 96  MLEEARSLFDRADAVKNVITWTALVGGYIRLRRLEEAEMLFYQMPVRNVVSWNTMIDGY 154



 Score =  104 bits (259), Expect = 1e-20
 Identities = 46/108 (42%), Positives = 81/108 (75%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++N+   N  +T L++ G+I EAR+LF  MPERDV++WT +++G  + G V EAR +FD+
Sbjct: 172 ERNVVSWNTVLTALAQCGRIEEARRLFGLMPERDVISWTAMVAGLSRNGRVDEAREVFDR 231

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +  ++NVV+W A++ GY ++ ++ EA +LF +MP++++ SWNTM++G+
Sbjct: 232 M-PRRNVVSWNAMVTGYAQNGRLEEALELFERMPERDMPSWNTMVTGF 278



 Score =  100 bits (250), Expect = 2e-19
 Identities = 45/107 (42%), Positives = 77/107 (71%)
 Frame = +3

Query: 51  QNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKV 230
           +N+   N  I   +R  ++ EA +LF++MPER+VV+W TV++   +CG ++EAR LF  +
Sbjct: 142 RNVVSWNTMIDGYARSRRVDEALELFERMPERNVVSWNTVLTALAQCGRIEEARRLFG-L 200

Query: 231 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
             +++V++WTA++AG  R+ ++ EA ++F +MP +NVVSWN M++GY
Sbjct: 201 MPERDVISWTAMVAGLSRNGRVDEAREVFDRMPRRNVVSWNAMVTGY 247



 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 42/98 (42%), Positives = 73/98 (74%)
 Frame = +3

Query: 78  ITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNAKKNVVTW 257
           +  LSR G++ EAR++FD+MP R+VV+W  +++GY + G ++EA  LF+++  ++++ +W
Sbjct: 213 VAGLSRNGRVDEAREVFDRMPRRNVVSWNAMVTGYAQNGRLEEALELFERM-PERDMPSW 271

Query: 258 TALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
             ++ G+I++  +  A +LFVQMP KNV+SW TMI+GY
Sbjct: 272 NTMVTGFIQNGDLERAWELFVQMPQKNVISWTTMITGY 309



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 33/92 (35%), Positives = 63/92 (68%)
 Frame = +3

Query: 51  QNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKV 230
           +N+   N  +T  ++ G++ EA +LF++MPERD+ +W T+++G+I+ G ++ A  LF ++
Sbjct: 235 RNVVSWNAMVTGYAQNGRLEEALELFERMPERDMPSWNTMVTGFIQNGDLERAWELFVQM 294

Query: 231 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQM 326
             +KNV++WT +I GY++  +  EA  +F +M
Sbjct: 295 -PQKNVISWTTMITGYVQDGRNEEALMIFSKM 325


>gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis]
          Length = 622

 Score =  167 bits (423), Expect = 1e-39
 Identities = 71/123 (57%), Positives = 101/123 (82%)
 Frame = +3

Query: 3   NKPNKIFTTDRDHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGY 182
           N   KI   +RD++++  ++RSNW +TKLS+ G+I +ARQ+FD+MP+RDV+TWTTVI+GY
Sbjct: 25  NNAPKILLLERDYSVNSGVARSNWWLTKLSKSGRIGDARQVFDEMPDRDVITWTTVITGY 84

Query: 183 IKCGLVKEARFLFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMI 362
            +CG+++EAR LFD+ +AKK+V+TWT ++ GY+R  +I EAE+LF +MP KNVVSWNTMI
Sbjct: 85  ARCGMIEEARKLFDRADAKKDVITWTVMVNGYLRLRRIKEAERLFFEMPVKNVVSWNTMI 144

Query: 363 SGY 371
            GY
Sbjct: 145 EGY 147



 Score =  114 bits (284), Expect = 2e-23
 Identities = 51/112 (45%), Positives = 85/112 (75%)
 Frame = +3

Query: 36  DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 215
           D   ++N+   N  IT L++ G++ EAR+LFD MPERDV++WTT+++G+ + G + EAR 
Sbjct: 161 DRMPERNVVSWNTIITALAQSGRMEEARRLFDMMPERDVISWTTMVAGFSRNGRIDEARV 220

Query: 216 LFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +FD++   +NVV+W A+I GY ++ +++EA +LF +MP++N+ SWNTMI+G+
Sbjct: 221 VFDRMPV-QNVVSWNAMITGYAQNMRLNEAFELFERMPERNLSSWNTMITGF 271



 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 46/107 (42%), Positives = 74/107 (69%)
 Frame = +3

Query: 51  QNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKV 230
           +N+   N  I    + G++  A  LFD+MPER+VV+W T+I+   + G ++EAR LFD +
Sbjct: 135 KNVVSWNTMIEGYFQNGRVNSALGLFDRMPERNVVSWNTIITALAQSGRMEEARRLFDMM 194

Query: 231 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
             +++V++WT ++AG+ R+ +I EA  +F +MP +NVVSWN MI+GY
Sbjct: 195 -PERDVISWTTMVAGFSRNGRIDEARVVFDRMPVQNVVSWNAMITGY 240



 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 38/90 (42%), Positives = 63/90 (70%)
 Frame = +3

Query: 102 KILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNAKKNVVTWTALIAGYI 281
           +I EA +LF +MP ++VV+W T+I GY + G V  A  LFD++  ++NVV+W  +I    
Sbjct: 121 RIKEAERLFFEMPVKNVVSWNTMIEGYFQNGRVNSALGLFDRM-PERNVVSWNTIITALA 179

Query: 282 RSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +S ++ EA +LF  MP+++V+SW TM++G+
Sbjct: 180 QSGRMEEARRLFDMMPERDVISWTTMVAGF 209



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 38/92 (41%), Positives = 64/92 (69%)
 Frame = +3

Query: 51  QNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKV 230
           QN+   N  IT  ++  ++ EA +LF++MPER++ +W T+I+G+I+ G +K A  LF+K+
Sbjct: 228 QNVVSWNAMITGYAQNMRLNEAFELFERMPERNLSSWNTMITGFIQNGELKRASNLFNKM 287

Query: 231 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQM 326
             +KN ++WT +I+GYI+  Q  EA K+F +M
Sbjct: 288 -PEKNSISWTTMISGYIQDGQNEEALKMFTKM 318



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 40/148 (27%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++N+S  N  IT   + G++  A  LF++MPE++ ++WTT+ISGYI+ G  +EA  +F K
Sbjct: 258 ERNLSSWNTMITGFIQNGELKRASNLFNKMPEKNSISWTTMISGYIQDGQNEEALKMFTK 317

Query: 228 V---NAKKNVVTW-----------------------------------TALIAGYIRSNQ 293
           +     + N  T+                                   +ALI  Y +  +
Sbjct: 318 MVVDGIRPNEATFASVLSACSNLAGLGEGQQIHQMISKTVFQGSEILVSALINMYSKCGE 377

Query: 294 ISEAEKLF--VQMPDKNVVSWNTMISGY 371
           +S A K+F       +++VSWN MI+ Y
Sbjct: 378 LSTARKMFDDGSKSQRDLVSWNGMIAAY 405


>ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g35030, mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  163 bits (412), Expect = 3e-38
 Identities = 74/119 (62%), Positives = 99/119 (83%)
 Frame = +3

Query: 15  KIFTTDRDHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCG 194
           KI +  RD + + N++RSNW IT+L +EGKI EARQ+F++MP+RDVV+WT VI+GYIKCG
Sbjct: 52  KISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCG 111

Query: 195 LVKEARFLFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +++EA+ LFD+ +A KNVVTWTAL++GY+R N+I EA +LF  MP KNV+SWNTMI GY
Sbjct: 112 MIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGY 170



 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/108 (44%), Positives = 78/108 (72%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++N+   N  IT   +  ++ EA++LF++MPERDV++WTT+++G  K G + +AR LFDK
Sbjct: 188 ERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDK 247

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +   +NVV+W  +I GY ++ ++ EA KLF QMP++ + SWNTMI+G+
Sbjct: 248 MPV-RNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGF 294



 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 46/107 (42%), Positives = 75/107 (70%)
 Frame = +3

Query: 51  QNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKV 230
           +N+   N  I   +R+G I +A  LF+ MPER+VV+W TVI+ +++   V EA+ LF+++
Sbjct: 158 KNVISWNTMIEGYARKGWIDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRM 217

Query: 231 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
             +++V++WT ++AG  ++ +I +A  LF +MP +NVVSWNTMI GY
Sbjct: 218 -PERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGY 263



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/101 (38%), Positives = 66/101 (65%)
 Frame = +3

Query: 51  QNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKV 230
           +N+   N  I   ++  ++ EA +LF+QMPER++ +W T+I+G+I+ G ++ A   F K+
Sbjct: 251 RNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKM 310

Query: 231 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWN 353
            + KNVVTWTA+I+G+++  +  EA K+F +M   N V  N
Sbjct: 311 -SNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPN 350


>ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  163 bits (412), Expect = 3e-38
 Identities = 74/119 (62%), Positives = 99/119 (83%)
 Frame = +3

Query: 15  KIFTTDRDHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCG 194
           KI +  RD + + N++RSNW IT+L +EGKI EARQ+F++MP+RDVV+WT VI+GYIKCG
Sbjct: 52  KISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCG 111

Query: 195 LVKEARFLFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +++EA+ LFD+ +A KNVVTWTAL++GY+R N+I EA +LF  MP KNV+SWNTMI GY
Sbjct: 112 MIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGY 170



 Score =  105 bits (263), Expect = 5e-21
 Identities = 48/108 (44%), Positives = 78/108 (72%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++N+   N  IT   +  ++ EA++LF++MPERDV++WTT+++G  K G + +AR LFDK
Sbjct: 188 ERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDK 247

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +   +NVV+W  +I GY ++ ++ EA KLF QMP++ + SWNTMI+G+
Sbjct: 248 MPV-RNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGF 294



 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 46/107 (42%), Positives = 76/107 (71%)
 Frame = +3

Query: 51  QNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKV 230
           +N+   N  I   +R+G I +A  LF++MPER+VV+W TVI+ +++   V EA+ LF+++
Sbjct: 158 KNVISWNTMIEGYARKGWIDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRM 217

Query: 231 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
             +++V++WT ++AG  ++ +I +A  LF +MP +NVVSWNTMI GY
Sbjct: 218 -PERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGY 263



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/101 (38%), Positives = 66/101 (65%)
 Frame = +3

Query: 51  QNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKV 230
           +N+   N  I   ++  ++ EA +LF+QMPER++ +W T+I+G+I+ G ++ A   F K+
Sbjct: 251 RNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKM 310

Query: 231 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWN 353
            + KNVVTWTA+I+G+++  +  EA K+F +M   N V  N
Sbjct: 311 -SNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPN 350


>ref|XP_007028547.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           isoform 1 [Theobroma cacao]
           gi|590635100|ref|XP_007028548.1| Pentatricopeptide
           repeat (PPR) superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508717152|gb|EOY09049.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative isoform 1 [Theobroma cacao]
           gi|508717153|gb|EOY09050.1| Pentatricopeptide repeat
           (PPR) superfamily protein, putative isoform 1 [Theobroma
           cacao]
          Length = 631

 Score =  159 bits (403), Expect = 3e-37
 Identities = 73/114 (64%), Positives = 99/114 (86%), Gaps = 2/114 (1%)
 Frame = +3

Query: 36  DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERD--VVTWTTVISGYIKCGLVKEA 209
           D++ + ++++SNW ITKLS EGKI + R+LFDQMP+RD  V+TWT +ISGYIK GL++EA
Sbjct: 39  DYSANSSVAQSNWLITKLSTEGKISQVRKLFDQMPDRDKDVITWTALISGYIKLGLIEEA 98

Query: 210 RFLFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           R LFD+V++KKNVVTWTA+++GY+RSN+I EA++LF +MP KNVVSWNTM+ GY
Sbjct: 99  RRLFDRVDSKKNVVTWTAMLSGYMRSNRILEAKRLFDEMPVKNVVSWNTMVDGY 152



 Score =  103 bits (258), Expect = 2e-20
 Identities = 49/124 (39%), Positives = 84/124 (67%), Gaps = 2/124 (1%)
 Frame = +3

Query: 6   KPNKIFTTDR--DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISG 179
           + N+I    R  D    +N+   N  +    + G + +A +LF +MPER+VV+W T+++ 
Sbjct: 123 RSNRILEAKRLFDEMPVKNVVSWNTMVDGYVQNGMVGKAFELFQEMPERNVVSWNTMLTA 182

Query: 180 YIKCGLVKEARFLFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTM 359
             +CG V++AR LFD++  K++V++WTA++AG  ++ +I EA ++F +MP++NVVSWN M
Sbjct: 183 LAQCGRVEDARGLFDRM-PKRDVISWTAMVAGLAKNGKIDEARRVFDRMPERNVVSWNAM 241

Query: 360 ISGY 371
           I+GY
Sbjct: 242 ITGY 245



 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 46/98 (46%), Positives = 74/98 (75%)
 Frame = +3

Query: 78  ITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNAKKNVVTW 257
           +  L++ GKI EAR++FD+MPER+VV+W  +I+GY +   + EA  LF+++  ++N+ +W
Sbjct: 211 VAGLAKNGKIDEARRVFDRMPERNVVSWNAMITGYSQNMKLDEAFELFERM-PERNLSSW 269

Query: 258 TALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
            A+I G+I++ ++  AEKLF ++P KNVVSW TMI+GY
Sbjct: 270 NAMITGFIQNGELKRAEKLFDKVPRKNVVSWTTMITGY 307



 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 44/106 (41%), Positives = 69/106 (65%)
 Frame = +3

Query: 36  DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 215
           D   ++N+   N  IT  S+  K+ EA +LF++MPER++ +W  +I+G+I+ G +K A  
Sbjct: 228 DRMPERNVVSWNAMITGYSQNMKLDEAFELFERMPERNLSSWNAMITGFIQNGELKRAEK 287

Query: 216 LFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWN 353
           LFDKV  +KNVV+WT +I GY++  Q  EA K+F +M  ++ V  N
Sbjct: 288 LFDKV-PRKNVVSWTTMITGYVQDEQSEEALKIFSKMMAEDGVKPN 332


>ref|XP_006296159.1| hypothetical protein CARUB_v10025312mg [Capsella rubella]
           gi|482564867|gb|EOA29057.1| hypothetical protein
           CARUB_v10025312mg [Capsella rubella]
          Length = 636

 Score =  149 bits (376), Expect = 4e-34
 Identities = 66/111 (59%), Positives = 91/111 (81%)
 Frame = +3

Query: 39  HTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFL 218
           ++ +  + R  W I +L REG+I+EAR+LFD +PERDVVTWT VI+GYIK G ++EAR L
Sbjct: 49  YSSNSRVPRPEWLIGELCREGRIVEARKLFDGLPERDVVTWTDVITGYIKLGNMREAREL 108

Query: 219 FDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           FD+V+++KNVVTWTA+++GY+RS Q+S AE LF  MP++N+VSWNTM+ GY
Sbjct: 109 FDRVDSRKNVVTWTAMVSGYLRSKQLSVAEMLFQDMPERNIVSWNTMVDGY 159



 Score =  103 bits (258), Expect = 2e-20
 Identities = 48/112 (42%), Positives = 75/112 (66%)
 Frame = +3

Query: 36  DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 215
           D   ++NI   N  +  L + G+I EA  LF +MP RDV++WT ++ G  K G V +AR 
Sbjct: 173 DEMPEKNIVSWNTMMKALVQRGRIDEAMNLFQRMPRRDVISWTAMVDGLAKNGKVDDARQ 232

Query: 216 LFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           LFD +  ++N+++W A+I GY  +N+I EA++LF  MP+++  SWNTMI+G+
Sbjct: 233 LFDSM-PERNIISWNAMITGYAHNNRIDEADQLFQVMPERDFASWNTMITGF 283



 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 43/95 (45%), Positives = 67/95 (70%)
 Frame = +3

Query: 87  LSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNAKKNVVTWTAL 266
           L++ GK+ +ARQLFD MPER++++W  +I+GY     + EA  LF +V  +++  +W  +
Sbjct: 221 LAKNGKVDDARQLFDSMPERNIISWNAMITGYAHNNRIDEADQLF-QVMPERDFASWNTM 279

Query: 267 IAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           I G+IR+  I+ A  LF +MP+KNV+SW TMI+GY
Sbjct: 280 ITGFIRNKNINRASVLFDRMPEKNVISWTTMITGY 314



 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 38/108 (35%), Positives = 76/108 (70%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++NI   N  +   ++ G+I +A +LFD+MPE+++V+W T++   ++ G + EA  LF +
Sbjct: 146 ERNIVSWNTMVDGYAQSGRIDKALELFDEMPEKNIVSWNTMMKALVQRGRIDEAMNLFQR 205

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +  +++V++WTA++ G  ++ ++ +A +LF  MP++N++SWN MI+GY
Sbjct: 206 M-PRRDVISWTAMVDGLAKNGKVDDARQLFDSMPERNIISWNAMITGY 252



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 38/97 (39%), Positives = 59/97 (60%)
 Frame = +3

Query: 36  DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 215
           D   ++NI   N  IT  +   +I EA QLF  MPERD  +W T+I+G+I+   +  A  
Sbjct: 235 DSMPERNIISWNAMITGYAHNNRIDEADQLFQVMPERDFASWNTMITGFIRNKNINRASV 294

Query: 216 LFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQM 326
           LFD++  +KNV++WT +I GY+ + +  +A K F +M
Sbjct: 295 LFDRM-PEKNVISWTTMITGYVENKENEDALKFFSKM 330


>ref|XP_006340092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Solanum tuberosum]
          Length = 641

 Score =  149 bits (375), Expect = 5e-34
 Identities = 68/112 (60%), Positives = 95/112 (84%)
 Frame = +3

Query: 36  DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 215
           D+T +Q++SRSN  I+KLS+EG++ EAR+LFD+M E DVV+WT +ISGYI+CG + +AR 
Sbjct: 45  DYTCNQDVSRSNRIISKLSKEGQVDEARKLFDKMSEPDVVSWTAMISGYIRCGKIDKARE 104

Query: 216 LFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           LFD+ +AK++VVTWTA++A Y R+N+I EAE LF +MP+KNVVSWN++I GY
Sbjct: 105 LFDRTDAKRDVVTWTAMLAAYARTNRILEAEMLFNEMPEKNVVSWNSLIDGY 156



 Score =  111 bits (278), Expect = 9e-23
 Identities = 55/108 (50%), Positives = 79/108 (73%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++N+   N  I  L+R G+I EAR LFDQMPE++VV+WTT+I+G  + G V EAR LFD+
Sbjct: 174 ERNVVSWNMVIAGLARNGRINEARVLFDQMPEKNVVSWTTMIAGLSRNGRVDEARTLFDR 233

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
              ++NVV+W A+I GY +++++ EA +LF  MP+K V SWNTMI G+
Sbjct: 234 -TPERNVVSWNAMITGYTQNSKLDEAFELFEMMPEKIVSSWNTMIMGF 280



 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 49/108 (45%), Positives = 74/108 (68%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++N+   N  I   +R G+I +  +LF +M ER+VV+W  VI+G  + G + EAR LFD+
Sbjct: 143 EKNVVSWNSLIDGYARNGRIDKGLELFWKMRERNVVSWNMVIAGLARNGRINEARVLFDQ 202

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +  +KNVV+WT +IAG  R+ ++ EA  LF + P++NVVSWN MI+GY
Sbjct: 203 M-PEKNVVSWTTMIAGLSRNGRVDEARTLFDRTPERNVVSWNAMITGY 249



 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 46/93 (49%), Positives = 68/93 (73%)
 Frame = +3

Query: 90  SREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNAKKNVVTWTALI 269
           +R  +ILEA  LF++MPE++VV+W ++I GY + G + +   LF K+  ++NVV+W  +I
Sbjct: 126 ARTNRILEAEMLFNEMPEKNVVSWNSLIDGYARNGRIDKGLELFWKMR-ERNVVSWNMVI 184

Query: 270 AGYIRSNQISEAEKLFVQMPDKNVVSWNTMISG 368
           AG  R+ +I+EA  LF QMP+KNVVSW TMI+G
Sbjct: 185 AGLARNGRINEARVLFDQMPEKNVVSWTTMIAG 217



 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 45/112 (40%), Positives = 72/112 (64%)
 Frame = +3

Query: 36  DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 215
           D   ++N+      I  LSR G++ EAR LFD+ PER+VV+W  +I+GY +   + EA  
Sbjct: 201 DQMPEKNVVSWTTMIAGLSRNGRVDEARTLFDRTPERNVVSWNAMITGYTQNSKLDEAFE 260

Query: 216 LFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           LF+ +  +K V +W  +I G+I++ ++  A  LF +M  ++VVSW+TMI+GY
Sbjct: 261 LFEMM-PEKIVSSWNTMIMGFIQNGELGRARILFDKMRQRDVVSWSTMINGY 311



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 37/97 (38%), Positives = 62/97 (63%)
 Frame = +3

Query: 36  DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 215
           D T ++N+   N  IT  ++  K+ EA +LF+ MPE+ V +W T+I G+I+ G +  AR 
Sbjct: 232 DRTPERNVVSWNAMITGYTQNSKLDEAFELFEMMPEKIVSSWNTMIMGFIQNGELGRARI 291

Query: 216 LFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQM 326
           LFDK+  +++VV+W+ +I GY++  +  EA + F  M
Sbjct: 292 LFDKMR-QRDVVSWSTMINGYMQEGRSEEALRNFCDM 327


>ref|XP_004237347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Solanum lycopersicum]
          Length = 624

 Score =  148 bits (374), Expect = 7e-34
 Identities = 68/112 (60%), Positives = 94/112 (83%)
 Frame = +3

Query: 36  DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 215
           D+T +Q++SRSN  I+KLS+EG++ EAR+LFD+M E DVV+WT +ISGYI+CG + +AR 
Sbjct: 45  DYTCNQDVSRSNRIISKLSKEGQVDEARKLFDKMSEPDVVSWTAMISGYIRCGKIDKARE 104

Query: 216 LFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           LFD+ +AK++VVTWTA++A Y R N+I EAE LF +MP+KNVVSWN++I GY
Sbjct: 105 LFDRTDAKRDVVTWTAMVAAYARMNRILEAEMLFNEMPEKNVVSWNSLIDGY 156



 Score =  109 bits (273), Expect = 3e-22
 Identities = 54/108 (50%), Positives = 80/108 (74%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++N+   N  I  L++ G+I EAR LFDQMPE++VV+WTT+I+G  + G V+EAR LFD+
Sbjct: 174 ERNVVSWNMVIAGLAQNGRINEARVLFDQMPEKNVVSWTTMIAGLSRNGRVEEARTLFDR 233

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
              ++NVV+W A+I GY +++++ EA +LF  MP+K V SWNTMI G+
Sbjct: 234 -TPERNVVSWNAMITGYTQNSRLDEAFELFEIMPEKIVSSWNTMIMGF 280



 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 49/108 (45%), Positives = 74/108 (68%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++N+   N  I   +R G+I +  +LF +M ER+VV+W  VI+G  + G + EAR LFD+
Sbjct: 143 EKNVVSWNSLIDGYARNGRIDKGLELFWKMGERNVVSWNMVIAGLAQNGRINEARVLFDQ 202

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +  +KNVV+WT +IAG  R+ ++ EA  LF + P++NVVSWN MI+GY
Sbjct: 203 M-PEKNVVSWTTMIAGLSRNGRVEEARTLFDRTPERNVVSWNAMITGY 249



 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 45/97 (46%), Positives = 69/97 (71%)
 Frame = +3

Query: 78  ITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNAKKNVVTW 257
           +   +R  +ILEA  LF++MPE++VV+W ++I GY + G + +   LF K+  ++NVV+W
Sbjct: 122 VAAYARMNRILEAEMLFNEMPEKNVVSWNSLIDGYARNGRIDKGLELFWKM-GERNVVSW 180

Query: 258 TALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISG 368
             +IAG  ++ +I+EA  LF QMP+KNVVSW TMI+G
Sbjct: 181 NMVIAGLAQNGRINEARVLFDQMPEKNVVSWTTMIAG 217



 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 45/112 (40%), Positives = 72/112 (64%)
 Frame = +3

Query: 36  DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 215
           D   ++N+      I  LSR G++ EAR LFD+ PER+VV+W  +I+GY +   + EA  
Sbjct: 201 DQMPEKNVVSWTTMIAGLSRNGRVEEARTLFDRTPERNVVSWNAMITGYTQNSRLDEAFE 260

Query: 216 LFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           LF+ +  +K V +W  +I G+I++ ++  A  LF +M  ++VVSW+TMI+GY
Sbjct: 261 LFE-IMPEKIVSSWNTMIMGFIQNGELGRARILFDKMRQRDVVSWSTMINGY 311



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 36/97 (37%), Positives = 62/97 (63%)
 Frame = +3

Query: 36  DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 215
           D T ++N+   N  IT  ++  ++ EA +LF+ MPE+ V +W T+I G+I+ G +  AR 
Sbjct: 232 DRTPERNVVSWNAMITGYTQNSRLDEAFELFEIMPEKIVSSWNTMIMGFIQNGELGRARI 291

Query: 216 LFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQM 326
           LFDK+  +++VV+W+ +I GY+   +  EA + F +M
Sbjct: 292 LFDKMR-QRDVVSWSTMINGYMLKGRSEEALRNFCEM 327


>ref|XP_002529164.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531388|gb|EEF33223.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 453

 Score =  148 bits (374), Expect = 7e-34
 Identities = 70/124 (56%), Positives = 93/124 (75%), Gaps = 6/124 (4%)
 Frame = +3

Query: 15  KIFTTDRDHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCG 194
           +I   D  H+    ++R NW ITKL REGKI EARQ+FD+M ERDV+TWTTVI+GYIKC 
Sbjct: 41  RISLPDGHHSASSEVARFNWHITKLCREGKINEARQVFDRMLERDVITWTTVITGYIKCR 100

Query: 195 LVKEARFLFDKVNAKKNVVTWTALIAGYIRSNQISEAE------KLFVQMPDKNVVSWNT 356
           L+ EAR LFD+ +A KNVVTWTA+++GY+R NQ+ EAE      +LF +MP ++V+SW  
Sbjct: 101 LIVEARRLFDRADAMKNVVTWTAMVSGYMRLNQVLEAERVDEARRLFDEMPKRDVISWTA 160

Query: 357 MISG 368
           M++G
Sbjct: 161 MVAG 164



 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 44/98 (44%), Positives = 72/98 (73%)
 Frame = +3

Query: 78  ITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNAKKNVVTW 257
           +  L+R G+I EAR++FD+MPER+VV+W  +I+GY K   + EA  LF+++  ++++ +W
Sbjct: 162 VAGLARNGRIDEARKIFDKMPERNVVSWNAMITGYAKNMRLVEAFELFERM-PERDLPSW 220

Query: 258 TALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
             +I G+I++ ++  A KL  +MP+KNVVSW TMI+GY
Sbjct: 221 NTMITGFIQNKELKLARKLLDEMPEKNVVSWTTMITGY 258



 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 39/108 (36%), Positives = 70/108 (64%)
 Frame = +3

Query: 3   NKPNKIFTTDRDHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGY 182
           ++  KIF    D   ++N+   N  IT  ++  +++EA +LF++MPERD+ +W T+I+G+
Sbjct: 172 DEARKIF----DKMPERNVVSWNAMITGYAKNMRLVEAFELFERMPERDLPSWNTMITGF 227

Query: 183 IKCGLVKEARFLFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQM 326
           I+   +K AR L D++  +KNVV+WT +I GY++  +   A  +F++M
Sbjct: 228 IQNKELKLARKLLDEM-PEKNVVSWTTMITGYVQEGESEAALNIFMEM 274


>ref|XP_002881370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327209|gb|EFH57629.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 627

 Score =  147 bits (370), Expect = 2e-33
 Identities = 66/105 (62%), Positives = 87/105 (82%)
 Frame = +3

Query: 57  ISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNA 236
           + R  W I KL + GK+ EAR+LFD +PERDVVTWT VI+GYIK G ++EAR LFD+V++
Sbjct: 46  VPRPEWLIGKLCKVGKLAEARKLFDGLPERDVVTWTDVITGYIKLGNMREARELFDRVDS 105

Query: 237 KKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +KNVVTWTA+++GY+RS Q+S AE LF +MP++N+VSWNTMI GY
Sbjct: 106 RKNVVTWTAMVSGYLRSKQLSVAETLFQEMPERNIVSWNTMIDGY 150



 Score =  100 bits (250), Expect = 2e-19
 Identities = 48/112 (42%), Positives = 75/112 (66%)
 Frame = +3

Query: 36  DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 215
           D   ++N    N  I  L + G+I EA  LF++MP +DV++WT ++ G  K G V EAR 
Sbjct: 164 DEMPERNTVSWNTMIKALVQRGRIDEAMNLFERMPIKDVISWTAMVDGLAKNGKVDEARR 223

Query: 216 LFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           LFD +  ++N+++W A+I GY  +N+I EA++LF  MP+++  SWNTMI+G+
Sbjct: 224 LFDCM-PERNIISWNAMITGYTYNNRIDEADQLFQVMPERDFASWNTMITGF 274



 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 43/108 (39%), Positives = 75/108 (69%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++NI   N  I   ++ G+I +A +LFD+MPER+ V+W T+I   ++ G + EA  LF++
Sbjct: 137 ERNIVSWNTMIDGYAQSGRIDKALELFDEMPERNTVSWNTMIKALVQRGRIDEAMNLFER 196

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +   K+V++WTA++ G  ++ ++ EA +LF  MP++N++SWN MI+GY
Sbjct: 197 MPI-KDVISWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGY 243



 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 42/95 (44%), Positives = 66/95 (69%)
 Frame = +3

Query: 87  LSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNAKKNVVTWTAL 266
           L++ GK+ EAR+LFD MPER++++W  +I+GY     + EA  LF +V  +++  +W  +
Sbjct: 212 LAKNGKVDEARRLFDCMPERNIISWNAMITGYTYNNRIDEADQLF-QVMPERDFASWNTM 270

Query: 267 IAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           I G+IR+ +I+ A  LF +MP KNV+SW  MI+GY
Sbjct: 271 ITGFIRNREINRACGLFDRMPQKNVISWTAMITGY 305



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 39/93 (41%), Positives = 60/93 (64%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++NI   N  IT  +   +I EA QLF  MPERD  +W T+I+G+I+   +  A  LFD+
Sbjct: 230 ERNIISWNAMITGYTYNNRIDEADQLFQVMPERDFASWNTMITGFIRNREINRACGLFDR 289

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQM 326
           +  +KNV++WTA+I GY+ + +  EA K+F +M
Sbjct: 290 M-PQKNVISWTAMITGYVENKENEEALKVFSKM 321


>ref|XP_004498123.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g35030, mitochondrial-like [Cicer arietinum]
          Length = 665

 Score =  145 bits (367), Expect = 4e-33
 Identities = 64/110 (58%), Positives = 90/110 (81%)
 Frame = +3

Query: 42  TIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLF 221
           +I   + R N+ I+ L ++GKI EAR++FD+M ERD+  WTT+ISGYIKCG++KEAR LF
Sbjct: 44  SISLEMKRCNFFISSLCKQGKIDEARKVFDEMSERDICLWTTMISGYIKCGMIKEARKLF 103

Query: 222 DKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           D+ +A+KNV+ WTA+++GY++ N+I EAE+LF +MP +NVVSWNTMI GY
Sbjct: 104 DRSDAEKNVIVWTAMVSGYVKLNRIEEAERLFYEMPVRNVVSWNTMIDGY 153



 Score =  103 bits (257), Expect = 2e-20
 Identities = 48/108 (44%), Positives = 79/108 (73%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++N+   N  IT L+  G+I +A+ +F +M ERDVV+WTT+++G  K G + +AR LFD+
Sbjct: 171 ERNVVSWNTIITALAHSGRIDDAQGIFSKMQERDVVSWTTMVAGLSKNGRIDDARELFDR 230

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +   +NVV+W A+I GY ++ ++ EA KLF +MP++++ SWNTMI+G+
Sbjct: 231 MPV-RNVVSWNAMITGYAQNGRLDEALKLFERMPERDMPSWNTMITGF 277



 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 41/98 (41%), Positives = 73/98 (74%)
 Frame = +3

Query: 78  ITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNAKKNVVTW 257
           +  LS+ G+I +AR+LFD+MP R+VV+W  +I+GY + G + EA  LF+++  ++++ +W
Sbjct: 212 VAGLSKNGRIDDARELFDRMPVRNVVSWNAMITGYAQNGRLDEALKLFERM-PERDMPSW 270

Query: 258 TALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
             +I G+I++  ++ AEKLF +MP KNV++W +M++GY
Sbjct: 271 NTMITGFIQNGDLNRAEKLFDEMPQKNVITWTSMMTGY 308



 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 44/107 (41%), Positives = 72/107 (67%)
 Frame = +3

Query: 51  QNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKV 230
           +N+   N  I   +R G+  EA  LF +MPER+VV+W T+I+     G + +A+ +F K+
Sbjct: 141 RNVVSWNTMIDGYARNGRTQEALDLFRRMPERNVVSWNTIITALAHSGRIDDAQGIFSKM 200

Query: 231 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
             +++VV+WT ++AG  ++ +I +A +LF +MP +NVVSWN MI+GY
Sbjct: 201 Q-ERDVVSWTTMVAGLSKNGRIDDARELFDRMPVRNVVSWNAMITGY 246



 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 37/89 (41%), Positives = 61/89 (68%)
 Frame = +3

Query: 102 KILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNAKKNVVTWTALIAGYI 281
           +I EA +LF +MP R+VV+W T+I GY + G  +EA  LF ++  ++NVV+W  +I    
Sbjct: 127 RIEEAERLFYEMPVRNVVSWNTMIDGYARNGRTQEALDLFRRM-PERNVVSWNTIITALA 185

Query: 282 RSNQISEAEKLFVQMPDKNVVSWNTMISG 368
            S +I +A+ +F +M +++VVSW TM++G
Sbjct: 186 HSGRIDDAQGIFSKMQERDVVSWTTMVAG 214



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 37/92 (40%), Positives = 64/92 (69%)
 Frame = +3

Query: 51  QNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKV 230
           +N+   N  IT  ++ G++ EA +LF++MPERD+ +W T+I+G+I+ G +  A  LFD++
Sbjct: 234 RNVVSWNAMITGYAQNGRLDEALKLFERMPERDMPSWNTMITGFIQNGDLNRAEKLFDEM 293

Query: 231 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQM 326
             +KNV+TWT+++ GY++     EA K+F +M
Sbjct: 294 -PQKNVITWTSMMTGYVQHGLSEEALKIFNKM 324



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 10/103 (9%)
 Frame = +3

Query: 69  NWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNAKKNV 248
           N  IT   + G +  A +LFD+MP+++V+TWT++++GY++ GL +EA  +F+K+ A   +
Sbjct: 271 NTMITGFIQNGDLNRAEKLFDEMPQKNVITWTSMMTGYVQHGLSEEALKIFNKMQANDGL 330

Query: 249 VTWTAL----------IAGYIRSNQISEAEKLFVQMPDKNVVS 347
              T            +AG I   QI +     V   + +VVS
Sbjct: 331 KPTTGTFVTVLGACSDLAGLIEGQQIHQMISKTVFQENNHVVS 373


>ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355478803|gb|AES60006.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 891

 Score =  145 bits (365), Expect = 7e-33
 Identities = 65/110 (59%), Positives = 89/110 (80%)
 Frame = +3

Query: 42  TIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLF 221
           T+   + R N+ I+KL REGK+ EAR++FD+M +RD   WTT+ISGYIKCGL+ EAR LF
Sbjct: 40  TLTSEMKRCNYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLF 99

Query: 222 DKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           D+ +A+K+V+ WTA+++GYI+ N+I EAE+LF +MP +NVVSWNTMI GY
Sbjct: 100 DRPDAQKSVIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGY 149



 Score =  102 bits (254), Expect = 5e-20
 Identities = 49/108 (45%), Positives = 79/108 (73%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++N+   N  +T L+  G+I +A +LF++M ERDVV+WTT+++G  K G V  AR +FDK
Sbjct: 167 ERNVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDK 226

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +  + NVV+W A+IAGY ++ +  EA KLF +MP++++ SWNTM++G+
Sbjct: 227 MPIR-NVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGF 273



 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 43/107 (40%), Positives = 72/107 (67%)
 Frame = +3

Query: 51  QNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKV 230
           +N+   N  I   +R G+  EA  LF +MPER+VV+W TV++    CG + +A  LF+++
Sbjct: 137 RNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTVMTALAHCGRIDDAERLFNEM 196

Query: 231 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
             +++VV+WT ++AG  ++ ++  A ++F +MP +NVVSWN MI+GY
Sbjct: 197 R-ERDVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVVSWNAMIAGY 242



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 37/98 (37%), Positives = 69/98 (70%)
 Frame = +3

Query: 78  ITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNAKKNVVTW 257
           +  LS+ G++  AR++FD+MP R+VV+W  +I+GY + G   EA  LF+++  ++++ +W
Sbjct: 208 VAGLSKNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERM-PERDMPSW 266

Query: 258 TALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
             ++ G+I++  ++ AE+LF  MP KNV++W  M++GY
Sbjct: 267 NTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGY 304



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 37/89 (41%), Positives = 62/89 (69%)
 Frame = +3

Query: 102 KILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNAKKNVVTWTALIAGYI 281
           +I EA +LF++MP R+VV+W T+I GY + G  +EA  LF ++  ++NVV+W  ++    
Sbjct: 123 RIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRM-PERNVVSWNTVMTALA 181

Query: 282 RSNQISEAEKLFVQMPDKNVVSWNTMISG 368
              +I +AE+LF +M +++VVSW TM++G
Sbjct: 182 HCGRIDDAERLFNEMRERDVVSWTTMVAG 210



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 36/92 (39%), Positives = 60/92 (65%)
 Frame = +3

Query: 51  QNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKV 230
           +N+   N  I   ++ G+  EA +LF++MPERD+ +W T+++G+I+ G +  A  LF  +
Sbjct: 230 RNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHAM 289

Query: 231 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQM 326
             +KNV+TWTA++ GY++     EA KLF +M
Sbjct: 290 -PQKNVITWTAMMTGYVQHGLSEEALKLFNKM 320


>ref|XP_006587960.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like isoform X2 [Glycine max]
           gi|571479769|ref|XP_006587961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like isoform X3 [Glycine max]
           gi|571479771|ref|XP_003533693.2| PREDICTED:
           pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like isoform X1 [Glycine max]
          Length = 618

 Score =  144 bits (363), Expect = 1e-32
 Identities = 66/119 (55%), Positives = 94/119 (78%)
 Frame = +3

Query: 15  KIFTTDRDHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCG 194
           ++ +T   HT    + R N  I++L REG+I  AR++F++MPERD+  WTT+I+GY+KCG
Sbjct: 27  RLASTSNLHT---EMKRCNLFISRLCREGEIDYARKVFEEMPERDIGLWTTMITGYLKCG 83

Query: 195 LVKEARFLFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +++EAR LFD+ +AKKNVVTWTA++ GYI+ NQ+ EAE+LF +MP +NVVSWNTM+ GY
Sbjct: 84  MIREARKLFDRWDAKKNVVTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGY 142



 Score =  106 bits (264), Expect = 4e-21
 Identities = 50/108 (46%), Positives = 82/108 (75%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++N+   N  IT L + G+I +A++LFDQM +RDVV+WTT+++G  K G V++AR LFD+
Sbjct: 160 ERNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARALFDQ 219

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +   +NVV+W A+I GY ++ ++ EA +LF +MP++++ SWNTMI+G+
Sbjct: 220 MPV-RNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGF 266



 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 44/107 (41%), Positives = 74/107 (69%)
 Frame = +3

Query: 51  QNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKV 230
           +N+   N  +   +R G   +A  LF +MPER+VV+W T+I+  ++CG +++A+ LFD++
Sbjct: 130 RNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIITALVQCGRIEDAQRLFDQM 189

Query: 231 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
              ++VV+WT ++AG  ++ ++ +A  LF QMP +NVVSWN MI+GY
Sbjct: 190 K-DRDVVSWTTMVAGLAKNGRVEDARALFDQMPVRNVVSWNAMITGY 235



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 37/89 (41%), Positives = 64/89 (71%)
 Frame = +3

Query: 102 KILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNAKKNVVTWTALIAGYI 281
           ++ EA +LF +MP R+VV+W T++ GY + GL ++A  LF ++  ++NVV+W  +I   +
Sbjct: 116 QVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRM-PERNVVSWNTIITALV 174

Query: 282 RSNQISEAEKLFVQMPDKNVVSWNTMISG 368
           +  +I +A++LF QM D++VVSW TM++G
Sbjct: 175 QCGRIEDAQRLFDQMKDRDVVSWTTMVAG 203


>ref|NP_181048.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75099187|sp|O64766.1|PP185_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g35030, mitochondrial; Flags: Precursor
           gi|3033399|gb|AAC12843.1| hypothetical protein
           [Arabidopsis thaliana] gi|209414526|gb|ACI46503.1|
           At2g35030 [Arabidopsis thaliana]
           gi|330253957|gb|AEC09051.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  144 bits (362), Expect = 2e-32
 Identities = 66/105 (62%), Positives = 87/105 (82%)
 Frame = +3

Query: 57  ISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNA 236
           + +  W I +L + GKI EAR+LFD +PERDVVTWT VI+GYIK G ++EAR LFD+V++
Sbjct: 46  VPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDS 105

Query: 237 KKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +KNVVTWTA+++GY+RS Q+S AE LF +MP++NVVSWNTMI GY
Sbjct: 106 RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGY 150



 Score =  105 bits (263), Expect = 5e-21
 Identities = 50/112 (44%), Positives = 77/112 (68%)
 Frame = +3

Query: 36  DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 215
           D   ++NI   N  +  L + G+I EA  LF++MP RDVV+WT ++ G  K G V EAR 
Sbjct: 164 DEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARR 223

Query: 216 LFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           LFD +  ++N+++W A+I GY ++N+I EA++LF  MP+++  SWNTMI+G+
Sbjct: 224 LFDCM-PERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGF 274



 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 40/108 (37%), Positives = 77/108 (71%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++N+   N  I   ++ G+I +A +LFD+MPER++V+W +++   ++ G + EA  LF++
Sbjct: 137 ERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFER 196

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +  +++VV+WTA++ G  ++ ++ EA +LF  MP++N++SWN MI+GY
Sbjct: 197 M-PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGY 243



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 37/93 (39%), Positives = 60/93 (64%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++NI   N  IT  ++  +I EA QLF  MPERD  +W T+I+G+I+   + +A  LFD+
Sbjct: 230 ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDR 289

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQM 326
           +  +KNV++WT +I GY+ + +  EA  +F +M
Sbjct: 290 M-PEKNVISWTTMITGYVENKENEEALNVFSKM 321


>ref|XP_007161435.1| hypothetical protein PHAVU_001G068400g [Phaseolus vulgaris]
           gi|561034899|gb|ESW33429.1| hypothetical protein
           PHAVU_001G068400g [Phaseolus vulgaris]
          Length = 616

 Score =  142 bits (357), Expect = 6e-32
 Identities = 63/105 (60%), Positives = 87/105 (82%)
 Frame = +3

Query: 57  ISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNA 236
           + R N  I +L  +GKI +AR++FD+M +RD+  WTT+I+GY+KCG+++EAR LFD+++A
Sbjct: 35  MKRCNLLIFRLCEDGKIDDARKVFDKMLDRDIGLWTTMINGYLKCGMIREARKLFDRLDA 94

Query: 237 KKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           KKNVVTWTA+I GYIR NQ+ EAE+LF +MP +NVVSWNTM+ GY
Sbjct: 95  KKNVVTWTAMIKGYIRLNQVKEAERLFYEMPLRNVVSWNTMVDGY 139



 Score =  107 bits (268), Expect = 1e-21
 Identities = 50/108 (46%), Positives = 82/108 (75%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++N+   N  IT L + GK+ +A++LFDQM ERDVV+WTT+++G  K G V++AR LFD+
Sbjct: 157 ERNVVSWNTIITTLVQCGKVDDAQRLFDQMKERDVVSWTTMVAGLSKNGRVEDARALFDQ 216

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +   +NVV+W  ++ GY ++ +++EA +LF +MP++N+ SWNTMI+G+
Sbjct: 217 MPV-RNVVSWNVMVTGYAQNGRLNEALELFQRMPERNMPSWNTMITGF 263



 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 44/107 (41%), Positives = 74/107 (69%)
 Frame = +3

Query: 51  QNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKV 230
           +N+   N  +   +R G   +A  LF +MPER+VV+W T+I+  ++CG V +A+ LFD++
Sbjct: 127 RNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIITTLVQCGKVDDAQRLFDQM 186

Query: 231 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
             +++VV+WT ++AG  ++ ++ +A  LF QMP +NVVSWN M++GY
Sbjct: 187 K-ERDVVSWTTMVAGLSKNGRVEDARALFDQMPVRNVVSWNVMVTGY 232



 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 41/112 (36%), Positives = 75/112 (66%)
 Frame = +3

Query: 36  DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 215
           D   ++++      +  LS+ G++ +AR LFDQMP R+VV+W  +++GY + G + EA  
Sbjct: 184 DQMKERDVVSWTTMVAGLSKNGRVEDARALFDQMPVRNVVSWNVMVTGYAQNGRLNEALE 243

Query: 216 LFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           LF ++  ++N+ +W  +I G+I++ +++ AEKLF +M  KNV++W  M++GY
Sbjct: 244 LFQRM-PERNMPSWNTMITGFIQNGELNHAEKLFREMRVKNVITWTAMMTGY 294



 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 47/111 (42%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
 Frame = +3

Query: 36  DHTIDQNISRSNWQITKLSREGKILEARQLFDQM-PERDVVTWTTVISGYIKCGLVKEAR 212
           D  +D++I      I    + G I EAR+LFD++  +++VVTWT +I GYI+   VKEA 
Sbjct: 59  DKMLDRDIGLWTTMINGYLKCGMIREARKLFDRLDAKKNVVTWTAMIKGYIRLNQVKEAE 118

Query: 213 FLFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMIS 365
            LF ++   +NVV+W  ++ GY R+    +A  LF +MP++NVVSWNT+I+
Sbjct: 119 RLFYEM-PLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIIT 168



 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 36/92 (39%), Positives = 65/92 (70%)
 Frame = +3

Query: 93  REGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNAKKNVVTWTALIA 272
           R  ++ EA +LF +MP R+VV+W T++ GY + GL ++A  LF ++  ++NVV+W  +I 
Sbjct: 110 RLNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRM-PERNVVSWNTIIT 168

Query: 273 GYIRSNQISEAEKLFVQMPDKNVVSWNTMISG 368
             ++  ++ +A++LF QM +++VVSW TM++G
Sbjct: 169 TLVQCGKVDDAQRLFDQMKERDVVSWTTMVAG 200


>ref|XP_006410659.1| hypothetical protein EUTSA_v10016379mg [Eutrema salsugineum]
           gi|557111828|gb|ESQ52112.1| hypothetical protein
           EUTSA_v10016379mg [Eutrema salsugineum]
          Length = 626

 Score =  140 bits (354), Expect = 1e-31
 Identities = 63/105 (60%), Positives = 84/105 (80%)
 Frame = +3

Query: 57  ISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNA 236
           I R  W I KL +EG+I EAR++FD++P+RD  TWT VI+GYIK G ++EAR LFD+ +A
Sbjct: 45  IPRPEWLIKKLCKEGRIAEARKVFDRLPQRDEYTWTDVITGYIKLGNMREARELFDRADA 104

Query: 237 KKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +KNVVTWTA+++GY+R+ Q S AE LF +MP++N VSWNTMI GY
Sbjct: 105 RKNVVTWTAMVSGYLRAKQFSAAEMLFQEMPERNEVSWNTMIDGY 149



 Score =  102 bits (253), Expect = 7e-20
 Identities = 49/112 (43%), Positives = 75/112 (66%)
 Frame = +3

Query: 36  DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 215
           D   ++N    N  I  L++ G+I EA  LF++MP RDV++WT ++ G  K G V EAR 
Sbjct: 163 DEMPERNTVSWNTLIKALAQLGRIQEAMNLFERMPTRDVISWTAMVDGLGKNGKVDEARR 222

Query: 216 LFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           +FD +  ++N ++W A+I GY  +N+I EA++LF  MP++N  SWNTMI+G+
Sbjct: 223 VFDCM-PERNTISWNAMITGYAHNNRIEEADQLFQVMPERNFASWNTMITGF 273



 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 43/95 (45%), Positives = 66/95 (69%)
 Frame = +3

Query: 87  LSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNAKKNVVTWTAL 266
           L + GK+ EAR++FD MPER+ ++W  +I+GY     ++EA  LF +V  ++N  +W  +
Sbjct: 211 LGKNGKVDEARRVFDCMPERNTISWNAMITGYAHNNRIEEADQLF-QVMPERNFASWNTM 269

Query: 267 IAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           I G+IR+ +I+ A  LF +MP KNV+SW TMI+GY
Sbjct: 270 ITGFIRNGEINRACGLFDRMPQKNVISWTTMITGY 304



 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 39/101 (38%), Positives = 70/101 (69%)
 Frame = +3

Query: 69  NWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNAKKNV 248
           N  I   ++ G+I +A +LFD+MPER+ V+W T+I    + G ++EA  LF+++   ++V
Sbjct: 143 NTMIDGYAQSGRIDKALELFDEMPERNTVSWNTLIKALAQLGRIQEAMNLFERM-PTRDV 201

Query: 249 VTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
           ++WTA++ G  ++ ++ EA ++F  MP++N +SWN MI+GY
Sbjct: 202 ISWTAMVDGLGKNGKVDEARRVFDCMPERNTISWNAMITGY 242



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 36/93 (38%), Positives = 59/93 (63%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           ++N    N  IT  +   +I EA QLF  MPER+  +W T+I+G+I+ G +  A  LFD+
Sbjct: 229 ERNTISWNAMITGYAHNNRIEEADQLFQVMPERNFASWNTMITGFIRNGEINRACGLFDR 288

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQM 326
           +  +KNV++WT +I GY+++ +  +A K+F  M
Sbjct: 289 M-PQKNVISWTTMITGYVQNKENEDALKVFSNM 320


>gb|EYU18647.1| hypothetical protein MIMGU_mgv1a022303mg, partial [Mimulus
           guttatus]
          Length = 539

 Score =  129 bits (323), Expect = 5e-28
 Identities = 56/79 (70%), Positives = 72/79 (91%)
 Frame = +3

Query: 135 MPERDVVTWTTVISGYIKCGLVKEARFLFDKVNAKKNVVTWTALIAGYIRSNQISEAEKL 314
           MP+RDV++WT +ISGY+KCGLVKEAR LFD+ +AKK+VVTWT++I+GY++S +ISEAE+L
Sbjct: 1   MPDRDVISWTALISGYVKCGLVKEARELFDRADAKKDVVTWTSMISGYLKSKRISEAERL 60

Query: 315 FVQMPDKNVVSWNTMISGY 371
           F  MPDKNVV+WNTMI GY
Sbjct: 61  FHAMPDKNVVTWNTMIDGY 79



 Score =  101 bits (252), Expect = 9e-20
 Identities = 49/108 (45%), Positives = 70/108 (64%)
 Frame = +3

Query: 48  DQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDK 227
           D+N+   N  I    R G+I  A  +FD+M ER+VV+W TVISG + CG + EA   F +
Sbjct: 66  DKNVVTWNTMIDGYVRSGRIEHALTVFDEMGERNVVSWNTVISGLVNCGRIDEAMGFFSR 125

Query: 228 VNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWNTMISGY 371
              K NV++WT +I+G  R+ ++ EA  LF  +P++NVVSWN MI+GY
Sbjct: 126 TPLK-NVISWTIMISGLARNKRVDEARLLFDTVPERNVVSWNAMITGY 172



 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 39/89 (43%), Positives = 61/89 (68%)
 Frame = +3

Query: 102 KILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKVNAKKNVVTWTALIAGYI 281
           +I EA +LF  MP+++VVTW T+I GY++ G ++ A  +FD++  ++NVV+W  +I+G +
Sbjct: 53  RISEAERLFHAMPDKNVVTWNTMIDGYVRSGRIEHALTVFDEM-GERNVVSWNTVISGLV 111

Query: 282 RSNQISEAEKLFVQMPDKNVVSWNTMISG 368
              +I EA   F + P KNV+SW  MISG
Sbjct: 112 NCGRIDEAMGFFSRTPLKNVISWTIMISG 140



 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 44/107 (41%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
 Frame = +3

Query: 51  QNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARFLFDKV 230
           +N+      I+ L+R  ++ EAR LFD +PER+VV+W  +I+GY +   + EA  LF K+
Sbjct: 129 KNVISWTIMISGLARNKRVDEARLLFDTVPERNVVSWNAMITGYAQNTRLSEAYNLFKKM 188

Query: 231 NAKKNVVTWTALIAGYIRSNQISEAEKLFVQMP-DKNVVSWNTMISG 368
             +K+  +W A+I  +I++ ++ +A KLF +MP  KNVVSW  +ISG
Sbjct: 189 -PEKDAQSWNAMITAFIQNGELEKARKLFDEMPAGKNVVSWTAIISG 234



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 40/106 (37%), Positives = 67/106 (63%)
 Frame = +3

Query: 36  DHTIDQNISRSNWQITKLSREGKILEARQLFDQMPERDVVTWTTVISGYIKCGLVKEARF 215
           D   ++N+   N  IT  ++  ++ EA  LF +MPE+D  +W  +I+ +I+ G +++AR 
Sbjct: 155 DTVPERNVVSWNAMITGYAQNTRLSEAYNLFKKMPEKDAQSWNAMITAFIQNGELEKARK 214

Query: 216 LFDKVNAKKNVVTWTALIAGYIRSNQISEAEKLFVQMPDKNVVSWN 353
           LFD++ A KNVV+WTA+I+G ++S +  EA +LF  M   + V  N
Sbjct: 215 LFDEMPAGKNVVSWTAIISGLMQSGESEEALRLFYVMNKSSKVKPN 260