BLASTX nr result

ID: Akebia25_contig00044536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00044536
         (261 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006339687.1| PREDICTED: histone H3-like centromeric prote...    65   8e-09
dbj|BAO51831.1| centromere specific histone H3 [Torenia fournier...    60   4e-07
dbj|BAH03514.1| centromere specific histone H3 variant [Nicotian...    59   5e-07
dbj|BAH03515.1| centromere specific histone H3 variant [Nicotian...    59   9e-07
ref|XP_007219168.1| hypothetical protein PRUPE_ppa016454mg, part...    58   1e-06
dbj|BAL42672.1| centromere specific histone H3 variant [Astragal...    57   2e-06
gb|EYU38902.1| hypothetical protein MIMGU_mgv1a023504mg [Mimulus...    57   3e-06
ref|XP_003528799.1| PREDICTED: histone H3-like centromeric prote...    56   5e-06

>ref|XP_006339687.1| PREDICTED: histone H3-like centromeric protein HTR12-like [Solanum
           tuberosum]
          Length = 147

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 40/86 (46%), Positives = 44/86 (51%)
 Frame = -3

Query: 259 ARTKHPAKRSRGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGTVALREIR 80
           ARTKH AKRSR +                                     PGTVALREIR
Sbjct: 2   ARTKHLAKRSRTKPSVAAGPSATPSTPTRKSPRSAPATSVQKPKQKKRYRPGTVALREIR 61

Query: 79  HFQKNWKLLIPAAPFIRIVREISNGF 2
           HFQK W L+IPAAPFIR+VREIS+ F
Sbjct: 62  HFQKTWNLVIPAAPFIRLVREISHFF 87


>dbj|BAO51831.1| centromere specific histone H3 [Torenia fournieri]
           gi|586941101|dbj|BAO51832.1| centromere specific histone
           H3 [Torenia baillonii]
          Length = 152

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = -3

Query: 106 GTVALREIRHFQKNWKLLIPAAPFIRIVREISNGF 2
           GTVALREIR +QK+W LLIPAAPFIR+V+EISN +
Sbjct: 58  GTVALREIRKYQKSWMLLIPAAPFIRVVKEISNHY 92


>dbj|BAH03514.1| centromere specific histone H3 variant [Nicotiana tabacum]
           gi|218744598|dbj|BAH03517.1| centromere specific histone
           H3 variant [Nicotiana tomentosiformis]
          Length = 156

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = -3

Query: 106 GTVALREIRHFQKNWKLLIPAAPFIRIVREISNGF 2
           GTVALREIR FQK W LLIPAAPFIR+V+EIS+ F
Sbjct: 62  GTVALREIRRFQKTWDLLIPAAPFIRLVKEISHFF 96


>dbj|BAH03515.1| centromere specific histone H3 variant [Nicotiana tabacum]
           gi|218744596|dbj|BAH03516.1| centromere specific histone
           H3 variant [Nicotiana sylvestris]
          Length = 157

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = -3

Query: 106 GTVALREIRHFQKNWKLLIPAAPFIRIVREISNGF 2
           GTVALREIR FQK W LLIPAAPFIR+V+EIS  F
Sbjct: 63  GTVALREIRRFQKTWNLLIPAAPFIRLVKEISYFF 97


>ref|XP_007219168.1| hypothetical protein PRUPE_ppa016454mg, partial [Prunus persica]
           gi|462415630|gb|EMJ20367.1| hypothetical protein
           PRUPE_ppa016454mg, partial [Prunus persica]
          Length = 123

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/33 (84%), Positives = 29/33 (87%)
 Frame = -3

Query: 106 GTVALREIRHFQKNWKLLIPAAPFIRIVREISN 8
           GTVALREIRHFQK   LLIPAAPFIR VRE+SN
Sbjct: 29  GTVALREIRHFQKTCSLLIPAAPFIRAVREVSN 61


>dbj|BAL42672.1| centromere specific histone H3 variant [Astragalus sinicus]
          Length = 122

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = -3

Query: 106 GTVALREIRHFQKNWKLLIPAAPFIRIVREISNGF 2
           GTVALREIRHFQK+  LLIPAAPFIR V++I+N F
Sbjct: 28  GTVALREIRHFQKSVNLLIPAAPFIRCVKQITNNF 62


>gb|EYU38902.1| hypothetical protein MIMGU_mgv1a023504mg [Mimulus guttatus]
          Length = 128

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = -3

Query: 106 GTVALREIRHFQKNWKLLIPAAPFIRIVREIS 11
           GTVALREIR +QK+W LLIPAAPFIR VREIS
Sbjct: 33  GTVALREIRKYQKSWNLLIPAAPFIRTVREIS 64


>ref|XP_003528799.1| PREDICTED: histone H3-like centromeric protein HTR12-like [Glycine
           max]
          Length = 158

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = -3

Query: 106 GTVALREIRHFQKNWKLLIPAAPFIRIVREISNGF 2
           GTVALREIRHFQ++ +LLIPAAPFIR V++I+N F
Sbjct: 64  GTVALREIRHFQRSCELLIPAAPFIRCVKQITNQF 98


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