BLASTX nr result
ID: Akebia25_contig00045555
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00045555
(754 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007015351.1| Pentatricopeptide repeat-containing protein,... 142 1e-31
ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containi... 137 5e-30
emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera] 137 5e-30
gb|EXB70628.1| hypothetical protein L484_023813 [Morus notabilis] 126 9e-27
ref|XP_006437483.1| hypothetical protein CICLE_v10033975mg [Citr... 126 9e-27
gb|EYU37498.1| hypothetical protein MIMGU_mgv1a021373mg, partial... 121 2e-25
ref|XP_004246209.1| PREDICTED: pentatricopeptide repeat-containi... 121 3e-25
gb|AFK33630.1| unknown [Lotus japonicus] 118 3e-24
ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containi... 117 3e-24
ref|XP_002519945.1| pentatricopeptide repeat-containing protein,... 113 6e-23
ref|XP_004512307.1| PREDICTED: pentatricopeptide repeat-containi... 113 8e-23
ref|XP_007158057.1| hypothetical protein PHAVU_002G120500g [Phas... 111 3e-22
ref|XP_003612457.1| Pentatricopeptide repeat-containing protein ... 109 1e-21
ref|NP_174459.1| pentatricopeptide repeat-containing protein [Ar... 105 2e-20
ref|NP_001059279.1| Os07g0244400 [Oryza sativa Japonica Group] g... 105 2e-20
gb|EAZ03360.1| hypothetical protein OsI_25499 [Oryza sativa Indi... 104 4e-20
ref|XP_006415303.1| hypothetical protein EUTSA_v10009456mg [Eutr... 103 8e-20
ref|XP_006657585.1| PREDICTED: pentatricopeptide repeat-containi... 102 1e-19
ref|XP_003557346.1| PREDICTED: pentatricopeptide repeat-containi... 102 1e-19
ref|XP_002893686.1| pentatricopeptide repeat-containing protein ... 101 3e-19
>ref|XP_007015351.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao] gi|508785714|gb|EOY32970.1| Pentatricopeptide
repeat-containing protein, putative [Theobroma cacao]
Length = 413
Score = 142 bits (359), Expect = 1e-31
Identities = 74/151 (49%), Positives = 101/151 (66%), Gaps = 2/151 (1%)
Frame = -2
Query: 447 SNXXXXXXXTDVLRLMDSLQLSIPSDIYASLLKECTLSKDALRGAEVHAHINSTAHTPSL 268
SN +D+LRLMDSL L IP DIYASL+KECT+++ + R E+H+HI ++ PSL
Sbjct: 69 SNPCSSHTTSDILRLMDSLSLPIPPDIYASLVKECTVTRHSRRALELHSHIRNSRIKPSL 128
Query: 267 HLLNRLLLMYASCDRLHAARQLFDKIAIKDSVSWTTMIAAHADYGDHKQALNLFHQMRQN 88
LLNRLLLM+ SC L AR LFD++ ++D SW MI A GD +QA+ F +M ++
Sbjct: 129 PLLNRLLLMHVSCGHLDIARHLFDQMLLRDFNSWAIMIVACLHAGDSEQAIAYFVRMERH 188
Query: 87 GLEF--TNLIIICVLKACIHTSNFELGKQIH 1
L F + II+C+LK+C+ T N LGKQ+H
Sbjct: 189 NLLFKCPSWIIVCLLKSCVVTKNMGLGKQVH 219
>ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31790-like [Vitis vinifera]
Length = 414
Score = 137 bits (344), Expect = 5e-30
Identities = 73/145 (50%), Positives = 97/145 (66%), Gaps = 6/145 (4%)
Frame = -2
Query: 417 DVLRLMDSLQLSIPSDIYASLLKECTLSKDALRGAEVHAHINSTAHTPSLHLLNRLLLMY 238
D+LRLMD L L IP DIYASL+KE + + DA + ++ AHIN + S LLNR+LLMY
Sbjct: 63 DILRLMDGLGLPIPPDIYASLIKESSTTGDATQATQLLAHINRSGLPLSSALLNRILLMY 122
Query: 237 ASCDRLHAARQLFDKIAI--KDSVSWTTMIAAHADYGDHKQALNLFHQMRQNG----LEF 76
SC +H AR +FDK+ + K+S+SW M+AA+ D G +++A+ LF QM + LE
Sbjct: 123 VSCGLIHTARHMFDKMNVLNKNSISWAIMLAAYMDNGFYEEAIFLFVQMMELHSTIMLEL 182
Query: 75 TNLIIICVLKACIHTSNFELGKQIH 1
I ICVLKAC+HT N LGKQ+H
Sbjct: 183 PAWIFICVLKACVHTMNLTLGKQVH 207
>emb|CAN69066.1| hypothetical protein VITISV_016070 [Vitis vinifera]
Length = 543
Score = 137 bits (344), Expect = 5e-30
Identities = 73/145 (50%), Positives = 97/145 (66%), Gaps = 6/145 (4%)
Frame = -2
Query: 417 DVLRLMDSLQLSIPSDIYASLLKECTLSKDALRGAEVHAHINSTAHTPSLHLLNRLLLMY 238
D+LRLMD L L IP DIYASL+KE + + DA + ++ AHIN + S LLNR+LLMY
Sbjct: 226 DILRLMDGLGLPIPPDIYASLIKESSTTGDATQATQLLAHINRSGLPLSSALLNRILLMY 285
Query: 237 ASCDRLHAARQLFDKIAI--KDSVSWTTMIAAHADYGDHKQALNLFHQMRQNG----LEF 76
SC +H AR +FDK+ + K+S+SW M+AA+ D G +++A+ LF QM + LE
Sbjct: 286 VSCGLIHTARHMFDKMNVLNKNSISWAIMLAAYMDNGFYEEAIFLFVQMMELHSTIMLEL 345
Query: 75 TNLIIICVLKACIHTSNFELGKQIH 1
I ICVLKAC+HT N LGKQ+H
Sbjct: 346 PAWIFICVLKACVHTMNLTLGKQVH 370
>gb|EXB70628.1| hypothetical protein L484_023813 [Morus notabilis]
Length = 453
Score = 126 bits (316), Expect = 9e-27
Identities = 71/143 (49%), Positives = 92/143 (64%), Gaps = 4/143 (2%)
Frame = -2
Query: 417 DVLRLMDSLQLSIPSDIYASLLKECTLSKDALRGAEVHAHI--NSTAHTPSLHLLNRLLL 244
DVLRLMD+L L I D+Y S +KECT+S D ++H HI NS H +L LLNRLL
Sbjct: 108 DVLRLMDALCLPISPDMYISFMKECTISADFCGAEDLHNHISRNSLQHL-ALPLLNRLLF 166
Query: 243 MYASCDRLHAARQLFDKIAIKDSVSWTTMIAAHADYGDHKQALNLFHQMRQ--NGLEFTN 70
M SC RL A LF ++ KD SW TMI A+ + D+++A +LF +M N LEF +
Sbjct: 167 MNVSCGRLDLACDLFYRMPFKDFKSWATMIVANVNNSDYEEATSLFLKMLHHINMLEFPS 226
Query: 69 LIIICVLKACIHTSNFELGKQIH 1
II+C+LK C+ T N ELGKQ+H
Sbjct: 227 WIIVCLLKTCVCTRNMELGKQVH 249
Score = 57.8 bits (138), Expect = 4e-06
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Frame = -2
Query: 387 LSIPSDIYASLLKECTLSKDALRGAEVHAHINSTAHTPSLHLLNRLLLMYASCDRLHAAR 208
L PS I LLK C +++ G +VHA H SL+L + L+ Y L +A
Sbjct: 222 LEFPSWIIVCLLKTCVCTRNMELGKQVHACALKLGHANSLYLASCLINFYGKYGCLESAN 281
Query: 207 QLFDKIAIKDSVSWTTMIAAHADYGDHKQALNLFHQMRQNGLEFTNLIIICVLKAC--IH 34
+F+++ D+++W T + ++ + L F+++ + G++ L+ VLKAC IH
Sbjct: 282 LVFNQLPRHDTLTWMTRLINNSKEELFFEVLRDFNEVGKAGIKKNVLMFSSVLKACGRIH 341
Query: 33 TSNFELGKQIH 1
+ G+Q+H
Sbjct: 342 DRR-KSGQQVH 351
>ref|XP_006437483.1| hypothetical protein CICLE_v10033975mg [Citrus clementina]
gi|557539679|gb|ESR50723.1| hypothetical protein
CICLE_v10033975mg [Citrus clementina]
Length = 425
Score = 126 bits (316), Expect = 9e-27
Identities = 67/145 (46%), Positives = 93/145 (64%), Gaps = 6/145 (4%)
Frame = -2
Query: 417 DVLRLMDSLQLSIPSDIYASLLKECTLSKDALRGAEVHAHINSTAHT-PSLHLLNRLLLM 241
++L LMD+L L I +D+Y L+KECT KD+ E+ HI + P+L LNRLLLM
Sbjct: 71 NILHLMDNLCLPITTDMYTCLIKECTFQKDSAGAFELLNHIRKRVNIKPTLLFLNRLLLM 130
Query: 240 YASCDRLHAARQLFDKIAIKDSVSWTTMIAAHADYGDHKQALNLFHQM--RQNG---LEF 76
+ SC +L ARQLFD++ ++D SW MI + D D+++ + LF +M R+ G L F
Sbjct: 131 HVSCGQLDTARQLFDEMPLRDFNSWAVMIVGYVDVADYQECITLFAEMMKRKKGHMLLVF 190
Query: 75 TNLIIICVLKACIHTSNFELGKQIH 1
II+CVLKAC+ T N ELGKQ+H
Sbjct: 191 PAWIIVCVLKACVCTMNMELGKQVH 215
>gb|EYU37498.1| hypothetical protein MIMGU_mgv1a021373mg, partial [Mimulus
guttatus]
Length = 345
Score = 121 bits (304), Expect = 2e-25
Identities = 67/141 (47%), Positives = 91/141 (64%), Gaps = 10/141 (7%)
Frame = -2
Query: 393 LQLSIPSDIYASLLKECTLSKDALRGAEVHAHINSTAHTPSLHLLNRLLLMYASCDRLHA 214
L+L IP DIY SL+KECT D L+ E+H H+ + +L LLNRLLLMY S L
Sbjct: 1 LKLPIPPDIYTSLIKECTELGDPLKSIELHEHMRRSGFRFTLPLLNRLLLMYVSSGCLDR 60
Query: 213 ARQLFDKIAIKDSVSWTTMIAAHADYGDHKQALNLFHQM--RQN----GLEFTNL----I 64
ARQLFD++ ++D SW +IA + G+H +A+NLF +M RQ+ GL+ I
Sbjct: 61 ARQLFDQMFLRDFNSWAVLIAGFVENGEHDEAINLFVEMLNRQDMGNVGLDRMGFSVSGI 120
Query: 63 IICVLKACIHTSNFELGKQIH 1
++CVLKAC+ TS+FELG Q+H
Sbjct: 121 LVCVLKACLFTSDFELGTQVH 141
Score = 62.4 bits (150), Expect = 2e-07
Identities = 35/134 (26%), Positives = 64/134 (47%)
Frame = -2
Query: 402 MDSLQLSIPSDIYASLLKECTLSKDALRGAEVHAHINSTAHTPSLHLLNRLLLMYASCDR 223
+D + S+ S I +LK C + D G +VH + + S L L+ Y D
Sbjct: 110 LDRMGFSV-SGILVCVLKACLFTSDFELGTQVHGWLWKMGFSESASLSCFLINFYGRLDC 168
Query: 222 LHAARQLFDKIAIKDSVSWTTMIAAHADYGDHKQALNLFHQMRQNGLEFTNLIIICVLKA 43
A+ +FD + ++ WT+ I + G+ ++A+++F +M + G+ + VLKA
Sbjct: 169 FEGAQTVFDHVRNPNTAVWTSRIVSFCSNGNFEEAVSVFKEMGREGVRENSYTFSTVLKA 228
Query: 42 CIHTSNFELGKQIH 1
C + G+Q+H
Sbjct: 229 CRKMGDIRCGQQVH 242
>ref|XP_004246209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31790-like [Solanum lycopersicum]
Length = 465
Score = 121 bits (303), Expect = 3e-25
Identities = 65/141 (46%), Positives = 85/141 (60%), Gaps = 7/141 (4%)
Frame = -2
Query: 402 MDSLQLSIPSDIYASLLKECTLSKDALRGAEVHAHINSTAHTPSLHLLNRLLLMYASCDR 223
MDSL +IP D+Y SL+KECT S+D L EV+ H+ + PSL LLNRLLLM C
Sbjct: 1 MDSLGFNIPVDVYVSLIKECTESRDPLNAVEVYEHVCKSDVIPSLPLLNRLLLMLVLCGC 60
Query: 222 LHAARQLFDKIAIKDSVSWTTMIAAHADYGDHKQALNLFHQMRQN-------GLEFTNLI 64
ARQLFDK+ +++S SW MIA + G+ AL LF +M+ G + I
Sbjct: 61 FEQARQLFDKMRVRNSQSWAAMIAGCVENGECVGALRLFMEMQSEAGNLCKCGDLIDDGI 120
Query: 63 IICVLKACIHTSNFELGKQIH 1
++CVLKAC+ N E G+QIH
Sbjct: 121 LVCVLKACVELMNLEFGRQIH 141
>gb|AFK33630.1| unknown [Lotus japonicus]
Length = 356
Score = 118 bits (295), Expect = 3e-24
Identities = 65/154 (42%), Positives = 87/154 (56%), Gaps = 2/154 (1%)
Frame = -2
Query: 456 KKRSNXXXXXXXTDVLRLMDSLQLSIPSDIYASLLKECTLSKDALRGAEVHAHINSTAHT 277
KK+ + +L LMD L IP DIY SL+KECTLS D E+H HI +
Sbjct: 3 KKKKRKRKGATTSHILHLMDVLPFPIPIDIYTSLIKECTLSPDPQTAIELHTHIAHSGIK 62
Query: 276 PSLHLLNRLLLMYASCDRLHAARQLFDKIAIKDSVSWTTMIAAHADYGDHKQALNLFHQM 97
P L +NR+L+M+ SC L A QLFD + +KD SW T+ A+ D D+++A+++F M
Sbjct: 63 PPLSFINRILVMFVSCGLLDYACQLFDAMPVKDFNSWATLFIAYYDNADYEEAIDVFLAM 122
Query: 96 -RQNGL-EFTNLIIICVLKACIHTSNFELGKQIH 1
Q G+ EF I C LKAC N LG Q+H
Sbjct: 123 LHQLGMSEFPPWICACFLKACACIENIPLGMQVH 156
>ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31790-like [Glycine max]
Length = 423
Score = 117 bits (294), Expect = 3e-24
Identities = 61/154 (39%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Frame = -2
Query: 456 KKRSNXXXXXXXTDVLRLMDSLQLSIPSDIYASLLKECTLSKDALRGAEVHAHINSTAHT 277
KK+ +D+L LM++L +P DIY SL+KECT+S D E+ HI+ +
Sbjct: 70 KKKKKKRKGATTSDILHLMEALPFPVPIDIYTSLIKECTVSGDPETAIELATHISKSGIK 129
Query: 276 PSLHLLNRLLLMYASCDRLHAARQLFDKIAIKDSVSWTTMIAAHADYGDHKQALNLF-HQ 100
P L LNR+L+M+ SC L AR +FDK+ ++D +W T+ A+ D D+++A N+F +
Sbjct: 130 PPLPFLNRILVMFVSCGLLENARHMFDKMRVRDFNTWATLFVAYYDNTDYEEATNVFVNM 189
Query: 99 MRQNG-LEFTNLIIICVLKACIHTSNFELGKQIH 1
+ Q G +EF I C+L+AC T N LG Q+H
Sbjct: 190 LTQLGMMEFPPWIWACLLRACACTVNVPLGMQVH 223
>ref|XP_002519945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540991|gb|EEF42549.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 403
Score = 113 bits (283), Expect = 6e-23
Identities = 65/152 (42%), Positives = 93/152 (61%), Gaps = 13/152 (8%)
Frame = -2
Query: 417 DVLRLMDSLQLSIPSDIYASLLKECTLSKDALRGAEVHAHINSTAH---TPSLHLLNRLL 247
D++RLMDSL IP DIY SL+KECTL+ D+ +H+H+ S + TP L++RLL
Sbjct: 59 DIMRLMDSLCHPIPPDIYTSLIKECTLTSDSTEALCLHSHLISQTNLKLTPP--LVHRLL 116
Query: 246 LMYASCDRLHAARQLFDKIAI-KDSVSWTTMIAAHADYGDHKQALNLFHQMR-----QNG 85
LM+ SC +L AR LFDK+ + KD +SW +I ++ +NLF M +G
Sbjct: 117 LMHVSCGQLDIARNLFDKMPLKKDFISWVIVIVGCFSNSKYEAGINLFIDMLLQHSVYDG 176
Query: 84 LEFT----NLIIICVLKACIHTSNFELGKQIH 1
L F N+II+C++K CI++ N LGKQ+H
Sbjct: 177 LMFDLNTWNIIILCIIKCCIYSMNISLGKQVH 208
>ref|XP_004512307.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31790-like [Cicer arietinum]
Length = 418
Score = 113 bits (282), Expect = 8e-23
Identities = 63/155 (40%), Positives = 93/155 (60%), Gaps = 4/155 (2%)
Frame = -2
Query: 453 KRSNXXXXXXXTDVLRLMDSLQLSIPSDIYASLLKECTLSKDALRGAEVHAHINSTAHTP 274
K +N + +L LMD+L IP DIY SL+KECTLS D E+H+HI + P
Sbjct: 64 KNNNKRKSATTSHILPLMDALHFPIPIDIYTSLVKECTLSGDPETATELHSHITRSGIGP 123
Query: 273 SLHLLNRLLLMYASCDRLHAARQLFDKIAIKDSVSWTTMIAAHADYGDHKQALNLFHQM- 97
L LLNR+L+M+ SC L +AR +FD++ +++ SW + A+ + D++ A+++F +M
Sbjct: 124 PLTLLNRILIMFVSCGLLQSARHVFDEMPVRNFHSWAILFVAYYENSDYENAIDVFMRML 183
Query: 96 RQNG-LEFTNL--IIICVLKACIHTSNFELGKQIH 1
RQ G +EF L C+L AC T N LG Q+H
Sbjct: 184 RQLGVMEFPFLPWFWSCLLTACACTVNVPLGMQVH 218
>ref|XP_007158057.1| hypothetical protein PHAVU_002G120500g [Phaseolus vulgaris]
gi|561031472|gb|ESW30051.1| hypothetical protein
PHAVU_002G120500g [Phaseolus vulgaris]
Length = 420
Score = 111 bits (277), Expect = 3e-22
Identities = 57/141 (40%), Positives = 85/141 (60%), Gaps = 2/141 (1%)
Frame = -2
Query: 417 DVLRLMDSLQLSIPSDIYASLLKECTLSKDALRGAEVHAHINSTAHTPSLHLLNRLLLMY 238
D+L LMD+L I DIY SL+KECT+S D E++ HI+ + P L LNR+L+M+
Sbjct: 80 DILHLMDALPFPITIDIYTSLIKECTVSGDPETAIELYTHISKSDIKPPLPFLNRILIMF 139
Query: 237 ASCDRLHAARQLFDKIAIKDSVSWTTMIAAHADYGDHKQALNLFHQM--RQNGLEFTNLI 64
SC L AR +F+K+ ++D SW T+ A+ D ++++A +F M + L+F I
Sbjct: 140 VSCGMLENARHMFEKMRVRDFNSWATLFVAYYDNAEYEEATAVFVNMLGQLGMLQFPPWI 199
Query: 63 IICVLKACIHTSNFELGKQIH 1
C+L+AC T N LG Q+H
Sbjct: 200 WACLLRACACTLNVPLGLQVH 220
>ref|XP_003612457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513792|gb|AES95415.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 418
Score = 109 bits (272), Expect = 1e-21
Identities = 60/157 (38%), Positives = 88/157 (56%), Gaps = 4/157 (2%)
Frame = -2
Query: 459 PKKRSNXXXXXXXTDVLRLMDSLQLSIPSDIYASLLKECTLSKDALRGAEVHAHINSTAH 280
PKK + +L LMD+L I DIY SL+KECTLS D E+H I +
Sbjct: 62 PKKSKRRRKCDTTSHILPLMDALHFPITIDIYTSLVKECTLSTDPETAIELHTQIITRGI 121
Query: 279 TPSLHLLNRLLLMYASCDRLHAARQLFDKIAIKDSVSWTTMIAAHADYGDHKQALNLF-- 106
L LLNR+L+M+ SC L AR++FD ++++D SW T+ ++ + G+++ A+++F
Sbjct: 122 ELPLTLLNRILIMFVSCGLLENARRVFDVMSVRDFHSWATLFVSYYENGEYENAIDVFVS 181
Query: 105 --HQMRQNGLEFTNLIIICVLKACIHTSNFELGKQIH 1
Q+ G F I C+LKAC T N LG Q+H
Sbjct: 182 MLCQLDVMGFSFPPWIWSCLLKACACTMNVPLGMQVH 218
>ref|NP_174459.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169166|sp|Q9C6R9.1|PPR66_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g31790 gi|12321298|gb|AAG50719.1|AC079041_12
hypothetical protein [Arabidopsis thaliana]
gi|111074348|gb|ABH04547.1| At1g31790 [Arabidopsis
thaliana] gi|332193272|gb|AEE31393.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 409
Score = 105 bits (262), Expect = 2e-20
Identities = 57/143 (39%), Positives = 81/143 (56%), Gaps = 4/143 (2%)
Frame = -2
Query: 417 DVLRLMDSLQLSIPSDIYASLLKECTLSKDALRGAEVHAHINSTAHTPSLHLLNRLLLMY 238
D+LRLMDSL L DIY+ L KE D E+ HI ++ P++ +NRLLLM+
Sbjct: 74 DILRLMDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMH 133
Query: 237 ASCDRLHAARQLFDKIAIKDSVSWTTMIAAHADYGDHKQALNLFHQM----RQNGLEFTN 70
SC RL RQ+FD++ +D SW + + GD++ A LF M ++ + +
Sbjct: 134 VSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPS 193
Query: 69 LIIICVLKACIHTSNFELGKQIH 1
I+ CVLKAC +FELGKQ+H
Sbjct: 194 WILGCVLKACAMIRDFELGKQVH 216
>ref|NP_001059279.1| Os07g0244400 [Oryza sativa Japonica Group]
gi|24417179|dbj|BAC22540.1| putative pentatricopeptide
repeat-containing protein [Oryza sativa Japonica Group]
gi|50508329|dbj|BAD30147.1| putative pentatricopeptide
repeat-containing protein [Oryza sativa Japonica Group]
gi|113610815|dbj|BAF21193.1| Os07g0244400 [Oryza sativa
Japonica Group] gi|125599686|gb|EAZ39262.1| hypothetical
protein OsJ_23686 [Oryza sativa Japonica Group]
Length = 435
Score = 105 bits (261), Expect = 2e-20
Identities = 58/145 (40%), Positives = 87/145 (60%), Gaps = 6/145 (4%)
Frame = -2
Query: 417 DVLRLMDSLQLSIPSDIYASLLKECTLSKDALRGAEVHAHINSTAHTPSLHL--LNRLLL 244
DVLRL+D+L+L D+Y SLL++C DA A VHAHI L L NRL+L
Sbjct: 97 DVLRLLDALRLPPDEDVYVSLLRDCA---DAAEVASVHAHIAGKFAVSGLPLPLANRLVL 153
Query: 243 MYASCDRLHAARQLFDKIAIKDSVSWTTMIAAHADYGDHKQALNLF----HQMRQNGLEF 76
YA+C + AARQ+FD++ +K+ ++W TM++A++D H AL LF HQ+R +
Sbjct: 154 AYAACGDIGAARQVFDEMPVKNGITWATMVSAYSDGCFHHDALQLFVQMCHQVRGITGDH 213
Query: 75 TNLIIICVLKACIHTSNFELGKQIH 1
I+ VL++C + + G+Q+H
Sbjct: 214 YTHAIVAVLRSCARVNELQFGEQVH 238
>gb|EAZ03360.1| hypothetical protein OsI_25499 [Oryza sativa Indica Group]
Length = 436
Score = 104 bits (259), Expect = 4e-20
Identities = 58/145 (40%), Positives = 86/145 (59%), Gaps = 6/145 (4%)
Frame = -2
Query: 417 DVLRLMDSLQLSIPSDIYASLLKECTLSKDALRGAEVHAHINSTAHTPSLHL--LNRLLL 244
DVLRL+D+L+L D+Y SLL++C DA A VHAHI L L NRL+L
Sbjct: 98 DVLRLLDALRLPPDEDVYVSLLRDCA---DAAEVASVHAHIAGKFAVSGLPLPLANRLVL 154
Query: 243 MYASCDRLHAARQLFDKIAIKDSVSWTTMIAAHADYGDHKQALNLF----HQMRQNGLEF 76
YA+C + AARQ+FD+ +K+ ++W TM++A++D H AL LF HQ+R +
Sbjct: 155 AYAACGDIGAARQVFDETPVKNGITWATMVSAYSDGCFHHDALQLFAQMCHQVRGITGDH 214
Query: 75 TNLIIICVLKACIHTSNFELGKQIH 1
I+ VL++C + + G+Q+H
Sbjct: 215 YTHAIVAVLRSCARVNELQFGEQVH 239
>ref|XP_006415303.1| hypothetical protein EUTSA_v10009456mg [Eutrema salsugineum]
gi|557093074|gb|ESQ33656.1| hypothetical protein
EUTSA_v10009456mg [Eutrema salsugineum]
Length = 400
Score = 103 bits (256), Expect = 8e-20
Identities = 58/142 (40%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
Frame = -2
Query: 417 DVLRLMDSLQLSIPSDIYASLLKECTLSKDALRGAEVHAHINSTAHTPSLHLLNRLLLMY 238
D+LRLMDSL L D+Y+ L KE T D ++ HI +++ P LNRLLLM+
Sbjct: 75 DILRLMDSLSLPGNEDLYSCLAKESTTECDQRGAYDLQVHIMNSSVRPRTTFLNRLLLMH 134
Query: 237 ASCDRLHAARQLFDKIAIKDSVSWTTMIAAHADYGDHKQALNLFHQMRQNGLEFTNL--- 67
SC RL RQ+FDK+ +D SW +I + GD++ A+ LF M +N + +
Sbjct: 135 VSCGRLDITRQMFDKMPQRDFHSWAIVILGCIEMGDYQDAVFLFVSMLKNQNRVSKIPPW 194
Query: 66 IIICVLKACIHTSNFELGKQIH 1
I+ CVLKAC + +LGKQ+H
Sbjct: 195 IMGCVLKACGMIRDLDLGKQVH 216
>ref|XP_006657585.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Oryza brachyantha]
Length = 437
Score = 102 bits (255), Expect = 1e-19
Identities = 58/146 (39%), Positives = 86/146 (58%), Gaps = 7/146 (4%)
Frame = -2
Query: 417 DVLRLMDSLQLSIPSDIYASLLKECTLSKDALRGAEVHAHINSTAHTPSLHL--LNRLLL 244
DVLRL+D+L+L D+Y SLL++C DA A VHAHI + L L NRL+L
Sbjct: 99 DVLRLLDALRLPPDEDVYVSLLRDCA---DAAEVASVHAHIAGSLAVSGLPLPLANRLVL 155
Query: 243 MYASCDRLHAARQLFDKIAIKDSVSWTTMIAAHADYGDHKQALNLFHQMRQ-----NGLE 79
YA+C ARQ+FD++ +K+ ++W TM++A++D H AL LF QM G
Sbjct: 156 AYAACGDTGTARQVFDEMPVKNGITWATMVSAYSDGCFHHDALRLFAQMCHQVQGLTGDH 215
Query: 78 FTNLIIICVLKACIHTSNFELGKQIH 1
+T+ I+ VL++C + G+Q+H
Sbjct: 216 YTH-AIVAVLRSCARVDELDFGEQVH 240
>ref|XP_003557346.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31790-like [Brachypodium distachyon]
Length = 435
Score = 102 bits (254), Expect = 1e-19
Identities = 59/145 (40%), Positives = 85/145 (58%), Gaps = 6/145 (4%)
Frame = -2
Query: 417 DVLRLMDSLQLSIPSDIYASLLKECTLSKDALRGAEVHAHINSTAHTPSL--HLLNRLLL 244
DVLRLMD+LQ++ +Y SLL++ S DA A VHAHI L L NRLL
Sbjct: 97 DVLRLMDALQVAPDEAVYVSLLRD---SADAAEVAAVHAHIAGRRDAFGLLRPLANRLLH 153
Query: 243 MYASCDRLHAARQLFDKIAIKDSVSWTTMIAAHADYGDHKQALNLFHQMRQNGLEFT--- 73
YASC AAR++FD++ +KD ++W TM++A++D H +A+ LF +M E T
Sbjct: 154 SYASCGDTAAARKVFDEMPVKDDIAWATMVSAYSDGCFHNEAIRLFTRMCHEAQELTGDC 213
Query: 72 -NLIIICVLKACIHTSNFELGKQIH 1
+ I+ VL++C S G+Q+H
Sbjct: 214 HDRAIVAVLRSCARVSKISFGEQVH 238
>ref|XP_002893686.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297339528|gb|EFH69945.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 410
Score = 101 bits (251), Expect = 3e-19
Identities = 60/144 (41%), Positives = 80/144 (55%), Gaps = 5/144 (3%)
Frame = -2
Query: 417 DVLRLMDSLQLSIPSDIYASLLKECTLSKDALRGAEVHAHI-NSTAHTPSLHLLNRLLLM 241
D+LRLMDSL L D+Y+ L KE D E+ HI S+ P+ +NRLLLM
Sbjct: 74 DILRLMDSLSLPGNEDLYSCLAKESARENDRRGAYELQVHIMKSSIRRPTTTFVNRLLLM 133
Query: 240 YASCDRLHAARQLFDKIAIKDSVSWTTMIAAHADYGDHKQALNLFHQM---RQNG-LEFT 73
+ SC RL R +FDK+ +D SW + + GD++ A LF M QNG +
Sbjct: 134 HVSCGRLDITRHMFDKMPHRDFHSWAIVFLGCIEMGDYEDAALLFVSMLKHSQNGAFKIP 193
Query: 72 NLIIICVLKACIHTSNFELGKQIH 1
+ I+ CVLKAC +FELGKQ+H
Sbjct: 194 SWIMGCVLKACAMIRDFELGKQVH 217