BLASTX nr result
ID: Akebia25_contig00044421
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00044421
(425 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 73 5e-11
gb|ABW81094.1| RT6non-ltr [Cleome spinosa] 71 1e-10
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 66 4e-09
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 66 6e-09
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694... 65 7e-09
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 60 1e-08
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 63 4e-08
ref|XP_006362703.1| PREDICTED: probable protein phosphatase 2C 7... 63 5e-08
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 62 6e-08
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 62 8e-08
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 62 8e-08
ref|XP_004239600.1| PREDICTED: uncharacterized protein LOC101264... 61 1e-07
emb|CAN72867.1| hypothetical protein VITISV_020902 [Vitis vinifera] 61 1e-07
ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668... 60 3e-07
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 55 3e-07
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga... 60 4e-07
gb|ABD96948.1| hypothetical protein [Cleome spinosa] 59 5e-07
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 59 9e-07
gb|ABA95690.1| retrotransposon protein, putative, unclassified [... 59 9e-07
gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas... 59 9e-07
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 72.8 bits (177), Expect = 5e-11
Identities = 42/104 (40%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Frame = +3
Query: 3 GK*GLPQGDPLSPYLFVLVMEIL-----NPFSDPRLEKVSSTCTRDAPTFSFTDDLLVFF 167
G GL QGDPLSP LFV+ MEIL N FSD + + +F DDL++F+
Sbjct: 645 GSKGLRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPKASEVRISSLAFADDLMIFY 704
Query: 168 KANLKSARAIATSIREFGNLIGLEVNLDKSNVFITGIGKGGKRD 299
S R I + + F NL GLE+N +KS V+ G+ K D
Sbjct: 705 DGKASSLRGIKSVLESFKNLSGLEMNTEKSAVYTAGLEDTDKED 748
>gb|ABW81094.1| RT6non-ltr [Cleome spinosa]
Length = 459
Score = 71.2 bits (173), Expect = 1e-10
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Frame = +3
Query: 3 GK*GLPQGDPLSPYLFVLVMEILNPFSDPRLE----KVSSTCTRDAPT-FSFTDDLLVFF 167
GK GL QGDPLSPYLF++ ME+L+ D ++ S C T F DDL++F
Sbjct: 16 GKRGLRQGDPLSPYLFIIAMEVLSRKLDQAASIGQLQLHSKCANPLLTHLIFADDLVIFS 75
Query: 168 KANLKSARAIATSIREFGNLIGLEVNLDKSNVFITGIGKGGKRD 299
KA+ +S +A+ + FG GLEVN K +F+ G+ K++
Sbjct: 76 KASRQSMQAVQNCLNWFGRNSGLEVNTGKCEMFLGGLTDSEKQE 119
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 66.2 bits (160), Expect = 4e-09
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Frame = +3
Query: 12 GLPQGDPLSPYLFVLVMEILNPFSDPR-----LEKVSSTCTRDAPTFSFTDDLLVFFKAN 176
GL QGDPLSPYLFVL ME+ + R ++ T F DD++VFF
Sbjct: 650 GLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIQYHPKTADLSISHLMFADDVMVFFDGG 709
Query: 177 LKSARAIATSIREFGNLIGLEVNLDKSNVFITG 275
S I+ ++ +F + GL VN DK+N+++ G
Sbjct: 710 SSSLHGISEALDDFASWSGLHVNKDKTNLYLAG 742
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 65.9 bits (159), Expect = 6e-09
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Frame = +3
Query: 12 GLPQGDPLSPYLFVLVMEILNPFSDPRLEKV-----SSTCTRDAPTFSFTDDLLVFFKAN 176
GL QGDPLSPYLFVL ME+ + R + T F DD++VFF
Sbjct: 650 GLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIHYHPKTADLSISHLMFADDVMVFFDGG 709
Query: 177 LKSARAIATSIREFGNLIGLEVNLDKSNVFITG 275
S I+ ++ +F + GL VN DK+N+++ G
Sbjct: 710 SSSLHGISEALDDFASWSGLHVNKDKTNLYLAG 742
>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
putative protein [Arabidopsis thaliana]
Length = 1141
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Frame = +3
Query: 12 GLPQGDPLSPYLFVLVMEILNPFSDPRLEKVSSTCTRDAPTFS-----FTDDLLVFFKAN 176
GL QGDPLSPYLFVL ME+ + + R + A S F DD+++FF
Sbjct: 627 GLRQGDPLSPYLFVLAMEVFSKLLNSRFDSGYIRYHPKASDLSISHLMFADDVMIFFDGG 686
Query: 177 LKSARAIATSIREFGNLIGLEVNLDKSNVFITGI 278
S I ++ +F + GL+VN DKS+ F G+
Sbjct: 687 SSSLHGICETLEDFASWSGLKVNNDKSHFFCAGL 720
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 60.5 bits (145), Expect(2) = 1e-08
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Frame = +3
Query: 12 GLPQGDPLSPYLFVLVMEILNPFSDPRLEKVSSTCTR--------DAPTFSFTDDLLVFF 167
GL QGDPLSPYLFV+ ME+L+ R+ S C R + F DDLL+F
Sbjct: 476 GLRQGDPLSPYLFVIAMEVLSLCIQRRIN--CSPCFRYHWRCDQLNLSHLCFADDLLMFC 533
Query: 168 KANLKSARAIATSIREFGNLIGLEVNLDKSNVFITGI 278
+ S R + + F +L L+ N+ +S +F+ G+
Sbjct: 534 NGDENSVRTLHDAFSNFESLSSLKANVSESKIFLAGV 570
Score = 24.3 bits (51), Expect(2) = 1e-08
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 367 SRLSERDCQPLLERMNQKI 423
S+L +DC PLL+R+ +I
Sbjct: 601 SKLRMQDCSPLLDRIETRI 619
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 63.2 bits (152), Expect = 4e-08
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Frame = +3
Query: 12 GLPQGDPLSPYLFVLVMEILNPFSDPRLEKVSSTCTRDAPTFS-----FTDDLLVFFKAN 176
GL QGDPLSPYLFVL ME + R E A S F DD+++FF
Sbjct: 649 GLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSISHLMFADDVMIFFDGG 708
Query: 177 LKSARAIATSIREFGNLIGLEVNLDKSNVFITGIGK 284
S I ++ +F + GL+VN DKS++++ G+ +
Sbjct: 709 SFSLHGICETLDDFASWSGLKVNKDKSHLYLAGLNQ 744
>ref|XP_006362703.1| PREDICTED: probable protein phosphatase 2C 75-like [Solanum
tuberosum]
Length = 509
Score = 62.8 bits (151), Expect = 5e-08
Identities = 40/102 (39%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +3
Query: 3 GK*GLPQGDPLSPYLFVLVME----ILNPFSDPRLEKVSSTCTRDAPT-FSFTDDLLVFF 167
GK GL QGDP+SP LFVLVME +L S K C T F DDLL+F
Sbjct: 47 GKRGLRQGDPMSPLLFVLVMEYLSRVLKVMSASPYFKFHPMCKNLKLTHLVFADDLLIFC 106
Query: 168 KANLKSARAIATSIREFGNLIGLEVNLDKSNVFITGIGKGGK 293
+ R + ++ F + G+ N+DKSN+FI G + K
Sbjct: 107 SGKEQFVRRVMEALDHFTRVTGMIANMDKSNMFIAGTNEQTK 148
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Frame = +3
Query: 12 GLPQGDPLSPYLFVLVMEILNPF-----SDPRLEKVSSTCTRDAPTFSFTDDLLVFFKAN 176
GL QGDP+SP+LF + ME L+ D + D F DDLL+F + +
Sbjct: 448 GLRQGDPMSPFLFAIAMEYLSRLLKGLKEDKSFKYHPKYAKLDVTHLCFADDLLLFSRGD 507
Query: 177 LKSARAIATSIREFGNLIGLEVNLDKSNVFITGI 278
L S +A+ EF GL+ NL+KS+++ G+
Sbjct: 508 LNSIKALQKCFTEFSQASGLQANLNKSSIYCGGV 541
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Frame = +3
Query: 12 GLPQGDPLSPYLFVLVMEILNPFSDPRLEKVSSTCTRDAPTFS-----FTDDLLVFFKAN 176
GL QGDPLSPYLFVL ME+ + R + A S F DD+++FF
Sbjct: 509 GLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGG 568
Query: 177 LKSARAIATSIREFGNLIGLEVNLDKSNVFITGI 278
S I ++ +F + GL+VN DKS +F G+
Sbjct: 569 SSSMHGICETLDDFADWSGLKVNKDKSQLFQAGL 602
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Frame = +3
Query: 12 GLPQGDPLSPYLFVLVMEILNPFSDPRLEKVSSTCTRDAPTFS-----FTDDLLVFFKAN 176
GL QGDPLSPYLFVL ME+ + R + A S F DD+++FF
Sbjct: 509 GLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGG 568
Query: 177 LKSARAIATSIREFGNLIGLEVNLDKSNVFITGI 278
S I ++ +F + GL+VN DKS +F G+
Sbjct: 569 SSSMHGICETLDDFADWSGLKVNKDKSQLFQAGL 602
>ref|XP_004239600.1| PREDICTED: uncharacterized protein LOC101264629 [Solanum
lycopersicum]
Length = 261
Score = 61.2 bits (147), Expect = 1e-07
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Frame = +3
Query: 12 GLPQGDPLSPYLFVLVME----ILNPFSDPRLEKVSSTCTR-DAPTFSFTDDLLVFFKAN 176
GL QGDP+SP+LF + M+ +L + + + C++ D F DDLL+F + +
Sbjct: 138 GLRQGDPMSPFLFAIAMKYLSRLLKGLKEDKQFRYHPRCSKLDITHLCFADDLLMFARGD 197
Query: 177 LKSARAIATSIREFGNLIGLEVNLDKSNVFITGIGKGGKRD-----PYNLE 314
LKS +AI +F L+ NL KS+++ G+ + K YN+E
Sbjct: 198 LKSVKAIQLCFSQFSQASRLQANLSKSSIYCGGVQQEVKNQIVQQLGYNME 248
>emb|CAN72867.1| hypothetical protein VITISV_020902 [Vitis vinifera]
Length = 987
Score = 61.2 bits (147), Expect = 1e-07
Identities = 41/97 (42%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Frame = +3
Query: 12 GLPQGDPLSPYLFVLVMEILNP---------FSDPRLEKVSSTCTRDAPTFSFTDDLLVF 164
GL QGDPLS YLF+LVMEILN F + + SS RD F DD L+F
Sbjct: 300 GLRQGDPLSXYLFLLVMEILNQLLFRAKNGGFIEXFKVRSSSGVGRDLLXXLFADDTLLF 359
Query: 165 FKANLKSARAIATSIREFGNLIGLEVNLDKSNVFITG 275
KAN + R ++ F + GL+VN DKS G
Sbjct: 360 CKANSEQLRYLSWVFLWFEAISGLKVNRDKSEAIPVG 396
>ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668530 [Glycine max]
Length = 477
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Frame = +3
Query: 3 GK*GLPQGDPLSPYLFVLVMEI----LNPFSDPRLEKVSSTC-TRDAPTFSFTDDLLVFF 167
G+ GL QGDPL PYLFVL +E L D K TC +F DD+++
Sbjct: 82 GQHGLRQGDPLFPYLFVLCLEYFSCDLQSLKDNINFKFHPTCDVVQLSHLAFADDIMLLS 141
Query: 168 KANLKSARAIATSIREFGNLIGLEVNLDKSNVFITGI 278
+ +L S I ++ F N++GL +N +KS+++ G+
Sbjct: 142 RGDLPSVSTIFAKLQHFCNVLGLSINTNKSSIYSVGV 178
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 54.7 bits (130), Expect(2) = 3e-07
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Frame = +3
Query: 12 GLPQGDPLSPYLFVLVMEILNPFSDP----RLEKVSSTC-TRDAPTFSFTDDLLVFFKAN 176
GL QG LSPYLFV+ M++L+ D R C T SF DDL+V
Sbjct: 655 GLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLSDGK 714
Query: 177 LKSARAIATSIREFGNLIGLEVNLDKSNVFITGIGKGGKRD 299
++S I EF GL ++L+KS V++ G+ + +
Sbjct: 715 IRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNE 755
Score = 25.0 bits (53), Expect(2) = 3e-07
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 370 RLSERDCQPLLERMNQKI 423
RLS DC PLLE++ ++I
Sbjct: 780 RLSTTDCLPLLEQVRKRI 797
>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1363
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Frame = +3
Query: 12 GLPQGDPLSPYLFVLVMEILNPFSDPRLE-------KVSSTCTRDAPTFSFTDDLLVFFK 170
G+ QGDPLSPY+FVL ME L+ R+ K+SS + DD+ +F +
Sbjct: 636 GIRQGDPLSPYIFVLCMERLSMLISDRIRDGSWKPIKISSDL--GVSHIFYADDVFLFGQ 693
Query: 171 ANLKSARAIATSIREFGNLIGLEVNLDKS 257
A++++ I + EFGN+ GL VN+ KS
Sbjct: 694 ASVRNGGVIQNVLEEFGNISGLRVNMSKS 722
>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
Length = 539
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Frame = +3
Query: 3 GK*GLPQGDPLSPYLFVLVMEILNPFSD-----PRLEKVSSTCTRDAPTFSFTDDLLVFF 167
G+ GL QGDPLSPYLF++ ME+L+ D RL + +F DD+++F
Sbjct: 99 GRRGLRQGDPLSPYLFIMSMEVLSRMLDRCAAESRLSLHPKCHSPVITHLAFADDIMIFT 158
Query: 168 KANLKSARAIATSIREFGNLIGLEVNLDKSNVFITGI 278
+S + ++ F GL +N +K+ +F+ G+
Sbjct: 159 SGETRSLLEVKNTLDSFSRASGLYLNTEKTEIFLRGL 195
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +3
Query: 12 GLPQGDPLSPYLFVLVMEILNPFSDPR-----LEKVSSTCTRDAPTFSFTDDLLVFFKAN 176
GL QGDP+SPYLFVL ME+ + R + T + F DD+++FF
Sbjct: 546 GLRQGDPMSPYLFVLAMEVFSGLLQSRYTSGYIAYHPKTSQLEISHLMFADDVMIFFDGK 605
Query: 177 LKSARAIATSIREFGNLIGLEVNLDKSNVFITGIGK 284
S I S+ +F GL +N +K+ ++ G+ +
Sbjct: 606 SSSLHGIVESLEDFAGWSGLLMNTNKTQLYHAGLSQ 641
>gb|ABA95690.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1407
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +3
Query: 12 GLPQGDPLSPYLFVLVMEILNPFSDPRLEKVSSTCTRDAP--TFSFTDDLLVFFKANLKS 185
GL QGDPLSPYLF+LV ++L + R + D P T + DD L+ ++A
Sbjct: 332 GLRQGDPLSPYLFILVADVLQRLLE-RNASLRHPIYHDRPYATIQYADDTLIIYRAEEDD 390
Query: 186 ARAIATSIREFGNLIGLEVNLDKSN 260
RA+ +SI F GL +N K++
Sbjct: 391 VRALKSSILSFSKATGLHINFAKTS 415
>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
[Medicago truncatula]
Length = 869
Score = 58.5 bits (140), Expect = 9e-07
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Frame = +3
Query: 12 GLPQGDPLSPYLFVLVMEILNPFSDPRLEKVSSTCTR---DAPTFS---FTDDLLVFFKA 173
GL QGDPLSPYLF++ ME L+ + + + R +P S F DD+L+F KA
Sbjct: 194 GLRQGDPLSPYLFIICMEKLSLAINKAVHEGEWEPIRMSASSPPLSHLLFADDVLLFTKA 253
Query: 174 NLKSARAIATSIREFGNLIGLEVNLDKSNVFITGI 278
R I F +GL++NL KS F +G+
Sbjct: 254 KNSQLRFIKDLFDRFSKALGLKINLSKSRAFYSGV 288